BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00011618
         (1284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indi...   317   5e-84
tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family...   311   4e-82
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub...   303   8e-80
gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza...   303   8e-80
ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub...   303   1e-79
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz...   300   1e-78
gb|ACN85238.1| putative RNA polymerase A(I) large subunit [Oryza...   298   2e-78
ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [S...   296   2e-77
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza...   294   5e-77
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   253   9e-65
ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I sub...   240   1e-60
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   239   2e-60
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   238   5e-60
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   237   7e-60
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   234   4e-59
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              234   4e-59
ref|XP_002308049.1| predicted protein [Populus trichocarpa]           234   4e-59
gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triti...   234   6e-59
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   232   3e-58
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...   231   4e-58

>gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indica Group]
          Length = 1350

 Score =  317 bits (813), Expect = 5e-84
 Identities = 172/339 (50%), Positives = 222/339 (65%), Gaps = 4/339 (1%)
 Frame = -3

Query: 1009 KMTDARFDEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGP 830
            +M D R DEAASE V S+ F FY ++E++++SVK+I+K D  DAKN PV GGL DPA+GP
Sbjct: 93   RMADVRPDEAASEEVNSIHFSFYNDDEIKRISVKQITKSDRVDAKNCPVPGGLLDPAMGP 152

Query: 829  LKEIDSCRSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKV 650
              + D+C+SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLLQVTCFHCH FR+ KE+V
Sbjct: 153  TNDTDTCKSCGQQSIRCPGHFGHIELAKPLFNPLLFMSLKNLLQVTCFHCHKFRLNKEQV 212

Query: 649  SLYAFKLESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFT 470
              Y  +LE +++GDI  AK L+     + LS+E        E T    S+  +   +T+T
Sbjct: 213  DRYTNELELLVRGDIAHAKNLEDLG-GKVLSKEDD----ETEATSGDKSARSERENKTWT 267

Query: 469  SLQYSEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLG 290
            S+Q  EA+S+ +K M+++ KKCA+C +KNP I +P +GWL KD   S VRAN I  +N  
Sbjct: 268  SIQLKEALSIFSKLMKKRQKKCAHCEKKNPIIKNPIYGWLIKDTTSSSVRANAI--ANAK 325

Query: 289  LSSAGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPA----KSTKKTKRFQGLPPEI 122
            LS  G            HV D  S E   S  DEEL+ P     +ST +T+R       I
Sbjct: 326  LSGDG------------HVND--SRETGVSGLDEELTSPGTLSRRSTNETRRIS--DDTI 369

Query: 121  IEQVSSSGKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
             E V+SSGKKHLL +EVE ILKDLWK EA+FCML+CD Q
Sbjct: 370  KEMVASSGKKHLLTTEVESILKDLWKKEARFCMLLCDFQ 408


>tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 548

 Score =  311 bits (797), Expect = 4e-82
 Identities = 166/336 (49%), Positives = 221/336 (65%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1006 MTDARFDEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPL 827
            M D +  +AASE V S+ F FY+++E++++S+KKI+K +  DAKN PV GGL DPA+GP+
Sbjct: 1    MADGQHIQAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPI 60

Query: 826  KEIDSCRSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVS 647
             +ID C+SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLL VTCFHCH FR+ KE+V 
Sbjct: 61   NDIDICKSCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVD 120

Query: 646  LYAFKLESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTS 467
             Y  +LE ++KGDI  AK L+       LS+E      +   T +  +SS    ++T+TS
Sbjct: 121  RYVNELELLVKGDIVCAKNLEDSVEEAYLSKEDE----NMNKTTSGDNSSSVKDKKTWTS 176

Query: 466  LQYSEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLGL 287
            +Q  E +S+ +K M+++ KKCA C  K+PTI+SP FGWL KD + S VR N I  ++  L
Sbjct: 177  IQLKEVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVKDTKASAVRTNAI--ADFKL 234

Query: 286  SSAGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKT-KRFQGLPPEII-EQ 113
               GD  +SG              E   S  +EE S P   +K +    +GL  + I E 
Sbjct: 235  KGDGDIHNSG--------------ETGVSGLEEESSSPGMVSKDSINEVRGLSDDTIKEL 280

Query: 112  VSSSGKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
            V+SSGKKHLLP+EVE ILKDLWKNEA+FCML+CD Q
Sbjct: 281  VASSGKKHLLPTEVESILKDLWKNEARFCMLLCDFQ 316


>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
           brachyantha]
          Length = 1755

 Score =  303 bits (777), Expect = 8e-80
 Identities = 160/331 (48%), Positives = 213/331 (64%), Gaps = 4/331 (1%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           +AASE V+S+ F FY ++E++++SVK+I+KPD  DAKN PV GGL DPA+GP  + D+C+
Sbjct: 7   QAASEEVESIHFSFYNDDEIKRISVKQITKPDRLDAKNCPVPGGLLDPAMGPTSDTDTCK 66

