BLASTX nr result
ID: Stemona21_contig00014681
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00014681
(2781 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 440 e-120
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 434 e-118
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 396 e-107
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 395 e-107
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 392 e-106
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 391 e-106
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 378 e-102
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 374 e-100
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 373 e-100
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 373 e-100
gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus pe... 365 6e-98
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s... 355 6e-95
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 352 7e-94
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 349 4e-93
ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutr... 345 8e-92
ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III s... 343 2e-91
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 341 9e-91
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr... 340 2e-90
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 337 2e-89
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252... 337 2e-89
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 440 bits (1131), Expect = e-120
Identities = 269/636 (42%), Positives = 366/636 (57%), Gaps = 25/636 (3%)
Frame = +2
Query: 422 KKEEPVGGAPIKK-DEPELASVGSVGFDVSEAPAAEDCSPMEVDD-GEDVVIRDIDVFFT 595
KKEE +KK DEP +S + ++ AE ME DD ED V+R+IDVFFT
Sbjct: 52 KKEEDSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFT 111
Query: 596 PAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVS 775
P P DD+T++YV+QYPLR WRPYEL RC+EVRVKP + +EVDL++D +S+NYD +
Sbjct: 112 PPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAP 171
Query: 776 EHLRLQKQTLSSS-KVPFTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKT 952
R++KQTLS+S K P TT VG+L+GNKLHLNP+H VVQLRPS+ +++ G +++
Sbjct: 172 NAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNN 231
Query: 953 TAQNTEASIK-------SDKGTVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRY 1111
+T +++K G++++ +K +++ N + E WV L+Y +S FS RY
Sbjct: 232 VTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARY 291
Query: 1112 QQKMVAGVDSHIPFLMEPCDYIKSLC-PSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXX 1288
QKMVA +S I FLM P +Y+ SLC P S++ N++ G SRR LLSMP
Sbjct: 292 LQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCE 351
Query: 1289 GPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLY---REPEDLVRDFIL 1459
GP V+RF AL H AP+ S EDVL VL HA+LVQGLWV KSSLL+ + L RD+IL
Sbjct: 352 GPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYIL 411
Query: 1460 CLFSKNHVIPKDKVQ---RFSQYLNKLMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVK 1630
LFSK +I +V ++ L + LAV+R F DWKFKE TD SF+K +PDIV+
Sbjct: 412 LLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVR 471
Query: 1631 EQECAWSTRGKQIMEWF-----QKRMSKGYQKSDTNSRTAASGKLDXXXXXXXXXXXXXX 1795
EQ W + KQI + + ++K K ++T S K D
Sbjct: 472 EQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRT 531
Query: 1796 TAA---RGTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGA 1966
+ R L KA+ E+F HKV S ++ LR A +S+ GA
Sbjct: 532 AMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKST--SPKVDPRTFVAAAYGA 589
Query: 1967 XXXXXXXXXXXXXIAVNVHGVYVLKSGKNPEINPLRQVVIKLFQGKEANAKLKKQDVKHA 2146
A VHGVYV K+ ++ E NPLR+VV+ LF GKE NAKLK+ D+ A
Sbjct: 590 DAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEA 649
Query: 2147 ALILLKREIKDAEFQQVMSDLCDSSRAGWALKRGHG 2254
A I LK+EI E+ +V+S+LC+S + W LK G G
Sbjct: 650 AKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDG 685
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 434 bits (1116), Expect = e-118
Identities = 268/629 (42%), Positives = 359/629 (57%), Gaps = 18/629 (2%)
Frame = +2
Query: 422 KKEEPVGGAPIKK-DEPELASVGSVGFDVSEAPAAEDCSPMEVDD-GEDVVIRDIDVFFT 595
KKEE +KK DEP +S + ++ AE ME DD ED V+R+IDVFFT
Sbjct: 52 KKEEDSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFT 111
Query: 596 PAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVS 775
P P DD+T++YV+QYPLR WRPYEL RC+EVRVKP + +EVDL++D +S+NYD +
Sbjct: 112 PPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAP 171
Query: 776 EHLRLQKQTLSSS-KVPFTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKT 952
R++KQTLS+S K P TT VG+L+GNKLHLNP+H VVQLRPS+ +++ G +++
Sbjct: 172 NAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNN 231
Query: 953 TAQNTEASIKSDKGTVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRYQQKMVAG 1132
+T +++K + E E+V + WV L+Y +S FS RY QKMVA
Sbjct: 232 VTGDTNSAVKLEVSNEE---------ESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAE 282
Query: 1133 VDSHIPFLMEPCDYIKSLC-PSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRF 1309
+S I FLM P +Y+ SLC P S++ N++ G SRR LLSMP GP V+RF
Sbjct: 283 DNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRF 342
Query: 1310 DALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLY---REPEDLVRDFILCLFSKNH 1480
AL H AP+ S EDVL VL HA+LVQGLWV KSSLL+ + L RD+IL LFSK
Sbjct: 343 SALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGP 402
Query: 1481 VIPKDKVQ---RFSQYLNKLMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVKEQECAWS 1651
+I +V ++ L + LAV+R F DWKFKE TD SF+K +PDIV+EQ W
Sbjct: 403 LINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWE 462
Query: 1652 TRGKQIMEWF-----QKRMSKGYQKSDTNSRTAASGKLDXXXXXXXXXXXXXXTAA---R 1807
+ KQI + + ++K K ++T S K D + R
Sbjct: 463 SLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETR 522
Query: 1808 GTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGAXXXXXXX 1987
L KA+ E+F HKV S ++ LR A +S+ GA
Sbjct: 523 EALPKALEEVFRLHKVCSFQLICQALRDLAVSKST--SPKVDPRTFVAAAYGADAPQEEL 580
Query: 1988 XXXXXXIAVNVHGVYVLKSGKNPEINPLRQVVIKLFQGKEANAKLKKQDVKHAALILLKR 2167
A VHGVYV K+ ++ E NPLR+VV+ LF GKE NAKLK+ D+ AA I LK+
