BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00015305
         (2189 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]             602   e-169
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   601   e-169
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   586   e-164
ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chlorop...   578   e-162
ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citr...   578   e-162
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         577   e-162
ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   577   e-162
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   577   e-162
ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Popu...   570   e-160
ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [A...   570   e-160
ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chlorop...   569   e-159
ref|XP_004968658.1| PREDICTED: CRS2-associated factor 2, chlorop...   568   e-159
ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chlorop...   566   e-158
gb|EMJ28681.1| hypothetical protein PRUPE_ppa003604mg [Prunus pe...   563   e-157
ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm...   562   e-157
ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutr...   561   e-157
ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chlorop...   560   e-157
ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [S...   560   e-157
gb|EAY73777.1| hypothetical protein OsI_01650 [Oryza sativa Indi...   560   e-157
ref|NP_001105669.1| CRS2-associated factor 2, chloroplastic prec...   560   e-157

>gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]
          Length = 571

 Score =  602 bits (1552), Expect = e-169
 Identities = 317/550 (57%), Positives = 381/550 (69%), Gaps = 1/550 (0%)
 Frame = +1

Query: 187  SPPLPVPKRK-SPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXXX 363
            SPP+P+PK   S +  R  PPQ  P +S+  P   P PA KS H RS YYKP+  G    
Sbjct: 34   SPPIPIPKYPPSFKSQRRKPPQNVPQNSSKPP---PNPALKSVHRRSNYYKPVRDG--VI 88

Query: 364  XXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWTG 543
                            Y LPGAPFEFQ+SYSE PK +PLA+REPAFLPFAPP MPRPWTG
Sbjct: 89   ASDDGRSVVIGDSGVSYLLPGAPFEFQYSYSETPKVKPLAIREPAFLPFAPPTMPRPWTG 148

Query: 544  KAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVLG 723
            KAPL S           L              + MEM G    G Y    VR+++EE+LG
Sbjct: 149  KAPLKSAKEKKRNRKIPLLDSFNPPPRGTEGVKQMEMPGPFPFGKYPK--VRKTKEEILG 206

Query: 724  APLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDMD 903
             PL + E+K L+KPHLS NRQVNLGRDGLTHNMLELIHSHW+R  VCK+RC+GVPTVDMD
Sbjct: 207  EPLKKWEIKMLIKPHLSSNRQVNLGRDGLTHNMLELIHSHWKRTPVCKIRCKGVPTVDMD 266

Query: 904  NICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPEG 1083
            N+C H+E KT GKII+R GG V+LFRGRNY+   RP+YPVMLWKPAAPVYPKLIQE+P G
Sbjct: 267  NVCQHIENKTGGKIINRAGGAVYLFRGRNYNYANRPQYPVMLWKPAAPVYPKLIQEAPGG 326

Query: 1084 LTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKKL 1263
            LTK EA+ELR KG+ L PICKLAKNG+YI+LVKDVR AFEGS LVKI+C+GMHASDYKKL
Sbjct: 327  LTKDEANELRMKGKKLLPICKLAKNGVYISLVKDVRHAFEGSPLVKIDCKGMHASDYKKL 386

Query: 1264 GAKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTDTSDSDLKIPGKTNE 1443
            GAKLKELVPCVLLSFD EQILMWRG DWKS Y   +  + ++   D   SDL   GK N+
Sbjct: 387  GAKLKELVPCVLLSFDDEQILMWRGSDWKSMYRDVS--IPSILGNDVVTSDLHRSGKDND 444

Query: 1444 TTSECISRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEHSY 1623
             + +  ++   +SPKMLSLWKRA+ES KA+LL++    PD+LL +VEEFE ISQA EHSY
Sbjct: 445  DSGDPDTQTVRTSPKMLSLWKRALESNKAILLDEINLGPDALLMKVEEFEGISQATEHSY 504

Query: 1624 PALIVSASEGSDHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLDDTELSAVPFGSLP 1803
            PALIVS  +G+            SD++ND++   ++ YDE+  D   D++ S++P GSLP
Sbjct: 505  PALIVSGEDGTSSSMEESEYLSQSDDDNDDF---IDDYDEENDDVYYDSD-SSLPLGSLP 560

Query: 1804 VDRITRQLRQ 1833
            VD I ++  Q
Sbjct: 561  VDVIAKKFSQ 570


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
            gi|297739063|emb|CBI28552.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  601 bits (1550), Expect = e-169
 Identities = 324/580 (55%), Positives = 393/580 (67%), Gaps = 4/580 (0%)
 Frame = +1

Query: 100  MTLLSAVP---HLFSAXXXXXXXXXXXXXQTTSPPLPVPKRKSPRLPRIPPPQKAPSHST 270
            M +L+ +P    LFS+                 PP+P+PK         PPP K+   S 
Sbjct: 1    MVILATLPGSSSLFSSLPQGPPPNDSTTSTPPQPPIPIPK--------YPPPLKSQKSSR 52

Query: 271  PRPAQRPPPAFKSTHFRSRYYKPISHGDXXXXXXXXXXXXXXXXXXXYRLPGAPFEFQHS 450
            P P + P PAFK+ H RS+YYKP+S G                    Y LPGAPFEFQ S
Sbjct: 53   P-PTKPPTPAFKTVHHRSKYYKPVSDG--VIASDGDRSVVIGESGVSYLLPGAPFEFQFS 109

Query: 451  YSEVPKARPLAMREPAFLPFAPPEMPRPWTGKAPLLSXXXXXXXXXXXLXXXXXXXXXXX 630
            YSE PKA+PLA+REPAFLPFAPP MPRPWTGKAPL             L           
Sbjct: 110  YSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIP-----LFDSFNPPPPGT 164

Query: 631  MKGRVMEMKGRSVAGLYGSGSVRRSREEVLGAPLSRAEVKALVKPHLSHNRQVNLGRDGL 810
               + +EM G    G +      R+REE+LG PLS+AE++ LVKP+LSHNRQVNLGRDGL
Sbjct: 165  KGVKRVEMPGPFPLGKFPVEG--RTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGL 222

Query: 811  THNMLELIHSHWRRDQVCKVRCRGVPTVDMDNICYHLEEKTDGKIIHRIGGVVFLFRGRN 990
            THNMLELIHSHW+R +VCKVRC+GVPT+DMDN+C+HLEEKT GKIIHR+GGVV+LFRGRN
Sbjct: 223  THNMLELIHSHWKRQRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRN 282

Query: 991  YDPRTRPRYPVMLWKPAAPVYPKLIQESPEGLTKVEADELRRKGQNLPPICKLAKNGIYI 1170
            Y+ RTRP+YPVMLWKPAAPVYPKLIQE+PEGLTK EADELR KG+NL PIC+L KNG+YI
Sbjct: 283  YNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYI 342

Query: 1171 NLVKDVRDAFEGSQLVKINCEGMHASDYKKLGAKLKELVPCVLLSFDHEQILMWRGKDWK 1350
            +LVKDVRDAFEGS LVKI+C+GMHASDYKK+GAKLKELVPCVLLSFD EQIL WRG  WK
Sbjct: 343  SLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWK 402

Query: 1351 SRYH-MPAPLVSNLHRTDTSDSDLKIPGKTNETTSECISRKEISSPKMLSLWKRAIESQK 1527
            S Y   P+ L+  +    +      IP K+N    +  ++   +SPKM+SLWK AIES K
Sbjct: 403  SMYQGAPSFLIPVVADVASGLEGSGIP-KSNHHRLD--TKAVSASPKMMSLWKSAIESSK 459

Query: 1528 ALLLNDTPDSPDSLLERVEEFESISQAVEHSYPALIVSASEGSDHLKPGISERKTSDNNN 1707
            ALLL++T   PD+LL+ VEEFE ISQA EHSYPAL++S+ +G+   K       + D + 
Sbjct: 460  ALLLDETGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEYEGYNSEDYSE 519

Query: 1708 DEYDTDVESYDEDLRDPLDDTELSAVPFGSLPVDRITRQL 1827
            DE   D +  +  + + L++ E S VP GSLPVD + +QL
Sbjct: 520  DEMYNDDDDDEYLVNESLEEME-SPVPLGSLPVDLLAKQL 558


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  586 bits (1510), Expect = e-164
 Identities = 322/585 (55%), Positives = 389/585 (66%), Gaps = 9/585 (1%)
 Frame = +1

Query: 100  MTLLSAVP---HLFSAXXXXXXXXXXXXXQTTSPPLPVPKRKSPRLPRIPPPQKAPSHST 270
            M +L+ +P    LFS+                 PP+P+PK         PPP K  S  +
Sbjct: 1    MVILATLPGSSSLFSSLPQGPPPNASTTSTPPQPPIPIPK--------YPPPLK--SQKS 50

