BLASTX nr result
ID: Stemona21_contig00011338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00011338
(4048 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 622 0.0
gb|ABA93957.1| NLI interacting factor-like phosphatase family pr... 629 0.0
gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japo... 629 0.0
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l... 654 0.0
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 625 0.0
gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indi... 627 0.0
ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [S... 616 0.0
ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal doma... 616 0.0
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric... 622 0.0
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 637 0.0
ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal doma... 614 0.0
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 635 0.0
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu... 637 0.0
emb|CBI35661.3| unnamed protein product [Vitis vinifera] 637 0.0
gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Ze... 608 0.0
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ... 631 0.0
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l... 602 0.0
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma... 616 0.0
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma... 608 0.0
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 607 0.0
>ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Oryza brachyantha]
Length = 1267
Score = 622 bits (1605), Expect(2) = 0.0
Identities = 333/503 (66%), Positives = 373/503 (74%), Gaps = 4/503 (0%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSEN--PVS-EQINTNGTLSLDSHNDKDNLKVHEH-G 2066
ND G IRMKPRDPRRILH+N+ QK++ PV EQ NGT DS KD+L HE
Sbjct: 771 NDAGVIRMKPRDPRRILHSNIAQKNDTVPPVGVEQAKINGTALPDSQGSKDHLLNHEQQA 830
Query: 2065 ELAQLTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINKVD 1886
E Q + LP P +AR+ T N N + S+SQL +T A + ++Q + +NK D
Sbjct: 831 EQLQTSALPSQPVTP-SARQVTMNANPV----SNSQLAAT-ALMPHGSTQQTSSSVNKAD 884
Query: 1885 MMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXX 1706
+ A + + A +PWGD+DHLL GYDDQQKA
Sbjct: 885 PRLTAGQNETNDDAVTSTGPLTAPDAVLPASPWGDVDHLLDGYDDQQKALIQKERARRIM 944
Query: 1705 XQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMG 1526
Q KMFAA+K LNSAKFAEV+ +H+EILRKKEE DRE+ RHLF HMG
Sbjct: 945 EQQKMFAAQKLCLVLDLDHTLLNSAKFAEVEPIHEEILRKKEEQDRERADRHLFCFHHMG 1004
Query: 1525 MWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXX 1346
MWTKLRPGIWNFLEKASKLYELHLYTMGNK+YATEMA+VLDPTG LFAGRVISR
Sbjct: 1005 MWTKLRPGIWNFLEKASKLYELHLYTMGNKIYATEMARVLDPTGTLFAGRVISRGDDGDT 1064
Query: 1345 XXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLG 1166
+RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK NLIVVERYTYFPCSRRQFGL G
Sbjct: 1065 LDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERYTYFPCSRRQFGLPG 1124
Query: 1165 PSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIV 986
PSLLEID DERPEDG+LASSLAVIERIHQNFF+H +LND DVR+ILA+EQ++ILGGC+IV
Sbjct: 1125 PSLLEIDRDERPEDGTLASSLAVIERIHQNFFTHPNLNDADVRSILASEQQRILGGCRIV 1184
Query: 985 FSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVV 806
FSRIFPVGEANP +HPLW TAEQFGAVCTNQID+ VTHVVANSLGTDKVNWALSTGRFVV
Sbjct: 1185 FSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLGTDKVNWALSTGRFVV 1244
Query: 805 QPGWVEASALLYRRANEHDFLVK 737
PGWVEASALLYRRA+E DF VK
Sbjct: 1245 HPGWVEASALLYRRASELDFAVK 1267
Score = 313 bits (802), Expect(2) = 0.0
Identities = 227/598 (37%), Positives = 329/598 (55%), Gaps = 34/598 (5%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMFSETR--VPVINALVQQA 3765
DFD++V I EKSFE C RLR SFENLKP+F ET +P+++ LVQQA
Sbjct: 186 DFDQRVGSILEELETISIEEAEKSFEGACTRLRTSFENLKPLFPETGSPMPMLDTLVQQA 245
Query: 3764 FMGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLD 3585
F+ I T+ +V +S EQ KN+ L+LL HIKN+Y +L P+Q +E+D+ VR LVF D
Sbjct: 246 FIAIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSYMLTPDQRNELDSRVRQLVFED 305
Query: 3584 KDQGLHAGNGGVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFNA----NLEPIRTPRIK 3417
+ N +++++A ++ G E+ SG N ++ + P
Sbjct: 306 GKDTANCPNATCGTNTSNVA-----ATSGQVLSERLPFESGAGNTFSGTSMLKVEIPSKN 360
Query: 3416 AEFSPLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTL 3237
SPLLDLHA YDE+SLPSPTR+++ P P+ +PIG T +P +E V ++
Sbjct: 361 RMISPLLDLHADYDENSLPSPTRDSTPPFPVPKPIGFGTFLMAPDRPSIMERVEPVKNSS 420
Query: 3236 HPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPSEESNE-GDK-NDLNGEVSSYSAT-- 3069
+P + D LKAVSSYQQKYGQ S F+ + LPSPTPS + ++ GDK D+ GEVSS+ A+
Sbjct: 421 YPSLNDALKAVSSYQQKYGQKSTFASDDLPSPTPSGDGDKSGDKGGDIFGEVSSFPASNK 480
Query: 3068 -----LNARPLNPPNSSQPGSNAMFAHSVSEHHKPSVNTAGSLGSLSKPVTKATAKSRDP 2904
+N P + P++ S++ FA + K N S S + KATAKSRDP
Sbjct: 481 IVLPVVNQMPPSRPSTVSSSSDS-FAGGPPGYAKQIENPV----SGSNHMLKATAKSRDP 535
Query: 2903 RLRLTSTEASGAPNSNRKLMPVESNAAKNGPL--GEIMNTRKNKASHELVLDEHSYKKQR 2730
RLR + +A ++NR+L E N +K+ + G +N+RK+K E ++DE+ K+ R
Sbjct: 536 RLRFLNRDAGVVADANRRLNFAEPNPSKDRTMGVGVPINSRKHKTVDEPLVDENMLKRSR 595
Query: 2729 NNNAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQ 2550
N PR++ GRGGW +DG V+ SD N N +L S + + +
Sbjct: 596 GGNGNPRDVLTPAGRGGWAKDGVNVSSYSSDGFQPNQNTRLGNSTTGSHNVRT-DSTLVS 654
Query: 2549 DVNSTTNAS--NSGLVQ----NSS-------AINAAALLKDLKDNTAVNPTML---IQLL 2418
+ N+ TN+S N+G+VQ NSS +++ A+LKD+ AVNPTML IQ+
Sbjct: 655 NTNNMTNSSGINTGVVQAPQTNSSPQTSSAPSVSLPAMLKDI----AVNPTMLMQWIQME 710
Query: 2417 QQSLAA-ETQQKILDPTHFASGSRLPGKVPTLNNASMKSSEVNQKPAGRPQSPAQPAS 2247
QQ ++A E QK+ S + G V L+ AS K++E P+ R Q P Q A+
Sbjct: 711 QQKMSATEPLQKVTASVGMTS-NETAGMVLPLSCAS-KTTEAAPVPSVRSQVPMQTAA 766
>gb|ABA93957.1| NLI interacting factor-like phosphatase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1272