Sbjct: 581 HAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKK 640
Query: 2168 EIKDAEFQQVMSDLCDSSRAGWALKRGHG 2254
EI E+ +V+S+LC+S + W LK G G
Sbjct: 641 EITTHEYNKVVSELCESRGSLWVLKSGDG 669
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 396 bits (1018), Expect = e-107
Identities = 252/634 (39%), Positives = 354/634 (55%), Gaps = 24/634 (3%)
Frame = +2
Query: 425 KEEPVGGAPIKKDEPELA-SVGSVGFDVSEAPAAEDCSPMEVD-DGEDVVIRDIDVFFTP 598
+EE + I + + E + S G+V ++ E A ED E + + ED+V+R+IDVFFTP
Sbjct: 73 EEEDIKPPVIAETKTEQSFSNGAVKMEIEEE-AKEDVIMNEGNREEEDMVVREIDVFFTP 131
Query: 599 APLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVSE 778
+ +D +TQLYV+QYPLR WRPYEL+ RCEEVRVKP +E+DL +D +S NYD E +
Sbjct: 132 S-IDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERAS 190
Query: 779 HLRLQKQTLSSSKV-PFTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKTT 955
L++ KQTLSSS + P TT AVG+L+G+KLHLNP+H VVQLRPS+ H+ +++
Sbjct: 191 RLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAA 250
Query: 956 AQNTEASIKSDK--------GTVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRY 1111
A + E ++K ++ + +Q+ + +S E +D E WV L+Y + FS +Y
Sbjct: 251 AADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQ-KADDKECWVPLKYHSSKNDFSAQY 309
Query: 1112 QQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXXG 1291
Q+M+A I F M P DY+ SLCP +S NK GPSRR+LLS+P G
Sbjct: 310 LQRMMAEESCRIQFTMSPYDYVDSLCPG-ASNNNKAQGPSRRLLLSIPLEERLKKLLSEG 368
Query: 1292 PQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLYREP--EDLVRDFILCL 1465
P +RF AL H AP+ S ED+ +VLQ HA LVQGLWV KSSLL+ E + L RD++L L
Sbjct: 369 PPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLL 428
Query: 1466 FSKNHVIPKDKVQRFS----QYLNKLMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVKE 1633
FSKN +I +V S + + + LA++R F DWK KE D F K YPDIVK
Sbjct: 429 FSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKN 488
Query: 1634 QECAWSTRGKQIMEWFQKRMSKGYQKSDTNS-----RTAASGKLDXXXXXXXXXXXXXXT 1798
QE W ++ + G ++ + + S K
Sbjct: 489 QEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSD 548
Query: 1799 AARGTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGAXXXX 1978
R + KA+ ++F+ HKV S ++ LR A +S+L GA
Sbjct: 549 ETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAY--GADAPE 606
Query: 1979 XXXXXXXXXIAVNVH-GVYVLKSG-KNPEINPLRQVVIKLFQGKEANAKLKKQDVKHAAL 2152
+AV +H G++VL+S ++PE +PLR+VVI L + K KLKK DV AAL
Sbjct: 607 HELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---GKLKKADVSAAAL 663
Query: 2153 ILLKREIKDAEFQQVMSDLCDSSRAGWALKRGHG 2254
+ LKREI + E+ +VMSD C+ + W LK G G
Sbjct: 664 LSLKREISNNEYNKVMSDFCEYKSSWWVLKSGDG 697
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 395 bits (1016), Expect = e-107
Identities = 240/595 (40%), Positives = 338/595 (56%), Gaps = 16/595 (2%)
Frame = +2
Query: 518 AAEDCSPMEVD---DGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCE 688
A ++ M+VD D +DVV+R+IDV++TP+ +D +TQLYVMQYPLR WRPYEL+ RC+
Sbjct: 92 AVKENDLMDVDKEEDEDDVVVREIDVYYTPS-VDPNTQLYVMQYPLRPCWRPYELDERCK 150
Query: 689 EVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSS-KVPFTTHNAVGLLIGNK 865
EVRVKP+ + +EVDL++D +++NYD +++ L ++KQTLSSS P T AVG+LIGNK
Sbjct: 151 EVRVKPESTEVEVDLSID-DTKNYDPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNK 209
Query: 866 LHLNPVHTVVQLRPSITHVNVGEMQKRKTTAQNTEASIKSDKGTVEQSSKGKSMVENVNV 1045
LHLNP+H VVQLRPS+ +++ G + +K +++ G ++ SK S
Sbjct: 210 LHLNPIHAVVQLRPSMDYLSSGNSKGKKNATSGEDSNEGKPLGLPKKQSKQMSSGNEQKP 269
Query: 1046 NDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIG 1225
+ +E W+ L+Y S S RY Q MVA S I F M P DY+ SLCP S+ K G
Sbjct: 270 DVEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNG 329
Query: 1226 PSRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVS 1405
PSRR+LLS+P GP ++RF AL HL PN+S ED+L VLQ + LVQGLWV
Sbjct: 330 PSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVP 389
Query: 1406 KSSLLYREPED------LVRDFILCLFSKNHVIPKDK--VQRFSQYLNKLMPPLAVKRSL 1561
K+SLL+ P+ RD+IL LFSK+ V+ + V L + AV+R
Sbjct: 390 KTSLLFPNPKPTEKVKLAARDYILLLFSKSLVVTPSELNVPMKPLILKSFLNIFAVERPS 449
Query: 1562 FDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTAAS 1741
F DWKFKE D F++ YPDIV++QE AW GK I F + + T + +
Sbjct: 450 FKDWKFKENVDTLFVELYPDIVRKQEQAWEVMGKNISAAFDRAGKSVSKNVITKPKKTMT 509
Query: 1742 GKLDXXXXXXXXXXXXXXTAARGTLHKAVLELFEEHKVLSQ--TVVLHQLRAKATQRSSL 1915
+ R L KA+ ++ + HKV ++ LR A +S+L
Sbjct: 510 DE------------------TREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTL 551
Query: 1916 XXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLKSG-KNPEINPL-RQVVIK 2089
+GA +A N+HG YVLKS ++P+ +PL R+VVI
Sbjct: 552 --PKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIG 609
Query: 2090 LFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALKRGHG 2254
LF + NA +KK +V+ AA + LKRE ++E+ +VM+DLC+S + W LK G G
Sbjct: 610 LFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGDG 664
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 392 bits (1006), Expect = e-106
Identities = 239/599 (39%), Positives = 340/599 (56%), Gaps = 19/599 (3%)
Frame = +2
Query: 458 KDEPELASVGSVGFDVSEAPAAE--DCSPMEVDDGEDVVIRDIDVFFTPAPLDDHTQLYV 631
K+E L++ G+V ++ ++ + + E ++ ED+++R+IDVFFTP+ +D TQLYV
Sbjct: 79 KNEAWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVREIDVFFTPS-IDSATQLYV 137
Query: 632 MQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQKQTLSS 811
MQYPLR WRPYEL+ RCEEVRVKP+ + +EVDLT+D +S N+D + +KQTLS+
Sbjct: 138 MQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPAQASKYNFKKQTLST 196
Query: 812 SKVP-FTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKTTAQNTEASIKSD 988
S +P T AVG+LIGNKLHLNP+H VVQLRPS+ HVN + +++ + N E +
Sbjct: 197 SFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKNSATLNPEVKL--- 253
Query: 989 KGTVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPC 1168
E S++GK + + + W+SL+Y S FS RY +KM+A S + F M P
Sbjct: 254 ----EDSNEGKP----IGSSKKQCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPY 305
Query: 1169 DYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAE 1348
DY+ SLCP S+EK K+ GP RR LLS+P GP V RF L H AP++S E