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLL +TCFHCH FR+ +E+V  Y  +LE
Sbjct: 67  SCGQHSVRCPGHFGHIELAKPLFNPLLFLSLKNLLHMTCFHCHKFRLNREQVDRYTDELE 126

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQYSEAM 446
            ++KGDI  AK L+       L ++ +      E T    S+  ++  +T+TS+Q  E +
Sbjct: 127 LLVKGDIAHAKNLEDSGGKVLLEEDDK-----TEATSGDKSTCSESENKTWTSIQLKEVL 181

Query: 445 SLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLGLSSAGDTP 266
           S+   FM+++ KKC +C +KNP I+ P +GWL KD   S VRAN I  + L    +GD  
Sbjct: 182 SIFANFMKKRQKKCTHCNKKNPKISHPIYGWLIKDADISAVRANAIADAKL----SGD-- 235

Query: 265 HSGIYKEEKHVEDEKSTEDAASLTDEELSVPAK----STKKTKRFQGLPPEIIEQVSSSG 98
                     V    S E   S  DEEL+ P      ST +T+R       I E V+SSG
Sbjct: 236 ----------VRFHDSRETGVSGLDEELTSPGTSSRGSTNETRRIS--DDTIKEMVASSG 283

Query: 97  KKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
           KKHLL +EVE ILKDLWKNEA+FCML+CD Q
Sbjct: 284 KKHLLATEVESILKDLWKNEARFCMLLCDFQ 314


>gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza brachyantha]
          Length = 1138

 Score =  303 bits (777), Expect = 8e-80
 Identities = 160/331 (48%), Positives = 213/331 (64%), Gaps = 4/331 (1%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           +AASE V+S+ F FY ++E++++SVK+I+KPD  DAKN PV GGL DPA+GP  + D+C+
Sbjct: 7   QAASEEVESIHFSFYNDDEIKRISVKQITKPDRLDAKNCPVPGGLLDPAMGPTSDTDTCK 66

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLL +TCFHCH FR+ +E+V  Y  +LE
Sbjct: 67  SCGQHSVRCPGHFGHIELAKPLFNPLLFLSLKNLLHMTCFHCHKFRLNREQVDRYTDELE 126

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQYSEAM 446
            ++KGDI  AK L+       L ++ +      E T    S+  ++  +T+TS+Q  E +
Sbjct: 127 LLVKGDIAHAKNLEDSGGKVLLEEDDK-----TEATSGDKSTCSESENKTWTSIQLKEVL 181

Query: 445 SLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLGLSSAGDTP 266
           S+   FM+++ KKC +C +KNP I+ P +GWL KD   S VRAN I  + L    +GD  
Sbjct: 182 SIFANFMKKRQKKCTHCNKKNPKISHPIYGWLIKDADISAVRANAIADAKL----SGD-- 235

Query: 265 HSGIYKEEKHVEDEKSTEDAASLTDEELSVPAK----STKKTKRFQGLPPEIIEQVSSSG 98
                     V    S E   S  DEEL+ P      ST +T+R       I E V+SSG
Sbjct: 236 ----------VRFHDSRETGVSGLDEELTSPGTSSRGSTNETRRIS--DDTIKEMVASSG 283

Query: 97  KKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
           KKHLL +EVE ILKDLWKNEA+FCML+CD Q
Sbjct: 284 KKHLLATEVESILKDLWKNEARFCMLLCDFQ 314


>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
           italica]
          Length = 1682

 Score =  303 bits (775), Expect = 1e-79
 Identities = 160/332 (48%), Positives = 212/332 (63%), Gaps = 4/332 (1%)
 Frame = -3

Query: 988 DEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSC 809
           ++AASE V S+ F FY ++E+++ SVKKI+K +  DAKN PV GGL DPA+GP+ + D+C
Sbjct: 25  EQAASEEVDSIHFSFYGDDEIKRSSVKKITKSERLDAKNLPVPGGLLDPAMGPINDTDTC 84

Query: 808 RSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKL 629
           +SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLL VTCFHCH FR+ KE+V  Y  +L
Sbjct: 85  KSCGQHSVRCPGHFGHIELAKPLFNPLLFTSLKNLLHVTCFHCHKFRLNKEQVDRYVNEL 144

Query: 628 ESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQYSEA 449
           E ++KGD+ RAK L+      S S+E       A   D P   S +  ++T+TS+Q  E 
Sbjct: 145 ELLVKGDVARAKNLEDSGKRASPSEEDE-DITEATSCDKP---SPEKDKKTWTSVQLKEV 200