Score = 629 bits (1622), Expect(2) = 0.0
Identities = 337/516 (65%), Positives = 385/516 (74%), Gaps = 5/516 (0%)
Frame = -1
Query: 2269 KVLLNQLPRNHLNDVGRIRMKPRDPRRILHNNMIQKSEN--PVS-EQINTNGTLSLDSHN 2099
+V + P + ND G IRMKPRDPRRILH+N++QK++ PV EQ +NGT DS +
Sbjct: 763 QVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTAPPDSQS 822
Query: 2098 DKDNLKVHEHGELAQLTGLPQPASLPDT--ARKFTNNLNNLPDIMSSSQLTSTSAPVLQS 1925
KD+L +++ + QL + P SLP T AR T N N + S+SQL +T+
Sbjct: 823 SKDHL-LNQDQKAEQLQAIALP-SLPVTSSARPVTMNANPV----SNSQLAATALMPPHG 876
Query: 1924 NSQLIPNKINKVDMMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQ 1745
N++ + +NK D A + + A+ + V A +P+GD+DHLL GYDDQQ
Sbjct: 877 NTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQQ 936
Query: 1744 KAAXXXXXXXXXXXQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDRE 1565
KA Q+KMFAARK LNSAKF EVD +H EILRKKEE DRE
Sbjct: 937 KALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQDRE 996
Query: 1564 KPQRHLFRLLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALF 1385
+ +RHLF HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK+YATEMAKVLDPTG LF
Sbjct: 997 RAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGTLF 1056
Query: 1384 AGRVISRXXXXXXXXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT 1205
AGRVISR +RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK NLIVVERYT
Sbjct: 1057 AGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERYT 1116
Query: 1204 YFPCSRRQFGLLGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILA 1025
YFPCSRRQFGL GPSLLEID DERPEDG+LASSLAVIERIH+NFFSH +LND DVR+ILA
Sbjct: 1117 YFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHKNFFSHPNLNDADVRSILA 1176
Query: 1024 AEQRKILGGCKIVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTD 845
+EQ++ILGGC+IVFSRIFPVGEANP +HPLW TAEQFGAVCTNQID+ VTHVVANSLGTD
Sbjct: 1177 SEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLGTD 1236
Query: 844 KVNWALSTGRFVVQPGWVEASALLYRRANEHDFLVK 737
KVNWALSTGRFVV PGWVEASALLYRRA+E DF VK
Sbjct: 1237 KVNWALSTGRFVVHPGWVEASALLYRRASELDFAVK 1272
Score = 304 bits (778), Expect(2) = 0.0
Identities = 222/593 (37%), Positives = 317/593 (53%), Gaps = 30/593 (5%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMFSETR--VPVINALVQQA 3765
DFD++V I EKSFE C RLR FENLKP+F E+ +P+++ALVQQA
Sbjct: 201 DFDQRVGSILEELEMVSIEEAEKSFEGACTRLRTCFENLKPLFPESGSPMPMLDALVQQA 260
Query: 3764 FMGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLD 3585
F+GI T+ +V +S EQ KN+ L+LL HIKN+Y +L P+Q E+D+ VR LVF D
Sbjct: 261 FVGIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFED 320
Query: 3584 KDQGLHAGNGGVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFNANLEPIRTPRIKAEFS 3405
+ N TN++A G E+ SG N+ + P S
Sbjct: 321 GKDNANGPNATSTNAAAP---------SGQVLSERLPFESGAGNS-FSKVEIPAKNRMVS 370
Query: 3404 PLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYV 3225
PLLDLHA YDE+SLPSPTR++ P + +PIG +P +E ++ +
Sbjct: 371 PLLDLHADYDENSLPSPTRDSKPPFDVPKPIGYGALPMAPDRPSVLERVEPAKNSSYQSF 430
Query: 3224 TDPLKAVSSYQQKYGQTSVFSCNQLPSPTPSEESNE-GDK-NDLNGEVSSYSAT------ 3069
D LKAV YQQK+GQ S F+ + LPSPTPS + ++ GDK D+ GEVSS+SA+
Sbjct: 431 NDALKAVCYYQQKHGQKSNFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALP 490
Query: 3068 -LNARPLNPPNSSQPGSNAMFAHSVSEHHKPSVNTAGSLGSLSKPVTKATAKSRDPRLRL 2892
+N P P S+ ++ FA + K N+ S S + KATAKSRDPRL+
Sbjct: 491 IVNQMPSRP--STVSSNSDSFAGGPPGYAKQIENSV----SGSNHLLKATAKSRDPRLKF 544
Query: 2891 TSTEASGAPNSNRKLMPVESNAAKNGPL--GEIMNTRKNKASHELVLDEHSYKKQRNNNA 2718
+ + G ++NR++ E N +K+ + G +N+RKNKA E ++DE++ K+ R
Sbjct: 545 LNRDTGGVADANRRVNFAEPNPSKDRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIG 604
Query: 2717 GPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNS 2538
R+M GRGGW +DG ++ SD N N +L + N I + ++N+
Sbjct: 605 NLRDMQPT-GRGGWAKDGGNISSYSSDGFQPNQNTRLGNNTTGNHNIRT-DSTLASNLNN 662
Query: 2537 TTNASNS--GLVQ-----------NSSAINAAALLKDLKDNTAVNPTMLIQLL----QQS 2409
TTN S + G+VQ ++ A++ A+LKD+ AVNPTML+Q + Q+
Sbjct: 663 TTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPAMLKDI----AVNPTMLMQWIQMEQQKM 718
Query: 2408 LAAETQQKILDPTHFASGSRLPGKVPTLNNASMKSSEVNQKPAGRPQSPAQPA 2250
A+E QQK+ S + PG V L NA K++EV P+ RPQ P Q A
Sbjct: 719 SASEPQQKVTASVGMTS-NVTPGMVLPLGNAP-KTTEVAAVPSVRPQVPMQSA 769
>gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japonica Group]
Length = 1267
Score = 629 bits (1622), Expect(2) = 0.0
Identities = 337/516 (65%), Positives = 385/516 (74%), Gaps = 5/516 (0%)
Frame = -1
Query: 2269 KVLLNQLPRNHLNDVGRIRMKPRDPRRILHNNMIQKSEN--PVS-EQINTNGTLSLDSHN 2099
+V + P + ND G IRMKPRDPRRILH+N++QK++ PV EQ +NGT DS +
Sbjct: 758 QVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTAPPDSQS 817
Query: 2098 DKDNLKVHEHGELAQLTGLPQPASLPDT--ARKFTNNLNNLPDIMSSSQLTSTSAPVLQS 1925
KD+L +++ + QL + P SLP T AR T N N + S+SQL +T+
Sbjct: 818 SKDHL-LNQDQKAEQLQAIALP-SLPVTSSARPVTMNANPV----SNSQLAATALMPPHG 871
Query: 1924 NSQLIPNKINKVDMMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQ 1745
N++ + +NK D A + + A+ + V A +P+GD+DHLL GYDDQQ
Sbjct: 872 NTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQQ 931
Query: 1744 KAAXXXXXXXXXXXQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDRE 1565
KA Q+KMFAARK LNSAKF EVD +H EILRKKEE DRE
Sbjct: 932 KALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQDRE 991
Query: 1564 KPQRHLFRLLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALF 1385
+ +RHLF HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK+YATEMAKVLDPTG LF
Sbjct: 992 RAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGTLF 1051
Query: 1384 AGRVISRXXXXXXXXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT 1205
AGRVISR +RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK NLIVVERYT
Sbjct: 1052 AGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERYT 1111
Query: 1204 YFPCSRRQFGLLGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILA 1025