Sbjct: 306 DYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVE 365
Query: 1349 DVLKVLQHHAYLVQGLWVSKSSLLYREPEDL--VRDFILCLFSKNHVIPKDKVQ---RFS 1513
DVLKVLQ + LVQGLW KSSLL+ + +RD++L LFSKN VI +V +
Sbjct: 366 DVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIK 425
Query: 1514 QYLNKLMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRM 1693
+ + + AV+R F DWKFKE TD +FIK YPDIVK+QE AW K++ + F R
Sbjct: 426 EEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVFD-RS 484
Query: 1694 SKGYQKS---------DTNSRTAASGKLDXXXXXXXXXXXXXXTA-ARGTLHKAVLELFE 1843
K K+ +T + + T R L KA+ ++F+
Sbjct: 485 GKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQ 544
Query: 1844 EHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIAVNVH 2023
HKV S ++ LR A +S+L +GA +A N+H
Sbjct: 545 SHKVCSFQLICQGLRDLAVSQSTL--PKADPRIAVAAASGADAPPEELQEIISQVATNIH 602
Query: 2024 GVYVLKSG-KNPEINPLRQVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQV 2197
G YVLKS ++P+ + LR+V+I L + NAKLKK +V AA + KR++ + E+ ++
Sbjct: 603 GFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKRDVTNIEYNKL 661
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 391 bits (1005), Expect = e-106
Identities = 230/597 (38%), Positives = 329/597 (55%), Gaps = 18/597 (3%)
Frame = +2
Query: 509 EAPAAEDCSPMEVDDGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCE 688
E P + + + D ED+++R+IDVFFTP+ +D ++LYVMQYPLR WRPYEL+ RCE
Sbjct: 94 EEPVDLNMDELHLQDDEDMIVREIDVFFTPS-IDADSKLYVMQYPLRPLWRPYELDERCE 152
Query: 689 EVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSSKVP-FTTHNAVGLLIGNK 865
EVRVKP S +E+DL++D +S N+D E + L + KQTLS++ +P T A+G+LIGNK
Sbjct: 153 EVRVKPSTSEVEMDLSIDVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNK 212
Query: 866 LHLNPVHTVVQLRPSITHVNVGEMQKRKTTAQNTEASIKSDK-----GTVEQSSKGKSMV 1030
LHLNP+H VVQLR S+ + G +++ A ++ G+ ++ +K +
Sbjct: 213 LHLNPIHAVVQLRTSMGFLKSGGSKRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSI 272
Query: 1031 ENVNVNDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEK 1210
E + N++E WV L+Y S FS RY Q+M+ +S I F M P DY+ SLCP S
Sbjct: 273 EQRS-NEEECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNN 331
Query: 1211 NKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQ 1390
K+ GPSRR LLSMP G V RF LMH APN++ EDV+ VL + LVQ
Sbjct: 332 TKSKGPSRRFLLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQ 391
Query: 1391 GLWVSKSSLLYR--EPEDLVRDFILCLFSKNHVIPKDKVQ---RFSQYLNKLMPPLAVKR 1555
GLW +S LL+ + + L RD++L FSKN V+ + + ++ + AV+R
Sbjct: 392 GLWAPRSPLLFNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVER 451
Query: 1556 SLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTA 1735
F DWKF++ TD SFIK +P+IV +QE W+ KQI + K G + ++A
Sbjct: 452 PDFKDWKFRQQTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSA 511
Query: 1736 ASGK------LDXXXXXXXXXXXXXXTAARGTLHKAVLELFEEHKVLSQTVVLHQLRAKA 1897
K +R L KA+ +LF+ HKV S ++ LR A
Sbjct: 512 MVNKHLKAINSSNGPSGALTGNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLA 571
Query: 1898 TQRSSL-XXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLKSGKNPEINPLR 2074
+S+L + + +A N+HG YV KS ++P+ PLR
Sbjct: 572 ISQSTLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLR 631
Query: 2075 QVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALKR 2245
+VV L +AKLKK DV AA +LKREI +AE+ +VMSD+C+S + W LK+
Sbjct: 632 KVVTDLLLAGGPDAKLKKADVVEAARHVLKREISNAEYSKVMSDICESKGSAWILKK 688
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 378 bits (971), Expect = e-102
Identities = 252/670 (37%), Positives = 354/670 (52%), Gaps = 60/670 (8%)
Frame = +2
Query: 425 KEEPVGGAPIKKDEPELA-SVGSVGFDVSEAPAAEDCSPMEVD-DGEDVVIRDIDVFFTP 598
+EE + I + + E + S G+V ++ E A ED E + + ED+V+R+IDVFFTP
Sbjct: 73 EEEDIKPPVIAETKTEQSFSNGAVKMEIEEE-AKEDVIMNEGNREEEDMVVREIDVFFTP 131
Query: 599 APLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVSE 778
+ +D +TQLYV+QYPLR WRPYEL+ RCEEVRVKP +E+DL +D +S NYD E +
Sbjct: 132 S-IDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERAS 190
Query: 779 HLRLQKQTLSSSKV-PFTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKTT 955
L++ KQTLSSS + P TT AVG+L+G+KLHLNP+H VVQLRPS+ H+ +++
Sbjct: 191 RLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAA 250
Query: 956 AQNTEASIKSDK--------GTVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRY 1111
A + E ++K ++ + +Q+ + +S E +D E WV L+Y + FS +Y
Sbjct: 251 AADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQ-KADDKECWVPLKYHSSKNDFSAQY 309
Query: 1112 QQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXXG 1291
Q+M+A I F M P DY+ SLCP +S NK GPSRR+LLS+P G
Sbjct: 310 LQRMMAEESCRIQFTMSPYDYVDSLCPG-ASNNNKAQGPSRRLLLSIPLEERLKKLLSEG 368
Query: 1292 PQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLYREP--EDLVRDFILCL 1465
P +RF AL H AP+ S ED+ +VLQ HA LVQGLWV KSSLL+ E + L RD++L L
Sbjct: 369 PPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLL 428
Query: 1466 FSKNHVIPKDKVQRFS----QYLNKLMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVKE 1633
FSKN +I +V S + + + LA++R F DWK KE D F K YPDIVK
Sbjct: 429 FSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKN 488
Query: 1634 QECAWSTRGKQIMEWFQKRMSKGYQKSDTNS-----RTAASGKLDXXXXXXXXXXXXXXT 1798
QE W ++ + G ++ + + S K
Sbjct: 489 QEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSD 548
Query: 1799 AARGTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGAXXXX 1978
R + KA+ ++F+ HKV S ++ LR A +S+L GA
Sbjct: 549 ETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAY--GADAPE 606
Query: 1979 XXXXXXXXXIAVNVH-GVYVLKSG-KNPEINPL--------------------------- 2071
+AV +H G++VL+S ++PE +PL
Sbjct: 607 HELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFLQNPS 666
Query: 2072 ---------RQVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQVMSDLCDSSR 2224
R+VVI L + K KLKK DV AAL+ LKREI + E+ +VMSD C+
Sbjct: 667 FSSELFFPCREVVINLLRVK---GKLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKS 723
Query: 2225 AGWALKRGHG 2254
+ W LK G G
Sbjct: 724 SWWVLKSGDG 733
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 374 bits (961), Expect = e-100
Identities = 235/590 (39%), Positives = 330/590 (55%), Gaps = 23/590 (3%)