Query: 448 MSLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNL----GLSS 281
           +S+ +K M+++ KKCA C  K+PT +SP FGWL KD   S VRAN I    L    G  S
Sbjct: 201 LSIFSKIMKKRQKKCAKCDMKSPTFSSPIFGWLVKDTSASAVRANAIADFKLKGDGGAHS 260

Query: 280 AGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVSSS 101
           +G+T  SG  +E    + + S  +   L+D+ +                     E V+SS
Sbjct: 261 SGETGVSGFDEERTSPQSKGSINEVRHLSDDTIK--------------------EFVASS 300

Query: 100 GKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
           GKKHLLP+EVE ILK LWKNEA+FCML+CD Q
Sbjct: 301 GKKHLLPTEVESILKGLWKNEARFCMLLCDFQ 332


>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
           Group]
          Length = 1748

 Score =  300 bits (767), Expect = 1e-78
 Identities = 166/339 (48%), Positives = 217/339 (64%), Gaps = 12/339 (3%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           +AASE V S+ F FY ++E++++SVK+I+K D  DAKN PV GGL DPA+GP  + D+C+
Sbjct: 7   QAASEEVNSIHFSFYNDDEIKRISVKQITKSDRVDAKNCPVPGGLLDPAMGPTNDTDTCK 66

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYA---- 638
           SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLLQVTCFHCH FR+ KE+ S +     
Sbjct: 67  SCGQQSIRCPGHFGHIELAKPLFNPLLFMSLKNLLQVTCFHCHKFRLNKEQHSRFCRITK 126

Query: 637 ----FKLESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFT 470
                +LE +++GDI  AK L+     + LS+E        E T    S+  +   +T+T
Sbjct: 127 IFDFLELELLVRGDIAHAKNLEDLG-GKVLSKEDD----ETEATSGDKSARSERENKTWT 181

Query: 469 SLQYSEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLG 290
           S+Q  EA+S+ +K M+++ KKCA+C +KNP I +P +GWL KD   S VRAN I  +N  
Sbjct: 182 SIQLKEALSIFSKLMKKRQKKCAHCEKKNPIIKNPIYGWLIKDTTSSSVRANAI--ANAK 239

Query: 289 LSSAGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPA----KSTKKTKRFQGLPPEI 122
           LS  G            HV D  S E   S  DEEL+ P     +ST +T+R       I
Sbjct: 240 LSGDG------------HVND--SRETGVSGLDEELTSPGTLSRRSTNETRRIS--DDTI 283

Query: 121 IEQVSSSGKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
            E V+SSGKKHLL +EVE ILKDLWK EA+FCML+CD Q
Sbjct: 284 KEMVASSGKKHLLTTEVESILKDLWKKEARFCMLLCDFQ 322


>gb|ACN85238.1| putative RNA polymerase A(I) large subunit [Oryza minuta]
          Length = 563

 Score =  298 bits (764), Expect = 2e-78
 Identities = 167/339 (49%), Positives = 215/339 (63%), Gaps = 12/339 (3%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           +AASE V S+ F FY ++E++++SVK+I+K D  DAKN PV GGL DPA+GP    D+C+
Sbjct: 7   QAASEEVNSIHFSFYYDDEIKRISVKQITKSDCVDAKNCPVPGGLLDPAMGPTSVTDTCK 66

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSL------ 644
           SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLL VTCFHCH FR+ +E+ SL      
Sbjct: 67  SCGQQSIRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNREQFSLSWSIQV 126

Query: 643 --YAFKLESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFT 470
             Y  +LE +++GDI  AK L+     + LS+E        E T    S+  +   +T+T
Sbjct: 127 DRYTNELELLVRGDIAHAKNLEDLG-GKVLSEEDD----ETEATSGDKSARSERENKTWT 181

Query: 469 SLQYSEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLG 290
           S+Q  EA+S+  K M++K KKCA+C +KNP I+ P +GWL KD   S VRAN I  +N  
Sbjct: 182 SIQLKEALSIFAKLMKKKQKKCAHCEKKNPIISHPIYGWLIKDTTSSSVRANAI--ANAK 239

Query: 289 LSSAGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPA----KSTKKTKRFQGLPPEI 122
           LS  G            HV D  S E   S  DEEL+ P     +ST +T+R       I
Sbjct: 240 LSGDG------------HVHD--SRETGVSGLDEELTSPGTSSRRSTNETRRIS--DDTI 283

Query: 121 IEQVSSSGKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
            E V+SSGKKHLL +EVE ILKDLWK EA+FCML+CD Q
Sbjct: 284 KEMVASSGKKHLLTTEVESILKDLWKKEARFCMLLCDFQ 322


>ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [Sorghum bicolor]
           gi|241945458|gb|EES18603.1| hypothetical protein
           SORBIDRAFT_09g027223 [Sorghum bicolor]
          Length = 799