Query: 271  PRPAQRPP-PAFKSTHFRSRYYKPISHGDXXXXXXXXXXXXXXXXXXXYRLPGAPFEFQH 447
            PRP  +P  PAFK+ H RS+YYKP+S G                    Y L GAPFEFQ 
Sbjct: 51   PRPPTKPSTPAFKTVHHRSKYYKPVSDG--VIASDGDRSVVIGESGVSYLLAGAPFEFQF 108

Query: 448  SYSEVPKARPLAMREPAFLPFAPPEMPRPWTGKAPLLSXXXXXXXXXXXLXXXXXXXXXX 627
            SYSE PKA+PLA+REPAFLPFAPP MPRPWTGKAPL             L          
Sbjct: 109  SYSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIP-----LFDSFNPPPPG 163

Query: 628  XMKGRVMEMKGRSVAGLYGSGSVRRSREEVLGAPLSRAEVKALVKPHLSHNRQVNLGRDG 807
                + +EM G    G +      R+REE+LG PLS+AE++ LVKP+LSHNRQVNLGRDG
Sbjct: 164  TKGVKRVEMPGPFPLGKFPVEG--RTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDG 221

Query: 808  LTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDNICYHLEEKTDGKIIHRIGGVVFLFRGR 987
            LTHNMLELIHSHW+R +VCKV C+GVPT+DMDN+C+HLEEKT GKIIHR+GGVV+LFRGR
Sbjct: 222  LTHNMLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGR 281

Query: 988  NYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGLTKVEADELRRKGQNLPPICKLAKNGIY 1167
            NY+ RTRP+YPVMLWKPAAPVYPKLIQE+PEGLTK EADELR KG NL PIC+L KNG+Y
Sbjct: 282  NYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGXNLIPICRLVKNGVY 341

Query: 1168 INLVKDVRDAFEGSQLVKINCEGMHASDYKKLGAKLKELVPCVLLSFDHEQILMWRGKDW 1347
            I+LVKDVRDAFEGS LVKI+C+GMHASDYKK+GAKLKE VPCVLLSFD EQIL WRG  W
Sbjct: 342  ISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILTWRGHGW 401

Query: 1348 KSRYH----MPAPLVSNLHRTDTSDSDLKIPGKTNETTSECISRKEISSPKMLSLWKRAI 1515
            KS Y        P+V+++       S L+  G          ++   +SPKM+SLWK AI
Sbjct: 402  KSMYQGAPSFLIPVVADV------ASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAI 455

Query: 1516 ESQKALLLNDTPDSPDSLLERVEEFESISQAVEHSYPALIVSASEGSDHLKPGISERKTS 1695
            ES KALLL++    PD+LL+ VEEFE ISQA EHSYPAL++S+ +G+   K       + 
Sbjct: 456  ESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHEGYNSE 515

Query: 1696 DNNNDE-YDTDVESYDEDLRDPLDDTELSAVPFGSLPVDRITRQL 1827
            D + DE Y+ D + Y   + + L++ E S VP GSLPVD + +QL
Sbjct: 516  DYSEDEMYNDDDDEY--LVNESLEEME-SPVPLGSLPVDLLAKQL 557


>ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Citrus
            sinensis]
          Length = 552

 Score =  578 bits (1491), Expect = e-162
 Identities = 312/559 (55%), Positives = 373/559 (66%), Gaps = 15/559 (2%)
 Frame = +1

Query: 202  VPKRKSPRLPRIPPPQKAPSHSTPR-------PAQRPPPAFKSTHFRSRYYKPISHGDXX 360
            +P    PR PR+PPP   P    P+       P  RP PAFK  H  +RYYKP++ G   
Sbjct: 16   LPSTPPPRDPRLPPPSTPPPIPVPKYPPKEQKPKSRPNPAFKLPHRHTRYYKPVNPG--V 73

Query: 361  XXXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWT 540
                             YRLPGAPFEFQ+SY+E P+A+PLA+REPAFLPF PP MPRPWT
Sbjct: 74   IASDGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWT 133

Query: 541  GKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVL 720
            GK PL             L              + +EM G    G Y      ++REE+L
Sbjct: 134  GKQPLKKSKKKIP-----LFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQEG--KTREEIL 186

Query: 721  GAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDM 900
            G PL R E+  LVKP L  NRQVNLGRDGLTHNMLELIHSHW+R +V K++C+GVPTVDM
Sbjct: 187  GEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDM 246

Query: 901  DNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPE 1080
            DN+C  LEEKT GKII R+GG+V+LFRGRNY+ RTRP+YP+MLWKPAAPVYPKLIQE+PE
Sbjct: 247  DNVCRRLEEKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPE 306

Query: 1081 GLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKK 1260
            GLTK EADELRRKG++L PICKLAKNG+Y+ LV+DVR+AFEGS LVK+NC+GMHASDYKK
Sbjct: 307  GLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKK 366

Query: 1261 LGAKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTDTSDSDLKIPGKTN 1440
            LGAKLKELVPCVLLSFD EQILMWRGKDWKS Y  P P  SN       D D+      +
Sbjct: 367  LGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEP-PSFSN-----PVDLDIAGDADGS 420

Query: 1441 ETTSECISRKEI-SSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEH 1617
             T S+  S+  I SSPKM+SLWKRAIES KAL+L++    PD LL++VEEFE ISQA EH
Sbjct: 421  GTPSDDPSQGTIRSSPKMISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEH 480

Query: 1618 SYPALIVSASEGSDHLKPGISERKTSDNNN-------DEYDTDVESYDEDLRDPLDDTEL 1776
            SYPAL++S  +G+        +   S+N +       D+++ D E YD D  D       
Sbjct: 481  SYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPEDDFNDDDEFYDSDSSD------- 533

Query: 1777 SAVPFGSLPVDRITRQLRQ 1833
              VP GSLPVD I  +L++
Sbjct: 534  -VVPLGSLPVDHIAERLQR 551


>ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citrus clementina]
            gi|557540524|gb|ESR51568.1| hypothetical protein
            CICLE_v10031138mg [Citrus clementina]
          Length = 552

 Score =  578 bits (1491), Expect = e-162
 Identities = 312/559 (55%), Positives = 373/559 (66%), Gaps = 15/559 (2%)
 Frame = +1

Query: 202  VPKRKSPRLPRIPPPQKAPSHSTPR-------PAQRPPPAFKSTHFRSRYYKPISHGDXX 360
            +P    PR PR+PPP   P    P+       P  RP PAFK  H  +RYYKP++ G   
Sbjct: 16   LPSTPPPRDPRLPPPSTPPPIPVPKYPPKERKPKSRPNPAFKLPHRHTRYYKPVNPG--V 73

Query: 361  XXXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWT 540
                             YRLPGAPFEFQ+SY+E P+A+PLA+REPAFLPF PP MPRPWT
Sbjct: 74   ISSDGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWT 133

Query: 541  GKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVL 720
            GK PL             L              + +EM G    G Y      ++REE+L
Sbjct: 134  GKQPLKKSKKKIP-----LFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQEG--KTREEIL 186

Query: 721  GAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDM 900
            G PL R E+  LVKP L  NRQVNLGRDGLTHNMLELIHSHW+R +V K++C+GVPTVDM
Sbjct: 187  GEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDM 246

Query: 901  DNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPE 1080
            DN+C  LEEKT GKII R+GG+V+LFRGRNY+ RTRP+YP+MLWKPAAPVYPKLIQE+PE
Sbjct: 247  DNVCRRLEEKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPE 306

Query: 1081 GLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKK 1260
            GLTK EADELRRKG++L PICKLAKNG+Y+ LV+DVR+AFEGS LVK+NC+GMHASDYKK
Sbjct: 307  GLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKK 366

Query: 1261 LGAKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTDTSDSDLKIPGKTN 1440
            LGAKLKELVPCVLLSFD EQILMWRGKDWKS Y  P P  SN       D D+      +
Sbjct: 367  LGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEP-PSFSN-----PVDLDIAGDADGS 420

Query: 1441 ETTSECISRKEI-SSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEH 1617
             T S+  S+  I SSPKM+SLWKRAIES KAL+L++    PD LL++VEEFE ISQA EH
Sbjct: 421  GTPSDDPSQGTIRSSPKMISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEH 480

Query: 1618 SYPALIVSASEGSDHLKPGISERKTSDNNN-------DEYDTDVESYDEDLRDPLDDTEL 1776
            SYPAL++S  +G+        +   S+N +       D+++ D E YD D  D       
Sbjct: 481  SYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPEDDFNDDDEFYDSDSSD------- 533

Query: 1777 SAVPFGSLPVDRITRQLRQ 1833
              VP GSLPVD I  +L++
Sbjct: 534  -VVPLGSLPVDHIAERLQR 551


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  577 bits (1488), Expect = e-162
 Identities = 318/553 (57%), Positives = 376/553 (67%), Gaps = 4/553 (0%)
 Frame = +1