Frame = +2
Query: 509 EAPAAEDCSPMEVD-DGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRC 685
E A ED E + + ED+V+R+IDVFFTP+ +D +TQLYV+QYPLR WRPYEL+ RC
Sbjct: 4 EEEAKEDVIMNEGNREEEDMVVREIDVFFTPS-IDANTQLYVLQYPLRPCWRPYELDERC 62
Query: 686 EEVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSSKV-PFTTHNAVGLLIGN 862
EEVRVKP +E+DL +D +S NYD E + L++ KQTLSSS + P TT AVG+L+G+
Sbjct: 63 EEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGD 122
Query: 863 KLHLNPVHTVVQLRPSITHVNVGEMQKRKTTAQNTEASIKSDK--------GTVEQSSKG 1018
KLHLNP+H VVQLRPS+ H+ +++ A + E ++K ++ + +Q+ +
Sbjct: 123 KLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRM 182
Query: 1019 KSMVENVNVNDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPST 1198
+S E +D E WV L+Y + FS +Y Q+M+A I F M P DY+ SLCP
Sbjct: 183 QSSTEQ-KADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPG- 240
Query: 1199 SSEKNKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHA 1378
+S NK GPSRR+LLS+P GP +RF AL H AP+ S ED+ +VLQ HA
Sbjct: 241 ASNNNKAQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHA 300
Query: 1379 YLVQGLWVSKSSLLYREP--EDLVRDFILCLFSKNHVIPKDKVQRFS----QYLNKLMPP 1540
LVQGLWV KSSLL+ E + L RD++L LFSKN +I +V S + + +
Sbjct: 301 LLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKI 360
Query: 1541 LAVKRSLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDT 1720
LA++R F DWK KE D F K YPDIVK QE W ++ + G ++
Sbjct: 361 LAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKP 420
Query: 1721 NS-----RTAASGKLDXXXXXXXXXXXXXXTAARGTLHKAVLELFEEHKVLSQTVVLHQL 1885
+ + S K R + KA+ ++F+ HKV S ++ L
Sbjct: 421 GTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGL 480
Query: 1886 RAKATQRSSLXXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIAVNVH-GVYVLKSG-KNPE 2059
R A +S+L GA +AV +H G++VL+S ++PE
Sbjct: 481 RDLALSQSTLPKADARMVVKAAY--GADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPE 538
Query: 2060 INPLRQVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQVMSDL 2209
+PLR+VVI L + K KLKK DV AAL+ LKREI + E+ + + ++
Sbjct: 539 YDPLREVVINLLRVK---GKLKKADVSAAALLSLKREISNNEYNKALRNM 585
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 373 bits (957), Expect = e-100
Identities = 249/665 (37%), Positives = 339/665 (50%), Gaps = 48/665 (7%)
Frame = +2
Query: 407 PSVPIKKEE---PVGGAPIKKDEPELASV----------GSVGFDVS-----EAPAAEDC 532
P PI K E P KK++ E V G DV E A D
Sbjct: 49 PQPPISKPEVVEPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDD 108
Query: 533 SPMEVDDGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQ 712
P+E D ED+V+R+IDV FTP+ +D +++LYV+QYPLR WRPYE GRC+EVRVKP
Sbjct: 109 DPIEEDASEDMVVREIDVLFTPS-VDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPST 167
Query: 713 SIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSS-KVPFTTHNAVGLLIGNKLHLNPVHT 889
+EVDL +D ES NYD + +++KQTL+SS + P T AVGLL+GNKLHLNPVH
Sbjct: 168 GEVEVDLNVDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHA 227
Query: 890 VVQLRPSITHVNVGEMQKRKTTAQNTEASIKSDK-------GTVEQSSKGKSMVENVNVN 1048
VVQLRPS H+N G KRK + ++ +KS++ G + K V
Sbjct: 228 VVQLRPSFEHLNSGG-PKRKNNVR-ADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTR 285
Query: 1049 DDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGP 1228
D+E W+ L+Y ++S S R+ Q MV+ S + F M P DY+ SLCP TS+ NK GP
Sbjct: 286 DEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGP 345
Query: 1229 SRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSK 1408
S++ LLS+ GP V RF AL H AP+ E+ ++ LQ +A LVQGLWV K
Sbjct: 346 SKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPK 405
Query: 1409 SSLLYREPED----LVRDFILCLFSKNHV-------IPKDKVQRFSQYLNKLMPPLAVKR 1555
S L+ P+D RDF+L LFSKN V +PK R +LN V+R
Sbjct: 406 S--LFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNL----FGVER 459
Query: 1556 SLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTA 1735
F DWKFKE TD F+ + I ++QE W+ K F + + + + +
Sbjct: 460 PAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFT--FLRSIKSVHHANAATGKPG 517
Query: 1736 ASGKLDXXXXXXXXXXXXXXT----------AARGTLHKAVLELFEEHKVLSQTVVLHQL 1885
KL+ R L KA+ +LF+ HKV S ++ L
Sbjct: 518 VVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGL 577
Query: 1886 RAKATQRSSLXXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLKSG-KNPEI 2062
R A +S+L G +A +HG+YVL S ++PE
Sbjct: 578 RDLAVSQSTLPKADARMAVAAAY--GVDAPPDELXKIISQVATEIHGLYVLTSSPEHPEY 635
Query: 2063 NPLRQVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALK 2242
+PLR+VVI+L +G+ A LKK DV A+ L R I E+ +VM+++C S + W LK
Sbjct: 636 DPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLK 695
Query: 2243 RGHGS 2257
G G+
Sbjct: 696 SGDGN 700
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 373 bits (957), Expect = e-100
Identities = 248/665 (37%), Positives = 338/665 (50%), Gaps = 48/665 (7%)
Frame = +2
Query: 407 PSVPIKKEE---PVGGAPIKKDEPELASV----------GSVGFDVS-----EAPAAEDC 532
P PI K E P KK++ E V G DV E A D
Sbjct: 49 PQPPISKPEVVEPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDD 108
Query: 533 SPMEVDDGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQ 712
P+E D ED+V+R+IDV FTP+ +D +++LYV+QYPLR WRPYE GRC+EVRVKP
Sbjct: 109 DPIEEDASEDMVVREIDVLFTPS-VDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPST 167
Query: 713 SIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSS-KVPFTTHNAVGLLIGNKLHLNPVHT 889
+EVDL +D ES NYD + +++KQTL+SS + P T AVGLL+GNKLHLNPVH
Sbjct: 168 GEVEVDLNVDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHA 227
Query: 890 VVQLRPSITHVNVGEMQKRKTTAQNTEASIKSDK-------GTVEQSSKGKSMVENVNVN 1048
VVQLRPS H+N G KRK + ++ +KS++ G + K V
Sbjct: 228 VVQLRPSFEHLNSGG-PKRKNNVR-ADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTR 285
Query: 1049 DDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGP 1228
D+E W+ L+Y ++S S R+ Q MV+ S + F M P DY+ SLCP TS+ NK GP
Sbjct: 286 DEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGP 345
Query: 1229 SRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSK 1408
S++ LLS+ GP V RF AL H AP+ E+ ++ LQ +A LVQGLWV K
Sbjct: 346 SKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPK 405