YFPCSRRQFGL GPSLLEID DERPEDG+LASSLAVIERIH+NFFSH +LND DVR+ILA
Sbjct: 1112 YFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHKNFFSHPNLNDADVRSILA 1171
Query: 1024 AEQRKILGGCKIVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTD 845
+EQ++ILGGC+IVFSRIFPVGEANP +HPLW TAEQFGAVCTNQID+ VTHVVANSLGTD
Sbjct: 1172 SEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLGTD 1231
Query: 844 KVNWALSTGRFVVQPGWVEASALLYRRANEHDFLVK 737
KVNWALSTGRFVV PGWVEASALLYRRA+E DF VK
Sbjct: 1232 KVNWALSTGRFVVHPGWVEASALLYRRASELDFAVK 1267
Score = 298 bits (762), Expect(2) = 0.0
Identities = 215/571 (37%), Positives = 309/571 (54%), Gaps = 30/571 (5%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSETR--VPVINALVQQAFMGIQTVHSVVSSERSKDVEQN 3699
+SFE C RLR FENLKP+F E+ +P+++ALVQQAF+GI T+ +V +S EQ
Sbjct: 218 RSFEGACTRLRTCFENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKREQT 277
Query: 3698 KNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLDKDQGLHAGNGGVTNSSASIAGK 3519
KN+ L+LL HIKN+Y +L P+Q E+D+ VR LVF D + N TN++A
Sbjct: 278 KNMLLKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFEDGKDNANGPNATSTNAAAP---- 333
Query: 3518 PDVSSHGLASLEKPQTHSGVFNANLEPIRTPRIKAEFSPLLDLHAAYDESSLPSPTRENS 3339
G E+ SG N+ + P SPLLDLHA YDE+SLPSPTR++
Sbjct: 334 -----SGQVLSERLPFESGAGNS-FSKVEIPAKNRMVSPLLDLHADYDENSLPSPTRDSK 387
Query: 3338 LPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSVFSC 3159
P + +PIG +P +E ++ + D LKAV YQQK+GQ S F+
Sbjct: 388 PPFDVPKPIGYGALPMAPDRPSVLERVEPAKNSSYQSFNDALKAVCYYQQKHGQKSNFAS 447
Query: 3158 NQLPSPTPSEESNE-GDK-NDLNGEVSSYSAT-------LNARPLNPPNSSQPGSNAMFA 3006
+ LPSPTPS + ++ GDK D+ GEVSS+SA+ +N P P S+ ++ FA
Sbjct: 448 DDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRP--STVSSNSDSFA 505
Query: 3005 HSVSEHHKPSVNTAGSLGSLSKPVTKATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNA 2826
+ K N+ S S + KATAKSRDPRL+ + + G ++NR++ E N
Sbjct: 506 GGPPGYAKQIENSV----SGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNP 561
Query: 2825 AKNGPL--GEIMNTRKNKASHELVLDEHSYKKQRNNNAGPRNMPVVPGRGGWLEDGSFVT 2652
+K+ + G +N+RKNKA E ++DE++ K+ R R+M GRGGW +DG ++
Sbjct: 562 SKDRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPT-GRGGWAKDGGNIS 620
Query: 2651 HQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTTNASNS--GLVQ--------- 2505
SD N N +L + N I + ++N+TTN S + G+VQ
Sbjct: 621 SYSSDGFQPNQNTRLGNNTTGNHNIRT-DSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQ 679
Query: 2504 --NSSAINAAALLKDLKDNTAVNPTMLIQLL----QQSLAAETQQKILDPTHFASGSRLP 2343
++ A++ A+LKD+ AVNPTML+Q + Q+ A+E QQK+ S + P
Sbjct: 680 TSSAPAVSLPAMLKDI----AVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTS-NVTP 734
Query: 2342 GKVPTLNNASMKSSEVNQKPAGRPQSPAQPA 2250
G V L NA K++EV P+ RPQ P Q A
Sbjct: 735 GMVLPLGNAP-KTTEVAAVPSVRPQVPMQSA 764
>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao]
Length = 1290
Score = 654 bits (1686), Expect(2) = 0.0
Identities = 338/506 (66%), Positives = 389/506 (76%), Gaps = 7/506 (1%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
++ G+IRMKPRDPRR+LH N +Q+S + +Q+ TNG L+ + KDNL + +Q
Sbjct: 790 DESGKIRMKPRDPRRVLHGNSLQRSGSMGLDQLKTNGALTSSTQGSKDNLNAQKLD--SQ 847
Query: 2053 LTGLPQPASL---PDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPN----KIN 1895
P + L PD ++FTNNL N+ DIMS SQ ++ PV + L+P K +
Sbjct: 848 TESKPMQSQLVPPPDITQQFTNNLKNIADIMSVSQALTSLPPV---SHNLVPQPVLIKSD 904
Query: 1894 KVDMMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXX 1715
+DM + + +Q++ +G + E ++ +S N WGD++HL YDDQQKAA
Sbjct: 905 SMDMKALVSNSEDQQTGAGLAPEA-GATGPRSQNAWGDVEHLFERYDDQQKAAIQRERAR 963
Query: 1714 XXXXQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLL 1535
Q KMF+ARK LNSAKF EVD VH+EILRKKEE DREKP+RHLFR
Sbjct: 964 RIEEQKKMFSARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPERHLFRFH 1023
Query: 1534 HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXX 1355
HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G LFAGRVISR
Sbjct: 1024 HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDD 1083
Query: 1354 XXXXXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFG 1175
+RVP+SKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFG
Sbjct: 1084 GDPFDGDERVPRSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFG 1143
Query: 1174 LLGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGC 995
LLGPSLLEIDHDERPEDG+LASSLAVIERIHQ+FFSH++L+DVDVRNILA+EQRKIL GC
Sbjct: 1144 LLGPSLLEIDHDERPEDGTLASSLAVIERIHQDFFSHQNLDDVDVRNILASEQRKILAGC 1203
Query: 994 KIVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGR 815
+IVFSR+FPVGEANP LHPLW TAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTG+
Sbjct: 1204 RIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGK 1263
Query: 814 FVVQPGWVEASALLYRRANEHDFLVK 737
FVV PGWVEASALLYRRANE DF +K
Sbjct: 1264 FVVHPGWVEASALLYRRANEVDFAIK 1289
Score = 259 bits (662), Expect(2) = 0.0
Identities = 210/601 (34%), Positives = 304/601 (50%), Gaps = 37/601 (6%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMFSETRVPVINALVQQAFM 3759
+ +++ +LI EKSFE VC+RL + E+L+ + E VP +AL+Q AF
Sbjct: 212 ELEKRANLIRGVLEGVTVIEAEKSFEGVCSRLHNALESLRALILECSVPAKDALIQLAFG 271
Query: 3758 GIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVF---- 3591
I + ++ EQN + RLL +K +L P+++ EID M+ SL
Sbjct: 272 AINSAFVALNCNSK---EQNVAILSRLLSIVKGHDPSLFPPDKMKEIDVMLISLNSPARA 328
Query: 3590 LDKDQGLHAGNGGVTNSSASIAGKPDVSSHGLASLEK-PQTHSGVFN-------ANLEP- 3438
+D ++ + +G ++ P+ H L K P + V N L+P
Sbjct: 329 IDTEKDMKVVDGVNKKDPDAL---PENICHDLTVTNKLPSSAKFVINNKPNALTETLKPG 385
Query: 3437 IRTPRIKAEFSPLLDLHAAYDESSLPSPTRENSLPLPIQEPI---GVVTGAAISTQPLTH 3267
+ R + PLLDLH +D SLPSPTRE + LP+ +P+ V+ + T +H
Sbjct: 386 VPNFRNRGISLPLLDLHKDHDADSLPSPTRETTPCLPVNKPLTSGDVMVKSGFMTGKGSH 445
Query: 3266 MNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEV 3087