 Score =  296 bits (757), Expect = 2e-77
 Identities = 160/329 (48%), Positives = 213/329 (64%), Gaps = 2/329 (0%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           +AASE V S+ F FY+++E++++S+KKI+K +  DAKN PV GGL DPA+GP+ + D+C+
Sbjct: 8   QAASEEVDSLHFSFYSDDEIKRISIKKITKLERLDAKNLPVPGGLLDPAMGPINDTDTCK 67

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           SCGQ S RCPGH GHI+LAKPL++PLLF SL+NLL VTCF+CH FR+ KE+V  Y  +LE
Sbjct: 68  SCGQNSVRCPGHFGHIELAKPLFNPLLFMSLRNLLHVTCFYCHKFRLNKEQVDRYVNELE 127

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQYSEAM 446
            ++KGDI  AK L+       LS+E        E T    SSS K   +T+TS+Q  E +
Sbjct: 128 LLVKGDIVGAKNLEDSVKEAYLSEED---ENITETTSGDKSSSVKD-NKTWTSVQLKEVL 183

Query: 445 SLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLGLSSAGDTP 266
           S+ +K M+++  KCA C  K+PTI+SP FGWL KD   S VRAN I  ++  L   GD  
Sbjct: 184 SIFSKIMKKRQTKCAKCDMKSPTISSPIFGWLVKDTSASAVRANAI--ADFKLKGDGDAH 241

Query: 265 HSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTK-KTKRFQGLPPEII-EQVSSSGKK 92
           +SG              +   S  DEE + P   +K      + L  + + E V+SSGKK
Sbjct: 242 NSG--------------DTGVSGLDEETTSPGMVSKGSINEVRRLSDDAVKEMVASSGKK 287

Query: 91  HLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
           HLLP+EVE ILKDLW NEA+FCML+CD Q
Sbjct: 288 HLLPTEVESILKDLWNNEARFCMLLCDFQ 316


>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
          Length = 1830

 Score =  294 bits (753), Expect = 5e-77
 Identities = 159/331 (48%), Positives = 213/331 (64%), Gaps = 4/331 (1%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           +AASE V S+ F FY ++E+R++SVK+I+K D  DAKN PV GGL DPA+GP  + D+C+
Sbjct: 7   QAASEEVDSIHFSFYNDDEIRRISVKQITKADRLDAKNCPVPGGLLDPAMGPTNDTDTCK 66

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           SCGQ S RCPGH GHI+LAKPL++PLLF SLKNLL VTCFHCH FR+ + +V  Y  +LE
Sbjct: 67  SCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNRGQVDRYTNELE 126

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQYSEAM 446
            +++GDI  AK L+       L+++        E T     +  +   +T+TS+Q  EA+
Sbjct: 127 LLVRGDIALAKNLEDSGGKVFLAEDD-----ETEATSGDKLACSEGENKTWTSIQLKEAL 181

Query: 445 SLLNKFMREKLKKCANCGRKNPTITSPTFGWLSKDIRGSDVRANIIRGSNLGLSSAGDTP 266
           S+  K ++++ KKC +C +KNP I+ P +GWL KD   S VRAN+I  + L    +GD+ 
Sbjct: 182 SIFAKLLKKRQKKCVHCDKKNPKISHPVYGWLIKDTT-SSVRANVIADAKL----SGDS- 235

Query: 265 HSGIYKEEKHVEDEKSTEDAASLTDEELSVPAK----STKKTKRFQGLPPEIIEQVSSSG 98
                     V D  S E A S  DEEL+ P      ST +T+R       I E V+SSG
Sbjct: 236 ---------RVHD--SRETAVSGLDEELTSPGTSSRGSTNETRRIS--DDTIKEMVASSG 282

Query: 97  KKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
           KKHLL +EVE ILK+LWKNEA+FCML+CD Q
Sbjct: 283 KKHLLTTEVESILKNLWKNEARFCMLLCDFQ 313


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score =  253 bits (647), Expect = 9e-65
 Identities = 144/331 (43%), Positives = 194/331 (58%), Gaps = 4/331 (1%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           + A+E++ S+ F F T+EEVRK S  KI+ P L D    PV GGLYDPALGPL E   C+
Sbjct: 9   KGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICK 68

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           +CGQ S  CPGHCGHIDL  P+Y+PLLF  L  LLQ TCF C +FR+++ +V     +LE
Sbjct: 69  TCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLE 128

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEK---RLRRCSAEYTDAPFSSSKKAVQQTFTSLQYS 455
            I+KGDI  AK+L+S S +E+L  E+       C   ++    +  +   QQ +TSLQ++
Sbjct: 129 LIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFT 188