Query: 1409 SSLLYREPED----LVRDFILCLFSKNHV-------IPKDKVQRFSQYLNKLMPPLAVKR 1555
S L+ P+D RDF+L LFSKN V +PK R +LN V+R
Sbjct: 406 S--LFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNL----FGVER 459
Query: 1556 SLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTA 1735
F DWKFKE TD F+ + I ++QE W+ K F + + + + +
Sbjct: 460 PAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFT--FLRSIKSVHHANAATGKPG 517
Query: 1736 ASGKLDXXXXXXXXXXXXXXT----------AARGTLHKAVLELFEEHKVLSQTVVLHQL 1885
KL+ R L KA+ +LF+ HKV S ++ L
Sbjct: 518 VVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGL 577
Query: 1886 RAKATQRSSLXXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLKSG-KNPEI 2062
R A +S+L G +A +HG+YVL S ++PE
Sbjct: 578 RDLAVSQSTLPKADARMAVAAAY--GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEY 635
Query: 2063 NPLRQVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALK 2242
+PLR+VVI+L +G+ A LKK DV A+ L R I E+ +VM+++C S + W LK
Sbjct: 636 DPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLK 695
Query: 2243 RGHGS 2257
G G+
Sbjct: 696 SGDGN 700
>gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 365 bits (937), Expect = 6e-98
Identities = 232/641 (36%), Positives = 331/641 (51%), Gaps = 30/641 (4%)
Frame = +2
Query: 422 KKEEPVGGAPIKKDEPELASVGSVGFDVSEAPAAEDCSPMEVDDGEDVVIRDIDVFFTPA 601
++EE GAP +D S G + + E P +D PME DD ED ++R+IDVFF P
Sbjct: 69 EEEEGTDGAPKNED-----SNGGLKMETDEEPKEDD--PMEEDDVEDTIVREIDVFFNPH 121
Query: 602 PLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVSEH 781
+DD++QLYV+QYPLR WRPYEL RCEEVR+KP S +E+DL+L+ + +NYD++
Sbjct: 122 -IDDNSQLYVLQYPLRPWWRPYELENRCEEVRLKPATSEMEIDLSLNLDPKNYDEDCGNR 180
Query: 782 LRLQKQTLSSSKVPFTTHN---AVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKT 952
L++ KQTL ++ P T AVG+L+G+KLHLNP+ VVQLRPS+ H+ G +++ +
Sbjct: 181 LKMTKQTLYTTWKPTRTTGTGYAVGVLMGDKLHLNPIDKVVQLRPSLEHLKSGSSRRKNS 240
Query: 953 TAQNTEASIKSDKGTVEQSS-------KGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRY 1111
+ E +K ++ E SS K D+E WV L+Y +S FS +Y
Sbjct: 241 VTGDAEVKVKLEESRQETSSGPSKKQTKRMESSTEKKTEDEESWVPLQYHSSESDFSAKY 300
Query: 1112 QQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXXG 1291
++MV S I F M P DY+ SLCP T G SRR LLS+P
Sbjct: 301 LRRMVGQESSPIQFTMSPYDYVNSLCPRTCK------GSSRRFLLSLPLEERIKKLLVEE 354
Query: 1292 PQVNRF-DALMHLAPNESAEDVLKVLQHHAYLV--QGLWVSKSSLLYREPE--------- 1435
P RF D + AP+ + E++L VLQ HA L+ GLWV K+ LLY +
Sbjct: 355 PLARRFSDLKKYFAPDHTGEELLDVLQKHAQLLLDSGLWVPKTLLLYPSKDMKDRDHVAR 414
Query: 1436 DLVRDFILCLFSKNHVIPKDKV---QRFSQYLNKLMPPLAVKRSLFDDWKFKEATDFSFI 1606
R+++L LF KN VI ++ Q + + + LAV R DWK KE +D SF
Sbjct: 415 QTARNYVLNLFRKNTVISNSQLNLPQNHKNHAYESLKILAVSRPSSQDWKLKEQSDKSFK 474
Query: 1607 KRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTAASGKLDXXXXXXXXXXX 1786
+ YPDI K QE W ++++ F+ +G + + S+ S D
Sbjct: 475 ELYPDIFKSQEQNWERMEEKLVNAFKAHTDRGVKNACMTSKPGKSLNSDKGTTKSASDVQ 534
Query: 1787 XXXTA----ARGTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXX 1954
R L +A+ E+ EHKV + ++ LR A ++SSL
Sbjct: 535 IGGRTMSDETRAALPEAIKEVLHEHKVCNFRLICEGLRRLAVRKSSLPKVDPKTKRVIDA 594
Query: 1955 XNGAXXXXXXXXXXXXXIAVNVHGVYVLKSG-KNPEINPLRQVVIKLFQGKEANAKLKKQ 2131
G +A ++HG+YVLKS ++ E + LR+VVI L K NAKLK+
Sbjct: 595 AYGVDAPQHELQKVICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKGPNAKLKRG 654
Query: 2132 DVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALKRGHG 2254
+V AA I L+R+I E+ +VM+D C + W LK G G
Sbjct: 655 EVFEAAKIALERDINTNEYNKVMNDFCVFKGSAWILKSGDG 695
>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Fragaria vesca subsp. vesca]
Length = 685
Score = 355 bits (911), Expect = 6e-95
Identities = 238/648 (36%), Positives = 336/648 (51%), Gaps = 31/648 (4%)
Frame = +2
Query: 407 PSVPIKKEEPVGGAPIKKDEPELA------SVGSVGFDVSEAPAAEDCSPMEVDDGEDVV 568
P + K E + KK+E + S G+V + E P +D PME DD ED V
Sbjct: 51 PQLVKPKPEALDDVAEKKEEKQEEGAYGDDSNGAVKMETGEEPKDDD-DPMEEDDAEDTV 109
Query: 569 IRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTE 748
+R+IDVFF P +D +TQLYV+QYPLR WRPYEL RCEE+RVKP + +EVDL++D
Sbjct: 110 VREIDVFFNPN-VDSNTQLYVLQYPLRPRWRPYELEDRCEEIRVKPGTAEVEVDLSIDLY 168
Query: 749 SENYDQEVSEHLRLQKQTLSSSKVPF-TTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVN 925
S+N DQE + L++ KQTL++ P +T AVG+L+GNKLHLNPVH VVQLRPS+ H+
Sbjct: 169 SKNCDQEFANRLKMTKQTLATEWDPCRSTGYAVGVLMGNKLHLNPVHAVVQLRPSLDHLK 228
Query: 926 VGEMQKRKTTAQNTEASIKSDKGTVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSG 1105
G +++ T + E ++K ++ ++ S K VE+ + D+E WV L+Y +S FS
Sbjct: 229 PGGSKRKGTATGDAEVAVKREEKSLAPSKKQNKRVES-STEDEESWVPLQYHGSESDFSA 287
Query: 1106 RYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXX 1285
Y ++MV S + F M P DY+ SLCP T G S+R LL++P
Sbjct: 288 GYLKRMVVQDSSPLEFTMTPYDYVNSLCPRTCK------GSSKRALLNLPLEERIQKLLV 341
Query: 1286 XGPQVNRF-DALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLYREPED-------- 1438
P RF D + AP +++L VLQ + L++GLWV K++LLY + E
Sbjct: 342 EEPIARRFSDLKKYYAPRNQEKELLDVLQKNGLLLRGLWVPKTALLYPKKEGSSRKKDDD 401
Query: 1439 ---LVRDFILCLFSKNHVIPKDKVQRF---SQYLNKLMPPLAVKRSLFDDWKFKEATDFS 1600
R+ IL F KN VI ++ + + ++ + LAV R DWK KE +D S
Sbjct: 402 NLRTARNHILNSFQKNPVISYSELNVYPPLKPHFDETLKFLAVYRPSTRDWKLKEQSDVS 461
Query: 1601 FIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTAASGKLDXXXXXXXXX 1780
F + +PDI + QE W KQ++E K ++ S ++ +GKL
Sbjct: 462 FAELHPDISESQEQIWERMDKQLVE-----ALKPHRDLKNASMSSKTGKLPNSDKGPNKS 516
Query: 1781 XXXXXTAARGT--------LHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXX 1936
+ T L +A+ E+F+ KV S ++ L +RS
Sbjct: 517 ASGAPSGGVRTMSDETLAVLPQAIKEVFKTRKVCSFQLICDTLGNMTLERSQHAKVDPNS 576
Query: 1937 XXXXXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLK-SGKNPEINPLRQVVIKLFQGKEAN 2113
NG AV + GVYVLK S ++PE + LR VVIKL QGK
Sbjct: 577 RKLTAVRNGLAAPPEELKNVITQFAVEIGGVYVLKSSSEHPEHDQLRDVVIKLLQGKN-K 635
Query: 2114 AKLKKQDVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALKRGHGS 2257
+KK DV AA L REI + E+ +VM++LC S + W LK G GS
Sbjct: 636 GPIKKLDVTVAAQEELGREISNNEYNKVMNELCVSKGSQWYLKSGDGS 683
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 352 bits (902), Expect = 7e-94