+A LHPY TD LKA S+YQQK+GQ S FS ++LPSPTPSEES + + D GEV
Sbjct: 446 ---DAEGDKLHPYETDALKAFSTYQQKFGQGSFFSSDRLPSPTPSEESGD-EGGDNGGEV 501
Query: 3086 SSYSATLNARPLNPPNSSQPGSNAMFAHSVSEHHKPSVNT--AGSLGSLSKPVTKATAKS 2913
SS S+ N +P P S+A S S + + T A + S+S V+K+ AKS
Sbjct: 502 SSSSSIGNFKPNLPILGHPIVSSAPLVDSASSSLQGQITTRNATPMSSVSNIVSKSLAKS 561
Query: 2912 RDPRLRLTSTEASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKKQ 2733
RDPRL ++ AS + R L NA+K P+G IM++RK K+ E +LD + K+Q
Sbjct: 562 RDPRLWFANSNASALDLNERLL----HNASKVAPVGGIMDSRKKKSVEEPILDSPALKRQ 617
Query: 2732 RN---NNAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYA 2562
RN N R++ V G GGWLED + Q ++++ + N++ ++ K NG
Sbjct: 618 RNELENLGVARDVQTVSGIGGWLEDTDAIGSQITNRNQTAENLESNSRKMDNGVTSSSTL 677
Query: 2561 EKKQDVNSTTNASNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLL----QQSLAAET 2394
K ++ TN V ++S + ALLKD+ AVNPTMLI +L QQ L AE
Sbjct: 678 SGKTNITVGTNEQVP--VTSTSTPSLPALLKDI----AVNPTMLINILKMGQQQRLGAEA 731
Query: 2393 QQKILDPT----HFASGSRLPGKV--------PTLNNASMKSSEVNQKPAGRPQSPAQPA 2250
QQK DP H S + L G V P++NN SS ++ KPAG Q P+
Sbjct: 732 QQKSPDPVKSTFHQPSSNSLLGVVSSTNVIPSPSVNNVPSISSGISSKPAGNLQVPSPDE 791
Query: 2249 S 2247
S
Sbjct: 792 S 792
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 625 bits (1612), Expect(2) = 0.0
Identities = 325/502 (64%), Positives = 373/502 (74%), Gaps = 2/502 (0%)
Frame = -1
Query: 2236 LNDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEH-GEL 2060
++++G++RMKPRDPRR+LH N +Q+S + + + T+G + + K+NL + G
Sbjct: 735 MDELGKVRMKPRDPRRVLHGNALQRSGS-LGPEFKTDGPSAPCTQGSKENLNFQKQLGAP 793
Query: 2059 AQLTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINK-VDM 1883
L Q PD ++FT NL ++ D MS SQ TS P++ NS + P +I DM
Sbjct: 794 EAKPVLSQSVLQPDITQQFTKNLKHIADFMSVSQ-PLTSEPMVSQNSPIQPGQIKSGADM 852
Query: 1882 MPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXX 1703
++++ +G E P A + WGD++HL GYDDQQKAA
Sbjct: 853 KAVVTNHDDKQTGTGSGPEAGPVGAHPQ-SAWGDVEHLFEGYDDQQKAAIQKERTRRLEE 911
Query: 1702 QNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGM 1523
Q KMF+ARK LNSAKF EVD VHDEILRKKEE DREKP RHLFR HMGM
Sbjct: 912 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGM 971
Query: 1522 WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXX 1343
WTKLRPGIW FLE+ASKL+E+HLYTMGNKLYATEMAKVLDP G LFAGRVISR
Sbjct: 972 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPF 1031
Query: 1342 XXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGP 1163
+RVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGP
Sbjct: 1032 DGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGP 1091
Query: 1162 SLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVF 983
SLLEIDHDER EDG+LASSL VIER+H+ FFSH+SL+DVDVRNILAAEQRKIL GC+IVF
Sbjct: 1092 SLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVF 1151
Query: 982 SRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQ 803
SR+FPVGEANP LHPLW TAEQFGAVCT ID+ VTHVVANSLGTDKVNWALSTGRFVV
Sbjct: 1152 SRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVH 1211
Query: 802 PGWVEASALLYRRANEHDFLVK 737
PGWVEASALLYRRANE DF +K
Sbjct: 1212 PGWVEASALLYRRANEQDFAIK 1233
Score = 254 bits (649), Expect(2) = 0.0
Identities = 198/559 (35%), Positives = 277/559 (49%), Gaps = 30/559 (5%)
Frame = -3
Query: 3869 SFEEVCARLRKSFENLKPMFSETRVPVINALVQQAFMGIQTVHSVVSSERSKDVEQNKNL 3690
SFE VC++L + E+L+ + +E VP +AL+Q AF +Q+VHSV S EQNK +
Sbjct: 192 SFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEI 251
Query: 3689 FLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFL--DKDQGLHAGNGGVTNSSASIAGKP 3516
RLL IK+ L Q+ E++ M+ SLV DK++ + A +G V ++I +
Sbjct: 252 LSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDMLAMHG-VNGKDSNIVTEN 310
Query: 3515 DVSSHGLASLEKPQTHSGVFNANLEPIRTP----RIKAEFSPLLDLHAAYDESSLPSPTR 3348
V+ S + N LE + R + PLLD H +D SLPSPTR
Sbjct: 311 AVNDLNFKEKVPLPVDSLMQNKPLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTR 370
Query: 3347 ENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSV 3168
E + +P+Q + V G S ++ A V Y TD L+A SSYQQK+G+ S
Sbjct: 371 ETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSF 430
Query: 3167 FSCNQLPSPTPSEESNEGDKNDLNGEVSSYSATLNARPLNPPN------SSQPG--SNAM 3012
F ++LPSPTPSEES +GD D GE+SS +A +P+N P SSQP S M
Sbjct: 431 FMNSELPSPTPSEESGDGD-GDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPM 489
Query: 3011 FAHSVSEHHKPSVNTAGSLG----SLSKPVTKATAKSRDPRLRLTSTEASGAPNSNRKLM 2844
SV + + S G PV KA KSRDPRLR S S A N N +
Sbjct: 490 DISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFAS---SNALNLNHQPA 546
Query: 2843 PVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKKQRN---NNAGPRNMPVVPGRGGWL 2673
P+ NA K P+G +M++RK K E VLD + K+QRN N+ R+ + G GGWL
Sbjct: 547 PILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWL 606
Query: 2672 EDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTTNASNSG-----LV 2508
ED Q +++L + + ++ K NG P + T N SG
Sbjct: 607 EDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPI-------TSGTPNVVVSGNEPAPAT 659
Query: 2507 QNSSAINAAALLKDLKDNTAVNPTMLIQLL----QQSLAAETQQKILDPTHFASGSRLPG 2340
S+ ++ ALLKD+ AVNPTML+ +L QQ LAA+ QQK D + +P
Sbjct: 660 TPSTTVSLPALLKDI----AVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNTMHPPIPS 715
Query: 2339 KVPTLNNASMKSSEVNQKP 2283
+P ++ S + KP
Sbjct: 716 SIPPVSVTCSIPSGILSKP 734
>gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indica Group]
Length = 1255
Score = 627 bits (1618), Expect(2) = 0.0
Identities = 336/516 (65%), Positives = 384/516 (74%), Gaps = 5/516 (0%)
Frame = -1
Query: 2269 KVLLNQLPRNHLNDVGRIRMKPRDPRRILHNNMIQKSEN--PVS-EQINTNGTLSLDSHN 2099
+V + P + ND G IRMKPRDPRRILH+N++QK++ PV EQ +NGT DS +
Sbjct: 746 QVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTAPPDSQS 805
Query: 2098 DKDNLKVHEHGELAQLTGLPQPASLPDT--ARKFTNNLNNLPDIMSSSQLTSTSAPVLQS 1925