Query: 454 EAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWL-SKDIRGSDVRANIIRGSNLGLSSA 278
           EAMS+LN F++ K KKC NC   NP IT PTFGW  +  +  + +RAN+I G  LG    
Sbjct: 189 EAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLG---- 244

Query: 277 GDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVSSSG 98
                 G+   E  +E     EDAA   D+        TKK K+ +        +  S+ 
Sbjct: 245 ------GLLGSE--IEGTTDVEDAAEPGDQH-----SGTKKHKKKERKEVLEFTRQKSTF 291

Query: 97  KKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
            K LLPSEV+  L+ LWKNEA+ C  + D+Q
Sbjct: 292 SKQLLPSEVKEKLELLWKNEARICSFISDLQ 322


>ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
            [Brachypodium distachyon]
          Length = 1868

 Score =  240 bits (612), Expect = 1e-60
 Identities = 136/333 (40%), Positives = 200/333 (60%), Gaps = 6/333 (1%)
 Frame = -3

Query: 985  EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
            +A S  V+S+LF FY+EEE++++SV +I+K D  DAKN PV GGL D A+GP+   D+C 
Sbjct: 234  QAPSVEVESILFGFYSEEEIKRVSVTRITKADRLDAKNCPVPGGLLDLAMGPINATDTCN 293

Query: 805  SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVS---LYAF 635
            +CGQLS  CPGH GHI+L+KPL++PLLF +L++LL+ TCF CH FR+  E+VS    Y  
Sbjct: 294  TCGQLSGLCPGHFGHIELSKPLFNPLLFGTLRDLLRSTCFSCHRFRLHSEQVSPVRRYTR 353

Query: 634  KLESIIKGDIKRAKKL-DSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQY 458
            +LE + +GD+ RAK L DS    E +  +        E +    SS      +T+TS+Q 
Sbjct: 354  ELELVARGDVARAKNLQDSGVAEEDVEMD--------EDSSVDQSSPSDRENKTWTSIQL 405

Query: 457  SEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLS-KDIRGSDVRANIIRGSNL-GLS 284
             EA +++ K +++++KKCANC  ++P +T   FGWL  +D +GS VR   I   NL G S
Sbjct: 406  KEAHAIIFKLLKKQVKKCANCDMRSPKVTCQIFGWLKIQDTKGSSVRRKAITDFNLEGDS 465

Query: 283  SAGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVSS 104
               D+  +G+                + L+D+ +         + +  GL  + I+++  
Sbjct: 466  HRHDSSENGV----------------SGLSDDIIK------GSSNQITGLSDDRIKEIP- 502

Query: 103  SGKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
                 LL +EVE ILKDLW+NEA+FCML+CD Q
Sbjct: 503  -----LLATEVESILKDLWENEARFCMLLCDFQ 530


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
           sativus]
          Length = 1650

 Score =  239 bits (609), Expect = 2e-60
 Identities = 144/332 (43%), Positives = 185/332 (55%), Gaps = 2/332 (0%)
 Frame = -3

Query: 997 ARFDEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEI 818
           A+  E ASE+VK V F F T EEVRK SV K++ P L D    PV GGLYDPA+G L E 
Sbjct: 2   AQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDET 61

Query: 817 DSCRSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYA 638
             C+SCGQ    CPGHCGHIDL  P+Y+PLLF  L N L+ TCF CH+FR  +  V    
Sbjct: 62  TLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCK 121

Query: 637 FKLESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQY 458
             LE I+ G+I +AK+L+     E ++ + R +   + YT       K    +T+TSLQ+
Sbjct: 122 TLLELILDGEIAKAKELE----EEWMNSKSRTKSSHSMYT----YERKNGQPETWTSLQF 173

Query: 457 SEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWL-SKDIRGSDVRANIIRGSNLGLSS 281
           SEA+S++ KF++ K   C  CG K+P IT PTFGW   K + G   RAN IR S     S
Sbjct: 174 SEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVS 233

Query: 280 AGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVS-S 104
           +G     G+   E+    E + ED                     F+ + PE+  Q + S
Sbjct: 234 SG---AEGVSSLEEETTTEATVED---------------------FEDVSPEVFMQKNFS 269

Query: 103 SGKKHLLPSEVELILKDLWKNEAQFCMLMCDI 8
           SG  HLLPSEV+ ILK LWKNEA  C  + DI
Sbjct: 270 SG--HLLPSEVKDILKRLWKNEALLCSFISDI 299


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1650

 Score =  238 bits (606), Expect = 5e-60
 Identities = 136/330 (41%), Positives = 198/330 (60%), Gaps = 3/330 (0%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           E A+ +VK+V F F T+EE+ K S  KI+ P L D  ++PV GGLYDPALGP  E   C+
Sbjct: 6   EGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHEKSPCQ 65