Identities = 233/618 (37%), Positives = 327/618 (52%), Gaps = 27/618 (4%)
Frame = +2
Query: 422 KKEEPVGGAPIKKDEPELASVGSVGFDVSEAPAA----EDCSPMEVDDGEDVVIRDIDVF 589
KKE+ + P +PE G V +V A A E+ MEV+ ED+V+R+IDVF
Sbjct: 65 KKEKEIDAKP----KPEN---GFVKMEVDSAAGAKEEPEENDSMEVEAEEDMVVREIDVF 117
Query: 590 FTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQE 769
F P +D+ TQLYV+QYPLR SWRPYEL+ RCEEVRVKP S +E+DL+LD +S+NYD +
Sbjct: 118 FNPK-IDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176
Query: 770 VSEHLRLQKQTLSSS-KVPFTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKR 946
+ L + KQTL S P T AVG+L+GNKLHLN +H V+QLRPS+ H+ +K+
Sbjct: 177 CGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGSKKK 236
Query: 947 KTTAQNTEASIKSDKGTVEQ---SSKGKSMVENVNVN----DDEPWVSLEYCDIDSHFSG 1105
+ E ++K ++ + ++ SSK + EN +V D+E WV L+Y +S S
Sbjct: 237 NNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESESSV 296
Query: 1106 RYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXX 1285
RY +KM S + F M P DY+ SLCP + N+ GPSRR LLS+P
Sbjct: 297 RYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKSLLC 356
Query: 1286 XG-PQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLYREPED-----LVR 1447
G V+RF L H AP+ + +++L LQ+HA LVQGLW KSSLL ++ + R
Sbjct: 357 EGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQRIAR 416
Query: 1448 DFILCLFSKNHVIPKDKV---QRFSQYLNKLMPPLAVKRSLFDDWKFKEATDFSFIKRYP 1618
D++L LF KN V + +NK + L V+R DWKFK TD SFIK YP
Sbjct: 417 DYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIKNYP 476
Query: 1619 DIVKEQECAWSTRGKQIMEWF-QKRMSKGYQKSDTNSRTAA---SGKLDXXXXXXXXXXX 1786
D+VK+QE W + IM F + +G + + SR S K
Sbjct: 477 DVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNSNKGVPKGTSEVVGGK 536
Query: 1787 XXXTAARGTLHKAVL-ELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNG 1963
R L +L ++ +EHKV S ++ LR A + +L
Sbjct: 537 KIPDDIREVLCSKILPKVIQEHKVCSLQLMCQGLRELALNKLNLPKADDRFARAAACGTA 596
Query: 1964 AXXXXXXXXXXXXXIAVNVHGVYVLK-SGKNPEINPLRQVVIKLFQGKEANAKLKKQDVK 2140
+ A+N+HG+YVLK S ++P+ +P R VVI L + AKLKK ++
Sbjct: 597 S---PGELVKLLDETAINIHGLYVLKSSAEHPQYDPFRNVVIDLLRQNGLAAKLKKAEIF 653
Query: 2141 HAALILLKREIKDAEFQQ 2194
AA LKR++ E+ +
Sbjct: 654 DAAKNALKRDVTSNEYSK 671
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 349 bits (895), Expect = 4e-93
Identities = 221/554 (39%), Positives = 306/554 (55%), Gaps = 24/554 (4%)
Frame = +2
Query: 455 KKDEPELASVG-SVGFDVS-----EAPAAEDCSPMEV-DDGEDVVIRDIDVFFTPAPLDD 613
K ++ ASV SV DV EA +D PME ++GED ++R+IDV+ TP+ +D
Sbjct: 64 KAEDAASASVSQSVAMDVDAKVEEEAEQPKD-EPMESREEGEDEIVREIDVYLTPS-IDP 121
Query: 614 HTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQ 793
+T+LYV+QYPLR WRPYEL+ RCEEVRVK K + +EVDL +D +S+NYD + + +
Sbjct: 122 NTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMT 181
Query: 794 KQTLSSS-KVPFTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKTTAQNTE 970
KQTL+SS K P T AVG+L+GNKLHLNP+H VVQLRPS+ H ++R T + N E
Sbjct: 182 KQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLE 241
Query: 971 ASIKSDK---GTVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDS 1141
+ K ++ G++++ K V N + E W+ L Y S S Y +KMV S
Sbjct: 242 DNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSS 301
Query: 1142 HIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRFDALM 1321
HI F M DY+ +LCP TS+E N + GPS R+LLS+P GP ++RFDAL
Sbjct: 302 HIQFSMNH-DYVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQGPPIHRFDALK 359
Query: 1322 HLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLYREPED---LVRDFILCLFSKNHVIPK 1492
HLAP+ S ED+L VL HA LVQGLW+ KSSLLY + + L RD++L LFS+ +I
Sbjct: 360 HLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINN 419
Query: 1493 DKV---QRFSQYLNKLMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGK 1663
++ Q+ ++ + ++ +A +R +DWKFKE D +FIK P IV+EQE W K
Sbjct: 420 SQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEK 479
Query: 1664 QIMEWF----QKRMSKGYQKSDTNSRTAASGKLDXXXXXXXXXXXXXXTAA---RGTLHK 1822
I E + +K + T + A S L + R L K
Sbjct: 480 LITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPK 539
Query: 1823 AVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGAXXXXXXXXXXXX 2002
A+ +LF+ HKV Q + +LR A SS +G
Sbjct: 540 ALQKLFQSHKVCFQQ-ICQRLREMAVSESS--RPKGFAREAIAAAHGVEAPPEELQAIIS 596
Query: 2003 XIAVNVHGVYVLKS 2044
+A+N+HGVYVLKS
Sbjct: 597 QVAINIHGVYVLKS 610
>ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum]
gi|557091693|gb|ESQ32340.1| hypothetical protein
EUTSA_v10003751mg [Eutrema salsugineum]
Length = 682
Score = 345 bits (884), Expect = 8e-92
Identities = 224/619 (36%), Positives = 324/619 (52%), Gaps = 23/619 (3%)
Frame = +2
Query: 458 KDEPELASVGSVGFDVSEAPAAEDCSPMEVDDGEDVVIRDIDVFFTPAPLDDHTQLYVMQ 637
K + EL S + + + P E+ +V++ ED V+R+IDVFF P+ +D +T+LYV+Q
Sbjct: 81 KVDKELESTEAELMEEDQLPLQEE---EKVEEEEDFVVREIDVFFNPS-IDANTKLYVLQ 136
Query: 638 YPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSS- 814
YPLR SWRPYE++ RCE VRV P S +E+DL++D S NYD + L + KQTL+++
Sbjct: 137 YPLRPSWRPYEMDERCEAVRVNPSTSQVEIDLSMDVHSRNYDSKFGSELHMTKQTLTTTW 196
Query: 815 KVPFTTHNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKTTAQNTEASIKSDKG 994
K P T AVG+L G+KLHLNPVH V QLRPS+ +++ +K A+ T S+ G
Sbjct: 197 KQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMEYLS-----SKKKHAEATGESV----G 247
Query: 995 TVEQSSKGKSMVENVNVNDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDY 1174
T ++ +KG + +E WV+L+Y + S F RY M+A +S I F M P Y
Sbjct: 248 TSKRQNKGVQASTDQKPIPEENWVALKYHGLQSEFCSRYLNGMMANGNSSIDFNMSPDVY 307
Query: 1175 IKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDV 1354
I SLC SS +++ S+R+L S+P GP + R+ L H AP S D
Sbjct: 308 INSLCRGESSRNSESRDSSKRVLTSLPLEERVQKLLCQGPPLFRYSVLKHYAPEFSDNDF 367
Query: 1355 LKVLQHHAYLVQGLWVSKSSLLYRE-PEDLVRDFILCLFSKNHVIPKDKVQ---RFSQYL 1522
LKVLQ +A+LVQGLW K+ LL + P++ RD++L LFSK I +V R + +
Sbjct: 368 LKVLQDYAWLVQGLWTPKTRLLQLDGPQEASRDYVLMLFSKGSTITYSEVAATGRLKEKI 427
Query: 1523 NKLMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKG 1702
++ A +R L DWKFKE D SFIK Y +I +QE W K + E ++++G
Sbjct: 428 TSMLTKFAKERPLLCDWKFKEPADVSFIKSYKEIANKQEIFW----KALDEKLTPKITQG 483
