BLASTX nr result

ID: Stemona21_contig00013080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00013080
         (1004 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding...    74   9e-11
ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Popu...    72   3e-10
ref|XP_006644779.1| PREDICTED: double-stranded RNA-binding prote...    71   6e-10
ref|XP_003567159.1| PREDICTED: double-stranded RNA-binding prote...    67   8e-09
ref|XP_004970124.1| PREDICTED: double-stranded RNA-binding prote...    64   1e-07
ref|XP_004970123.1| PREDICTED: double-stranded RNA-binding prote...    64   1e-07
ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citr...    63   2e-07
gb|EMT32594.1| hypothetical protein F775_08192 [Aegilops tauschii]     62   4e-07
ref|XP_002515850.1| conserved hypothetical protein [Ricinus comm...    60   1e-06
gb|EOY33183.1| Ribonuclease 3, putative [Theobroma cacao]              60   1e-06
ref|XP_004296266.1| PREDICTED: uncharacterized protein LOC101296...    58   7e-06

>sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding protein 1; AltName:
           Full=dsRNA-binding protein 1 gi|56785214|dbj|BAD82066.1|
           putative dsRNA-binding protein ODB1 [Oryza sativa
           Japonica Group]
          Length = 441

 Score = 73.9 bits (180), Expect = 9e-11
 Identities = 36/61 (59%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = +2

Query: 584 CGLVDSSNVSSMENMTC--SLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSH 757
           CG V  ++ S++ +  C  SLL NRV+VYP +PDLVLP+GAT+LPFSDD+WVAVSL   +
Sbjct: 381 CGSVPLASASTVSSTGCGCSLLTNRVQVYPRRPDLVLPEGATVLPFSDDVWVAVSLPTLN 440

Query: 758 H 760
           H
Sbjct: 441 H 441


>ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Populus trichocarpa]
           gi|550331796|gb|EEE87589.2| hypothetical protein
           POPTR_0009s15500g [Populus trichocarpa]
          Length = 484

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 31/58 (53%), Positives = 38/58 (65%)
 Frame = +2

Query: 593 VDSSNVSSMENMTCSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHHEG 766
           +  SNV         LLCNRVRVYPC PD+ LP G T++P SD+ WVAVSL+F   +G
Sbjct: 426 ISDSNVRKATRQRSYLLCNRVRVYPCYPDIALPNGITVMPISDNQWVAVSLEFPMEQG 483


>ref|XP_006644779.1| PREDICTED: double-stranded RNA-binding protein 1-like [Oryza
           brachyantha]
          Length = 413

 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = +2

Query: 632 CSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHH 760
           CSLL NRV+VYP +PDLVLP+GAT+LPFSDD+WVAVSL   +H
Sbjct: 371 CSLLTNRVQVYPRRPDLVLPEGATVLPFSDDVWVAVSLPTLNH 413


>ref|XP_003567159.1| PREDICTED: double-stranded RNA-binding protein 1-like [Brachypodium
           distachyon]
          Length = 608

 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +2

Query: 632 CSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDF 751
           CS+L NR++VYP +PD+VLP+GAT+LPFSD+ WVAVSL F
Sbjct: 566 CSMLTNRIQVYPRRPDMVLPEGATVLPFSDEAWVAVSLPF 605


>ref|XP_004970124.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
           [Setaria italica]
          Length = 521

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 27/52 (51%), Positives = 38/52 (73%)
 Frame = +2

Query: 614 SMENMTCSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHHEGD 769
           S +   C +L NR++VYP   D+ +P+GAT+LPFSDDMWVAVSL + ++  D
Sbjct: 465 SSDGCGCYMLTNRIQVYPRNTDMAIPEGATMLPFSDDMWVAVSLPYRNNNED 516


>ref|XP_004970123.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
           [Setaria italica]
          Length = 561

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 27/52 (51%), Positives = 38/52 (73%)
 Frame = +2

Query: 614 SMENMTCSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHHEGD 769
           S +   C +L NR++VYP   D+ +P+GAT+LPFSDDMWVAVSL + ++  D
Sbjct: 505 SSDGCGCYMLTNRIQVYPRNTDMAIPEGATMLPFSDDMWVAVSLPYRNNNED 556


>ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citrus clementina]
           gi|557549031|gb|ESR59660.1| hypothetical protein
           CICLE_v10018273mg [Citrus clementina]
          Length = 364

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +2

Query: 593 VDSSNVSSMENMTCS-LLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHHEGD 769
           +  S  +    +T S LLCNRVRVY   PD+  PKG T++P S+D WVAVSL+F + EG+
Sbjct: 305 ISDSMAAKRATVTSSYLLCNRVRVYTRIPDIAFPKGITLMPISEDKWVAVSLEFPNEEGN 364


>gb|EMT32594.1| hypothetical protein F775_08192 [Aegilops tauschii]
          Length = 686

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = +2

Query: 590 LVDSSNVSSMENMTC--SLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAV 739
           LV  +    +++  C  S+  NRV++YPC+PDL LP+GAT+LPFSDD WVAV
Sbjct: 630 LVAKATAVPVDSARCGYSMSTNRVQIYPCRPDLKLPEGATVLPFSDDKWVAV 681


>ref|XP_002515850.1| conserved hypothetical protein [Ricinus communis]
           gi|223545005|gb|EEF46519.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 26/59 (44%), Positives = 40/59 (67%)
 Frame = +2

Query: 590 LVDSSNVSSMENMTCSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHHEG 766
           L  ++N+   E     LLC RVR+YP  P++  PKG T+LP +D++WVAV+L+F + +G
Sbjct: 225 LSSNTNMGKPEAPESYLLCERVRMYPSYPNIDFPKGITVLPITDNIWVAVNLEFPNEQG 283


>gb|EOY33183.1| Ribonuclease 3, putative [Theobroma cacao]
          Length = 368

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 27/57 (47%), Positives = 36/57 (63%)
 Frame = +2

Query: 593 VDSSNVSSMENMTCSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHHE 763
           +  SN+      +  LL NR RVY C PD+  PKG T+LP S+D WVAVSL+F + +
Sbjct: 310 ISDSNMKKGPGSSSYLLNNRFRVYRCFPDIAFPKGITVLPISEDSWVAVSLEFPNEK 366


>ref|XP_004296266.1| PREDICTED: uncharacterized protein LOC101296761 [Fragaria vesca
           subsp. vesca]
          Length = 384

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +2

Query: 605 NVSSMENMTCSLLCNRVRVYPCKPDLVLPKGATILPFSDDMWVAVSLDFSHHEGD 769
           N   +  +   LLCNR RVY   PD+  PK  T+LP SDD WVAV L+F + E D
Sbjct: 330 NEGKIAGLKSYLLCNRFRVYTQFPDIAFPKCITMLPISDDKWVAVRLEFPNEESD 384


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