BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00012041
         (2737 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   841   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   839   0.0  
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]       832   0.0  
gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus pe...   822   0.0  
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...   809   0.0  
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...   809   0.0  
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   807   0.0  
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   806   0.0  
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm...   805   0.0  
ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [A...   803   0.0  
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...   803   0.0  
gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]       801   0.0  
tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]                   800   0.0  
ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|...   798   0.0  
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   798   0.0  
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   796   0.0  
ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [S...   796   0.0  
dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]    795   0.0  
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...   789   0.0  
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   789   0.0  

>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  841 bits (2173), Expect = 0.0
 Identities = 458/740 (61%), Positives = 533/740 (72%), Gaps = 24/740 (3%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQALSSDDDDVGTSRSAGSSTMQKIVDKLKKFGY 2421
            NW+  W+ P    ++ PK    V+NYR + +    D G   S G STM+KIV+KLKKFGY
Sbjct: 82   NWIDKWNGPHQ--KSHPKESRPVMNYRNSETVSRSDGG---SGGGSTMEKIVEKLKKFGY 136

Query: 2420 IXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE-------------EVR 2280
            +              +   +GS+EDIF+ E+G LPN +GG S +             EVR
Sbjct: 137  MDDVKETKENVQERIIE--KGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVR 194

Query: 2279 FPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTRE 2100
            FPWE+PK   G   +     +S+TSLAELTLPE ELRRLR+L +R+K+KTKI G GVT+ 
Sbjct: 195  FPWERPKVEEGSVRI-----KSRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQA 249

Query: 2099 IVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYEV 1920
            +VD+I EKWKT E+V+LKC+G  ALNM+R+HEILERKTGGLVIWRSGTS+SLYRGV+YEV
Sbjct: 250  VVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEV 309

Query: 1919 P-QLVKKQYLSSGV----------NSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEK 1773
            P QL K+ Y  +            NS + + N   G+      + NV  H       +  
Sbjct: 310  PVQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQNV--HASQATLNITD 367

Query: 1772 EQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYG 1593
             +N  +  E+KYEDE++KLLDGLGPRYTDW G DPLP+DADLLP  + GY PPFRILPYG
Sbjct: 368  GENKDTESEVKYEDEIDKLLDGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYG 427

Query: 1592 VRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLT 1413
            VRS+LGLKE+T        LPPHFALGRSRQ EGLA AM+KLWE SSIAK+ LKR VQLT
Sbjct: 428  VRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLT 487

Query: 1412 TSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXX 1233
            TSERMAEDI+KLTGG LLSRNKD+LVFYRGK+FLS                LQDEEEQ  
Sbjct: 488  TSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQAR 547

Query: 1232 XXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRK 1053
                          E+VG AGTLGETLEADARWG +L      KM+K AEVARHA+L+RK
Sbjct: 548  LRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRK 607

Query: 1052 LERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLG 873
            LER+L LAERKLMKAENAL+KVEEF KPA    DPESITDEERFMFRKLGLRMKAFLLLG
Sbjct: 608  LERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLG 667

Query: 872  RRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFA 693
            RRGVF GTVENMHLHWKYRELVKIIVKAKTF QV+  AL+LE+ESGGVLVSVDKVSKGFA
Sbjct: 668  RRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFA 727

Query: 692  IIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQM 513
            I+VFRGKDY+RPS+LRPKNLLTKRKALARSIELQR EAL  HIS L + V +LRSE++QM
Sbjct: 728  IVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQM 787

Query: 512  EDVKDRGDENLYAKLDSAYS 453
            + VKD GDE LY KLDSAY+
Sbjct: 788  DIVKDHGDEELYDKLDSAYA 807


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  839 bits (2167), Expect = 0.0
 Identities = 457/740 (61%), Positives = 532/740 (71%), Gaps = 24/740 (3%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQALSSDDDDVGTSRSAGSSTMQKIVDKLKKFGY 2421
            NW+  W+ P    ++ PK    V+NYR + +    D G   S G STM+KIV+KLKKFGY
Sbjct: 82   NWIDKWNGPHQ--KSHPKEXRPVMNYRNSETVSRSDGG---SGGGSTMEKIVEKLKKFGY 136

Query: 2420 IXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE-------------EVR 2280
            +              +   +GS+EDIF+ E+G LPN +GG S +             EVR
Sbjct: 137  MDDVKETKENVQERIIE--KGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVR 194

Query: 2279 FPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTRE 2100
            FPWE+PK   G   +     +S+TSLAELTLPE ELRRLR+L +R+K+KTKI G GVT+ 
Sbjct: 195  FPWERPKVEEGSVRI-----KSRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQA 249

Query: 2099 IVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYEV 1920
            +VD+I EKWKT E+V+LKC+G  ALNM+R+HEILERKTGGLVIWRSGTS+SLYRGV+YEV
Sbjct: 250  VVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEV 309

Query: 1919 P-QLVKKQYLSSGV----------NSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEK 1773
            P QL K+ Y  +            NS + + N   G+      + NV  H       +  
Sbjct: 310  PVQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQNV--HASQATLXITD 367

Query: 1772 EQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYG 1593
             +N  +  E+KYEDE++KLLDGLGPRYTDW   DPLP+DADLLP  + GY PPFRILPYG
Sbjct: 368  GENKDTESEVKYEDEIDKLLDGLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPYG 427

Query: 1592 VRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLT 1413
            VRS+LGLKE+T        LPPHFALGRSRQ EGLA AM+KLWE SSIAK+ LKR VQLT
Sbjct: 428  VRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLT 487

Query: 1412 TSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXX 1233
            TSERMAEDI+KLTGG LLSRNKD+LVFYRGK+FLS                LQDEEEQ  
Sbjct: 488  TSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQAR 547

Query: 1232 XXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRK 1053
                          E+VG AGTLGETLEADARWG +L      KM+K AEVARHA+L+RK
Sbjct: 548  LRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRK 607

Query: 1052 LERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLG 873
            LER+L LAERKLMKAENAL+KVEEF KPA    DPESITDEERFMFRKLGLRMKAFLLLG
Sbjct: 608  LERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLG 667

Query: 872  RRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFA 693
            RRGVF GTVENMHLHWKYRELVKIIVKAKTF QV+  AL+LE+ESGGVLVSVDKVSKGFA
Sbjct: 668  RRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFA 727

Query: 692  IIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQM 513
            I+VFRGKDY+RPS+LRPKNLLTKRKALARSIELQR EAL  HIS L + V +LRSE++QM
Sbjct: 728  IVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQM 787

Query: 512  EDVKDRGDENLYAKLDSAYS 453
            + VKD GDE LY KLDSAY+
Sbjct: 788  DIVKDHGDEELYDKLDSAYA 807


>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
          Length = 876

 Score =  832 bits (2150), Expect = 0.0
 Identities = 450/742 (60%), Positives = 542/742 (73%), Gaps = 27/742 (3%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQ-----ALS-SDDDDVGTSRSAGSSTMQKIVDK 2439
            NWL SW++        PK P  V NYR+     +LS S  D+ G S    SSTM+KIV+K
Sbjct: 86   NWLDSWNKTHKGFG--PKPPKTVFNYRKKGDVWSLSYSQSDNNGRS---SSSTMEKIVEK 140

Query: 2438 LKKFGYIXXXXXXXXXXXXXPLRPA-RGSVEDIFFAEDGDLPNSRGGISPE--------- 2289
            LKKFGYI             P R   RGS+EDIF+ E+G LPN+RGG S E         
Sbjct: 141  LKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVF 200

Query: 2288 ----EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKIS 2121
                EVRFPWE+ K    +GG + R+  SKTSLAELTLPE ELRRLR+L  R+KSK +I 
Sbjct: 201  GSDGEVRFPWEKRKEDEEEGGWTARR-DSKTSLAELTLPESELRRLRNLTFRTKSKVRIK 259

Query: 2120 GAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLY 1941
            GAGVT+E+VD IHEKWKTEE+VRLK +G PALNMKRMHEILERKTGGLVIWRSGTS+SLY
Sbjct: 260  GAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLY 319

Query: 1940 RGVTYEVPQLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAP------- 1782
            RGV+YEVP +    +LS  +   ++     +     + KD++     +D V+P       
Sbjct: 320  RGVSYEVPSV----HLSKRIYKRNETFTYALPSVSDKTKDLSSLGSHKDVVSPQANSETA 375

Query: 1781 VEKEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRIL 1602
             E  ++  S  EI+YEDEV+KLL+GLGPRYTDW G +PLPVDADLLP +V GY PPFR+L
Sbjct: 376  AEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVL 435

Query: 1601 PYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDV 1422
            PYGVRS+LGLKE+T        LPPHFA+GRSRQ +GLA AM+KLWE SSIAKI LKR V
Sbjct: 436  PYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGV 495

Query: 1421 QLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEE 1242
            QLTTSERMAEDI+KLTGG LLSRNKD+LVFYRGK+FLS                LQDEEE
Sbjct: 496  QLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSADVAEALVERERLAKSLQDEEE 555

Query: 1241 QXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADL 1062
            Q                E+ G AGTLGETL+ADARWG +L   H +K++K AE+ RHA+L
Sbjct: 556  QARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANL 615

Query: 1061 MRKLERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFL 882
            +RKL++ L  A+RKL+KAE AL KVE++ KPA+   DPESITDEERFMFRKLGLRMKAFL
Sbjct: 616  VRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPESITDEERFMFRKLGLRMKAFL 675

Query: 881  LLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSK 702
            LLGRRGVFDGT+ENMHLHWKYRELVKII+KAKTF QV+ VAL+LEAESGGVLVSVD++SK
Sbjct: 676  LLGRRGVFDGTIENMHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRISK 735