Query: 1703 YQKSDTNSRTAA----SGKLDXXXXXXXXXXXXXXTAA-------------RGTLHKAVL 1831
+ N R SG + A R + KA+
Sbjct: 484 GKSRADNLRNGVGKNPSGTVKPEIPTTLSDKGGSSRNAIHRFVGQKMSEDIRRAILKALK 543
Query: 1832 ELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIA 2011
++F+ HKV S + +LR A S+ A +
Sbjct: 544 KVFQSHKVCSYETICQRLRDLAVSTSNNPKADSGMAQQVALAVDA--HKEELQQIISEVT 601
Query: 2012 VNVHGVYVLK-SGKNPEINPLRQVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEF 2188
V++HG +V K S +PE +PLR VVI L G AKL + DV A +L+R+I E+
Sbjct: 602 VDIHGSFVYKLSPDHPEHDPLRSVVIDLLLGNSPGAKLMRADVFVAGETVLRRKITSNEY 661
Query: 2189 QQVMSDLCDSSRAGWALKR 2245
Q+VM DLC+SS +GW L++
Sbjct: 662 QKVMHDLCESSSSGWVLQK 680
>ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Oryza
brachyantha]
Length = 682
Score = 343 bits (880), Expect = 2e-91
Identities = 240/617 (38%), Positives = 323/617 (52%), Gaps = 26/617 (4%)
Frame = +2
Query: 476 ASVGSVGFDVSEAPAAEDCSPMEVDDGEDVVIRDIDVFFTPAPLDDH-TQLYVMQYPLRS 652
AS + G S + +AE EV+DG+D V+R+IDV+FTP P DD + LY+MQYPLRS
Sbjct: 94 ASASAEGVGASASASAE-----EVEDGDDFVVREIDVYFTPKPFDDEDSMLYLMQYPLRS 148
Query: 653 SWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSSKVPFTT 832
SWRPYELN C+EVRVKP S +EVDL ++TE ENYD E LR +QTLSSSK
Sbjct: 149 SWRPYELNEICKEVRVKPLSSKVEVDLDINTECENYDPEFPVPLRRTEQTLSSSKAADVA 208
Query: 833 HNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVGEMQKRKTT--AQNTEASIKSDKGTVEQ 1006
AVG+L GN +HLN + VVQLRPS+ HVN G R+ N++AS G+
Sbjct: 209 DYAVGVLRGNLVHLNHIDVVVQLRPSMLHVNSGRSNSREALHGGANSDAS-----GSTMP 263
Query: 1007 SSKGKSMVENVN--VNDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIK 1180
S K +E+ + EPW+SL Y S+ + +Y +MV+ I F M DY+
Sbjct: 264 SVKRNERLEDSKDCTEESEPWISLTYQPAGSNIASKYHAEMVSNEGGPIDFTMNTSDYLM 323
Query: 1181 SLCPSTSS-EKNKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVL 1357
SLCP S+ K + R +L +P QVN+FDALMHLA S +D+L
Sbjct: 324 SLCPGGSTGSKGVNRSHAIREMLKLPLEERLKKWFTEVSQVNQFDALMHLAQTYSEDDLL 383
Query: 1358 KVLQHHAYLVQGLWVSKSSLLYREPEDLVRDFILCLFSKNHVIPKDKVQRFSQYLNK--- 1528
KVL +A LV GLWV KSSLL+ + RD IL F+K IP V R + ++
Sbjct: 384 KVLPVYADLVHGLWVCKSSLLFDDGYACKRDRILLEFTKKDSIPLKDVDRLIRVDDERRK 443
Query: 1529 -LMPPLAVKRSLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTR------GKQIMEWFQK 1687
L+PPL +R D+KF D SFIKRYP IVKEQ+ AWS R ++ +
Sbjct: 444 ILLPPLCKRREKLQDYKFILPVDSSFIKRYPHIVKEQDHAWSVREITMRDSQETSSHTEA 503
Query: 1688 RMSKGYQKS-------DTNSRTAASGKLDXXXXXXXXXXXXXXTAARGTLHKAVLE-LFE 1843
R +K KS D N+ A G + L ++VLE +F
Sbjct: 504 RKTKNSAKSNIPSKGPDPNTSKAKDGPVQGVE----------------NLVQSVLETIFT 547
Query: 1844 EHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNG-AXXXXXXXXXXXXXIAVNV 2020
+KV S + LR A + +S A +AV+V
Sbjct: 548 ANKVRSIQAIRRDLRQLAAKYASDRKDGQKLQALSNAATSCAALPLVELQKSVEQVAVHV 607
Query: 2021 HGVYVLKSGKNPEINPLRQVVIKLFQGKEANAKLKKQDVKHAALILLKREIKDAEFQQVM 2200
HGVYV K+ P LR +++KLF K+ NAKL KQ++ +A ++LKR+I + E+ QV+
Sbjct: 608 HGVYVAKT---PTKKSLRHLILKLFHDKDPNAKLTKQEILDSA-VILKRDI-EKEYHQVI 662
Query: 2201 SDLCDSSRAG-WALKRG 2248
S++C + G LK G
Sbjct: 663 SEICIQTEDGHLVLKNG 679
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 341 bits (875), Expect = 9e-91
Identities = 217/584 (37%), Positives = 312/584 (53%), Gaps = 15/584 (2%)
Frame = +2
Query: 548 DDGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEV 727
D D ++R+IDV P+ D TQLYV QYPL++ WRPYEL RC+EVR++P + +EV
Sbjct: 88 DSDHDEIVREIDVCINPS-FDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEV 146
Query: 728 DLTLDTESENYDQEVSEHLRLQKQTLSSSKVPF---TTHNAVGLLIGNKLHLNPVHTVVQ 898
DL +D +S+N+D++ ++KQ LS+S +P T+ AVG+LIG+KLHLNPVH VVQ
Sbjct: 147 DLAIDLDSKNFDRDSVHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQ 206
Query: 899 LRPSITHVNVGEMQKRKTTAQNTEASIKSDKGTVEQSSKGKSMVEN----VNVNDDEPWV 1066
LRPS ++ E++K T N E S++++ E+ G S +N + + E W+
Sbjct: 207 LRPSKRNLKESELKKNIIT-NNDEKSVENE-DVKEKRPVGPSKKQNKSPGIEKDIGEHWL 264
Query: 1067 SLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILL 1246
L+Y S S RY QKM S +PF M P DY+ + CP ++ ++ + R L
Sbjct: 265 HLKYHGARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDR-LKILRTRLS 323
Query: 1247 SMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLY- 1423
+P GP ++RFDALMHLAP+ SA+++++VLQ +A LVQGLWV KSSL+Y
Sbjct: 324 QLPLEERVRIWLLEGPPIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYG 383
Query: 1424 --REPEDLVRDFILCLFSKNHVIPKDKVQRFSQYLNKLMP---PLAVKRSLFDDWKFKEA 1588
E L R+F+L F+K +I K R ++L P LAV+R +DWK KE
Sbjct: 384 TNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEH 443
Query: 1589 TDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTAASGKLDXXXXX 1768
D F Y D+V+EQ+ W GKQI + ++ K+ N +
Sbjct: 444 PDKKFENLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKNPINRNADITALPSGDKPT 503
Query: 1769 XXXXXXXXXT-AARGTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXX 1945
+ R L KA+ E+F +KV S + LR K S
Sbjct: 504 SSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLR-KLGVSKSYPPKGAPRKAI 562
Query: 1946 XXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLKSG-KNPEINPLRQVVIKLFQGKEANAKL 2122
+ +AVN+HGVYVLKS NP+ + LR++VI LF + +AKL
Sbjct: 563 TASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKL 622
Query: 2123 KKQDVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALKRGHG 2254
KK V AA + L R+I + EF +VM +LC S ++ W L+ G G
Sbjct: 623 KKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666
>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|557527706|gb|ESR38956.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 637
Score = 340 bits (873), Expect = 2e-90
Identities = 202/540 (37%), Positives = 291/540 (53%), Gaps = 18/540 (3%)
Frame = +2
Query: 509 EAPAAEDCSPMEVDDGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCE 688
E P + + + D ED+++R+IDVFFTP+ +D ++LYVMQYPLR WRPYEL+ RCE
Sbjct: 94 EEPVDLNMDELHLQDDEDMIVREIDVFFTPS-IDADSKLYVMQYPLRPLWRPYELDERCE 152
Query: 689 EVRVKPKQSIIEVDLTLDTESENYDQEVSEHLRLQKQTLSSSKVP-FTTHNAVGLLIGNK 865
EVRVKP S +E+DL++D +S N+D E + L + KQTLS++ +P T A+G+LIGNK
Sbjct: 153 EVRVKPSTSEVEMDLSIDVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNK 212