Query: 181  TTSPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXX 360
            T+SP  P+P      +P+ PPP K+ +  T  P + P PA K+ H RS+YYKP+  G   
Sbjct: 75   TSSPSTPIP------IPKYPPP-KSRTLRTNNPPKSPNPALKTFHRRSKYYKPVKDG--V 125

Query: 361  XXXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWT 540
                             Y LPGAPFEFQ+SYSE P  +P+A+REPAFLPFAPP MPRPWT
Sbjct: 126  ISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAIREPAFLPFAPPTMPRPWT 185

Query: 541  GKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVL 720
            GKAPL S           L              + +++ G    G Y      +SREE+L
Sbjct: 186  GKAPLKSSKKKIP-----LFDSFNPPPPGTKGVKQVQLPGPFPLGQYPKEG--KSREEIL 238

Query: 721  GAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDM 900
            G PL   E++ LVKPHLSHNRQVNLGRDGLTHNMLELIHSHW+R +VCKVRC+GVPTVDM
Sbjct: 239  GEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDM 298

Query: 901  DNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPE 1080
            DNIC+H+EEKT GKIIHR+GGV++LFRGRNY+ RTRP+YPVMLWKPAAPVYPKLIQE+PE
Sbjct: 299  DNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPE 358

Query: 1081 GLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKK 1260
            GLTK EA+ELR KG+NL PICKLAKNG+YI+LV DVR AFEGS LVKI+C GMH SDYKK
Sbjct: 359  GLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVKIDCTGMHESDYKK 418

Query: 1261 LGAKLKELVPCVLLSFDHEQILMWRGKDWKS--RYHMPAPLVSNLHRTDTSDSDLKIPGK 1434
            LGAKLKELVPCVLLSFD+EQILMWRGKDWKS       APL S   R  ++DS L   G+
Sbjct: 419  LGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPS---RASSNDS-LGSSGE 474

Query: 1435 TNETTSECISRKEI--SSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQA 1608
            + E +           +SPKM  LW+RAI+S KAL+L++   +PD LLERVEEFE ISQA
Sbjct: 475  SVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERVEEFERISQA 534

Query: 1609 VEHSYPALIVSASEGSDHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLDDTELSAVP 1788
             EHSYPA I S+ E S       S+  +  N N + D   E   EDL D +D      VP
Sbjct: 535  TEHSYPAFITSSEEVSSPADSPESQDHSEANYNSDDDVGRE---EDLFDNVD----PLVP 587

Query: 1789 FGSLPVDRITRQL 1827
             GSLPVD I ++L
Sbjct: 588  LGSLPVDIIAKKL 600


>ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Cucumis sativus]
          Length = 603

 Score =  577 bits (1487), Expect = e-162
 Identities = 316/553 (57%), Positives = 375/553 (67%), Gaps = 4/553 (0%)
 Frame = +1

Query: 181  TTSPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXX 360
            T+SP  P+P      +P+ PPP K+ +  T  P + P PA K+ H RS+YYKP+  G   
Sbjct: 75   TSSPSTPIP------IPKYPPP-KSRTLRTNNPPKPPNPALKTFHHRSKYYKPVKDG--V 125

Query: 361  XXXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWT 540
                             Y LPGAPFEFQ+SYSE PK +P+A+REPAFLPFAPP MPRPWT
Sbjct: 126  ISSNGERAVVIGDSGVSYHLPGAPFEFQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWT 185

Query: 541  GKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVL 720
            GKAPL S           L              +++++ G    G +      +SREE+L
Sbjct: 186  GKAPLKS-----SKKKIPLFDSFNPPPPGTKGVKLVQLPGPFPLGQHPKEG--KSREEIL 238

Query: 721  GAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDM 900
            G PL   E++ LVKPHLSHNRQVNLGRDGLTHNMLELIHSHW+R +VCKVRC+GVPTVDM
Sbjct: 239  GEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDM 298

Query: 901  DNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPE 1080
            DNIC+H+EEKT GKIIHR+GGV++LFRGRNY+ RTRP+YPVMLWKPAAPVYPKLIQE+PE
Sbjct: 299  DNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPE 358

Query: 1081 GLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKK 1260
            GLTK EA+ LR KG+NL PICKLAKNG+YI+LV DVR AFEGS LVKI+C GMH SDYKK
Sbjct: 359  GLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKK 418

Query: 1261 LGAKLKELVPCVLLSFDHEQILMWRGKDWKS--RYHMPAPLVSNLHRTDTSDSDLKIPGK 1434
            LGAKLKELVPCVLLSFD+EQILMWRGKDWKS       APL S   R  ++DS L  PG+
Sbjct: 419  LGAKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDCSAPLPS---RASSNDS-LGSPGE 474

Query: 1435 TNETTSECISRKEI--SSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQA 1608
            + E +           +SPKM  LW+ AI+S KALLL++   +PD LLE+VEEFE ISQA
Sbjct: 475  SLENSDLLHDNHHTIKTSPKMKLLWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQA 534

Query: 1609 VEHSYPALIVSASEGSDHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLDDTELSAVP 1788
             EHSYPA I S+ + S       S+  T  N N + D   E    D  DPL       VP
Sbjct: 535  TEHSYPAFITSSEDVSSPDDSPKSQDHTEANYNSDDDVGREEDLFDNADPL-------VP 587

Query: 1789 FGSLPVDRITRQL 1827
             GSLPVD I ++L
Sbjct: 588  LGSLPVDIIAKKL 600


>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Cucumis sativus]
          Length = 602

 Score =  577 bits (1487), Expect = e-162
 Identities = 316/553 (57%), Positives = 375/553 (67%), Gaps = 4/553 (0%)
 Frame = +1

Query: 181  TTSPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXX 360
            T+SP  P+P      +P+ PPP K+ +  T  P + P PA K+ H RS+YYKP+  G   
Sbjct: 74   TSSPSTPIP------IPKYPPP-KSRTLRTNNPPKPPNPALKTFHHRSKYYKPVKDG--V 124

Query: 361  XXXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWT 540
                             Y LPGAPFEFQ+SYSE PK +P+A+REPAFLPFAPP MPRPWT
Sbjct: 125  ISSNGERAVVIGDSGVSYHLPGAPFEFQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWT 184

Query: 541  GKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVL 720
            GKAPL S           L              +++++ G    G +      +SREE+L
Sbjct: 185  GKAPLKS-----SKKKIPLFDSFNPPPPGTKGVKLVQLPGPFPLGQHPKEG--KSREEIL 237

Query: 721  GAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDM 900
            G PL   E++ LVKPHLSHNRQVNLGRDGLTHNMLELIHSHW+R +VCKVRC+GVPTVDM
Sbjct: 238  GEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDM 297

Query: 901  DNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPE 1080
            DNIC+H+EEKT GKIIHR+GGV++LFRGRNY+ RTRP+YPVMLWKPAAPVYPKLIQE+PE
Sbjct: 298  DNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPE 357

Query: 1081 GLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKK 1260
            GLTK EA+ LR KG+NL PICKLAKNG+YI+LV DVR AFEGS LVKI+C GMH SDYKK
Sbjct: 358  GLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKK 417

Query: 1261 LGAKLKELVPCVLLSFDHEQILMWRGKDWKS--RYHMPAPLVSNLHRTDTSDSDLKIPGK 1434
            LGAKLKELVPCVLLSFD+EQILMWRGKDWKS       APL S   R  ++DS L  PG+
Sbjct: 418  LGAKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDRSAPLPS---RASSNDS-LGSPGE 473

Query: 1435 TNETTSECISRKEI--SSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQA 1608
            + E +           +SPKM  LW+ AI+S KALLL++   +PD LLE+VEEFE ISQA
Sbjct: 474  SLENSDLLHGNHHTIKTSPKMKLLWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQA 533

Query: 1609 VEHSYPALIVSASEGSDHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLDDTELSAVP 1788
             EHSYPA I S+ + S       S+  T  N N + D   E    D  DPL       VP
Sbjct: 534  TEHSYPAFITSSEDVSSPDDSPKSQDHTEANYNSDDDVGREEDLFDNADPL-------VP 586

Query: 1789 FGSLPVDRITRQL 1827
             GSLPVD I ++L
Sbjct: 587  LGSLPVDIIAKKL 599


>ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Populus trichocarpa]
            gi|550329113|gb|EEF01860.2| hypothetical protein
            POPTR_0010s05230g [Populus trichocarpa]
          Length = 557

 Score =  570 bits (1470), Expect = e-160
 Identities = 302/548 (55%), Positives = 368/548 (67%), Gaps = 2/548 (0%)
 Frame = +1

Query: 190  PPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXXXXX 369
            PP P+P      +P+ PPP K   +S         PAFK  H R++YYKP+  G      
Sbjct: 33   PPPPIP------IPKYPPPLKKSKNSAN-------PAFKIPHLRTKYYKPVKDGGGVIAS 79

