BLASTX nr result
ID: Stemona21_contig00013874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00013874
(287 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGE93838.1| chloroplat ribulose bisphosphate carboxylase smal... 60 4e-09
sp|O24045.1|RBS_MUSAC RecName: Full=Ribulose bisphosphate carbox... 61 7e-09
gb|ABQ42552.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 7e-09
gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 7e-09
gb|ABA46887.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 7e-09
gb|ABA46883.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 7e-09
gb|ABA46878.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 7e-09
gb|ABA46879.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 7e-09
gb|ABA46911.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 1e-08
gb|ABA46901.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 2e-08
gb|ABA46900.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 2e-08
gb|ABA46889.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 2e-08
gb|ABA46898.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 2e-08
gb|ABA46877.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 2e-08
gb|ABA46875.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 2e-08
gb|ABA46892.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 59 4e-08
gb|ABA46882.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 59 4e-08
gb|ABA46888.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 59 4e-08
gb|ABA46910.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 59 4e-08
gb|ABA46891.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 59 4e-08
>gb|AGE93838.1| chloroplat ribulose bisphosphate carboxylase small chain SSU5B,
partial [Posidonia oceanica]
Length = 84
Score = 60.5 bits (145), Expect(2) = 4e-09
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQ+SMVAP TGLKS+AAFPV+RKP+ DLS LPSN
Sbjct: 18 PAQASMVAPFTGLKSSAAFPVSRKPNADLSSLPSN 52
Score = 25.8 bits (55), Expect(2) = 4e-09
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCMQV
Sbjct: 52 NGGRVQCMQV 61
>sp|O24045.1|RBS_MUSAC RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|2258433|gb|AAB63287.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Musa acuminata]
Length = 180
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKS +AFPVTRKP+ DLS LPSN
Sbjct: 18 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSN 52
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 52 NGGRVQCMKV 61
>gb|ABQ42552.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
gi|238801314|gb|ACR56377.1| chloroplast
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKS +AFPVTRKP+ DLS LPSN
Sbjct: 18 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSN 52
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 52 NGGRVQCMKV 61
>gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKS +AFPVTRKP+ DLS LPSN
Sbjct: 18 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSN 52
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 52 NGGRVQCMKV 61
>gb|ABA46887.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa AAAB Group]
Length = 161
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKS +AFPVTRKP+ DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46883.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa AAAB Group]
Length = 161
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKS +AFPVTRKP+ DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46878.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa balbisiana]
Length = 161
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKS +AFPVTRKP+ DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46879.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa balbisiana]
Length = 161
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKS +AFPVTRKP+ DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46911.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata]
Length = 161
Score = 60.1 bits (144), Expect(2) = 1e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPSN 50
Score = 24.6 bits (52), Expect(2) = 1e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMEV 59
>gb|ABA46901.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 181
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LPSN
Sbjct: 19 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPSN 53
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 53 NGGRVQCMKV 62
>gb|ABA46900.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LPSN
Sbjct: 18 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPSN 52
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 52 NGGRVQCMKV 61
>gb|ABA46889.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa AAAB Group]
Length = 161
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46898.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 161
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46877.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa balbisiana]
Length = 161
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFP+TRK + DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPITRKANADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46875.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa balbisiana] gi|76574189|gb|ABA46876.1|
chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Musa balbisiana]
Length = 161
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFP+TRK + DLS LPSN
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPITRKANADLSHLPSN 50
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46892.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 161
Score = 58.5 bits (140), Expect(2) = 4e-08
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LP N
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPGN 50
Score = 24.3 bits (51), Expect(2) = 4e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46882.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa AAAB Group]
Length = 161
Score = 58.5 bits (140), Expect(2) = 4e-08
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LP N
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPGN 50
Score = 24.3 bits (51), Expect(2) = 4e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46888.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa AAAB Group] gi|76574224|gb|ABA46893.1|
chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Musa acuminata AAA
Group]
Length = 161
Score = 58.5 bits (140), Expect(2) = 4e-08
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LP N
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPGN 50
Score = 24.3 bits (51), Expect(2) = 4e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46910.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata]
Length = 161
Score = 58.5 bits (140), Expect(2) = 4e-08
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LP N
Sbjct: 16 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPGN 50
Score = 24.3 bits (51), Expect(2) = 4e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 50 NGGRVQCMKV 59
>gb|ABA46891.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 157
Score = 58.5 bits (140), Expect(2) = 4e-08
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 152 PAQSSMVAPLTGLKSTAAFPVTRKPSTDLSKLPSN 256
PAQSSMVAP TGLKST+AFPVTRK + DLS LP N
Sbjct: 12 PAQSSMVAPFTGLKSTSAFPVTRKANADLSHLPGN 46
Score = 24.3 bits (51), Expect(2) = 4e-08
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 258 NGGRVQCMQV 287
NGGRVQCM+V
Sbjct: 46 NGGRVQCMKV 55