Query: 701  GFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSEL 522
            G+AIIV+RGKDY+RPS++RPKNLLTKR+ALARSIELQR EAL +H+S L  +V+++RSE+
Sbjct: 736  GYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRREALVKHVSALQAKVDKIRSEI 795

Query: 521  DQMEDVKDRGDENLYAKLDSAY 456
            DQM  ++++GDE  Y +LDS+Y
Sbjct: 796  DQMHSMEEQGDEEFYDRLDSSY 817


>gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  822 bits (2124), Expect = 0.0
 Identities = 443/739 (59%), Positives = 534/739 (72%), Gaps = 24/739 (3%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQALSSD-------DDDVGTSRSAGSSTMQKIVD 2442
            +W+  W++     R  PK P  VL+Y+ + S +       + D G  R++  STM+KIV+
Sbjct: 89   SWIDKWNESHKHNR--PKPPRAVLDYQSSESGNLSGSGYAEGDGGGGRNSSGSTMEKIVE 146

Query: 2441 KLKKFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE--------- 2289
            KLKKFGY+              +   +GSVEDIF+ E+G LPNSRGG S E         
Sbjct: 147  KLKKFGYVDDSNENKGEVRDSVIE--KGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVF 204

Query: 2288 ----EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKIS 2121
                +VRFPWE+PK        S R+K S+TSLAELTLPE ELRRL +L  + K KT+I 
Sbjct: 205  GGDGKVRFPWEKPKEEEKQEEGSVRRK-SRTSLAELTLPESELRRLTNLTFQKKHKTRIG 263

Query: 2120 GAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLY 1941
            G GVT+ +V++IHE+WKT E+VRLK +GPPALNMKRMHEILERKTGGLVIWRSGTS+SLY
Sbjct: 264  GGGVTQAVVEMIHERWKTSEIVRLKIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLY 323

Query: 1940 RGVTYEVP--QLVKKQYLSSGVNS--LSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEK 1773
            RGV+YEVP  +L K+ Y  + ++S  L    +  +GD  +     NV+   E      ++
Sbjct: 324  RGVSYEVPSVKLNKRIYKKNDISSAPLPTVADKSVGDFAELASYSNVKTPQEKSENTSQE 383

Query: 1772 EQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYG 1593
            +++     E+KYEDEV+KLLD LGPR+ DW G DPLPVDAD+LP +VPGY PPFR+LPYG
Sbjct: 384  KEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYG 443

Query: 1592 VRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLT 1413
            VRS LGLKE+T        LPPHFALGRSRQ +GLA AM KLWE S IAKI LKR VQLT
Sbjct: 444  VRSTLGLKEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLT 503

Query: 1412 TSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXX 1233
            TSERMAEDI++LTGG +LSRNKD+LVFYRGK+FLSP               LQDEEEQ  
Sbjct: 504  TSERMAEDIKRLTGGVMLSRNKDFLVFYRGKNFLSPDVTEALLERERLAKSLQDEEEQAR 563

Query: 1232 XXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRK 1053
                          +  G AGTLGETL+ADA+WG +L K+   K+++ A++ RHA L+RK
Sbjct: 564  LRASAMFIPNVEVAQHFGTAGTLGETLDADAKWGKRLDKE---KVMREADILRHAHLVRK 620

Query: 1052 LERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLG 873
            LERKL  AERKLM+AE AL+KVEE  KP++   DPESITDEERFMFRKLGLRMKAFLLLG
Sbjct: 621  LERKLSFAERKLMRAEQALSKVEESLKPSKQQADPESITDEERFMFRKLGLRMKAFLLLG 680

Query: 872  RRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFA 693
            RRGVFDGTVENMHLHWKYRELVKI+V AKTF QV+N+AL+LEAESGGVLVSVDKVSK FA
Sbjct: 681  RRGVFDGTVENMHLHWKYRELVKIMVNAKTFEQVKNIALALEAESGGVLVSVDKVSKKFA 740

Query: 692  IIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQM 513
            IIV+RGKDY RPS+LRPKNLLTKRKALARSIELQR EAL +HIS +  +V+ LRSE++QM
Sbjct: 741  IIVYRGKDYHRPSTLRPKNLLTKRKALARSIELQRQEALLKHISAVQSKVDTLRSEIEQM 800

Query: 512  EDVKDRGDENLYAKLDSAY 456
            + VKD+GDE LY KLDS+Y
Sbjct: 801  DSVKDQGDEALYNKLDSSY 819


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521988|gb|ESR33355.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score =  809 bits (2090), Expect = 0.0
 Identities = 443/766 (57%), Positives = 531/766 (69%), Gaps = 50/766 (6%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQ-----------ALSSDDDDVGTSRSAGSSTMQ 2454
            +WL  W++P    R  P  P   +NYR+              SD + VG     G STM 
Sbjct: 90   SWLVKWNKPNKYNRLKP--PQASVNYRKNNVDLSALGFARTDSDGNGVG-GVDDGGSTMG 146

Query: 2453 KIVDKLKKFGYIXXXXXXXXXXXXXPLRPAR----GSVEDIFFAEDGDLPNSRGGISPE- 2289
            KIV+KLKKFGY+                  R    GS+EDIF+ E+G LPN+RGG S E 
Sbjct: 147  KIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKES 206

Query: 2288 ------------EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIR 2145
                        EV+FPWE+ K    +G    +++ S+TSLAELTLPE ELRRLR+L  +
Sbjct: 207  PLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQ 266

Query: 2144 SKSKTKISGAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWR 1965
            +KSKT+I GAG+T+ +VD+IHEKWKT E+VRLK +G PALNMKRMHEILERKTGGLVIWR
Sbjct: 267  TKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWR 326

Query: 1964 SGTSISLYRGVTYEVP--QLVKKQYLSSGV--NSLSKAVNNHIGDRVQQNKDV------- 1818
            SGT++SLYRGV+YEVP  QL K+ Y  + +  +S+S+A +  I  ++  + +        
Sbjct: 327  SGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADK 386

Query: 1817 ------NVQYHLEDHVAPVE-----KEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSD 1671
                  N   +   HV  V      +EQ      E+KYEDEV KLLDGLGPRYTDW G D
Sbjct: 387  TAQDPSNFDSYNNVHVTQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCD 446

Query: 1670 PLPVDADLLPAVVPGYTPPFRILPYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEG 1491
            PLPVDAD+LP +VPGY PPFR+LPYGVRS L  KE+T        LPPHFALGRSRQ +G
Sbjct: 447  PLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQG 506

Query: 1490 LATAMVKLWESSSIAKIFLKRDVQLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFL 1311
            LA AM+KLWE SSIAKI LKR VQLTTSERM EDI+KLTGGTLLSRNKD+LVFYRGK+FL
Sbjct: 507  LAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFL 566

Query: 1310 SPXXXXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARWG 1131
            SP               LQDEEEQ                E+ G AGTL ETL+A++RWG
Sbjct: 567  SPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWG 626

Query: 1130 SKLGKDHADKMIKAAEVARHADLMRKLERKLFLAERKLMKAENALAKVEEFSKPAENATD 951
             +L   H + +++ AEV RHA L++KLE+KL  AERKL++AE AL+KVEE  KPAE   D
Sbjct: 627  KRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQAD 686

Query: 950  PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQV 771
            PESIT+EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK KTF Q 
Sbjct: 687  PESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 746

Query: 770  RNVALSLEAESGGVLVSVDKVSKGFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQ 591
            + +AL+LEAESGGVLVSVDK+SKG+A++V+RGKDY+RPS+LRPKNLLTKRKALARSIELQ
Sbjct: 747  KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 806

Query: 590  RHEALNRHISNLHKRVNQLRSELDQMEDVKDRGDENLYAKLDSAYS 453
            R EAL +H++ L     +LRSE++QM  VK  GDE LY KLDSAY+
Sbjct: 807  RQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYA 852


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521987|gb|ESR33354.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score =  809 bits (2090), Expect = 0.0
 Identities = 443/766 (57%), Positives = 531/766 (69%), Gaps = 50/766 (6%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQ-----------ALSSDDDDVGTSRSAGSSTMQ 2454
            +WL  W++P    R  P  P   +NYR+              SD + VG     G STM 
Sbjct: 90   SWLVKWNKPNKYNRLKP--PQASVNYRKNNVDLSALGFARTDSDGNGVG-GVDDGGSTMG 146

Query: 2453 KIVDKLKKFGYIXXXXXXXXXXXXXPLRPAR----GSVEDIFFAEDGDLPNSRGGISPE- 2289
            KIV+KLKKFGY+                  R    GS+EDIF+ E+G LPN+RGG S E 
Sbjct: 147  KIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKES 206

Query: 2288 ------------EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIR 2145
                        EV+FPWE+ K    +G    +++ S+TSLAELTLPE ELRRLR+L  +
Sbjct: 207  PLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQ 266

Query: 2144 SKSKTKISGAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWR 1965
            +KSKT+I GAG+T+ +VD+IHEKWKT E+VRLK +G PALNMKRMHEILERKTGGLVIWR
Sbjct: 267  TKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWR 326

Query: 1964 SGTSISLYRGVTYEVP--QLVKKQYLSSGV--NSLSKAVNNHIGDRVQQNKDV------- 1818
            SGT++SLYRGV+YEVP  QL K+ Y  + +  +S+S+A +  I  ++  + +        
Sbjct: 327  SGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADK 386

Query: 1817 ------NVQYHLEDHVAPVE-----KEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSD 1671
                  N   +   HV  V      +EQ      E+KYEDEV KLLDGLGPRYTDW G D
Sbjct: 387  TAQDPSNFDSYNNVHVTQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCD 446