Query: 370  XXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWTGKA 549
                          Y LPGAPFEFQ SYSE PK +PLA+REPAFLPFAPP MPRPWTGK 
Sbjct: 80   DGDRSVLVGDSGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKP 139

Query: 550  PLLSXXXXXXXXXXXLXXXXXXXXXXXMKG-RVMEMKGRSVAGLYGSGSVRRSREEVLGA 726
            PL +                        KG + +EM G    G +      +SREE+LG 
Sbjct: 140  PLKTSKKKIPVFDSF------NPPPAGKKGVKYVEMPGPYPFGKFPEEG--KSREEILGE 191

Query: 727  PLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDN 906
            PL   E+K L+KPHLS NRQVNLG DGLTHNMLEL+HSHW+R +VCKVRC+GVPTVDMDN
Sbjct: 192  PLKTWEIKLLIKPHLSDNRQVNLGEDGLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDN 251

Query: 907  ICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGL 1086
            +C HLEEKT GKIIHR+GGVV+LFRGRNY+ RTRP+YPVMLWKPA PVYPKLIQE+PEGL
Sbjct: 252  VCRHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGL 311

Query: 1087 TKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKKLG 1266
            TK +ADE R+KG+NL PICKLAKNG+YI LV+DVR AFEGS LVK++C+GM  SDYKKLG
Sbjct: 312  TKAQADEFRKKGKNLLPICKLAKNGVYITLVRDVRAAFEGSPLVKVDCKGMEPSDYKKLG 371

Query: 1267 AKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTDTSDSDLKIPGKTNET 1446
            AKLK+LVPCVLLSFD EQILMWRG+DWKS Y    P +S     D + S     GK+++ 
Sbjct: 372  AKLKDLVPCVLLSFDDEQILMWRGQDWKSMYPEARPSISFPAELDIA-SGSDDSGKSDDD 430

Query: 1447 TSECISRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEHSYP 1626
                 ++   SSPKM+ LWK A+ES KA+LL++    PD+LL +VEEFE ISQA EHSYP
Sbjct: 431  CDNSDAKILSSSPKMMLLWKHALESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSYP 490

Query: 1627 ALIVSASEGSDHLKPGISERKTSDN-NNDEYDTDVESYDEDLRDPLDDTELSAVPFGSLP 1803
            AL++S+ +GS +      +   S+N + D+  +D E YD    +  ++ E SA P GSL 
Sbjct: 491  ALVMSSEDGSSNSISTFEDDSHSENFSEDDMYSDDEYYDS---ESFEELETSAPP-GSLS 546

Query: 1804 VDRITRQL 1827
            +D I  +L
Sbjct: 547  IDLIAEKL 554


>ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [Amborella trichopoda]
            gi|548842028|gb|ERN01985.1| hypothetical protein
            AMTR_s00045p00074390 [Amborella trichopoda]
          Length = 570

 Score =  570 bits (1470), Expect = e-160
 Identities = 310/561 (55%), Positives = 372/561 (66%), Gaps = 14/561 (2%)
 Frame = +1

Query: 187  SPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXXXX 366
            SPPL     K P  P IP P+  P     R       AF++ H  + YYKP+S G     
Sbjct: 18   SPPLKNDAIKRPPNPPIPIPKYPPKKRQEREKSPLEKAFRAPHRGTNYYKPVSDG-VISA 76

Query: 367  XXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWTGK 546
                           Y +PGAPFEFQ SYSE PK +PLA+REPA LPFAPP M RPWTGK
Sbjct: 77   EEDGRSVVIGESGVSYLIPGAPFEFQFSYSETPKGKPLAIREPAHLPFAPPTMGRPWTGK 136

Query: 547  APLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVLGA 726
            APL                          K ++M M      G   S   +RSREE+LG+
Sbjct: 137  APLKKKKEKRKIKLFDSFDSLIAEEKNGEK-KMMHMLRPFEIG--ESMREKRSREEILGS 193

Query: 727  PLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDN 906
            P+ R EV+ALVKP LS+NRQVNLGRDGLTHNMLELIHSHWRR  VCKVRC+GVPTVDMDN
Sbjct: 194  PVKRGEVRALVKPCLSNNRQVNLGRDGLTHNMLELIHSHWRRQAVCKVRCKGVPTVDMDN 253

Query: 907  ICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGL 1086
            +C+HLEE+T GKII R+GGVV+LFRGRNYD RTRPRYP+MLWKPA PVYPKLIQE+PEGL
Sbjct: 254  VCHHLEERTRGKIILRMGGVVYLFRGRNYDHRTRPRYPIMLWKPATPVYPKLIQEAPEGL 313

Query: 1087 TKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKKLG 1266
            TK EADELR+KG+NL PICKLAKNG+YI LVKDVRDAFE S +VKINC+GMHASDYKKLG
Sbjct: 314  TKSEADELRKKGKNLLPICKLAKNGVYITLVKDVRDAFEASSIVKINCQGMHASDYKKLG 373

Query: 1267 AKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLV--------SNLHRTDTSDSDLK 1422
            AKLKELVPC+LLSFD EQILMWRG+DWKS Y    P V        SNL+ T    SD  
Sbjct: 374  AKLKELVPCILLSFDDEQILMWRGQDWKSMYQDTPPTVSGDNSTYYSNLNNTSLLSSD-D 432

Query: 1423 IPGKTNETTSECI------SRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVE 1584
              G  N  + + +      S  +I S +M+SLWK AIES+KAL L +    PD+LL++VE
Sbjct: 433  TTGAENLVSDQMVGLDVGASSPKIKSKRMMSLWKSAIESRKALFLEEINLDPDALLKKVE 492

Query: 1585 EFESISQAVEHSYPALIVSASEGSDHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLD 1764
            EF+++SQA+EHSYPA+++  +E        ISE  +S  + +  D D ++ D+D  +  +
Sbjct: 493  EFQNVSQAMEHSYPAVVLPEAEAGK-----ISEEDSSGKSWEFEDDDDDNDDDDSGEDFE 547

Query: 1765 DTELSAVPFGSLPVDRITRQL 1827
              +  +VP GSLPVD +  QL
Sbjct: 548  VID-ESVPLGSLPVDFLAEQL 567


>ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Brachypodium
            distachyon]
          Length = 607

 Score =  569 bits (1466), Expect = e-159
 Identities = 310/589 (52%), Positives = 382/589 (64%), Gaps = 41/589 (6%)
 Frame = +1

Query: 184  TSPPLPVPKRKSPR-------LPRIPPPQKAPSHSTPRPAQR---PP----------PAF 303
            +SPP P+P R +P+       LP +PP ++    S P+   R   PP          PAF
Sbjct: 20   SSPPAPLPNRHNPKNRSLPLPLPPLPPRRRRHPKSHPQQPSREQEPPMPAPRARDTNPAF 79

Query: 304  KSTHFRSRYYKPISHGDXXXXXXXXXXXXXXXXXXX--------YRLPGAPFEFQHSYSE 459
            +S H R+ Y KP+                               +RLPGAPF+FQ SYSE
Sbjct: 80   RSPHLRTAYRKPVPPAGKGEALLAANPTDAAAGRSVVVGPSGVTFRLPGAPFDFQFSYSE 139

Query: 460  VPKARPLAMREPAFLPFAPPEMPRPWTGKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMK- 636
             P+A PLA+REP FLPFAPP MPRPWTGKAPLL+           L           +  
Sbjct: 140  APRAAPLAIREPPFLPFAPPTMPRPWTGKAPLLTKEEKARRKGVRLHTPLGQESPQTVSP 199

Query: 637  -GRVMEMKGRSVA--GLYGSGSVRRSREEVLGAPLSRAEVKALVKPHLSHNRQVNLGRDG 807
             G +ME++GR     G    G  RR REEVLG PL+ AEV+ALVKPH+SHNRQ+N+GRDG
Sbjct: 200  HGIMMEVRGRRQLDLGRVSPGDGRR-REEVLGEPLTPAEVRALVKPHMSHNRQLNIGRDG 258

Query: 808  LTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDNICYHLEEKTDGKIIHRIGGVVFLFRGR 987
            LTHNMLE+IH HWRR ++CKVRCRGVPTVDM N+CYHLEEK+ GK+IHR+GGVVFL+RGR
Sbjct: 259  LTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGR 318

Query: 988  NYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGLTKVEADELRRKGQNLPPICKLAKNGIY 1167
            NY+PRTRPRYP+MLWKPA PVYPKLIQ +PEGLT  EA E+R +GQNL PI KLAKNGIY
Sbjct: 319  NYNPRTRPRYPLMLWKPATPVYPKLIQLAPEGLTIEEAAEMRIRGQNLLPIFKLAKNGIY 378