KD+L +++ + QL + P SLP T AR T N N + S+SQL +T+
Sbjct: 806 SKDHL-LNQDQKAEQLQAIALP-SLPVTSSARPVTMNANPV----SNSQLAATALMPPHG 859
Query: 1924 NSQLIPNKINKVDMMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQ 1745
N++ + +NK D A + + A+ + V A +P+GD+DHLL GYDDQQ
Sbjct: 860 NTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDDQQ 919
Query: 1744 KAAXXXXXXXXXXXQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDRE 1565
KA Q+KMFAARK LNSAKF EVD +H EILRKKEE DRE
Sbjct: 920 KALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQDRE 979
Query: 1564 KPQRHLFRLLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALF 1385
+ +RHLF HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK+YATEMAKVLDPTG LF
Sbjct: 980 RAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGTLF 1039
Query: 1384 AGRVISRXXXXXXXXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT 1205
AGRVISR +RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK NLIVVERYT
Sbjct: 1040 AGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERYT 1099
Query: 1204 YFPCSRRQFGLLGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILA 1025
YFPCSRRQFGL GPSLLEID DERPEDG+LASSL VIERIH+NFFSH +LND DVR+ILA
Sbjct: 1100 YFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLTVIERIHKNFFSHPNLNDADVRSILA 1159
Query: 1024 AEQRKILGGCKIVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTD 845
+EQ++ILGGC+IVFSRIFPVGEANP +HPLW TAEQFGAVCTNQID+ VTHVVANSLGTD
Sbjct: 1160 SEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVCTNQIDDRVTHVVANSLGTD 1219
Query: 844 KVNWALSTGRFVVQPGWVEASALLYRRANEHDFLVK 737
KVNWALSTGRFVV PGWVEASALLYRRA+E DF VK
Sbjct: 1220 KVNWALSTGRFVVHPGWVEASALLYRRASELDFAVK 1255
Score = 251 bits (640), Expect(2) = 0.0
Identities = 196/569 (34%), Positives = 283/569 (49%), Gaps = 28/569 (4%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSETR--VPVINALVQQAFMGIQTVHSVVSSERSKDVEQN 3699
+SFE C RLR FENLKP+F E+ +P+++ALVQQAF+GI T+ +V +S EQ
Sbjct: 259 RSFEGACTRLRTCFENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKREQT 318
Query: 3698 KNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLDKDQGLHAGNGGVTNSSASIAGK 3519
KN+ L+LL HIKN+Y +L P+Q E+D+ VR LVF D + N TN++A
Sbjct: 319 KNMLLKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFEDGKDNANGPNATSTNAAAP---- 374
Query: 3518 PDVSSHGLASLEKPQTHSGVFNANLEPIRTPRIKAEFSPLLDLHAAYDESSLPSPTRENS 3339
G E+ SG N+ + P SPLLDLHA YDE+SLPSPTR+++
Sbjct: 375 -----SGQVLSERLPFESGAGNS-FSKVEIPAKNRMVSPLLDLHADYDENSLPSPTRDSA 428
Query: 3338 LPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSVFSC 3159
P + +PIG +P +E ++ + D LKAV YQQK+GQ S F+
Sbjct: 429 PPFDVPKPIGYGALPMAPDRPSVLERVEPAKNSSYQSFNDALKAVCYYQQKHGQKSNFAS 488
Query: 3158 NQLPSPTPSEESNE-GDK-NDLNGEVSSYSAT-------LNARPLNPPNSSQPGSNAMFA 3006
+ LPSPTPS + ++ GDK D+ GEVSS+SA+ +N P P S+ ++ FA
Sbjct: 489 DDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIVLPIVNQMPSRP--STVSSNSDSFA 546
Query: 3005 HSVSEHHKPSVNTAGSLGSLSKPVTKATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNA 2826
+ K N+ S S + KATAKSRDPRL+ + + G ++NR++ E N
Sbjct: 547 GGPPGYAKQIENSV----SGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNP 602
Query: 2825 AKNGPLGEIMNTRKNKASHELVLDEHSYKKQRNNNAGPRNMPVVPGRGGWLEDGSFVTHQ 2646
K GP V++ S +N G
Sbjct: 603 LKIGP---------------WVVEYQSIAPNQNTRLG----------------------- 624
Query: 2645 QSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTTNASNS--GLVQ----------- 2505
+ + N N++ D++ N +N+TTN S + G+VQ
Sbjct: 625 --NNTTGNHNIRTDSTLASN-------------LNNTTNNSGTSPGIVQAPQTNSAPQTS 669
Query: 2504 NSSAINAAALLKDLKDNTAVNPTMLIQLLQ----QSLAAETQQKILDPTHFASGSRLPGK 2337
++ A++ A+LKD+ AVNPTML+Q ++ + A+E QQK+ S + PG
Sbjct: 670 SAPAVSLPAMLKDI----AVNPTMLMQWIRMEHHKMSASEPQQKVTASVGMTS-NVTPGM 724
Query: 2336 VPTLNNASMKSSEVNQKPAGRPQSPAQPA 2250
V L NA K++EV P+ RPQ P Q A
Sbjct: 725 VLPLGNAP-KTTEVAAVPSVRPQVPMQSA 752
>ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [Sorghum bicolor]
gi|241935397|gb|EES08542.1| hypothetical protein
SORBIDRAFT_05g019010 [Sorghum bicolor]
Length = 1197
Score = 616 bits (1588), Expect(2) = 0.0
Identities = 322/503 (64%), Positives = 369/503 (73%), Gaps = 1/503 (0%)
Frame = -1
Query: 2242 NHLNDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGE 2063
N ND G +RMKPRDPRRILHNN+ QKS+ V EQ+ TNG DS KD
Sbjct: 711 NSQNDGGILRMKPRDPRRILHNNVAQKSDAMVLEQVKTNGITQPDSQGTKD--------- 761
Query: 2062 LAQLTGLPQPASLPDT-ARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINKVD 1886
Q + +P +LP + AR FTN + D +S+SQL +T+ + + +Q INKVD
Sbjct: 762 --QTSSMPSQPTLPSSVARPFTNTKH--VDPVSNSQLAATA---IMAPTQQALGSINKVD 814
Query: 1885 MMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXX 1706
A + A+ A+Q +PWG++DHLL GYDD+QKA
Sbjct: 815 PRLAVEQNGQNADATTTDASATELEATQPVSPWGNLDHLLDGYDDKQKALIQKERARRIT 874
Query: 1705 XQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMG 1526
Q+KMF+ARK LNSAKF EV+ +H+E+LRKKEE DR P+RHL+R HM
Sbjct: 875 EQHKMFSARKLCLVLDLDHTLLNSAKFIEVEPIHEEMLRKKEEQDRTLPERHLYRFHHMN 934
Query: 1525 MWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXX 1346
MWTKLRPGIWNFLEKAS L+ELHLYTMGNKLYATEMAKVLDPTG LFAGRVISR
Sbjct: 935 MWTKLRPGIWNFLEKASNLFELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDP 994
Query: 1345 XXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLG 1166
+RVPKSKDLDGVLGMESAVVIIDDSVRVWPHN+ NLIVVERYTYFPCSRRQFGL G
Sbjct: 995 FDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNRHNLIVVERYTYFPCSRRQFGLPG 1054
Query: 1165 PSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIV 986
PSLLEID DERPEDG+LASSLAVIERIH NFFSH +LN+ DVR+ILA+EQR+IL GC+IV
Sbjct: 1055 PSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHPNLNEADVRSILASEQRRILAGCRIV 1114
Query: 985 FSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVV 806
FSR+FPVG+A+P LHPLW TAEQFGAVCTN +D+ VTHVVANS GTDKVNWALS G+FVV
Sbjct: 1115 FSRVFPVGDASPHLHPLWQTAEQFGAVCTNLVDDRVTHVVANSPGTDKVNWALSKGKFVV 1174