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           SCGQ S  CPGH GHI+L  P+Y+PL+F  L N+L+ TCF CH+F+  + +V L A +LE
Sbjct: 66  SCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELRANQLE 125

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFS--SSKKAVQQTFTSLQYSE 452
            I+KG+I +AK LD+ + +E           SA+ +D   S  SS + + + +TSLQ+SE
Sbjct: 126 LIMKGNIAKAKNLDAINLDE-----------SADLSDGNDSQCSSDEQLGENWTSLQFSE 174

Query: 451 AMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLS-KDIRGSDVRANIIRGSNLGLSSAG 275
           AMS+L KF++++ +KC NCG  NP IT PTFGW   K +  +  RAN+I G +  L+S  
Sbjct: 175 AMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDASLAS-- 232

Query: 274 DTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVSSSGK 95
                      + + D+ S  +  +   E+++    +    KR   L      ++S S  
Sbjct: 233 -----------EIIHDDISLGNGDTTDVEDITSGDTANSNAKRQNKLARH--NKLSGS-- 277

Query: 94  KHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
             LLPS+V+ IL+ LW+NEA+ C+ + DIQ
Sbjct: 278 --LLPSQVQGILELLWENEARLCLYISDIQ 305


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  237 bits (605), Expect = 7e-60
 Identities = 143/330 (43%), Positives = 183/330 (55%), Gaps = 2/330 (0%)
 Frame = -3

Query: 991 FDEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDS 812
           F   ASE+VK V F F T EEVRK SV K++ P L D    PV GGLYDPA+G L E   
Sbjct: 10  FPMGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTL 69

Query: 811 CRSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFK 632
           C+SCGQ    CPGHCGHIDL  P+Y+PLLF  L N L+ TCF CH+FR  +  V      
Sbjct: 70  CKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTL 129

Query: 631 LESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQYSE 452
           LE I+ G+I +AK+L+     E ++ + R +   + YT       K    +T+TSLQ+SE
Sbjct: 130 LELILDGEIAKAKELE----EEWMNSKSRTKSSHSMYT----YERKNGQPETWTSLQFSE 181

Query: 451 AMSLLNKFMREKLKKCANCGRKNPTITSPTFGWL-SKDIRGSDVRANIIRGSNLGLSSAG 275
           A+S++ KF++ K   C  CG K+P IT PTFGW   K + G   RAN IR S     S+G
Sbjct: 182 AISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSG 241

Query: 274 DTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVS-SSG 98
                G+   E+    E + ED                     F+ + PE+  Q + SSG
Sbjct: 242 ---AEGVSSLEEETTTEATVED---------------------FEDVSPEVFMQKNFSSG 277

Query: 97  KKHLLPSEVELILKDLWKNEAQFCMLMCDI 8
             HLLPSEV+ ILK LWKNEA  C  + DI
Sbjct: 278 --HLLPSEVKDILKRLWKNEALLCSFISDI 305


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1660

 Score =  234 bits (598), Expect = 4e-59
 Identities = 135/329 (41%), Positives = 195/329 (59%), Gaps = 2/329 (0%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           E A+ +VK+V F F T+EE+ K S  KI+ P L D  ++PV GGLYDPALGP  E   C+
Sbjct: 6   EGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHEKSPCQ 65

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           SCGQ S  CPGH GHI+L  P Y+PL+F  L N+L+ TCF CH+F+  +++V L A +LE
Sbjct: 66  SCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELRANQLE 125

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQYSEAM 446
            I+KG+I +AK LD  + +ES         C  + +     SS + + + +TSLQ+SEAM
Sbjct: 126 LIMKGNIAKAKNLDEINLDESAD------LCDGDDSQC---SSAEQLGENWTSLQFSEAM 176

Query: 445 SLLNKFMREKLKKCANCGRKNPTITSPTFGWLS-KDIRGSDVRANIIRGSNLGLSSAGDT 269
           S+L KF++++ +KC NCG  NP IT PTFGW   K +  +  RAN+I G+++ L+S  + 
Sbjct: 177 SVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSLAS--EI 234

Query: 268 PHSGIYKEEKHVEDEKSTEDAASLTDEEL-SVPAKSTKKTKRFQGLPPEIIEQVSSSGKK 92
            H  I            T D   +T  ++ +  AK   K K+            S +   
Sbjct: 235 IHDDISL------GNGDTTDVEDITSGDIANSNAKRHNKEKQIS----------SHTLAG 278

Query: 91  HLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
            LLPS+V+ IL+ LW+N+A+ C+ + DIQ
Sbjct: 279 SLLPSQVQRILELLWENDARLCLYISDIQ 307


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  234 bits (598), Expect = 4e-59
 Identities = 144/333 (43%), Positives = 191/333 (57%), Gaps = 7/333 (2%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           E  +E V++V F F+T+EEVRK S KKI+ P + D+   PV GGLYDPALG + E   C+
Sbjct: 6   EGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQ 65