Query: 1168 INLVKDVRDAFEGSQLVKINCEGMHASDYKKLGAKLKELVPCVLLSFDHEQILMWRGKDW 1347
            +NLVKDVRDAFEG+ LVKINCEG+  SDYKK+GAKL++LVPC+LLSFD+EQIL++RGK+W
Sbjct: 379  LNLVKDVRDAFEGNDLVKINCEGLEPSDYKKIGAKLRDLVPCILLSFDNEQILIYRGKEW 438

Query: 1348 KSRYHMPAPLVSNLHRTDTSDSDLKIPGKTNETTSECISRKEISSPKMLSLWKRAIESQK 1527
            KSRY  P  L+  + ++D S S        +   S+ ++ +E+  P+M  LWKRAIES  
Sbjct: 439  KSRYSKPLTLIPKVQKSDLSVSSFASSSDESTDASDNVAIREVLRPRMFKLWKRAIESSI 498

Query: 1528 ALLLNDTPD---SPDSLLERVEEFESISQAVEHSYPALIVSASEGSDHLKPGISERKTSD 1698
            AL L+D      +PD+LL RVEEF   SQAVEHS+PAL+V  S   + +  G  E ++ D
Sbjct: 499  ALSLDDNEADALTPDALLARVEEFSITSQAVEHSFPALLVGNS--PEVVNAGYMEDESED 556

Query: 1699 N------NNDEYDTDVESYDEDLRDPLDDTELSAVPFGSLPVDRITRQL 1827
                   N  E   DV   D    D L+  E SA P GSLP+D +  QL
Sbjct: 557  ETGNPQVNQFEQSPDVSEDDPFEYDMLERLESSA-PLGSLPIDSVVDQL 604


>ref|XP_004968658.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Setaria
            italica]
          Length = 624

 Score =  568 bits (1463), Expect = e-159
 Identities = 311/612 (50%), Positives = 395/612 (64%), Gaps = 64/612 (10%)
 Frame = +1

Query: 184  TSPPLPVPKRKSPR-----LPRIPPPQKAPSHSTPRPA--QRPP------------PAFK 306
            ++PP P+  R+ P+     LP +PP ++ P +   +P+  Q P             PAF+
Sbjct: 21   SAPPPPLSNRRYPQHRSLPLPPVPPRRRHPKNHAEQPSEDQEPTDGGPRATTTTNNPAFR 80

Query: 307  STHFRSRYYKPI------SHGDXXXXXXXXXXXXXXXXXXX-----YRLPGAPFEFQHSY 453
            +TH R+ Y KP+        G+                        +RLPGAPF+FQ SY
Sbjct: 81   ATHLRTAYRKPVPPVAAAGEGEALLAADPADAASGRAVVVGPSGLSFRLPGAPFDFQFSY 140

Query: 454  SEVPKARPLAMREPAFLPFAPPEMPRPWTGKAPLLSXXXXXXXXXXXLXXXXXXXXXXXM 633
            SE P+A PLA+REPAFLPFAPP MPRPWTGKAPLL+           L           +
Sbjct: 141  SEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGQEPAQTV 200

Query: 634  K--GRVMEMKGRSVAGLYG-SGSVRRSREEVLGAPLSRAEVKALVKPHLSHNRQVNLGRD 804
               G +ME++GR    L   S    R+R+EVLG PL+ AEV+ALVKPH+SHNRQ+N+GRD
Sbjct: 201  SPHGIMMEVRGRRQMDLARVSPGDGRTRDEVLGEPLTPAEVRALVKPHISHNRQLNIGRD 260

Query: 805  GLTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDNICYHLEEKTDGKIIHRIGGVVFLFRG 984
            GLTHNMLE+IH HWRR +VCKVRCRGVPTVDM+N+CYHLEEK+ GK+IHR+GGVVFL+RG
Sbjct: 261  GLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDMNNLCYHLEEKSGGKVIHRVGGVVFLYRG 320

Query: 985  RNYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGLTKVEADELRRKGQNLPPICKLAKNGI 1164
            R+YDPRTRPRYP+MLWKPA PVYPKLI+E+PEGLTK EADE+R KG+NLPPICKLAKNGI
Sbjct: 321  RHYDPRTRPRYPLMLWKPATPVYPKLIKEAPEGLTKEEADEMRSKGRNLPPICKLAKNGI 380

Query: 1165 YINLVKDVRDAFEGSQLVKINCEGMHASDYKKLGAKLKELVPCVLLSFDHEQILMWRGKD 1344
            YI LVKDVRDAFEG+ LVKI+CEG++ SDYKK+GAKL++LVPCVLLSFD+EQILM+RGK+
Sbjct: 381  YITLVKDVRDAFEGNDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMYRGKE 440

Query: 1345 WKSRYHMPAPLVSNLHRTDTSDSDLKIPGKTNETTSECISR---------------KEIS 1479
            WKSRY  P  L+  + + + +    K+P K N T S   S                +E+ 
Sbjct: 441  WKSRYSKPLTLIPKVPKNNPTP---KVP-KNNPTMSSDASGSDVNEATDANTQFTVREVL 496

Query: 1480 SPKMLSLWKRAIESQKALLLNDTPD---SPDSLLERVEEFESISQAVEHSYPALIVSASE 1650
             PKM  LW+ A++S  ALLL+D      +PDSLL RVEEF   SQAVEHS+PAL+V+  E
Sbjct: 497  RPKMFKLWESAVDSSLALLLDDAEANDLTPDSLLTRVEEFSVTSQAVEHSFPALLVANCE 556

Query: 1651 GSDHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLDDTEL-------------SAVPF 1791
             +       +E  +++  NDE +T +    E+  +   D                S+VP 
Sbjct: 557  VN-------TESPSAEYINDESETSIAGNQEEQLEQSPDLSSDEHFELDMLERLESSVPL 609

Query: 1792 GSLPVDRITRQL 1827
            GSLP+D +  QL
Sbjct: 610  GSLPIDTMIEQL 621


>ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 572

 Score =  566 bits (1459), Expect = e-158
 Identities = 303/560 (54%), Positives = 376/560 (67%), Gaps = 11/560 (1%)
 Frame = +1

Query: 181  TTSPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXX 360
            + SPP+P+PK         PPP K   +S P P     PA K+ H R++YYKP+  G   
Sbjct: 32   SASPPIPIPK--------YPPPIKTARNSPPPPN----PALKNFHRRTKYYKPVRDG--V 77

Query: 361  XXXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWT 540
                             Y+LPGAPFEFQ+SYSE PKA+PLA+REPAFLPFA PEMPRPWT
Sbjct: 78   ITSDGDRAVVIGENGLSYQLPGAPFEFQYSYSETPKAKPLAIREPAFLPFATPEMPRPWT 137

Query: 541  GKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVL 720
            GKAPL S           L              + +EM G    G        ++REE+L
Sbjct: 138  GKAPLKSAKEKKMKRKVPLFDSFNPPAPGTKGVKRVEMPGPFDLGKRPKPG--KTREEIL 195

Query: 721  GAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDM 900
            G PL + EV+ LV+  +S +RQVNLGRDGLTHNML+LIHSHW+R +VC+V+C+GVPTVDM
Sbjct: 196  GEPLKKWEVQMLVQEQMSDSRQVNLGRDGLTHNMLDLIHSHWKRRRVCRVKCKGVPTVDM 255

Query: 901  DNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPE 1080
            DNIC H+EE+T GKIIHR+GGVV+LFRGRNY+  TRP+YP+MLWKPAAPVYPKLIQE+PE
Sbjct: 256  DNICRHIEERTGGKIIHRVGGVVYLFRGRNYNYNTRPQYPLMLWKPAAPVYPKLIQEAPE 315

Query: 1081 GLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKK 1260
            GLTK EA+ELR+KG+ L PICKLAKNG+YI LV+DVR AFEGS LVKI+C+GMHASDYKK
Sbjct: 316  GLTKAEAEELRKKGKRLLPICKLAKNGVYITLVRDVRHAFEGSSLVKIDCKGMHASDYKK 375

Query: 1261 LGAKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTDTSDSDLKIPGKTN 1440
            LGAKLKELVPCVLLSFD EQILMWRG DW S      P   +   +D      K   K +
Sbjct: 376  LGAKLKELVPCVLLSFDDEQILMWRGPDWVSISGTRLPSAYSDVYSDVDIITSKGRVKDD 435

Query: 1441 ETTSECISRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEHS 1620
            + +S+  ++  ISSPKM+SLW+R+IE++KALLL +    PD+LLE+VEEFE ISQ  EHS
Sbjct: 436  DASSKPDTKTVISSPKMMSLWRRSIETKKALLLEELDLDPDALLEKVEEFEGISQVTEHS 495

Query: 1621 YPALIVSASEGSDHLKPGIS-----------ERKTSDNNNDEYDTDVESYDEDLRDPLDD 1767
            YPALI+S+ +G+ +                 E   SD+N+D+Y  + +S D+ L D    
Sbjct: 496  YPALILSSEDGTSNAIQVYEDAPPNGPYSEYEEAYSDDNDDDYVYEDDSDDDALYDS--- 552