Query: 866 LHLNPVHTVVQLRPSITHVNVGEMQKRKTTAQNTEASIKSDK-----GTVEQSSKGKSMV 1030
LHLNP+H VVQLR S+ + G +++ A ++ G+ ++ +K +
Sbjct: 213 LHLNPIHAVVQLRTSMGFLKSGGSKRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSI 272
Query: 1031 ENVNVNDDEPWVSLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEK 1210
E + N++E WV L+Y S FS RY Q+M+ +S I F M P DY+ SLCP S
Sbjct: 273 EQRS-NEEECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNN 331
Query: 1211 NKTIGPSRRILLSMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQ 1390
K+ GPSRR LLSMP G V RF LMH APN++ EDV+ VL + LVQ
Sbjct: 332 TKSKGPSRRFLLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQ 391
Query: 1391 GLWVSKSSLLYR--EPEDLVRDFILCLFSKNHVIPKDKVQ---RFSQYLNKLMPPLAVKR 1555
GLW +S LL+ + + L RD++L FSKN V+ + + ++ + AV+R
Sbjct: 392 GLWAPRSPLLFNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVER 451
Query: 1556 SLFDDWKFKEATDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTA 1735
F DWKF++ TD SFIK +P+IV +QE W+ KQI + K G + ++A
Sbjct: 452 PDFKDWKFRQQTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSA 511
Query: 1736 ASGK------LDXXXXXXXXXXXXXXTAARGTLHKAVLELFEEHKVLSQTVVLHQLRAKA 1897
K +R L KA+ +LF+ HKV S ++ LR A
Sbjct: 512 MVNKHLKAINSSNGPSGALTGNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLA 571
Query: 1898 TQRSSL-XXXXXXXXXXXXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLKSGKNPEINPLR 2074
+S+L + + +A N+HG YV KS ++P+ PLR
Sbjct: 572 ISQSTLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLR 631
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 337 bits (864), Expect = 2e-89
Identities = 218/584 (37%), Positives = 309/584 (52%), Gaps = 15/584 (2%)
Frame = +2
Query: 548 DDGEDVVIRDIDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEV 727
D D V+R+IDV P+ D TQLYV QYPLR+ WRPYEL RC+EVR++P + +EV
Sbjct: 88 DSDHDEVVREIDVCINPS-FDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEV 146
Query: 728 DLTLDTESENYDQEVSEHLRLQKQTLSSSKVPFTT---HNAVGLLIGNKLHLNPVHTVVQ 898
DL +D +S+N+D++ ++KQ LS+S +P T AVG+LIG+KLHLNPVH VVQ
Sbjct: 147 DLAIDLDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQ 206
Query: 899 LRPSITHVNVGEMQKRKTTAQNTEASIKSDKGTVEQSSKGKSMVEN----VNVNDDEPWV 1066
LRPS ++ E++K TT N E S++++ E+ G S +N + + E W+
Sbjct: 207 LRPSKRNLKESELKKNVTT-NNDEKSVENE-DVKEKRPMGPSKKQNKPPGIEKDIGEHWL 264
Query: 1067 SLEYCDIDSHFSGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILL 1246
L+Y S S RY QKM S +PF M P DY+ + P ++ ++ + R L
Sbjct: 265 HLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDR-LKILRTRLS 323
Query: 1247 SMPXXXXXXXXXXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLY- 1423
+P GP ++RFDAL HLAP+ SA+++++VLQ +A LVQGLWV KSSL+Y
Sbjct: 324 QLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYG 383
Query: 1424 --REPEDLVRDFILCLFSKNHVIPKDKVQRFSQYLNKLMP---PLAVKRSLFDDWKFKEA 1588
E L R+F+L F+K +I K R ++L P LAV+R +DWK KE
Sbjct: 384 TNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEH 443
Query: 1589 TDFSFIKRYPDIVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTAASGKLDXXXXX 1768
D F Y D+V+E++ W GKQI + ++ K+ N
Sbjct: 444 PDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPT 503
Query: 1769 XXXXXXXXXT-AARGTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXX 1945
+ R L KA+ E+F +KV S + LR K S
Sbjct: 504 SSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLR-KLGVSKSYPPKGAPRKAI 562
Query: 1946 XXXXNGAXXXXXXXXXXXXXIAVNVHGVYVLKSG-KNPEINPLRQVVIKLFQGKEANAKL 2122
+ +AVN+HGVYVLKS NP+ + LR+VVI LF + +AKL
Sbjct: 563 TASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKL 622
Query: 2123 KKQDVKHAALILLKREIKDAEFQQVMSDLCDSSRAGWALKRGHG 2254
KK V AA + L R+I + EF +VM +LC S ++ W L+ G G
Sbjct: 623 KKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666
>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
lycopersicum]
Length = 659
Score = 337 bits (864), Expect = 2e-89
Identities = 219/628 (34%), Positives = 325/628 (51%), Gaps = 19/628 (3%)
Frame = +2
Query: 413 VPIKKEEPVGGAP-----IKKDEPELASVGSVGFDVSEAPAAEDCSPMEVDDGEDVVIRD 577
+P KKEE V P +K E ++ + + + AE+ ME D +D V+R+
Sbjct: 42 IPTKKEEFVSQPPLRDHIVKNGEAKVEDDVLLNGETTGNDLAEEQVGMETDSDQDEVVRE 101
Query: 578 IDVFFTPAPLDDHTQLYVMQYPLRSSWRPYELNGRCEEVRVKPKQSIIEVDLTLDTESEN 757
+DV+ TP+ + YV+QYPLRS WRPY L+ RC++VR++P + +EVDL +D +S+N
Sbjct: 102 VDVWLTPSA----NEFYVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAIDFDSKN 157
Query: 758 YDQEVSEHLRLQKQTLSSSKVPFTT--HNAVGLLIGNKLHLNPVHTVVQLRPSITHVNVG 931
+D++ ++KQ +S+ VP +T AVG+ IG+K HLNPVH +VQLRPS+ H
Sbjct: 158 FDRDSVHAATIKKQIVSTKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSLQHRKES 217
Query: 932 EMQKRKTTAQNTEASIKSDKGTVEQSSKGKSMVENV---NVND-DEPWVSLEYCDIDSHF 1099
E+ + T N E S +++ E+ G S +N N D E W+ L+Y S
Sbjct: 218 EL--KNLTTSNDEKSCENE-DVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHGTRSDI 274
Query: 1100 SGRYQQKMVAGVDSHIPFLMEPCDYIKSLCPSTSSEKNKTIGPSRRILLSMPXXXXXXXX 1279
S R+ QKM S +PF M P DY+ ++CP+ ++ ++ + R L P
Sbjct: 275 SARHLQKMAMEGGSPVPFSMIPSDYLNAICPARPTDIDR-LRNLRTRLSQKPFEERVRTW 333
Query: 1280 XXXGPQVNRFDALMHLAPNESAEDVLKVLQHHAYLVQGLWVSKSSLLY---REPEDLVRD 1450
GP ++RFD L HLAP+ +++L+VL+ A LVQGLWV+KSSL+Y E L R+
Sbjct: 334 LLEGPPIHRFDTLKHLAPDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVEVLARN 393
Query: 1451 FILCLFSKNHVIPKDKVQRFSQYLNKLMP---PLAVKRSLFDDWKFKEATDFSFIKRYPD 1621
F+L F+K+ +I K R ++L P LAV+R DDWK KE D F Y D
Sbjct: 394 FVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGD 453
Query: 1622 IVKEQECAWSTRGKQIMEWFQKRMSKGYQKSDTNSRTAASG-KLDXXXXXXXXXXXXXXT 1798
+V+EQE W + GKQI + ++ K+ N +
Sbjct: 454 VVREQEAIWESMGKQINDIMHGGRNRPTLKNPLNPKANIPALSSSDKPTPTTFLRTSLSE 513
Query: 1799 AARGTLHKAVLELFEEHKVLSQTVVLHQLRAKATQRSSLXXXXXXXXXXXXXXNGAXXXX 1978
RG L KA+ +F HKV S + + + ++ + +
Sbjct: 514 EIRGALPKALQNVFRIHKVCSLLQICELMEKEDPMKAIISPAGI-----------SDALR 562
Query: 1979 XXXXXXXXXIAVNVHGVYVLKSG-KNPEINPLRQVVIKLFQGKEANAKLKKQDVKHAALI 2155
IAVN+HGVYVLKS NP+ + LR+VVI LF + +NAKLKK + AA +
Sbjct: 563 KEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEGSNAKLKKASIVEAAKL 622
Query: 2156 LLKREIKDAEFQQVMSDLCDSSRAGWAL 2239
L R++ EFQ+VM +LC S + W L
Sbjct: 623 QLGRDVTTVEFQKVMKELCRSENSAWVL 650