Query: 1670 PLPVDADLLPAVVPGYTPPFRILPYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEG 1491
            PLPVDAD+LP +VPGY PPFR+LPYGVRS L  KE+T        LPPHFALGRSRQ +G
Sbjct: 447  PLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQG 506

Query: 1490 LATAMVKLWESSSIAKIFLKRDVQLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFL 1311
            LA AM+KLWE SSIAKI LKR VQLTTSERM EDI+KLTGGTLLSRNKD+LVFYRGK+FL
Sbjct: 507  LAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFL 566

Query: 1310 SPXXXXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARWG 1131
            SP               LQDEEEQ                E+ G AGTL ETL+A++RWG
Sbjct: 567  SPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWG 626

Query: 1130 SKLGKDHADKMIKAAEVARHADLMRKLERKLFLAERKLMKAENALAKVEEFSKPAENATD 951
             +L   H + +++ AEV RHA L++KLE+KL  AERKL++AE AL+KVEE  KPAE   D
Sbjct: 627  KRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQAD 686

Query: 950  PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQV 771
            PESIT+EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK KTF Q 
Sbjct: 687  PESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 746

Query: 770  RNVALSLEAESGGVLVSVDKVSKGFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQ 591
            + +AL+LEAESGGVLVSVDK+SKG+A++V+RGKDY+RPS+LRPKNLLTKRKALARSIELQ
Sbjct: 747  KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 806

Query: 590  RHEALNRHISNLHKRVNQLRSELDQMEDVKDRGDENLYAKLDSAYS 453
            R EAL +H++ L     +LRSE++QM  VK  GDE LY KLDSAY+
Sbjct: 807  RQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYA 852


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  807 bits (2084), Expect = 0.0
 Identities = 434/735 (59%), Positives = 524/735 (71%), Gaps = 20/735 (2%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQALSSDDDDVGTSRSAGS-STMQKIVDKLKKFG 2424
            +W  +W++P    + LP+ P  V +YR            S S+GS STM+KIV+KLKK G
Sbjct: 74   SWFFNWNKPNK--QNLPRTPQAVFDYRS---------NNSNSSGSGSTMEKIVEKLKKHG 122

Query: 2423 YIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE-------------EV 2283
            Y+              +   +GSVEDIF+ E+G LPN+RGG S E             EV
Sbjct: 123  YMDGDVNENKERMQERVIE-KGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEV 181

Query: 2282 RFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTR 2103
            RFPWE+PK    +G  + R K S+TSLAELTLPE ELRRLR+L   +KSKT++ G GVT+
Sbjct: 182  RFPWEKPKKEEDEGKWTARSK-SRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQ 240

Query: 2102 EIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYE 1923
            E+VD IH+KWKT E+ R+K +G PALNMKRMHEILE KTGGLVIWRSG ++SLYRGV+YE
Sbjct: 241  EVVDAIHDKWKTSEIARVKVEGAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYE 300

Query: 1922 VPQLVKKQYL----SSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVE--KEQNP 1761
             P L  K+ +     +  NSL  A +  IG + + + D  +          VE   ++  
Sbjct: 301  DPALKWKKRIFKKKETSSNSLPAATSITIGSQSKNSPDNEIHAPRPKTEINVEAANQKET 360

Query: 1760 GSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGVRSN 1581
             +  ++KYEDEV+KLLDGLGPRYTDW G DPLPVDAD+LP V+PGY PPFRILPYGVR  
Sbjct: 361  KTQTDVKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQPPFRILPYGVRPT 420

Query: 1580 LGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTTSER 1401
            LG ++ST        LPPHFA+GRSRQ +GLA AM+KLWE SSI K+ LKR VQLTTSER
Sbjct: 421  LGRQDSTSLRRLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSER 480

Query: 1400 MAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXXXXX 1221
            MAEDI+KLTGG LLSRNKD+LVFYRGKDFLSP               LQDEEEQ      
Sbjct: 481  MAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVSEALLERERLAKSLQDEEEQARLRAS 540

Query: 1220 XXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRKLERK 1041
                      EE GIAG+L ETL+ADA+WG +L   H +K+I+ AE+ RHA ++R+LE+K
Sbjct: 541  ALVIPSDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKK 600

Query: 1040 LFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLGRRGV 861
            L  A+RKL +AE  L KVE F KP+E   DPESITDEERFMFRKLGLRMKAFLLLGRRGV
Sbjct: 601  LAFAQRKLRRAERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGV 660

Query: 860  FDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFAIIVF 681
            FDGTVENMHLHWKYRELVKII+KAK+F QV+ +AL+LEAESGGVLVSVDK+SKG+AIIV+
Sbjct: 661  FDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVY 720

Query: 680  RGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQMEDVK 501
            RGKDY+RPS LRPKNLLTKRKALARSIE+QR EAL  H+S L  +V ++RSE++QM  VK
Sbjct: 721  RGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQMGFVK 780

Query: 500  DRGDENLYAKLDSAY 456
            D+GDE LY +LDSAY
Sbjct: 781  DKGDEELYDRLDSAY 795


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  806 bits (2081), Expect = 0.0
 Identities = 445/767 (58%), Positives = 527/767 (68%), Gaps = 51/767 (6%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQ-----------ALSSDDDDVGTSRSAGSSTMQ 2454
            +WL  W++P    R  P  P   +NYR+              SD + VG     G +TM 
Sbjct: 90   SWLVKWNKPNKYNRLKP--PQASVNYRKNNVDLSALGFARTDSDGNGVG-GVDDGGNTMG 146

Query: 2453 KIVDKLKKFGYIXXXXXXXXXXXXXPLRPAR----GSVEDIFFAEDGDLPNSRGGISPE- 2289
            KIV+KLKKFGY+                  R    GS+EDIF+ E+G LPN+RGG S E 
Sbjct: 147  KIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKES 206

Query: 2288 ------------EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIR 2145
                        EV+FPWE+ K    +G     K+ S+TSLAELTLPE ELRRLR+L  +
Sbjct: 207  PLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLV-KRSSRTSLAELTLPESELRRLRNLTFQ 265

Query: 2144 SKSKTKISGAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWR 1965
            +KSKT+I GAG+T+ +VD+IHEKWKT E+VRLK +G PALNMKRMHEILERKTGGLVIWR
Sbjct: 266  TKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWR 325

Query: 1964 SGTSISLYRGVTYEVP--QLVKKQY---------------------LSSGVNSLSKAVNN 1854
            SGT++SLYRGV+YEVP  QL K+ Y                     +S   NSLS A + 
Sbjct: 326  SGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADK 385

Query: 1853 HIGDRVQQNKDVNVQYHLEDHVAPVEKEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGS 1674
               D    +   NV +  + ++    +EQ      E+KYEDEV KLLDGLGPRYTDW G 
Sbjct: 386  TAQDPSNFDSYNNV-HATQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGC 444

Query: 1673 DPLPVDADLLPAVVPGYTPPFRILPYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHE 1494
            DPLPVDAD+LP +VPGY PPFR+LPYGVRS L  KE+T        LPPHFALGRSRQ +
Sbjct: 445  DPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQ 504

Query: 1493 GLATAMVKLWESSSIAKIFLKRDVQLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDF 1314
            GLA AM+KLWE SSIAKI LKR VQLTTSERM EDI+KLTGGTLLSRNKD+LVFYRGK+F
Sbjct: 505  GLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNF 564

Query: 1313 LSPXXXXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARW 1134
            LSP               LQDEEEQ                E+ G AGTL ETL+A++RW
Sbjct: 565  LSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRW 624

Query: 1133 GSKLGKDHADKMIKAAEVARHADLMRKLERKLFLAERKLMKAENALAKVEEFSKPAENAT 954
            G +L   H + +++ AEV RHA L++KLE+KL  AERKL++AE AL+KVEE  KPAE   
Sbjct: 625  GKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQA 684

Query: 953  DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQ 774
            DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK KTF Q
Sbjct: 685  DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQ 744

Query: 773  VRNVALSLEAESGGVLVSVDKVSKGFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIEL 594
             + +AL+LEAESGGVLVSVDK+SKG+A++V+RGKDY+RPS+LRPKNLLTKRKALARSIEL
Sbjct: 745  AKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIEL 804

Query: 593  QRHEALNRHISNLHKRVNQLRSELDQMEDVKDRGDENLYAKLDSAYS 453
            QR EAL +H++ L     +LRSE++QM  VK  GDE LY KLDSAY+
Sbjct: 805  QRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYA 851


>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
            gi|223543652|gb|EEF45180.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  805 bits (2079), Expect = 0.0
 Identities = 436/721 (60%), Positives = 519/721 (71%), Gaps = 22/721 (3%)
 Frame = -3

Query: 2459 MQKIVDKLKKFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE--- 2289
            M+KIV+KLKK GYI                  +GSVEDIF+ E+G+LPNSRGG S E   
Sbjct: 1    MEKIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEEGNLPNSRGGFSKESPL 60

Query: 2288 ----------EVRFPWEQPK--PAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIR 2145
                      EVRFPWE+PK      +   + R K S+T LAELTLPE ELRRLR+L  +
Sbjct: 61   GVEDVFKSNGEVRFPWEKPKREELEHEKKWTARSK-SRTQLAELTLPESELRRLRNLTYQ 119

Query: 2144 SKSKTKISGAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWR 1965
             KSK ++ GAGVT+E+VD IH++WKT E+VR+K +G PALNM+RMHEILERKTGGLVIWR
Sbjct: 120  IKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWR 179