Query: 1768 TELSAVPFGSLPVDRITRQL 1827
                +VP GSLP+D I  +L
Sbjct: 553  ---DSVPLGSLPIDVIAEKL 569


>gb|EMJ28681.1| hypothetical protein PRUPE_ppa003604mg [Prunus persica]
          Length = 562

 Score =  563 bits (1450), Expect = e-157
 Identities = 300/550 (54%), Positives = 368/550 (66%), Gaps = 3/550 (0%)
 Frame = +1

Query: 187  SPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXXXX 366
            SPP+P+PK         PPP K   ++ P PA       K+ H R++YYKP+  G     
Sbjct: 35   SPPIPIPK--------YPPPLKKSQNAPPNPA------LKTVHRRTKYYKPVRDG--VIS 78

Query: 367  XXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWTGK 546
                           Y LPGAPFEFQ+SYSE PK +PLA+REPAFLPFAPP MPRPWTGK
Sbjct: 79   SDGDRAVVIGENGVSYLLPGAPFEFQYSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGK 138

Query: 547  APLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVLGA 726
            APL S           L              + + M      G Y      ++REE+LG 
Sbjct: 139  APLKSAKEKKLKRKVPLLDSFGPMAPGTSGVKEVVMARPVELGKYPKQE--KTREEILGE 196

Query: 727  PLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDN 906
            PL + E+K L++P LS NRQVNLGRDGLTHNML+LIHSHW+R  VCKV+C+GVPTVDMDN
Sbjct: 197  PLKKWEIKMLIQPQLSDNRQVNLGRDGLTHNMLDLIHSHWKRRPVCKVKCKGVPTVDMDN 256

Query: 907  ICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGL 1086
            +C H+EE+T GKIIHR+GGVV+LFRGRNY  + RP+YP+MLWKPAAPVYPKLIQE+PEGL
Sbjct: 257  VCRHIEERTKGKIIHRVGGVVYLFRGRNYSYKDRPQYPLMLWKPAAPVYPKLIQEAPEGL 316

Query: 1087 TKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKKLG 1266
            TK +A+E R+KG+ L PICKLAKNG+YI LV+DVR AFEGS LVKI+C GMHASDYKKLG
Sbjct: 317  TKDQAEEFRKKGKRLLPICKLAKNGVYITLVRDVRHAFEGSPLVKIDCRGMHASDYKKLG 376

Query: 1267 AKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTDTSDSD-LKIPGKTNE 1443
            AKLKELVPCVLLSFD E ILMWRG +W S  H  AP  S     DT+D D L   G+  +
Sbjct: 377  AKLKELVPCVLLSFDDEHILMWRGPNWIS-MHQAAPSPS-----DTADFDILSSTGRGKD 430

Query: 1444 TTSEC--ISRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEH 1617
                C   ++  ++SPKM+SLWKR+I+S KALLL++    PD+LL++VEEFE +SQA EH
Sbjct: 431  YDKPCKPDTKTVMTSPKMMSLWKRSIDSNKALLLDELDLDPDALLKKVEEFEGVSQATEH 490

Query: 1618 SYPALIVSASEGSDHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLDDTELSAVPFGS 1797
            SYPALIVS+ +G+        E   SD  + EYD   ++YD +  D     +  ++P GS
Sbjct: 491  SYPALIVSSEDGTSSSVQVFEEVPQSDPYS-EYDDYSDNYDYESDDDDAFYDSDSIPLGS 549

Query: 1798 LPVDRITRQL 1827
            LPVD I  +L
Sbjct: 550  LPVDVIVEEL 559


>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
            gi|223535358|gb|EEF37033.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 561

 Score =  562 bits (1449), Expect = e-157
 Identities = 313/557 (56%), Positives = 369/557 (66%), Gaps = 9/557 (1%)
 Frame = +1

Query: 190  PPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXXXXX 369
            PP+P+PK   P L +   PQ A S           PAFK  H R++YYKPI   D     
Sbjct: 31   PPIPIPKYPPP-LKKSKNPQTASSS----------PAFKLPHRRTKYYKPIKQ-DGVISS 78

Query: 370  XXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWTGKA 549
                          Y+LPGAPFEFQ SYSE PK +PLA+REPAFLPF PP MPRPWTGKA
Sbjct: 79   DGDRSVVVGENGVSYKLPGAPFEFQFSYSETPKVKPLAIREPAFLPFGPPTMPRPWTGKA 138

Query: 550  PLLSXXXXXXXXXXXLXXXXXXXXXXXMKG-RVMEMKGRSVAGLYGSGSVRRSREEVLGA 726
            PL             +            +G +  EM G    G +      +SR E+LG 
Sbjct: 139  PLKKSKKKK------IPLFSNSIPNDAKEGVKYFEMPGDLQFGKFPEEV--KSRREILGK 190

Query: 727  PLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDN 906
            PL+R E+K LVKP LS NRQVNLGRDGLTHNMLELIHSHWRR  VCKVRC+G+PTVDM+N
Sbjct: 191  PLTRWEIKQLVKPLLSDNRQVNLGRDGLTHNMLELIHSHWRRSPVCKVRCKGIPTVDMNN 250

Query: 907  ICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGL 1086
            IC HLEE+T GKII+RIGGVV+LF GRNYD R+R RYPVMLWKPAAPVYPKLIQ++PEGL
Sbjct: 251  ICRHLEERTGGKIIYRIGGVVYLFCGRNYDYRSRVRYPVMLWKPAAPVYPKLIQDAPEGL 310

Query: 1087 TKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKKLG 1266
            TK EADE R KG+NL PICKLAKNG+YI LV+DVR+AFEGS LVKI+C+GM+ SDYKKLG
Sbjct: 311  TKAEADEFREKGKNLLPICKLAKNGVYITLVRDVRNAFEGSPLVKIDCKGMNPSDYKKLG 370

Query: 1267 AKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTD-TSDSDLKIPGKTNE 1443
            AKLKELVPCVLLSFD E ILMWRG++WK  Y    P VS     D TS SD    GK  +
Sbjct: 371  AKLKELVPCVLLSFDDEHILMWRGQNWKPMY-PEVPSVSTPDAADFTSGSD--DSGKFED 427

Query: 1444 TTSECISRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEHSY 1623
              S   +    SSPKM+SLW+ AIES KA+LL+     PD LL +VEEFE ISQA EHSY
Sbjct: 428  DPSNRDANVVRSSPKMMSLWECAIESSKAILLDQIDLGPDDLLRKVEEFECISQATEHSY 487

Query: 1624 PALIVSASEGSDHLKPGISERKTSDNNNDEYDT-------DVESYDEDLRDPLDDTELSA 1782
            PA+I+S+ +G+++      +   S +  +E DT       D E YD D  + +D    +A
Sbjct: 488  PAVILSSEDGANNTVAAFGDDSLSGSFTEEDDTYTDDEYEDDEYYDSDSFEEVD----TA 543

Query: 1783 VPFGSLPVDRITRQLRQ 1833
            VP GSLPVDR+  +L Q
Sbjct: 544  VPLGSLPVDRLAERLHQ 560


>ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutrema salsugineum]
            gi|557093857|gb|ESQ34439.1| hypothetical protein
            EUTSA_v10007246mg [Eutrema salsugineum]
          Length = 563

 Score =  561 bits (1445), Expect = e-157
 Identities = 298/554 (53%), Positives = 370/554 (66%), Gaps = 5/554 (0%)
 Frame = +1

Query: 187  SPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISHGDXXXX 366
            +PP+P+PK    R  R P   ++ +H+   P  +  PA K  H R+RYYKP+  G     
Sbjct: 33   APPIPIPKYSPSRRNRNP---RSSNHTDTNPKPQSNPALKLPHRRTRYYKPVKEG--VIS 87

Query: 367  XXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPWTGK 546
                           Y+LPGAPFEFQ SYSE PKA+P+ +REPAFLPFAPP MPRPWTGK
Sbjct: 88   SDGERTIVIGDSGVSYQLPGAPFEFQFSYSETPKAKPVGIREPAFLPFAPPTMPRPWTGK 147

Query: 547  APLLSXXXXXXXXXXXLXXXXXXXXXXXMKGRVMEMKGRSVAGLYGSGSVRRSREEVLGA 726
            APL             L              + +EM G    G Y   ++  +R+E+LG 
Sbjct: 148  APLKKSKKKIP-----LFDSFNPPPAGKSGVKYVEMPGPYPFGRYPKEAM--TRDEILGE 200

Query: 727  PLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTVDMDN 906
            PL + E   L+KPH+  NRQVNLGRDG THNMLELIHSHW+R +VCKVRC+GVPTVDMDN
Sbjct: 201  PLKKWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDN 260

Query: 907  ICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQESPEGL 1086
            +C  LEEKT G+IIHR+GGVV+LFRGRNY+ RTRP+YP+MLWKPAAPVYPKLIQE PEGL
Sbjct: 261  VCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEIPEGL 320

