BLASTX nr result
ID: Stemona21_contig00014269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00014269
(534 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [A... 62 6e-08
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ... 62 6e-08
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 62 6e-08
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,... 61 2e-07
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 61 2e-07
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 61 2e-07
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr... 61 2e-07
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr... 61 2e-07
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr... 61 2e-07
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei... 59 7e-07
ref|XP_002326192.1| predicted protein [Populus trichocarpa] 59 7e-07
>ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [Amborella trichopoda]
gi|548832038|gb|ERM94834.1| hypothetical protein
AMTR_s00009p00072720 [Amborella trichopoda]
Length = 573
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRN-FYTIKDEKLAQATLDRQHLEG-GEYFEEREKSELEQCL 391
S V+HFP SV+ HE R+D R+ + K++K Q +DR E E + E++Q L
Sbjct: 41 SAVRHFPASVVLHEQRDDLRSPTSSPKEDKAYQEVMDRARTEVYASIGAETKNFEIDQYL 100
Query: 392 KYFERRLLYQPGFWYLCPPFENVENLL-------PISTELTGSISE 508
K FER+LLY P WYL P ++LL P+ T++ I E
Sbjct: 101 KDFERQLLYWPALWYLSPSRILPKSLLSLPFQCKPLETDIESEIKE 146
>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
Length = 572
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYFEEREKSELEQCLK 394
++ + FPTSVL E R++ R F +KDE+ QATL+++ +E +E + Q +
Sbjct: 55 TIARKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEENSDDHNQYMV 114
Query: 395 YFERRLLYQPGFWYLCPPFENVENLLPISTELTGSISEVVPDIES 529
FER+LL QPG WY P + E P S+ + SI+ DIE+
Sbjct: 115 NFERQLLLQPGLWYSLPSSQTGEK-SPFSSSIMKSIT---TDIEN 155
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYFEEREKSELEQCLK 394
++ + FPTSVL E R++ R F +KDE+ QATL+++ +E +E + Q +
Sbjct: 44 TIARKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEENSDDHNQYMV 103
Query: 395 YFERRLLYQPGFWYLCPPFENVENLLPISTELTGSISEVVPDIES 529
FER+LL QPG WY P + E P S+ + SI+ DIE+
Sbjct: 104 NFERQLLLQPGLWYSLPSSQTGEK-SPFSSSIMKSIT---TDIEN 144
>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 561
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYF-EEREKSELEQCL 391
S+ +HFPTSVL E R++ R + K++K +QAT D +++E +F EE+ +L+Q +
Sbjct: 46 SVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLV 105
Query: 392 KYFERRLLYQPGFWYLCPPFENVEN 466
+ E + L+ P W L PP + E+
Sbjct: 106 QDLEHQFLHWPDLWNLSPPMKRGED 130
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYF-EEREKSELEQCL 391
S+ +HFPTSVL E R++ R + K++K +QAT D +++E +F EE+ +L+Q +
Sbjct: 54 SVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLV 113
Query: 392 KYFERRLLYQPGFWYLCPPFENVEN 466
+ E + L+ P W L PP + E+
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGED 138
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYF-EEREKSELEQCL 391
S+ +HFPTSVL E R++ R + K++K +QAT D +++E +F EE+ +L+Q +
Sbjct: 55 SVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLV 114
Query: 392 KYFERRLLYQPGFWYLCPPFENVEN 466
+ E + L+ P W L PP + E+
Sbjct: 115 QDLEHQFLHWPDLWNLSPPMKRGED 139
>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530789|gb|ESR41972.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 561
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYF-EEREKSELEQCL 391
S+ +HFPTSVL E R++ R + K++K +QAT D +++E +F EE+ +L+Q +
Sbjct: 46 SVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLV 105
Query: 392 KYFERRLLYQPGFWYLCPPFENVEN 466
+ E + L+ P W L PP + E+
Sbjct: 106 QDLEHQFLHWPDLWNLSPPMKRGED 130
>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530788|gb|ESR41971.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 569
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYF-EEREKSELEQCL 391
S+ +HFPTSVL E R++ R + K++K +QAT D +++E +F EE+ +L+Q +
Sbjct: 54 SVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLV 113
Query: 392 KYFERRLLYQPGFWYLCPPFENVEN 466
+ E + L+ P W L PP + E+
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGED 138
>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530787|gb|ESR41970.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 558
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNF-YTIKDEKLAQATLDRQHLEGGEYF-EEREKSELEQCL 391
S+ +HFPTSVL E R++ R + K++K +QAT D +++E +F EE+ +L+Q +
Sbjct: 43 SVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLV 102
Query: 392 KYFERRLLYQPGFWYLCPPFENVEN 466
+ E + L+ P W L PP + E+
Sbjct: 103 QDLEHQFLHWPDLWNLSPPMKRGED 127
>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
FACTOR family protein [Populus trichocarpa]
Length = 535
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNFYTI-KDEKLAQATLDRQHLE-GGEYFEEREKSELEQCL 391
S QHFPTSVL E R++ R I K+++ +QATLDR+ E G E ++ EL+Q +
Sbjct: 46 STAQHFPTSVLLQEQRDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLV 105
Query: 392 KYFERRLLYQPGFWYLCPPFENVE 463
+ FE +L + P +W L +VE
Sbjct: 106 ENFEYQLHHWPAYWNLTDKLIDVE 129
>ref|XP_002326192.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 218 SMVQHFPTSVLSHEHRNDSRNFYTI-KDEKLAQATLDRQHLE-GGEYFEEREKSELEQCL 391
S QHFPTSVL E R++ R I K+++ +QATLDR+ E G E ++ EL+Q +
Sbjct: 46 STAQHFPTSVLLQEQRDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLV 105
Query: 392 KYFERRLLYQPGFWYLCPPFENVE 463
+ FE +L + P +W L +VE
Sbjct: 106 ENFEYQLHHWPAYWNLTDKLIDVE 129