Query: 1964 SGTSISLYRGVTYEVP------QLVKKQYLSSGVNSLSKAVNN-HIGDRVQQNKDVNVQY 1806
            SGTS+SLYRGV+YE P      Q++K+  LS+  NSLS A        +   + D+N+ +
Sbjct: 180  SGTSVSLYRGVSYEDPSVQLNKQILKRNELSN--NSLSTATGIIRSPSKSAASSDLNMPH 237

Query: 1805 HLEDHVAPVEKEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPG 1626
               D  A  E+++      E+KYEDEV+KLL+GLGPRYTDWAG DPLPVDAD+LP ++PG
Sbjct: 238  LNSDSTAEGEEKKEIEMETEVKYEDEVDKLLEGLGPRYTDWAGLDPLPVDADMLPGIIPG 297

Query: 1625 YTPPFRILPYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIA 1446
            Y PPFRILPYGVRS+LG KE+T        LPPHFALGRSRQ +GLA AM+KLWE SSIA
Sbjct: 298  YQPPFRILPYGVRSSLGQKEATSLRRLARILPPHFALGRSRQLQGLADAMIKLWEKSSIA 357

Query: 1445 KIFLKRDVQLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXX 1266
            KI LKR VQLTTSERMAEDI+KLTGG LLSRNKD+LVFYRGKDFLSP             
Sbjct: 358  KISLKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVTEALVERERLA 417

Query: 1265 XXLQDEEEQXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAA 1086
              LQD+EEQ                E+ G AGTL ETL+ADARWG  L ++H +K+++ A
Sbjct: 418  QSLQDKEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHREKIMREA 477

Query: 1085 EVARHADLMRKLERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKL 906
            E+ARHA+L+RKLE KL  AE+KLMKAE AL+KVE F KPAE   DPESITDEERFMFRKL
Sbjct: 478  EIARHANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEERFMFRKL 537

Query: 905  GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVL 726
            GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKII+KAK   QV+ +AL+LEAESGG+L
Sbjct: 538  GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALEAESGGIL 597

Query: 725  VSVDKVSKGFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKR 546
            VSVD+VSKG+AIIVFRGKDY+RPS LRP NLLTKRKALARSIE+QR EAL +HIS L K+
Sbjct: 598  VSVDRVSKGYAIIVFRGKDYQRPSKLRPGNLLTKRKALARSIEIQRSEALLKHISALQKK 657

Query: 545  VNQLRSELDQMEDVKDRGDENLYAKLDSAYSXXXXXXXXXXXXXXXXTFDTAGDFGSDEE 366
            V+++R E+ QME VKD+GDE LY +LD+ Y                  + + GD  S  +
Sbjct: 658  VDKIRYEIAQMEKVKDQGDEELYDRLDATYPTDDDDTEEEEDEAYLGAYISKGDANSAAD 717

Query: 365  D 363
            D
Sbjct: 718  D 718


>ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [Amborella trichopoda]
            gi|548841355|gb|ERN01418.1| hypothetical protein
            AMTR_s00002p00265220 [Amborella trichopoda]
          Length = 882

 Score =  803 bits (2073), Expect = 0.0
 Identities = 432/741 (58%), Positives = 517/741 (69%), Gaps = 26/741 (3%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYR---------QALSSDDDDVGTSRSAGSSTMQKI 2448
            +W+  W+   +  R LPKRP  VL+YR         + ++S DD++G    A  STM +I
Sbjct: 79   HWIHKWT--GSQCRNLPKRPKAVLDYRDNGVSSDEQEDINSKDDELGFEEEAEKSTMDQI 136

Query: 2447 VDKLKKFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE------- 2289
            VDKLK+FG++               RP RGSVED+F+AE G LPNSRGG+S +       
Sbjct: 137  VDKLKRFGFMDERKTGLDMER----RPERGSVEDVFYAEPGVLPNSRGGLSLDSPNGVLE 192

Query: 2288 ----EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKIS 2121
                EVRFPW++         +S RK +S+TSLAELTLP  E+RRL +LA+R K +TKI 
Sbjct: 193  RENGEVRFPWQRE--------VSVRKTRSRTSLAELTLPASEIRRLTNLALRMKGRTKIK 244

Query: 2120 GAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLY 1941
            GAGVT+ IVD IH+KWK+EE+VR+KC+G P LNMKR HEILERKTGGLVIWRSG+SI LY
Sbjct: 245  GAGVTQAIVDSIHKKWKSEEIVRIKCEGAPTLNMKRSHEILERKTGGLVIWRSGSSIVLY 304

Query: 1940 RGVTYEVPQ---LVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEKE 1770
            RG+ Y+V       K+  ++   N    A++   G   +     ++Q   E+    +E +
Sbjct: 305  RGINYDVSDEKPAKKQTQVNRNFNRNGSAIDEVNGSFSESVSSRDLQRFPEEKGVNIENK 364

Query: 1769 QNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGV 1590
                   ++ YE EV++LL+GLGPRY DWAG DPLPVDADLLP VVPGY PPFR+LPYG+
Sbjct: 365  TETEPPNKVNYEKEVDQLLEGLGPRYNDWAGCDPLPVDADLLPGVVPGYKPPFRLLPYGM 424

Query: 1589 RSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTT 1410
            R +LG  E T        LPPHFALGRSRQH+GLA AMVK+WE SSI KI LKR VQ T 
Sbjct: 425  RFSLGRTEMTTLRRLARVLPPHFALGRSRQHQGLAVAMVKVWEKSSIVKIALKRGVQNTC 484

Query: 1409 SERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXX 1230
             ERMAE I+ LTGGTLLSRNKD++VFYRGKDFLSP               LQDEEE    
Sbjct: 485  GERMAEQIKSLTGGTLLSRNKDFMVFYRGKDFLSPEVTEALLERERLAKALQDEEENARL 544

Query: 1229 XXXXXXXXXXXXXE---EVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLM 1059
                             E   +GTL ETLEA ARWG  L  +  +KMIKAAE  RHA L+
Sbjct: 545  YATASIISDVSTTTAKEEPRFSGTLSETLEASARWGKNLDSEEKEKMIKAAEATRHAGLV 604

Query: 1058 RKLERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLL 879
            RKLERKL LA++K M+AE ALAKVEEF KP + + D ESITDEERFMFRKLGLRMKA+LL
Sbjct: 605  RKLERKLDLAQQKAMRAEKALAKVEEFLKPTDQSRDQESITDEERFMFRKLGLRMKAYLL 664

Query: 878  LGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKG 699
            LG+RGVFDGTVENMHLHWKYREL+KII+KAK F  V+N+ALSLEAESGG+LVSVDK+SKG
Sbjct: 665  LGKRGVFDGTVENMHLHWKYRELIKIILKAKNFGHVKNIALSLEAESGGILVSVDKISKG 724

Query: 698  FAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELD 519
            +AIIV+RGK YKRP  LRP+NLLTKRKALARSIELQR EALN HISNL KRV  L+SEL 
Sbjct: 725  YAIIVYRGKGYKRPRLLRPQNLLTKRKALARSIELQRREALNNHISNLQKRVQTLKSELA 784

Query: 518  QMEDVKDRGDENLYAKLDSAY 456
            QME +K++GDE+LYAKLDS Y
Sbjct: 785  QMESIKEKGDEDLYAKLDSVY 805


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 838

 Score =  803 bits (2073), Expect = 0.0
 Identities = 446/749 (59%), Positives = 522/749 (69%), Gaps = 34/749 (4%)
 Frame = -3

Query: 2597 WLRSWSQPANPLRALPKRPPDVLNYRQA----------LSSDDDDVGTSRSAGSSTMQKI 2448
            WL+ W+QP++     PK P  VLNYR +           SSDD+D     + G STM +I
Sbjct: 61   WLKHWNQPSSKHNR-PKPPRAVLNYRNSGNGHSSKSHFSSSDDED-----NNGGSTMDRI 114

Query: 2447 VDKLKKFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE------- 2289
            V+KLKKFGY                   +GSVEDIF+ E+G LPN++GG S E       
Sbjct: 115  VEKLKKFGYDDDDDDEKKDHNTKERVIEKGSVEDIFYVEEGILPNTKGGFSSESPFGVGR 174

Query: 2288 ------EVRFPWEQPKPAAGDGGMSGRK---KQSKTSLAELTLPEGELRRLRHLAIRSKS 2136
                  EVRFPWE+ K    D     RK   K+SKTSLAELTLPE EL+RL  L    K 
Sbjct: 175  FGSDGGEVRFPWEK-KTVVDDEEEEDRKGLRKKSKTSLAELTLPESELKRLLKLTFEKKH 233

Query: 2135 KTKISGAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGT 1956
            KT+I G GVT+ +VD IHE+WKT E+VRLK +G  ALNMKRMHEILERKTGGLVIWRSG 
Sbjct: 234  KTRIGGGGVTQAVVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILERKTGGLVIWRSGN 293

Query: 1955 SISLYRGVTYEVPQLV-KKQYLSSGVNS---LSKAVNNHI--GDRVQQNKDVNVQYH-LE 1797
            S+SLYRGV+Y+ P +   KQ      NS   LSK  NN       +  N + N     LE
Sbjct: 294  SVSLYRGVSYKDPSIQHNKQLYRKSENSSKFLSKPSNNFAVKPSELTSNSETNTSLEKLE 353

Query: 1796 DHVAPVEKEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTP 1617
                  EK+  P    ++ YEDEV+KLLDGLGPRYTDW G +PLPVDAD+LP  VPGY P
Sbjct: 354  STNDQKEKDNLP----KLTYEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLPPTVPGYQP 409

Query: 1616 PFRILPYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIF 1437
            PFR+LP+GVR  LGLKE+T        LPPHFALGR+RQ +GLA AM+KLWE SSIAK+ 
Sbjct: 410  PFRVLPFGVRPTLGLKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVA 469