Query: 1087 TKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDYKKLG 1266
            TK EA E R KG++L PICKL+KNG+Y++LVKDVRDAFE S LVK++C G+  SDYKK+G
Sbjct: 321  TKDEAHEFRVKGKSLKPICKLSKNGVYVSLVKDVRDAFELSPLVKVDCPGLEPSDYKKIG 380

Query: 1267 AKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTDTSDSDLKIPGKTNET 1446
            AKLKELVPCVLLSFD EQILMWRG+DWKSR+ +  PL   L  T+  D +L    KT E 
Sbjct: 381  AKLKELVPCVLLSFDDEQILMWRGRDWKSRF-LDNPLTPLLSETNIED-ELDPSDKTGEE 438

Query: 1447 TSECISRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEEFESISQAVEHSYP 1626
             +       ISSPKM+SLWKRA+ES KA++L +   SPD+LLE+VEEFE  SQA EH+Y 
Sbjct: 439  QTASDPNTVISSPKMISLWKRALESSKAIVLEELDLSPDNLLEKVEEFEGTSQAAEHTYT 498

Query: 1627 ALIVSASEGS-----DHLKPGISERKTSDNNNDEYDTDVESYDEDLRDPLDDTELSAVPF 1791
            AL++ +++G+     D  +P +      D+ +DE   D ES +             A P 
Sbjct: 499  ALVLPSNDGAEDYVDDEERPPVVYSDIDDDFDDECSDDDESLE------------PAGPV 546

Query: 1792 GSLPVDRITRQLRQ 1833
            GSLPVD+I R+LR+
Sbjct: 547  GSLPVDKIVRKLRE 560


>ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine max]
          Length = 593

 Score =  560 bits (1444), Expect = e-157
 Identities = 314/590 (53%), Positives = 379/590 (64%), Gaps = 39/590 (6%)
 Frame = +1

Query: 181  TTSPPLPVPKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPISH-GDX 357
            T  PP+P+PK         PPP+K P    P P Q P  A K  H RS+Y++P+   G  
Sbjct: 33   TPQPPIPIPK--------YPPPRKKPQ---PPPPQNP--ALKH-HRRSKYHRPVPRDGGI 78

Query: 358  XXXXXXXXXXXXXXXXXXYRLPGAPFEFQHSYSEVPKARPLAMREPAFLPFAPPEMPRPW 537
                              Y LPGAPFEFQ SYSE PKA+P+A+REPAFLPFAPP MPRPW
Sbjct: 79   IASDGADRAVVIGESGVSYLLPGAPFEFQFSYSETPKAKPIAIREPAFLPFAPPTMPRPW 138

Query: 538  TGKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMKG-RVMEMKGRSVAGLYGSGSVRRSREE 714
            TGKAPL                          KG +++EM G    G +      +SREE
Sbjct: 139  TGKAPLKGKKSKKVPLFDSFNPPPAGT-----KGVKLVEMPGPFPMGQFPLEG--KSREE 191

Query: 715  VLGAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQVCKVRCRGVPTV 894
            +LG PL + E+  LVKP +S+NRQVNLGRDGLTHNMLELIHSHW+R +VCK+RC GVPTV
Sbjct: 192  ILGEPLKKWEIHMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCLGVPTV 251

Query: 895  DMDNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPAAPVYPKLIQES 1074
            DMDN+C+H+EEKT GKIIHR+GGVV+LFRGRNY+  TRP+YPVMLWKPAAPVYPKLIQ++
Sbjct: 252  DMDNVCHHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVMLWKPAAPVYPKLIQDA 311

Query: 1075 PEGLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVKINCEGMHASDY 1254
            P GLTK EADELR KG++L PICKLAKNG+Y +LVKDVRDAFEGS LVKINC+G+  SDY
Sbjct: 312  PGGLTKDEADELRMKGKSLLPICKLAKNGVYTSLVKDVRDAFEGSILVKINCKGLDPSDY 371

Query: 1255 KKLGAKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAP--------LVSNLHRT-DTS 1407
            KK+GAKLK+LVPCVLLSFD EQILMWRGKDWKSRY  P P        +V NL  + +T 
Sbjct: 372  KKIGAKLKDLVPCVLLSFDDEQILMWRGKDWKSRYPQPLPVFTPSKANIVGNLENSGETD 431

Query: 1408 DSDLKIPGKTNETTSECISRKEISSPKMLSLWKRAIESQKALLLNDTPDSPDSLLERVEE 1587
            D+  K  G    T           SPKMLSLWKRAI+S KALLL++    PD+LLE+VEE
Sbjct: 432  DNQYKHDGNMVNT-----------SPKMLSLWKRAIQSSKALLLDEFNLGPDALLEKVEE 480

Query: 1588 FESISQAVEHSYPALIVSASEG----------SDHLKPGISERKTSDNNNDEYDTDV--- 1728
            F+++SQA+EHS+PA  +S+ E           + +   G+   +      D Y +D    
Sbjct: 481  FDTVSQALEHSHPAFSLSSKENDAEGSSANFENSYSSDGLHTEEDYAKFEDSYSSDALQT 540

Query: 1729 -----------ESYDEDLRDPLDD----TELSAVPFGSLPVDRITRQLRQ 1833
                       E  DED  D  DD     + SA P GSLPVD I ++L+Q
Sbjct: 541  EEEEEEEEDEDEDEDEDYYDDEDDDLYAVDTSAQP-GSLPVDMIVKKLKQ 589


>ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
            gi|241927535|gb|EES00680.1| hypothetical protein
            SORBIDRAFT_03g013160 [Sorghum bicolor]
          Length = 614

 Score =  560 bits (1444), Expect = e-157
 Identities = 298/573 (52%), Positives = 386/573 (67%), Gaps = 27/573 (4%)
 Frame = +1

Query: 190  PPLPVPKRKSPRLPRIPPPQKA--PSHSTPRPAQRPPPAFKSTHFRSRYYKPI------S 345
            PP+P P+R+ P+  R  P Q+   P+ S PR      PAF+++H R+ Y KP+       
Sbjct: 41   PPVP-PRRRDPKNHRPQPSQEEERPTDSGPRRTAATNPAFRASHLRTAYRKPVPPAAAAG 99

Query: 346  HGDXXXXXXXXXXXXXXXXXXX-----YRLPGAPFEFQHSYSEVPKARPLAMREPAFLPF 510
             G+                        +RLPGAPF+FQ SYSE P+A PLA+REPAF+PF
Sbjct: 100  EGEALLAADPTDAASGRAVVVGPSGLSFRLPGAPFDFQFSYSEGPRAPPLAIREPAFVPF 159

Query: 511  APPEMPRPWTGKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMK--GRVMEMKGRSVAGLYG 684
            APP MPRPWTGKAPLL+           L           +   G +ME++ R    L  
Sbjct: 160  APPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGQEPPQTVSAHGIMMEVRDRRQMDLAR 219

Query: 685  -SGSVRRSREEVLGAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQV 861
             S    RSREEVLG PL+ +EV+ALVKPH+SHNRQ+N+GRDGLTHNMLE+IH HWRR ++
Sbjct: 220  VSPGDGRSREEVLGEPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEI 279

Query: 862  CKVRCRGVPTVDMDNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKPA 1041
            CKVRCRGVPTVDM N+CYHLEEK+ GK+IHR+GGVVF++RGR+YDP+TRP YP+MLWKPA
Sbjct: 280  CKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFVYRGRHYDPKTRPHYPLMLWKPA 339

Query: 1042 APVYPKLIQESPEGLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLVK 1221
             PVYPKLI+E PEGLTK EADE+RRKG++L PICKLAKNGIYI LVKDVRDAFEG+ LVK
Sbjct: 340  TPVYPKLIKEVPEGLTKEEADEMRRKGRDLLPICKLAKNGIYITLVKDVRDAFEGNDLVK 399

Query: 1222 INCEGMHASDYKKLGAKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRTD 1401
            I+CEG++ SDYKK+GAKL++LVPCVLLSFD EQILM+RGK+WKSRY  P  L+  + + +
Sbjct: 400  IDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILMYRGKEWKSRYSKPLTLIPKVPKNN 459

Query: 1402 TS-DSDLKIPGKTNETTSECISRKEISSPKMLSLWKRAIESQKALLLNDTPD---SPDSL 1569
             +  SD+    + ++  ++ ++ +E+  PKM  LWK A++S  ALLL+D      +PDSL
Sbjct: 460  LAMSSDMNSSDEVSDANTQ-VAIREVLRPKMFKLWKSAVDSSLALLLDDAEANDLTPDSL 518