Query: 805 QPGWVEASALLYRRANEHDFLVK 737
PGWVEASALLYRRANEHDF VK
Sbjct: 1175 HPGWVEASALLYRRANEHDFAVK 1197
Score = 257 bits (657), Expect(2) = 0.0
Identities = 203/587 (34%), Positives = 285/587 (48%), Gaps = 23/587 (3%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMFSETR----VPVINALVQ 3771
+ D++V I EKSFE C RL FENLKP+F E + ++ L+Q
Sbjct: 177 NLDQRVGSILEELEMVSIEEAEKSFEGACGRLHTCFENLKPLFQELENGSPMAILEPLMQ 236
Query: 3770 QAFMGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVF 3591
QAF+GI T+ +V S EQNK L+ L HIKN+Y +L PEQ E+D+ VR LVF
Sbjct: 237 QAFIGIDTLTTVAISYNLPRSEQNKTTLLKSLFHIKNRYSDMLTPEQRDELDSRVRKLVF 296
Query: 3590 LDKDQGLHAGNGGVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFN--ANLEPIRTPRIK 3417
+KD TN+ +A VSS G E SG N ++L + P
Sbjct: 297 GEKDNVSDPSTSSGTNAINVLAPSGQVSSSGGLPFE-----SGAANPFSSLPRLEVP--A 349
Query: 3416 AEFSPLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTL 3237
SPLLDLHA YDE+SLPSPTR+N+ P P+ +PIG + + +E ++L
Sbjct: 350 KRISPLLDLHADYDENSLPSPTRDNAPPFPVPKPIGFGAFPMVPEKLSFPERVEPAKNSL 409
Query: 3236 HPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPS-EESNEGDK-NDLNGEVSSYSATLN 3063
+P + DPLKAVSSYQQKYGQ SVF + LPSPTPS +E DK D+ EVSS+
Sbjct: 410 YPSLNDPLKAVSSYQQKYGQKSVFPSDDLPSPTPSGDEGKSADKGGDIFSEVSSFPV--- 466
Query: 3062 ARPLNPPNSSQPGSNAMFAHSVSEHHKPSVNTA----GSLGSLSKPVT------KATAKS 2913
P + + P ++ M A S ++ A G + +PV KA +KS
Sbjct: 467 -----PKSIALPSTSQMPASQPSTVSSSGISYASGPPGFAKQIEQPVAGPNHAIKAASKS 521
Query: 2912 RDPRLRLTSTEASGAPNSNRKLMPVESNAAKNGPL-GEIMNTRKNKASHELVLDEHSYKK 2736
RDPRLR + +++GA + NR+ + K+G L G + RK+KA + +DE+ K+
Sbjct: 522 RDPRLRFLNRDSAGATDVNRR---ANFSELKDGNLGGASVGNRKHKAIDDPQVDENVLKR 578
Query: 2735 QRNNNAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEK 2556
R A PR++ + N N ++ P N
Sbjct: 579 FRGGTANPRDL----------------------QPTGNPNQLMNIRAPTN---------- 606
Query: 2555 KQDVNSTTNASNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLL----QQSLAAETQQ 2388
+N T + SA A + L + AVNPT+L+ L+ Q+ A+ETQ
Sbjct: 607 SSGINMKTLQPPQTTAPHVSAAPAVPVPSMLLKDIAVNPTLLMHLIQMEHQKKSASETQG 666
Query: 2387 KILDPTHFASGSRLPGKVPTLNNASMKSSEVNQKPAGRPQSPAQPAS 2247
+ + S + + G V T NA K++E Q P+ RPQ PAQ S
Sbjct: 667 GM---SSGMSNNGIAGMVFTPGNAP-KTTEAAQVPSVRPQVPAQTPS 709
>ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Brachypodium distachyon]
Length = 1259
Score = 616 bits (1588), Expect(2) = 0.0
Identities = 332/507 (65%), Positives = 368/507 (72%), Gaps = 9/507 (1%)
Frame = -1
Query: 2230 DVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEH-GELAQ 2054
D G IRMKPRDPRRILHNN K++ SEQ +NG + S + KDN+ E E Q
Sbjct: 758 DAGVIRMKPRDPRRILHNNTSPKNDTTNSEQARSNGIVLPVSQDSKDNMINREQQAEQLQ 817
Query: 2053 LTGLP-QPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINKVDMMP 1877
LP QP SL + AR T + + + D +S+SQL ++S Q S IN+ D
Sbjct: 818 TGALPSQPVSLSNIARPSTMSAS-MVDPVSNSQLAASSLMAPQQTS----GSINRADPRL 872
Query: 1876 ATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQN 1697
A + A+ + A+ N WGD+D LL GYDDQQKA Q
Sbjct: 873 APGQNDPNADAATNASPATTLGAAPPANQWGDLDDLLSGYDDQQKALIQKERARRIMEQQ 932
Query: 1696 KMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMWT 1517
KMF+ARK LNSAKF EVD +H+EILRKKEE DRE+P+RHLFRL HM MWT
Sbjct: 933 KMFSARKLCLVLDLDHTLLNSAKFLEVDPIHEEILRKKEEQDRERPERHLFRLHHMSMWT 992
Query: 1516 KLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXXX 1337
KLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALF GRVISR
Sbjct: 993 KLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFEGRVISRGGDGTSRGG 1052
Query: 1336 XD-------RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQF 1178
RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK N+IVVERYTYFPCSRRQF
Sbjct: 1053 DGDSFDSDDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKNNMIVVERYTYFPCSRRQF 1112
Query: 1177 GLLGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGG 998
GL GPSLLEID DERPEDG+LASSLAVI RIHQNFFSH +LND DVR+ILA+EQR+IL G
Sbjct: 1113 GLPGPSLLEIDRDERPEDGTLASSLAVIGRIHQNFFSHPNLNDADVRSILASEQRRILAG 1172
Query: 997 CKIVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTG 818
C+IVFSRIFPVGEANP LHPLW +AEQFGAVCTNQID+ VTHVVANSLGTDKVNWAL TG
Sbjct: 1173 CRIVFSRIFPVGEANPHLHPLWQSAEQFGAVCTNQIDDRVTHVVANSLGTDKVNWALQTG 1232
Query: 817 RFVVQPGWVEASALLYRRANEHDFLVK 737
R+VV PGWVEASALLYRRA+EHDF VK
Sbjct: 1233 RYVVHPGWVEASALLYRRASEHDFAVK 1259
Score = 257 bits (656), Expect(2) = 0.0
Identities = 205/594 (34%), Positives = 306/594 (51%), Gaps = 31/594 (5%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMFSETR--VPVINALVQQA 3765
DFD++V I EKSFE C RLR FENLKP+F E+ +P+++ALVQQ
Sbjct: 187 DFDQRVGSILEELEMVSIEEAEKSFEGACERLRTCFENLKPLFLESGSPMPMLDALVQQG 246
Query: 3764 FMGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLD 3585
F+GI T+ +V +S QNK + L+LL H++N+Y +L P+Q E+D+ VR L F+D
Sbjct: 247 FVGIDTITTVANSYAMPKRVQNKEMLLKLLFHLRNRYSDMLTPDQRVELDSRVRQLAFVD 306
Query: 3584 KDQGLHAGNGGVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFN----ANLEPIRTPRIK 3417
++ N + +S ++ V G E+ SG N ++L + T
Sbjct: 307 GEENTDGPNASCSTNSTNV-----VVPTGQVPSERLPFESGATNPFSGSSLPWLETQTKN 361
Query: 3416 AEFSPLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTL 3237
SPLLDLHA +DE+SLPSPTR+N+ + +PIG + LT E L
Sbjct: 362 RMVSPLLDLHADHDENSLPSPTRDNAPQFSVPKPIGFGAFPMGPDRSLTE-RAEPSKKNL 420
Query: 3236 HPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPS--EESNEGDKNDLNGEVSSYSA--- 3072
+P V D L VSSY+QKY Q S F+ + LPSPTPS + +E D+ GE+SS+S+
Sbjct: 421 YPSVNDSLD-VSSYKQKYSQKSNFANDDLPSPTPSGDGDKSEDKDGDMFGEISSFSSSNK 479
Query: 3071 ----TLNARPLNPPNSSQPGSNAMFAHSVSEHHKPSVNTAGSLGSLSKPVTKATAKSRDP 2904
+++ P + P S+ SN F+ K + +G +L K +AKSRDP
Sbjct: 480 TALPSVSQIPASRP-STVSSSNGSFSGPPGYAKKIEQSVSGPNLAL-----KPSAKSRDP 533
Query: 2903 RLRLTSTEASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKKQRNN 2724