Query: 1436 LKRDVQLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXL 1257
            LKR VQLTTSERMAE+I+KLTGGT+LSRNKD+LVF+RGK FLS                +
Sbjct: 470  LKRGVQLTTSERMAEEIKKLTGGTILSRNKDFLVFFRGKSFLSSDVTEALLERERMAKAM 529

Query: 1256 QDEEEQXXXXXXXXXXXXXXXXE-EVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEV 1080
            QDEEEQ                E  V  AGTLGETL+ADA+WG  L + H  K+++  E 
Sbjct: 530  QDEEEQARLRASSLLIPAINTSELSVAEAGTLGETLDADAKWGKTLDERHKQKVMREVEQ 589

Query: 1079 ARHADLMRKLERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGL 900
             RHA+L+RKLE+KL LAERK+M+AE AL KVEE  KP+EN  DPESITDEERFMFRKLGL
Sbjct: 590  LRHANLVRKLEQKLSLAERKIMRAEKALMKVEESLKPSENTADPESITDEERFMFRKLGL 649

Query: 899  RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVS 720
            RMKAFLLLGRRGVFDGTVENMHLHWKYREL+KIIVKAK F QV+ +AL+LEAESGGVLVS
Sbjct: 650  RMKAFLLLGRRGVFDGTVENMHLHWKYRELIKIIVKAKNFEQVKKIALALEAESGGVLVS 709

Query: 719  VDKVSKGFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVN 540
            VDKVSKG++I+V+RGKDY+RPS+LRPKNLLTKRKALARSIELQRHEAL+ HIS L   + 
Sbjct: 710  VDKVSKGYSILVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEALSTHISTLQSNME 769

Query: 539  QLRSELDQMEDVKDRGDENLYAKLDSAYS 453
            +LRSE++QME VK+ GDE LY KLDSAYS
Sbjct: 770  KLRSEIEQMEKVKEEGDEALYNKLDSAYS 798


>gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]
          Length = 856

 Score =  801 bits (2070), Expect = 0.0
 Identities = 441/742 (59%), Positives = 526/742 (70%), Gaps = 27/742 (3%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQ-----ALS-SDDDDVGTSRSAGSSTMQKIVDK 2439
            NWL SW++        PK P  V NYR+     +LS S  D+ G S    SSTM+KIV+K
Sbjct: 86   NWLDSWNKTHKGFG--PKPPKTVFNYRKKGDVWSLSYSQSDNNGRS---SSSTMEKIVEK 140

Query: 2438 LKKFGYIXXXXXXXXXXXXXPLRPA-RGSVEDIFFAEDGDLPNSRGGISPE--------- 2289
            LKKFGYI             P R   RGS+EDIF+ E+G LPN+RGG S E         
Sbjct: 141  LKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVF 200

Query: 2288 ----EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKIS 2121
                EVRFPWE+ K    +GG + R+  SKTSLAELTLPE ELRRLR+L  R+KSK +I 
Sbjct: 201  GSDGEVRFPWEKRKEDEEEGGWTARR-DSKTSLAELTLPESELRRLRNLTFRTKSKVRIK 259

Query: 2120 GAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLY 1941
            GAGVT+E+VD IHEKWKTEE+VRLK +G PALNMKRMHEILERKTGGLVIWRSGTS+SLY
Sbjct: 260  GAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLY 319

Query: 1940 RGVTYEVPQLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAP------- 1782
            RGV+YEVP +    +LS  +   ++     +     + KD++     +D V+P       
Sbjct: 320  RGVSYEVPSV----HLSKRIYKRNETFTYALPSVSDKTKDLSSLGSHKDVVSPQANSETA 375

Query: 1781 VEKEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRIL 1602
             E  ++  S  EI+YEDEV+KLL+GLGPRYTDW G +PLPVDADLLP +V GY PPFR+L
Sbjct: 376  AEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVL 435

Query: 1601 PYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDV 1422
            PYGVRS+LGLKE+T        LPPHFA+GRSRQ +GLA AM+KLWE SSIAKI LKR V
Sbjct: 436  PYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGV 495

Query: 1421 QLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEE 1242
            QLTTSERMAEDI+KLTGG LLSRNKD+LVFYRGK+FLS                LQDEEE
Sbjct: 496  QLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSADVAEALVERERLAKSLQDEEE 555

Query: 1241 QXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADL 1062
            Q                E+ G AGTLGETL+ADARWG +L   H +K++K AE+ RHA+L
Sbjct: 556  QARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANL 615

Query: 1061 MRKLERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFL 882
            +RKL++ L  A+RKL+KAE AL KVE++ KPA+   DPESITDEERFMFRKLGLRMKAFL
Sbjct: 616  VRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPESITDEERFMFRKLGLRMKAFL 675

Query: 881  LLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSK 702
            LLGRRGVFDGT+ENMHLHWKYRELVKII+KAKTF QV+ VAL+LEAESGGVLVSVD++SK
Sbjct: 676  LLGRRGVFDGTIENMHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRISK 735

Query: 701  GFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSEL 522
            G+AIIV+RGKDY+RPS++RPKNLLTKR+ALARSIELQR E                    
Sbjct: 736  GYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRRE-------------------- 775

Query: 521  DQMEDVKDRGDENLYAKLDSAY 456
            DQM  ++++GDE  Y +LDS+Y
Sbjct: 776  DQMHSMEEQGDEEFYDRLDSSY 797


>tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
          Length = 1523

 Score =  800 bits (2066), Expect = 0.0
 Identities = 448/796 (56%), Positives = 536/796 (67%), Gaps = 34/796 (4%)
 Frame = -3

Query: 2654 PPPG------PALRRRHSP---------PDPPPNWLRSWSQPANPLRALPKRPPDVLNYR 2520
            PPP       PA   RH P            P  WL SWS P    R   + PP  L+ R
Sbjct: 678  PPPSMAMASSPACHFRHPPRLRLLLPLSTSAPHPWLYSWSHPRQ--RGRLRAPPAALDLR 735

Query: 2519 -----QALSSDDDDVGTSRSAGSSTMQKIVDKLKKFGYIXXXXXXXXXXXXXPLRPARGS 2355
                  + S D+D VG SRS+G STM  I+ +L++ GY                 P RGS
Sbjct: 736  PEPSPSSDSDDEDAVGASRSSGRSTMSLILSRLRRAGYSGEDPRAAAPP-----HPPRGS 790

Query: 2354 VEDIFFAEDGDLPNSRGGISPEE-------VRFPWEQPKPAAGDGGMSGRKKQSKTSLAE 2196
            VED+F A+DG LPN+RGG   ++        RFPWE+P P       S R   S T +AE
Sbjct: 791  VEDVFRADDGVLPNARGGFDADDEERALGDARFPWERPMPPPEAAPRSAR---SPTWMAE 847

Query: 2195 LTLPEGELRRLRHLAIRSKSKTKISGAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMK 2016
            LTLP  ELRRLRH AIR KS+TK+ GAGVTREIV+ I EKWKTEEVVR+K  G PALNM+
Sbjct: 848  LTLPAAELRRLRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMR 907

Query: 2015 RMHEILERKTGGLVIWRSGTSISLYRGVTYEVPQLVKKQYLSSGVNSLSKAVNNHIGDRV 1836
              HEILERKTGGLVIWRSGTS+SLYRGV Y+ P+  KK   +S   ++   +       +
Sbjct: 908  LFHEILERKTGGLVIWRSGTSVSLYRGVDYDEPEPTKKSKKNSQSLAMDFPIKGSSNPSL 967

Query: 1835 QQNKDVN-VQYHLEDHVAPVEKEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPV 1659
               +  N V+      V+   KE+      EIKYEDE++KLLD LGPRYTDW GSDPLPV
Sbjct: 968  LPTETANSVRDSNVALVSNAAKEELVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPV 1027

Query: 1658 DADLLPAVVPGYTPPFRILPYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATA 1479
            DADLLPA +PGY PPFR+LPYGVR +L  +++T        LPPHFALGRSRQ +GLA A
Sbjct: 1028 DADLLPANMPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLANA 1087

Query: 1478 MVKLWESSSIAKIFLKRDVQLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXX 1299
            MVKLWE SSIAKI LKR VQLTTSERMAEDI+KLTGG +LSRN +++VFYRGKDFLS   
Sbjct: 1088 MVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSEL 1147

Query: 1298 XXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLG 1119
                         LQDEEE                   V  AGTLGETLEA++++G+K  
Sbjct: 1148 AEVLLERERLAKSLQDEEEARRKAASYFSSAETYAQPTV--AGTLGETLEANSKYGTKHD 1205

Query: 1118 KDHADKMIKAAEVARHADLMRKLERKLFLAERKLMKAENALAKVEEFSKPAENATDPESI 939
            ++HADKM +  E ARHADL+RKLE KL LA++K+ KAE  L KVE   +P E++  PE+I
Sbjct: 1206 ENHADKMARTIEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETI 1265

Query: 938  TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVA 759
            TDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI+VKAK+FA V+ +A
Sbjct: 1266 TDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIA 1325

Query: 758  LSLEAESGGVLVSVDKVSKGFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEA 579
            LSLEAESGG+LVSVDKVSKG+AI+VFRGK+Y+RPSSLRP+NLL+KRKALARSIELQRH+A
Sbjct: 1326 LSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQA 1385

Query: 578  LNRHISNLHKRVNQLRSELDQMEDVKDRGDENLYAKLDSAYSXXXXXXXXXXXXXXXXTF 399
            L+RH + L+++V +L++EL QMEDVK++GDE LYAKLD+AYS                 F
Sbjct: 1386 LSRHFAKLNRKVERLKAELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDEAYLKRF 1445