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           SCGQ S  CPGHCGHIDL   +Y+PLLF  L NLLQ TCF CH+F+     V  Y  +LE
Sbjct: 66  SCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLE 125

Query: 625 SIIKGDIKRAKKLDSQSCNESL----SQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSLQY 458
            I KGD+  AK LDS S +ES     S    +   S   + A  + S    QQ +TSLQ 
Sbjct: 126 LISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQC 185

Query: 457 SEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWL-SKDIRGSDVRANIIRGSNLGLSS 281
            EAMS+++ F++ K + C NC  K+P +T PTFGW     +  +  RAN+IRGS L    
Sbjct: 186 IEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKL---- 241

Query: 280 AGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPP-EIIEQVS- 107
             + P +G+  +E H         + + TD    +    TK+ +R     P E I+Q S 
Sbjct: 242 --ERPLNGVDTDETH--------SSIAPTD---GIQDTVTKRLERKGAQAPIEFIKQKSF 288

Query: 106 SSGKKHLLPSEVELILKDLWKNEAQFCMLMCDI 8
            SG   LLPSEV  I++ LW+NEA+ C  + DI
Sbjct: 289 FSGP--LLPSEVRDIMERLWENEAELCSFISDI 319


>ref|XP_002308049.1| predicted protein [Populus trichocarpa]
          Length = 1168

 Score =  234 bits (598), Expect = 4e-59
 Identities = 141/332 (42%), Positives = 188/332 (56%), Gaps = 5/332 (1%)
 Frame = -3

Query: 985 EAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDSCR 806
           E A+ +V SV F F T+EEV K S  KI+   L D  + PV GGLYDPA+GPL + + C+
Sbjct: 5   EGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGD-EPCK 63

Query: 805 SCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFKLE 626
           +CGQ S  C GHCGHIDL  P+Y+PLLF  L  LLQ TCF C +FR    +V  +  +LE
Sbjct: 64  TCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLE 123

Query: 625 SIIKGDIKRAKKLDSQSCNESLSQEK---RLRRCSAEYTDAPFSSSKKAVQQTFTSLQYS 455
            IIKGD+  AK+LDS S  E+   E        CS  ++ A   +++++ Q  +TSLQ S
Sbjct: 124 LIIKGDVVGAKRLDSFSPIEASLPEDSDGSSESCSTIHSGARHPNNEQSKQSEWTSLQLS 183

Query: 454 EAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLS-KDIRGSDVRANIIRGSNLGLSSA 278
           EAMS+LN F++ + KKC NC   NP I  PTFGW     +  + +R+N+I+   +     
Sbjct: 184 EAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTI----- 238

Query: 277 GDTPHSGIYKEEKHVED-EKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVSSS 101
            + P  G ++E    ED  KS  +  S T+  L          K  Q L  +   Q  + 
Sbjct: 239 -EGPFGGAFEELIDAEDATKSPSNKESATNRNL----------KEHQKLQHQFTSQKDAL 287

Query: 100 GKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
             + LLPSE   ILK LWKNEA+ C LM DIQ
Sbjct: 288 SSQ-LLPSEAMDILKLLWKNEARLCSLMSDIQ 318


>gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triticum urartu]
          Length = 1915

 Score =  234 bits (597), Expect = 6e-59
 Identities = 132/334 (39%), Positives = 192/334 (57%), Gaps = 2/334 (0%)
 Frame = -3

Query: 1000 DARFDEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKE 821
            D   ++A S  V S+LF FYT++EVR+LSVK++++ +  DAK  PV GGL DPA+GP+  
Sbjct: 247  DVEQEQATSVEVDSILFGFYTDDEVRRLSVKRLTRSERLDAKMCPVPGGLLDPAMGPVNA 306

Query: 820  IDSCRSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLY 641
             D+C++C Q    CPGH GHI+L+KPL++PLLF +L++LL+ TCF C  FR+  + V  Y
Sbjct: 307  NDTCKTCAQQPGNCPGHFGHIELSKPLFNPLLFDTLRDLLRSTCFTCRKFRLSAQLVDRY 366

Query: 640  AFKLESIIKGDIKRAKKL-DSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTSL 464
            A +LE + +GD+ +AK L DS    ES+  ++          D P S S +   + +TS+
Sbjct: 367  ARELELLARGDVVQAKNLQDSAVSEESVEMDE------DGSVDKPASPSDRG-NKIWTSI 419

Query: 463  QYSEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLS-KDIRGSDVRANIIRGSNLGL 287
            Q  EA S+ +K M++++ KCANCG KNP I    +GWL+ +   GS VR   I   NL  
Sbjct: 420  QLKEAHSIFSKLMKKRVNKCANCGMKNPPIKCQIYGWLTIQGTDGSAVRRKAITDYNL-- 477