Query: 1570 LERVEEFESISQAVEHSYPALIVSASE------GSDHLKPGISERKTSDNNNDEYDTDVE 1731
            L  VEEF   SQAVEHS+PAL+V+  E       ++++    SE   + N   + +   +
Sbjct: 519  LTLVEEFSVTSQAVEHSFPALLVTNGEVNTESLSAEYINDDESETSIAGNEEGQLEQSPD 578

Query: 1732 -SYDEDLRDPLDDTELSAVPFGSLPVDRITRQL 1827
             S DE     + +   S+VP GSLP+D +  QL
Sbjct: 579  LSGDEHFELDMLERLESSVPLGSLPIDGMIEQL 611


>gb|EAY73777.1| hypothetical protein OsI_01650 [Oryza sativa Indica Group]
          Length = 609

 Score =  560 bits (1443), Expect = e-157
 Identities = 299/588 (50%), Positives = 384/588 (65%), Gaps = 40/588 (6%)
 Frame = +1

Query: 184  TSPPLPVPKRKSPRLPRIPPP-----QKAPSHSTPRPAQRPPP--------AFKSTHFRS 324
            +SPP P+P R  P+  R  PP     ++ PS+   R  Q P P        AF++ H R+
Sbjct: 23   SSPPPPLPNRYDPKHRRPAPPPLPSARRLPSNRRRRHDQPPNPTTGNGGNPAFRAPHLRT 82

Query: 325  RYYKPI------SHGDXXXXXXXXXXXXXXXXXXX-----YRLPGAPFEFQHSYSEVPKA 471
             Y KP+        G+                        +RLPGAPF+F+ SYSE P+A
Sbjct: 83   AYRKPVPPVAAAGEGEALLAADASDAADGRAVVVGPSGLSFRLPGAPFDFRFSYSECPRA 142

Query: 472  RPLAMREPAFLPFAPPEMPRPWTGKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMK--GRV 645
             P+A+REPAFLPFAPP MPRPWTGKAPLL+           L           +   G +
Sbjct: 143  PPVAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGEEAPRTVSAHGIM 202

Query: 646  MEMKGRSVAGLYG-SGSVRRSREEVLGAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNM 822
            ME++GR    L   S    RSREEVLG PL+ AEV+ LVKPH+SHNRQ+N+GRDGLTHNM
Sbjct: 203  MEVRGRRKLDLARVSPGDGRSREEVLGEPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNM 262

Query: 823  LELIHSHWRRDQVCKVRCRGVPTVDMDNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPR 1002
            LE+IH HWRR ++CKVRCRGVPTVDM N+CYHLEEK+ GK+IHR+GGVVFL+RGRNY+PR
Sbjct: 263  LEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNYNPR 322

Query: 1003 TRPRYPVMLWKPAAPVYPKLIQESPEGLTKVEADELRRKGQNLPPICKLAKNGIYINLVK 1182
            TRPRYP+MLWKPA PVYPKLIQE+PEGLTK EADE+RR+G++L PICKLAKNGIYI LV+
Sbjct: 323  TRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEADEMRRRGKDLLPICKLAKNGIYIYLVR 382

Query: 1183 DVRDAFEGSQLVKINCEGMHASDYKKLGAKLKELVPCVLLSFDHEQILMWRGKDWKSRYH 1362
            DVRDAFEGS LVKI+CEG++ SDYKK+GAKL++LVPCVLLSFD+EQILM+RGK+WKSRY 
Sbjct: 383  DVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMFRGKEWKSRYP 442

Query: 1363 MPAPLVSNLHRTDTSDSDLKIPGKTNETTSECISRKEISSPKMLSLWKRAIESQKALLLN 1542
             P  L+  + + +   S  +          + ++ +E+  PKM  LW  AIES  AL+L+
Sbjct: 443  KPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTNAIESSVALMLD 502

Query: 1543 DTPD---SPDSLLERVEEFESISQAVEHSYPALIVSASEGS----------DHLKPGISE 1683
            D      +PDSLL RVE+F   SQAVEHS+PA++V+  E +          D  + G  E
Sbjct: 503  DAEVDALTPDSLLTRVEDFSVTSQAVEHSFPAVLVANDESNPDVLNAEYTEDEPETGTLE 562

Query: 1684 RKTSDNNNDEYDTDVESYDEDLRDPLDDTELSAVPFGSLPVDRITRQL 1827
             +  +        +   +++D+   L+    S+VP G+LP+D + +QL
Sbjct: 563  PQQHEFTESSDVAEDNHFEDDMLKRLE----SSVPLGALPIDAVVKQL 606


>ref|NP_001105669.1| CRS2-associated factor 2, chloroplastic precursor [Zea mays]
            gi|75147311|sp|Q84N48.1|CAF2P_MAIZE RecName:
            Full=CRS2-associated factor 2, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 2; Flags: Precursor
            gi|30349369|gb|AAP22136.1| CRS2-associated factor 2 [Zea
            mays] gi|414877310|tpg|DAA54441.1| TPA: crs2 associated
            factor2 [Zea mays]
          Length = 611

 Score =  560 bits (1443), Expect = e-157
 Identities = 301/579 (51%), Positives = 383/579 (66%), Gaps = 32/579 (5%)
 Frame = +1

Query: 187  SPPLPV--PKRKSPRLPRIPPPQKAPSHSTPRPAQRPPPAFKSTHFRSRYYKPI------ 342
            S PLP   P+R+ P+     P Q+ P+ S P       PAF++ H R+ Y KP+      
Sbjct: 37   SLPLPPVSPRRRDPKKHSQQPSQEEPTDSGPTRTVTTNPAFRAAHLRTAYRKPVPPAAAA 96

Query: 343  SHGDXXXXXXXXXXXXXXXXXXX-----YRLPGAPFEFQHSYSEVPKARPLAMREPAFLP 507
              G+                        +RLPGAPF+FQ SYSE P+A PLA+REPAFLP
Sbjct: 97   GEGEALLAADPTDAASGRAVVVGPSGLSFRLPGAPFDFQFSYSEAPRAPPLAIREPAFLP 156

Query: 508  FAPPEMPRPWTGKAPLLSXXXXXXXXXXXLXXXXXXXXXXXMK--GRVMEMKGRSVAGLY 681
            FAPP MPRPWTGKAPLL+           L           +   G +ME++ R    L 
Sbjct: 157  FAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGQETPQTVSAHGIMMEVRERRKMDLA 216

Query: 682  G-SGSVRRSREEVLGAPLSRAEVKALVKPHLSHNRQVNLGRDGLTHNMLELIHSHWRRDQ 858
              S    RSREEVLG PL+ +EV+ALVKPH+SHNRQ+N+GRDGLTHNMLE+IH HWRR +
Sbjct: 217  RVSPGDGRSREEVLGEPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQE 276

Query: 859  VCKVRCRGVPTVDMDNICYHLEEKTDGKIIHRIGGVVFLFRGRNYDPRTRPRYPVMLWKP 1038
            +CKVRCRGVPTVDM N+CYHLEEK+ GK+IHR+GGVVFL+RGR+YDP+TRPRYP+MLWKP
Sbjct: 277  ICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRHYDPKTRPRYPLMLWKP 336

Query: 1039 AAPVYPKLIQESPEGLTKVEADELRRKGQNLPPICKLAKNGIYINLVKDVRDAFEGSQLV 1218
            A PVYPKLI+E+P+G TK EADE+RRKG++L PICKLAKNGIYI LVKDVRDAFEGS LV
Sbjct: 337  ATPVYPKLIKEAPDGFTKEEADEMRRKGRDLLPICKLAKNGIYITLVKDVRDAFEGSDLV 396

Query: 1219 KINCEGMHASDYKKLGAKLKELVPCVLLSFDHEQILMWRGKDWKSRYHMPAPLVSNLHRT 1398
            KI+CEG++ SDYKK+GAKL++LVPCVLLSFD EQILM RGK+WKSRY  P  L+  + + 
Sbjct: 397  KIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKN 456

Query: 1399 DTSDSDLKIPGKTNETTSECISRKEISSPKMLSLWKRAIESQKALLLNDTPD---SPDSL 1569
            + + + +          +  ++ +E+  PKM  LWK A++S  ALLL+D      +PDSL
Sbjct: 457  NLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKSAVDSSLALLLDDAEANNLTPDSL 516

Query: 1570 LERVEEFESISQAVEHSYPALIVSASEGSDHLKPGISERKTSDNNNDEYDTDVESYDE-- 1743
            L  VEEF   SQAVEHS+PAL+V+  + S       ++  +++  NDE +T V   +E  
Sbjct: 517  LTLVEEFSVTSQAVEHSFPALLVTNGDAS-------TDSLSAEYMNDEPETSVAGNEEGQ 569

Query: 1744 -----DLRDPLD-DTEL-----SAVPFGSLPVDRITRQL 1827
                 DLRD    D ++     S+VP GSLP+D +  +L
Sbjct: 570  LEQSPDLRDDEHFDVDMFERLESSVPLGSLPIDSMIERL 608