Query: 398  D------TAGDFGSDE 369
            D      TA D GSD+
Sbjct: 1446 DNEVAGATADDDGSDD 1461


>ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|gb|ABU96081.1| CRM family
            member 3 [Zea mays]
          Length = 842

 Score =  798 bits (2062), Expect = 0.0
 Identities = 445/786 (56%), Positives = 533/786 (67%), Gaps = 28/786 (3%)
 Frame = -3

Query: 2642 PALRRRHSP---------PDPPPNWLRSWSQPANPLRALPKRPPDVLNYR-----QALSS 2505
            PA   RH P            P  WL SWS P    R   + PP  L+ R      + S 
Sbjct: 7    PACHFRHPPRLRLLLPLSTSAPHPWLYSWSHPRQ--RGRLRAPPAALDLRPEPSPSSDSD 64

Query: 2504 DDDDVGTSRSAGSSTMQKIVDKLKKFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDG 2325
            D+D VG SRS+G STM  I+ +L++ GY                 P RGSVED+F A+DG
Sbjct: 65   DEDAVGASRSSGRSTMSLILSRLRRAGYSGEDPRAAAPP-----HPPRGSVEDVFRADDG 119

Query: 2324 DLPNSRGGISPEE-------VRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRR 2166
             LPN+RGG   ++        RFPWE+P P       S R   S T +AELTLP  ELRR
Sbjct: 120  VLPNARGGFDADDEERALGDARFPWERPMPPPEAAPRSAR---SPTWMAELTLPAAELRR 176

Query: 2165 LRHLAIRSKSKTKISGAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKT 1986
            LRH AIR KS+TK+ GAGVTREIV+ I EKWKTEEVVR+K  G PALNM+  HEILERKT
Sbjct: 177  LRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKT 236

Query: 1985 GGLVIWRSGTSISLYRGVTYEVPQLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVN-VQ 1809
            GGLVIWRSGTS+SLYRGV Y+ P+  KK   +S   ++   +       +   +  N V+
Sbjct: 237  GGLVIWRSGTSVSLYRGVDYDEPEPTKKSKKNSQSLAMDFPIKGSSNPSLLPTETANSVR 296

Query: 1808 YHLEDHVAPVEKEQNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVP 1629
                  V+   KE+      EIKYEDE++KLLD LGPRYTDW GSDPLPVDADLLPA +P
Sbjct: 297  DSNVALVSNAAKEELVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANMP 356

Query: 1628 GYTPPFRILPYGVRSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSI 1449
            GY PPFR+LPYGVR +L  +++T        LPPHFALGRSRQ +GLA AMVKLWE SSI
Sbjct: 357  GYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSI 416

Query: 1448 AKIFLKRDVQLTTSERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXX 1269
            AKI LKR VQLTTSERMAEDI+KLTGG +LSRN +++VFYRGKDFLS             
Sbjct: 417  AKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERL 476

Query: 1268 XXXLQDEEEQXXXXXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKA 1089
               LQDEEE                   V  AGTLGETLEA++++G+K  ++HADKM + 
Sbjct: 477  AKSLQDEEEARRKAASYFSSAETYAQPTV--AGTLGETLEANSKYGTKHDENHADKMART 534

Query: 1088 AEVARHADLMRKLERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRK 909
             E ARHADL+RKLE KL LA++K+ KAE  L KVE   +P E++  PE+ITDEERFMFRK
Sbjct: 535  IEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRK 594

Query: 908  LGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGV 729
            LGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI+VKAK+FA V+ +ALSLEAESGG+
Sbjct: 595  LGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGI 654

Query: 728  LVSVDKVSKGFAIIVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHK 549
            LVSVDKVSKG+AI+VFRGK+Y+RPSSLRP+NLL+KRKALARSIELQRH+AL+RH + L++
Sbjct: 655  LVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNR 714

Query: 548  RVNQLRSELDQMEDVKDRGDENLYAKLDSAYSXXXXXXXXXXXXXXXXTFD------TAG 387
            +V +L++EL QMEDVK++GDE LYAKLD+AYS                 FD      TA 
Sbjct: 715  KVERLKAELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDEAYLKRFDNEVAGATAD 774

Query: 386  DFGSDE 369
            D GSD+
Sbjct: 775  DDGSDD 780


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  798 bits (2060), Expect = 0.0
 Identities = 434/735 (59%), Positives = 525/735 (71%), Gaps = 20/735 (2%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQALSSDDDDVGTSRSAGSSTMQKIVDKLKKFGY 2421
            +W+  W+      +  P+RP  VL+Y+   S++  ++ +  + G STM KIV+KLKKFGY
Sbjct: 80   SWIDRWNDSRK--QHGPRRPRAVLDYQ---SNESGNLSSDGNDGGSTMDKIVEKLKKFGY 134

Query: 2420 IXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGG---ISP-----------EEV 2283
            I              +   +GSVEDIF+ E+G LPNSRGG   +SP            EV
Sbjct: 135  IAEDKNEGRGEVRERVIE-KGSVEDIFYVEEGMLPNSRGGFSGVSPLGTEDVFGDGGGEV 193

Query: 2282 RFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTR 2103
            RFPWE+P+    + G S R++ S+TSLAELTLPE ELRRLR+L  + K KTKI GAGVT+
Sbjct: 194  RFPWEKPREREKEEGGSIRRR-SRTSLAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQ 252

Query: 2102 EIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYE 1923
             +V++IHE+WKT E+VRLK +GPPALNMKRMHEILERKTGGLV+WRSGTS+SLYRGV+YE
Sbjct: 253  AVVEMIHERWKTAEIVRLKIEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYE 312

Query: 1922 VP------QLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEKEQNP 1761
            VP      Q+ K+  +SS   SL    +  + +        NV+  LE      ++ ++ 
Sbjct: 313  VPSVQLNKQIFKRNEISS--TSLPTVADKSVAEPYVCATYSNVKTPLEMSENASQETEDT 370

Query: 1760 GSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGVRSN 1581
                E+KYEDEV++LLD +GPR+ DW G DPLPVDAD+LP +VPG+ PPFRILPYGVRS 
Sbjct: 371  EQLPEVKYEDEVDELLDSIGPRFKDWPGCDPLPVDADMLPGIVPGFQPPFRILPYGVRST 430

Query: 1580 LGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTTSER 1401
            LGLKE+T        LPPHFALGR+RQ +GLA AM KLWE S IAKI LKR VQLTTSER
Sbjct: 431  LGLKEATSLRRLARVLPPHFALGRNRQLQGLAVAMSKLWERSLIAKIALKRGVQLTTSER 490

Query: 1400 MAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXXXXX 1221
            MAEDI+KLTGG LLSRNKD+LVFYRGK+FLS                LQDEEEQ      
Sbjct: 491  MAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSAEVTEALVERERLAKSLQDEEEQARLRAS 550

Query: 1220 XXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRKLERK 1041
                      +  G AGTLGETL+ADA+WG +L   H +K+ + A + RHA L+RKLE+K
Sbjct: 551  AMVMPSIEPAQHFGTAGTLGETLDADAKWGKRLDVHHKEKVTQEAGILRHAKLVRKLEQK 610

Query: 1040 LFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLGRRGV 861
            L  AERKLM AE AL+KVEE  KP++   DPESITDEERFMFRKLGL+MKAFLLLGRRGV
Sbjct: 611  LAFAERKLMGAEQALSKVEESLKPSKQQADPESITDEERFMFRKLGLKMKAFLLLGRRGV 670

Query: 860  FDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFAIIVF 681
            FDGTVENMHLHWKYRELVKI+V AK F QV+ +AL+LEAESGGVLVSVDKVSK +AIIV+
Sbjct: 671  FDGTVENMHLHWKYRELVKIMVNAKNFDQVKKIALALEAESGGVLVSVDKVSKKYAIIVY 730

Query: 680  RGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQMEDVK 501
            RG DY+RPS LRPKNLLTKRKALARSIELQR EAL +HI+ +  RV++LRSE++QM+ VK
Sbjct: 731  RGNDYQRPSMLRPKNLLTKRKALARSIELQRQEALLKHIAAVQSRVDRLRSEIEQMDTVK 790

Query: 500  DRGDENLYAKLDSAY 456
              GDE LY KLDS Y
Sbjct: 791  HHGDEALYNKLDSCY 805


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 835

 Score =  796 bits (2057), Expect = 0.0
 Identities = 432/738 (58%), Positives = 518/738 (70%), Gaps = 23/738 (3%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNY-------RQALSSDDDDVGTSRSAGSSTMQKIVD 2442
            +WL+ W+ P N   A PK P  VL+Y       +  L+S D++ G   + GS TM +IV+
Sbjct: 63   HWLKRWNDPTNN-HARPKPPCAVLDYSENGHASKSGLASSDEEGGDGNTGGS-TMDRIVE 120

Query: 2441 KLKKFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE--------- 2289
            KLKKFGY+                  +GSVEDIF+ E+G LPNSRGG S E         
Sbjct: 121  KLKKFGYVEDGIQNKERVIE------KGSVEDIFYVEEGMLPNSRGGFSSESPLGFGSFG 174

Query: 2288 ----EVRFPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKIS 2121
                EVRFPWE+P     +   S R + SKTSLAELTLPE EL+RL  L    K KT+I 
Sbjct: 175  SDDREVRFPWEKPVVEELEERKSMRSR-SKTSLAELTLPESELKRLLKLTFEKKHKTRIG 233

Query: 2120 GAGVTREIVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLY 1941
             +GVT+ +VD IHE+WKT E+VRLK +G  ALNMKRMHEILERKTGGLVIWRSG S+SLY
Sbjct: 234  RSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSGNSVSLY 293