RLR + + A NR + E NA+ G LG K+KA + ++DE+ K+ R +
Sbjct: 534 RLRYLNRDPGDA---NRCMNFAEPNASLGGTLG------KHKAVGQPLMDENMVKRARGS 584
Query: 2723 NAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDV 2544
PR++ V PGR DGS ++ SD+ SN N +LDT N + ++ +V
Sbjct: 585 IGNPRDLQVPPGR-----DGSNISFYPSDRVQSNQNTRLDTKTTGNPNLRA-DSQLLSNV 638
Query: 2543 NSTTNAS-------NSG---LVQNSSAINAAALLKDLKDNTAVNPTML---IQLLQQSLA 2403
+S TN+S N+G V +SA + +L LKD AVNPT+L IQ+ QQ +
Sbjct: 639 SSITNSSVTSTKTLNAGQPDSVPQTSAAPSVSLPAVLKD-IAVNPTVLMHWIQMEQQKRS 697
Query: 2402 AETQQKILDPTHFASGSRLPGKVPTL---NNASMKSSEVNQKPAGRPQSPAQPA 2250
A Q+ ++ S + + +++K+++ Q P+ RPQ P Q A
Sbjct: 698 ASEPQQTVNTLGGISSGMINNDTAGMVIPPGSALKTADAAQIPSIRPQCPTQTA 751
>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
3 [Populus trichocarpa]
Length = 1190
Score = 622 bits (1604), Expect(2) = 0.0
Identities = 331/501 (66%), Positives = 374/501 (74%), Gaps = 2/501 (0%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
++ G+IRMKPRDPRR LHNN +Q++ + SEQ T TL+ + KD+ V + LA+
Sbjct: 697 DESGKIRMKPRDPRRFLHNNSLQRAGSMGSEQFKTT-TLTPTTQGTKDDQNVQKQEGLAE 755
Query: 2053 LTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSN--SQLIPNKINKVDMM 1880
L +P PD + FT +L N+ DI+S SQ ST+ P + N SQ + K +VD
Sbjct: 756 L----KPTVPPDISFPFTKSLENIADILSVSQ-ASTTPPFISQNVASQPMQTKSERVDGK 810
Query: 1879 PATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQ 1700
+ S+QK+ S EVV +S S S N W D++HL GYDDQQKAA Q
Sbjct: 811 TGIS-ISDQKTGPASSPEVVAAS-SHSQNTWKDVEHLFEGYDDQQKAAIQRERARRLEEQ 868
Query: 1699 NKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMW 1520
KMFAARK LNSAK +HDEILRKKEE DREKP RH+FR+ HMGMW
Sbjct: 869 KKMFAARKLCLVLDLDHTLLNSAKAILSSSLHDEILRKKEEQDREKPYRHIFRIPHMGMW 928
Query: 1519 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXX 1340
TKLRPGIWNFLEKASKL+ELHLYTMGNKLYATEMAKVLDP G LFAGRVISR
Sbjct: 929 TKLRPGIWNFLEKASKLFELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFD 988
Query: 1339 XXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPS 1160
+RVPKSKDL+GVLGMES VVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL GPS
Sbjct: 989 GDERVPKSKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPS 1048
Query: 1159 LLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVFS 980
LLEIDHDERPEDG+LA S AVIE+IHQNFF+HRSL++ DVRNILA+EQRKILGGC+I+FS
Sbjct: 1049 LLEIDHDERPEDGTLACSFAVIEKIHQNFFTHRSLDEADVRNILASEQRKILGGCRILFS 1108
Query: 979 RIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQP 800
R+FPVGE NP LHPLW AEQFGAVCTNQIDE VTHVVANSLGTDKVNWALSTGR VV P
Sbjct: 1109 RVFPVGEVNPHLHPLWQMAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRIVVHP 1168
Query: 799 GWVEASALLYRRANEHDFLVK 737
GWVEASALLYRRANE DF +K
Sbjct: 1169 GWVEASALLYRRANEQDFSIK 1189
Score = 250 bits (639), Expect(2) = 0.0
Identities = 209/600 (34%), Positives = 290/600 (48%), Gaps = 34/600 (5%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMF--SETRVPVINALVQQA 3765
D + +V I EKSFE VC +L K E+LK + ++ P + LVQ
Sbjct: 143 DVENRVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQLL 202
Query: 3764 FMGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEI------DTMVR 3603
FM I+ V+SV S K EQNK +F R + + Y P Q E+ D++ +
Sbjct: 203 FMAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEVLNENHNDSLAK 262
Query: 3602 SLVFLDKDQGLHAGNGGVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFNANLEPIRTPR 3423
+ AG T S A + V + S+E P+ P P
Sbjct: 263 T-----------AGYDLTTMSEKLPAAETFVQNKPNKSIEAPK-----------PPGVPS 300
Query: 3422 IKAE--FSPLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAV 3249
K+ PLLDL +DE SLPSPT+E + P P+Q + + G S P+ + A
Sbjct: 301 FKSRGVLLPLLDLKKYHDEDSLPSPTQETT-PFPVQRLLAIGDGMVSSGLPVPKVTPVAE 359
Query: 3248 VSTLHPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEVSSYSAT 3069
+HPY TD LKAVSSYQQK+ + S F+ N+LPSPTPSEES GD D GEVSS S
Sbjct: 360 EPRMHPYETDALKAVSSYQQKFNRNSFFT-NELPSPTPSEESGNGD-GDTAGEVSSSSTV 417
Query: 3068 LNARPLNPPNSSQ-------PGSNAMFAHSVSEHHKPSVNTAGSLGSLSKP--VTKATAK 2916
+N R +NPP S Q P H S + + V T S S P KA+AK
Sbjct: 418 VNYRTVNPPVSDQKNAPPSPPPLPPPPPHPDSSNIRGVVPTRNSAPVSSGPSSTIKASAK 477
Query: 2915 SRDPRLRLTSTEASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKK 2736
SRDPRLR + +A A + N++ +P+ +N + P G I+ ++K+K + VLD+ S K+
Sbjct: 478 SRDPRLRYVNIDAC-ALDHNQRALPMVNNLPRVEPAGAIVGSKKHKIEED-VLDDPSLKR 535
Query: 2735 QRN---NNAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSL----SNVNVQLDTSKPKNGEI 2577
QRN N R++ + G GGWLED Q +K+ SNVN + P G I
Sbjct: 536 QRNSFDNYGAVRDIESMTGTGGWLEDTDMAEPQTVNKNQWAENSNVNGSGNAQSPFMG-I 594
Query: 2576 GPFYAEKKQDVNSTTNASNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLL----QQS 2409
++ V ST S L DL + AVNPTMLI +L QQ
Sbjct: 595 SNITGSEQAQVTSTATTS----------------LPDLLKDIAVNPTMLINILKMGQQQR 638
Query: 2408 LAAETQQKILDP----THFASGSRLPGKVPTLNNASMKSSEVNQKPAGRPQSPAQPASTE 2241
LA + QQ + DP +H + + G +PT+N AS + S + +PAG P P+Q A+++
Sbjct: 639 LALDGQQTLSDPAKSTSHPPISNTVLGAIPTVNVASSQPSGIFPRPAGTP-VPSQIATSD 697
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 637 bits (1642), Expect(2) = 0.0
Identities = 337/501 (67%), Positives = 379/501 (75%), Gaps = 2/501 (0%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
++ G+IRMKPRDPRR+LHNN +Q++ + SEQ T TL+ + KDN + + LA+
Sbjct: 754 DESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTT-TLTSTTQGTKDNQNLQKQEGLAE 812
Query: 2053 LTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSN--SQLIPNKINKVDMM 1880
L +P PD + FT +L N+ DI+S SQ T T+ P + N SQ + K ++VD
Sbjct: 813 L----KPVVPPDISSPFTKSLKNIADIVSVSQ-TCTTPPFVSQNVASQPVQIKSDRVDGK 867
Query: 1879 PATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQ 1700
+ S+QK S EVV +S S S N W D++HL GYDDQQKAA Q
Sbjct: 868 TGISN-SDQKMGPASSPEVVAAS-SLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQ 925
Query: 1699 NKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMW 1520