Query: 286  SSAGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVS 107
                        + + H+ +   T   + LTD+ +   +  TK                 
Sbjct: 478  ------------EGDGHISNPNGT-GVSGLTDDRVKASSNQTK----------------D 508

Query: 106  SSGKKHLLPSEVELILKDLWKNEAQFCMLMCDIQ 5
             S  + LL +EVE ILKDLW+ EA+FCML+CD Q
Sbjct: 509  LSDDRPLLATEVESILKDLWEKEARFCMLLCDFQ 542


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
           lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
           ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  232 bits (591), Expect = 3e-58
 Identities = 133/330 (40%), Positives = 186/330 (56%), Gaps = 2/330 (0%)
 Frame = -3

Query: 991 FDEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPLKEIDS 812
           F   AS+ V+SV F F TE++VRK S  K++ P L D    P  GGLYDP LGP+++  +
Sbjct: 19  FPMGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVGEPYPGGLYDPKLGPIEDKKA 78

Query: 811 CRSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVSLYAFK 632
           C +CGQL+  CPGHCGHI+L  P+YHPLLF  L N LQ TCF CH+F  K   V     +
Sbjct: 79  CDTCGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFICHHFMAKPYDVERAVSQ 138

Query: 631 LESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQ-QTFTSLQYS 455
           L+ IIKGDI  AK+L+S +  +S S +      S   TD+        ++ Q +TSLQ++
Sbjct: 139 LKLIIKGDIVSAKQLESNTPTKSDSSDVSCE--SGVTTDSSEGCEDSDMEDQRWTSLQFA 196

Query: 454 EAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWL-SKDIRGSDVRANIIRGSNLGLSSA 278
           E  +++  FMR   K C  C   NP +  P FGW+  K ++GSD+ AN+IRG  L  S++
Sbjct: 197 EVTAVMKNFMRLSSKSCNRCKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLKLKKSTS 256

Query: 277 GDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQVSSSG 98
                     E     D+   +  + + D +     KST+  K F        E+ ++S 
Sbjct: 257 S--------VENPDDFDDSGIDALSEVEDGDKETREKSTEVVKEF--------EEHNNSS 300

Query: 97  KKHLLPSEVELILKDLWKNEAQFCMLMCDI 8
           K+ LLP+EV  ILKDLW+NE  FC  + D+
Sbjct: 301 KRDLLPTEVREILKDLWENEHDFCSFIGDL 330


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score =  231 bits (590), Expect = 4e-58
 Identities = 131/334 (39%), Positives = 183/334 (54%), Gaps = 1/334 (0%)
 Frame = -3

Query: 1006 MTDARFDEAASEAVKSVLFRFYTEEEVRKLSVKKISKPDLYDAKNAPVLGGLYDPALGPL 827
            M  A+  E AS+ V+SV F F TEE+VRK SV K++ P L D    PV GGLYDP +GPL
Sbjct: 1    MAQAQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPL 60

Query: 826  KEIDSCRSCGQLSARCPGHCGHIDLAKPLYHPLLFQSLKNLLQVTCFHCHNFRIKKEKVS 647
             +  SC+SCGQLS  CPGHCGHI+L  P+YHPLLF  L N LQ TCF CH+F   K  V 
Sbjct: 61   DDRTSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVE 120

Query: 646  LYAFKLESIIKGDIKRAKKLDSQSCNESLSQEKRLRRCSAEYTDAPFSSSKKAVQQTFTS 467
                +L+ I+KG++  AK+LDS++ + S         C     +          +Q +TS
Sbjct: 121  RCVSQLKLIMKGNLVAAKQLDSRATDSS-------EECEDSEMEKERCEDSDMGKQRWTS 173

Query: 466  LQYSEAMSLLNKFMREKLKKCANCGRKNPTITSPTFGWLS-KDIRGSDVRANIIRGSNLG 290
            LQ++E   L+N F+R K K C +C  K P +  P FGW+    +  S + AN+IRG    
Sbjct: 174  LQFAEVTDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIK-- 231

Query: 289  LSSAGDTPHSGIYKEEKHVEDEKSTEDAASLTDEELSVPAKSTKKTKRFQGLPPEIIEQV 110
                       + K    VE+   ++D+     + LS     ++K KR      E   + 
Sbjct: 232  -----------VKKSASSVENPNDSDDSGI---DALSEVEDGSEKKKRKSSEVAEEFAKH 277

Query: 109  SSSGKKHLLPSEVELILKDLWKNEAQFCMLMCDI 8
             ++ ++ L PSEV+ ILK LW+NE +FC  + D+
Sbjct: 278  QNNTRRDLFPSEVKKILKGLWENEHEFCSFIGDL 311