Query: 1940 RGVTYEVPQLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEK---E 1770
            RGV+YEVP + + + +     + SK +     + V    D+         +A +E    E
Sbjct: 294  RGVSYEVPSVQQNKKIYRKSENSSKLLPTPSYNSVGNPSDIASNSGTSAPLAKLESTNDE 353

Query: 1769 QNPGSFLEIKYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGV 1590
            +      ++ YE EV+KLLDGLGPRYTDW G DPLPVDAD+LP  VPGY PPFR+LP+GV
Sbjct: 354  KERDYLPKVNYEHEVDKLLDGLGPRYTDWPGCDPLPVDADMLPVTVPGYQPPFRVLPFGV 413

Query: 1589 RSNLGLKESTXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTT 1410
            R+ LGL+E+T        LPPHFALGR+RQ +GLA AM+KLWE SSIAK+ LKR VQLTT
Sbjct: 414  RATLGLREATALRRIARTLPPHFALGRNRQLQGLAVAMIKLWEISSIAKVALKRGVQLTT 473

Query: 1409 SERMAEDIRKLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXX 1230
            SERMAE+I+KLTGG LLSRNKD+LVF+RGK+FLS                +QDEEEQ   
Sbjct: 474  SERMAEEIKKLTGGILLSRNKDFLVFFRGKNFLSADVTQALLERERMAKVMQDEEEQARL 533

Query: 1229 XXXXXXXXXXXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRKL 1050
                         E    AGTLGETL+ADA+WG  L + H  K+++  E  RHA+L++KL
Sbjct: 534  RASSLLIPTNNTSELSAEAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRHANLVKKL 593

Query: 1049 ERKLFLAERKLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLGR 870
            E+KL  AERKL +AE AL KVE F KP+E   DPESITDEERFMFRKLGLRMKAFLLLGR
Sbjct: 594  EQKLSFAERKLRRAEKALMKVESFLKPSEYKADPESITDEERFMFRKLGLRMKAFLLLGR 653

Query: 869  RGVFDGTVENMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFAI 690
            RGVFDGT+ENMHLHWKYRELVKIIVKAKTF QV+ +AL+LEAESGGVLVSVDKVSKG+++
Sbjct: 654  RGVFDGTIENMHLHWKYRELVKIIVKAKTFEQVKKIALALEAESGGVLVSVDKVSKGYSV 713

Query: 689  IVFRGKDYKRPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQME 510
            IV+RGKDY+RPS+LRPKNLLTKRKALARSIELQRHEAL  HIS L  +V ++RSE++QME
Sbjct: 714  IVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSEIEQME 773

Query: 509  DVKDRGDENLYAKLDSAY 456
             VKD+GDE LY KLDSAY
Sbjct: 774  KVKDKGDEALYDKLDSAY 791


>ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
            gi|241936876|gb|EES10021.1| hypothetical protein
            SORBIDRAFT_05g022980 [Sorghum bicolor]
          Length = 895

 Score =  796 bits (2057), Expect = 0.0
 Identities = 434/730 (59%), Positives = 519/730 (71%), Gaps = 12/730 (1%)
 Frame = -3

Query: 2606 PPNWLRSWSQPANPLRA-LPKRPPDVLNYR-----QALSSDDDDVGTSRSAGSSTMQKIV 2445
            P  WL +WS P    R+ L   PP  L+ R      + S D+D VGTSRS+G STM  I+
Sbjct: 28   PYPWLSAWSHPGQRSRSRLRAPPPPALDLRPEPSPSSDSDDEDAVGTSRSSGRSTMSLIL 87

Query: 2444 DKLKKFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPEE-----VR 2280
             +L++ GY                 P RGSVED+F A+DG LPN+RGG    +      R
Sbjct: 88   SRLRRAGYSPAEDPRAAAASSH--HPPRGSVEDVFRADDGVLPNARGGFDAADEELGDAR 145

Query: 2279 FPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTRE 2100
            FPWE+P P         R  +S T +AELTLP  ELRRLRH AIR KS+TK+ GAGVTRE
Sbjct: 146  FPWERPMPPPE--AAPPRATRSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTRE 203

Query: 2099 IVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYEV 1920
            IV+ I EKWKTEEVVR+K  G PALNM+  HEILERKTGGLVIWRSGTS+SLYRGV Y+ 
Sbjct: 204  IVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVDYDE 263

Query: 1919 PQLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVN-VQYHLEDHVAPVEKEQNPGSFLEI 1743
            P+  K    +S   S+   +       +   +  N VQ      V+   KE+      EI
Sbjct: 264  PETTKGSKKNSQSLSMKSPIKGSPNPPLPPTEKANSVQDRNGPLVSNAGKEEIVVQAPEI 323

Query: 1742 KYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGVRSNLGLKES 1563
            KYEDE++KLLD LGPRYTDW GSDPLPVDADLLPA VPGY PPFR+LPYGVR +L   ++
Sbjct: 324  KYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPATVPGYKPPFRVLPYGVRPSLSRMDT 383

Query: 1562 TXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTTSERMAEDIR 1383
            T        LPPHFALGRSRQ +GLA AMVKLWE SSIAK+ LKR VQLTTSERMAEDI+
Sbjct: 384  TNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSIAKVALKRGVQLTTSERMAEDIK 443

Query: 1382 KLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXX 1203
            KLTGG +LSRN +++VFYRGKDFLS                LQDEEE             
Sbjct: 444  KLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERLAKSLQDEEEARRKAASYFSSSA 503

Query: 1202 XXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRKLERKLFLAER 1023
                +   +AGTLGETLEA++++G+KL ++H DKM +  E ARHADL+RKLE KL LA++
Sbjct: 504  EKYVQPT-VAGTLGETLEANSKYGTKLDENHEDKMARTVEAARHADLVRKLEWKLSLAQK 562

Query: 1022 KLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVE 843
            K+ KAE  L KVE   +P E++  PE+ITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+E
Sbjct: 563  KMEKAERVLGKVETALRPTEDSR-PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIE 621

Query: 842  NMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFAIIVFRGKDYK 663
            NMHLHWKYRELVKI+VKAK+FA V+ +ALSLEAESGG+LVSVDKVSKG+AI+VFRGK+Y+
Sbjct: 622  NMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYR 681

Query: 662  RPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQMEDVKDRGDEN 483
            RPSSLRP+NLL+KRKALARSIELQRH+AL+RH + L+++V QL++EL QMEDVKD+GDE 
Sbjct: 682  RPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVAQLKAELVQMEDVKDQGDEE 741

Query: 482  LYAKLDSAYS 453
            LYAKLD+AYS
Sbjct: 742  LYAKLDAAYS 751


>dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  795 bits (2052), Expect = 0.0
 Identities = 438/729 (60%), Positives = 516/729 (70%), Gaps = 14/729 (1%)
 Frame = -3

Query: 2597 WLRSWSQPANPLRALPKRPPDVLNYRQALS----SDDDD-VGTSRSAGSSTMQKIVDKLK 2433
            WL +WS+P   LR     P   L+ R   S    SDD+D VGTSR +G STM  I+ +LK
Sbjct: 48   WLSAWSRPRRGLRP----PAPALDLRPEPSPTSGSDDEDAVGTSRHSGRSTMSLILHRLK 103

Query: 2432 KFGYIXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPE------EVRFPW 2271
            + GY                 P RGSVED+F A+DG LPN+RGG   +      + RFPW
Sbjct: 104  RAGYSLEAQIPPSTFSQ---HPRRGSVEDVFRADDGVLPNARGGFDDDAESSLMDARFPW 160

Query: 2270 EQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTREIVD 2091
            E+P P       + R  +S   +AELTLPE ELRRLRH A+R KSKT++ GAGVTREIV 
Sbjct: 161  ERPMPPPE---AAARAARSPAWMAELTLPEPELRRLRHAAMRIKSKTQVGGAGVTREIVA 217

Query: 2090 LIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYEVPQL 1911
             I EKW+T+EVVR+K  G PALNM+  HEILERKTGGLVIWRSGTS+SLYRGV Y+VP  
Sbjct: 218  KIKEKWRTDEVVRVKVNGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDVPDT 277

Query: 1910 VK---KQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEKEQNPGSFLEIK 1740
             K   + +   G+ S  K     I   +   K  ++Q      V+  EKE+   +  EIK
Sbjct: 278  TKGTNRTWQDVGMKSSIKGPP--IPSSIPNEKVNSMQGSNGGLVSNTEKEEAIETVPEIK 335

Query: 1739 YEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGVRSNLGLKEST 1560
            YE+E+ +LLD LGPRY+DW GS+PLPVDADLLPA +PGY PPFR+LPYGVR +L  K++T
Sbjct: 336  YEEEIGRLLDELGPRYSDWPGSNPLPVDADLLPATIPGYKPPFRVLPYGVRRSLSRKDTT 395

Query: 1559 XXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTTSERMAEDIRK 1380
                    LPPHFALGRSRQ +GLA AMVKLWE SSIAK+ LKR VQLTTSERMAEDI+K
Sbjct: 396  NLRRLARGLPPHFALGRSRQLQGLAAAMVKLWERSSIAKVALKRGVQLTTSERMAEDIKK 455

Query: 1379 LTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXXX 1200
            LTGG +LSRN D++VFYRGKDFLS                LQDEE Q             
Sbjct: 456  LTGGVMLSRNNDFVVFYRGKDFLSTELAEALLERERSMKSLQDEE-QARLNAKLSFTSST 514

Query: 1199 XXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRKLERKLFLAERK 1020
                E  +AGTLGETLEA++++G++L  +H DKM +  E A+HADL+RKLE KL LAE++
Sbjct: 515  EAFIESTVAGTLGETLEANSKYGNELVDNHVDKMTRTVEAAKHADLVRKLEWKLALAEKR 574

Query: 1019 LMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVEN 840
            + KAE  L KVE   KP E+   PE+ITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+EN
Sbjct: 575  IAKAERVLGKVETALKPTEDTKPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIEN 634

Query: 839  MHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFAIIVFRGKDYKR 660
            MHLHWKYRELVKI+VKAK+FA V+  ALSLE ESGGVLVSVDKVSKG+AI+VFRGKDYKR
Sbjct: 635  MHLHWKYRELVKILVKAKSFADVKRTALSLEVESGGVLVSVDKVSKGYAIVVFRGKDYKR 694

Query: 659  PSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQMEDVKDRGDENL 480
            PS LRP+NLL+KRKALARSIELQR EAL RHI  L++RVNQLRSEL QMEDVKD+GDE L
Sbjct: 695  PSMLRPRNLLSKRKALARSIELQRMEALGRHIEKLNRRVNQLRSELVQMEDVKDQGDEEL 754

Query: 479  YAKLDSAYS 453
            YAKLDSAYS
Sbjct: 755  YAKLDSAYS 763


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score =  789 bits (2038), Expect = 0.0
 Identities = 431/762 (56%), Positives = 516/762 (67%), Gaps = 14/762 (1%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQALSSDDDDVGTSRSAGSSTMQKIVDKLKKFGY 2421
            +WL  W+   N ++   K+   VLNYR + + D        S   STM +IV+KLKKFGY
Sbjct: 110  SWLGKWNGTRNDIKL--KKAQIVLNYRNS-NGDTSGSDCEESISGSTMDRIVEKLKKFGY 166

Query: 2420 IXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPEE-------------VR 2280
                               +GS+EDIFF E+G LPN RGG S E              VR
Sbjct: 167  ADEATEKEKKEKRVV---EKGSIEDIFFVEEGILPNVRGGFSEESPFGDENVIAKDGVVR 223

Query: 2279 FPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTRE 2100
            FPWE+P     +   +    +S+T LAELTLP  ELRRL +LA+R K+K++I+GAGVT++
Sbjct: 224  FPWERPLVKKEES--NSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQ 281

Query: 2099 IVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYEV 1920
            +V+ I EKWKT EVVRLK +G PALNMKRMHEILERKTGGLVIWRSGTS++LYRGV+YE 
Sbjct: 282  VVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYET 341

Query: 1919 P-QLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEKEQNPGSFLEI 1743
            P + +KK+ +    + +    +  +     QN   +V    ED V   E+ +N     E+
Sbjct: 342  PSERMKKRIMRR--DEIRHKNSPIVDGESNQNPRNDVDSLREDSVDTSEENKNIDRQSEV 399

Query: 1742 KYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGVRSNLGLKES 1563
             YEDEV+KLLDGLGPRYTDW GS PLPVDADLLP +VPGY PPFRILPYGVRS L  +E+
Sbjct: 400  NYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREA 459

Query: 1562 TXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTTSERMAEDIR 1383
            T        LPPHFALGRSRQH+GLA+ MVKLW+ SSIAKI +KR VQLTTSERMAEDI+
Sbjct: 460  TALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIK 519

Query: 1382 KLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXX 1203
            KLTGG LLSRNKD+LVFYRGKDFLSP               LQDEEE+            
Sbjct: 520  KLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLLLTAG 579

Query: 1202 XXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRKLERKLFLAER 1023
                     AGTLGETL+ADARWG +L     + +++ AE+ RH DL+RKLE+KL  AER
Sbjct: 580  VTTINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAELLRHGDLVRKLEKKLAFAER 639

Query: 1022 KLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVE 843
            KLMKAE  L+KVEE   P +   +P+S+TDEERFMFRKLGLRMKAFLLLGRRG+FDGTVE
Sbjct: 640  KLMKAERVLSKVEETLNPLDRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVE 699

Query: 842  NMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFAIIVFRGKDYK 663
            NMHLHWKYRELVKI+VKAK F QV  +AL+LEAESGGVLVSVDKVSKG+AIIVFRGKDY 
Sbjct: 700  NMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFRGKDYS 759

Query: 662  RPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQMEDVKDRGDEN 483
            RP +LRPKNLLTKRKALARSIELQR EAL  HIS +  RV QL +E++Q+  +KD  D+ 
Sbjct: 760  RPPTLRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAEIEQLASLKDSTDDE 819

Query: 482  LYAKLDSAYSXXXXXXXXXXXXXXXXTFDTAGDFGSDEEDAD 357
            LY KL+SAYS                 FD   D  +  +D+D
Sbjct: 820  LYDKLNSAYSSEDEDSEEEGDDAYIEVFDNDNDVVNRSDDSD 861


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  789 bits (2037), Expect = 0.0
 Identities = 429/762 (56%), Positives = 516/762 (67%), Gaps = 14/762 (1%)
 Frame = -3

Query: 2600 NWLRSWSQPANPLRALPKRPPDVLNYRQALSSDDDDVGTSRSAGSSTMQKIVDKLKKFGY 2421
            +WL  W++  N ++   K+   VLNYR + + D        S   STM +IV+KLKKFGY
Sbjct: 110  SWLGKWNETRNDIKL--KKAQIVLNYRNS-NGDTSGSDCEESISGSTMDRIVEKLKKFGY 166

Query: 2420 IXXXXXXXXXXXXXPLRPARGSVEDIFFAEDGDLPNSRGGISPEE-------------VR 2280
                               +GS+EDIFF E+G LPN RGG S E              V 
Sbjct: 167  ADEATEKEKREKRVV---EKGSIEDIFFVEEGILPNVRGGFSEETPFGDENIIAKDGVVG 223

Query: 2279 FPWEQPKPAAGDGGMSGRKKQSKTSLAELTLPEGELRRLRHLAIRSKSKTKISGAGVTRE 2100
            FPWE  KP       +    +S+T LAELTLP  ELRRL +LA+R K+K++I+GAGVT++
Sbjct: 224  FPWE--KPLVKKEESNSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQ 281

Query: 2099 IVDLIHEKWKTEEVVRLKCQGPPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVTYEV 1920
            +V+ I EKWKT EVVRLK +G PALNMKRMHEILERKTGGLVIWRSGTS++LYRGV+YE 
Sbjct: 282  VVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYET 341

Query: 1919 P-QLVKKQYLSSGVNSLSKAVNNHIGDRVQQNKDVNVQYHLEDHVAPVEKEQNPGSFLEI 1743
            P + +KK+ +    + + +  +  +     QN   +V    ED V   E+ ++     E+
Sbjct: 342  PSERMKKRIMRR--DEIRQKNSPIVDGESNQNSRNDVDSLREDSVDTSEENKSIDRQSEV 399

Query: 1742 KYEDEVNKLLDGLGPRYTDWAGSDPLPVDADLLPAVVPGYTPPFRILPYGVRSNLGLKES 1563
             YEDEV+KLLDGLGPRYTDW GS PLPVDADLLP +VPGY PPFRILPYGVRS L  +E+
Sbjct: 400  NYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREA 459

Query: 1562 TXXXXXXXXLPPHFALGRSRQHEGLATAMVKLWESSSIAKIFLKRDVQLTTSERMAEDIR 1383
            T        LPPHFALGRSRQH+GLA+ MVKLW+ SSIAKI +KR VQLTTSERMAEDI+
Sbjct: 460  TALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIK 519

Query: 1382 KLTGGTLLSRNKDYLVFYRGKDFLSPXXXXXXXXXXXXXXXLQDEEEQXXXXXXXXXXXX 1203
            KLTGG LLSRNKD+LVFYRGKDFLSP               LQDEEE+            
Sbjct: 520  KLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLNLTAG 579

Query: 1202 XXXXEEVGIAGTLGETLEADARWGSKLGKDHADKMIKAAEVARHADLMRKLERKLFLAER 1023
                     AGTLGETL+ADARWG +L   H + +++ AE+ RH DL+RKLE+KL  AE+
Sbjct: 580  VTTINSSRTAGTLGETLDADARWGKRLDDKHKENVMREAELLRHGDLVRKLEKKLAFAEK 639

Query: 1022 KLMKAENALAKVEEFSKPAENATDPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVE 843
            KLMKAE  L+KVEE   P +   +P+S+TDEERFMFRKLGLRMKAFLLLGRRG+FDGTVE
Sbjct: 640  KLMKAERVLSKVEETLNPLDRHAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVE 699

Query: 842  NMHLHWKYRELVKIIVKAKTFAQVRNVALSLEAESGGVLVSVDKVSKGFAIIVFRGKDYK 663
            NMHLHWKYRELVKI+VKAK F QV  +AL+LEAESGG+LVSVDKVSKG+AIIVFRGKDY 
Sbjct: 700  NMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESGGILVSVDKVSKGYAIIVFRGKDYS 759

Query: 662  RPSSLRPKNLLTKRKALARSIELQRHEALNRHISNLHKRVNQLRSELDQMEDVKDRGDEN 483
            RP +LRPKNLLTKRKALARSIELQR EAL  HIS +  RV QL +E++Q+  +KD  D+ 
Sbjct: 760  RPPTLRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAEIEQLASLKDSADDE 819

Query: 482  LYAKLDSAYSXXXXXXXXXXXXXXXXTFDTAGDFGSDEEDAD 357
            LY KL+SAYS                 FD   D     +D+D
Sbjct: 820  LYDKLNSAYSSEDEDSEEEGDDAFIEVFDNDNDVVHRSDDSD 861