K+FAARK LNSAKF EVD VHDEILRKKEE DREKP RHLFR HMGMW
Sbjct: 926 KKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMW 985
Query: 1519 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXX 1340
TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G LFAGRV+SR
Sbjct: 986 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLD 1045
Query: 1339 XXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPS 1160
+RVPKSKDL+GVLGMES VVIIDDS+RVWPHNKLNLIVVERY YFPCSRRQFGL GPS
Sbjct: 1046 GDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPS 1105
Query: 1159 LLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVFS 980
LLEIDHDERPEDG+LA SLAVIERIHQNFF+H SL++ DVRNILA+EQRKIL GC+IVFS
Sbjct: 1106 LLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCRIVFS 1165
Query: 979 RIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQP 800
R+FPVGE NP LHPLW +AEQFGAVCTNQIDE VTHVVANSLGTDKVNWALSTGRFVV P
Sbjct: 1166 RVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHP 1225
Query: 799 GWVEASALLYRRANEHDFLVK 737
GWVEASALLYRRANE DF +K
Sbjct: 1226 GWVEASALLYRRANEQDFAIK 1246
Score = 235 bits (599), Expect(2) = 0.0
Identities = 198/608 (32%), Positives = 286/608 (47%), Gaps = 42/608 (6%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMF--SETRVPVINALVQQA 3765
D +++V I +KSFE VC +L + E+LK + +E P ++LV+
Sbjct: 174 DTEKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLL 233
Query: 3764 FMGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEI------DTMVR 3603
F I V+S SS K EQNK +F+R L + + + PE E+ D +
Sbjct: 234 FTAIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEVCDFCNFDFRIV 293
Query: 3602 SLVFLDKDQGLHAGNGGVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFNANLEPIRTPR 3423
SL + L N + + + + KP+ S +E P+ F +
Sbjct: 294 SLCY-----DLTTMNRLPSAAESFVHNKPNFS------IEPPKPGVPSFKS--------- 333
Query: 3422 IKAEFSPLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVS 3243
+ PLLDL +DE SLPSPTRE + P+Q + + G S P+ +
Sbjct: 334 -RGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASITEEP 392
Query: 3242 TLHPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEVSSYSATLN 3063
+HPY TD LKAVSSYQ+K+ S F+ N+LPSPTPSEES GD D GEVSS S+T+N
Sbjct: 393 RVHPYETDALKAVSSYQKKFNLNSFFT-NELPSPTPSEESGNGD-GDTAGEVSS-SSTVN 449
Query: 3062 ARPLNPP----NSSQPGSNAMFAHSVSEHHKPSVN-----------TAGSLGSLSKPVTK 2928
R +NPP S+ P + P +N + + S + K
Sbjct: 450 YRTVNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSSTVK 509
Query: 2927 ATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEH 2748
A+AKSRDPRLR +T+AS + R L+ V +N + P G I +RK K + VLD
Sbjct: 510 ASAKSRDPRLRYVNTDASALDQNQRTLLMV-NNPPRAEPSGAIAGSRKQKIEED-VLDGT 567
Query: 2747 SYKKQRN---NNAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEI 2577
S K+QRN N R++ + G GGWLED Q +K+ N + + NG +
Sbjct: 568 SLKRQRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAE-PGQRINNGVV 626
Query: 2576 GPFYAEKKQDVNSTTNA--------SNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQL 2421
P V+ + N + +G Q A L DL + VNPTMLI +
Sbjct: 627 CPSTGSVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINI 686
Query: 2420 L----QQSLAAETQQKILDP----THFASGSRLPGKVPTLNNASMKSSEVNQKPAGRPQS 2265
L QQ LA + QQK+ DP +H S + + G +P +N S S + + AG+ Q
Sbjct: 687 LKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQG 746
Query: 2264 PAQPASTE 2241
P+Q A+T+
Sbjct: 747 PSQIATTD 754
>ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Setaria italica]
Length = 1074
Score = 614 bits (1583), Expect(2) = 0.0
Identities = 333/514 (64%), Positives = 373/514 (72%), Gaps = 3/514 (0%)
Frame = -1
Query: 2269 KVLLNQLPRNHLNDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKD 2090
+VL+ P N ND G +RMKPRDPRRILHN++ QK++ EQ +NGT DS KD
Sbjct: 581 QVLMQTPPLNSQNDTGILRMKPRDPRRILHNSIAQKTDAVGLEQHKSNGTKP-DSQGTKD 639
Query: 2089 NLKVHEHGELAQLTGL-PQPASLPDTARKFTNNLNNLPDIMSSSQLTSTS--APVLQSNS 1919
Q T + QPA + AR FT + ++ D +S+SQL +T+ AP Q++S
Sbjct: 640 -----------QTTSMVSQPALVSGIARPFTMSTKHV-DPVSNSQLAATALMAPTQQASS 687
Query: 1918 QLIPNKINKVDMMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKA 1739
L +VD P A N +A + P A Q NPWGD+DHLL GYDDQQKA
Sbjct: 688 SL-----TRVD--PRLAVEQNGHNAYAANAPATPLEAVQPVNPWGDVDHLLDGYDDQQKA 740
Query: 1738 AXXXXXXXXXXXQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKP 1559
Q+KMF+ARK LNSAKF EVD VH+EILRKKEE DR P
Sbjct: 741 LIQKERARRITEQHKMFSARKLCLVLDLDHTLLNSAKFIEVDSVHEEILRKKEEQDRSMP 800
Query: 1558 QRHLFRLLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAG 1379
+RHL+R HM MWTKLRPGIWNFL+KASKL+ELHLYTMGNKLYATEMAKVLDPTG LFAG
Sbjct: 801 ERHLYRFHHMNMWTKLRPGIWNFLDKASKLFELHLYTMGNKLYATEMAKVLDPTGTLFAG 860
Query: 1378 RVISRXXXXXXXXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYF 1199
RVISR +R+PKSKDLDGVLGMESAVVIIDDSVRVWPHN+ NLIVVERYTYF
Sbjct: 861 RVISRGDDGDPFDSDERLPKSKDLDGVLGMESAVVIIDDSVRVWPHNRHNLIVVERYTYF 920
Query: 1198 PCSRRQFGLLGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAE 1019
PCSRRQFGL GPSLLEID DERPEDG+LASSLAVIERIH NFFSH LN+ DVR IL+ E
Sbjct: 921 PCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHPKLNEADVRTILSDE 980
Query: 1018 QRKILGGCKIVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKV 839
Q++IL GC IVFSR+FPVG+ P LHPLW TAEQFGAVCTN IDE VTHVVANSLGTDKV
Sbjct: 981 QKRILAGCHIVFSRVFPVGDTKPHLHPLWQTAEQFGAVCTNLIDEKVTHVVANSLGTDKV 1040
Query: 838 NWALSTGRFVVQPGWVEASALLYRRANEHDFLVK 737
NWALSTGRFVV PGWVEASALLYRRANE DFLVK
Sbjct: 1041 NWALSTGRFVVHPGWVEASALLYRRANELDFLVK 1074
Score = 251 bits (640), Expect(2) = 0.0
Identities = 200/553 (36%), Positives = 294/553 (53%), Gaps = 18/553 (3%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSE--TRVPVINALVQQAFMGIQTVHSVVSSERSKDVEQN 3699
+SFE CARL FENLKP++ E + +P+++ LV QAF+GI T+ +V +S EQN
Sbjct: 83 RSFEGTCARLHTCFENLKPLYPENGSPMPILDPLVHQAFIGIDTLTTVANSYNLPRKEQN 142
Query: 3698 KNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLDKDQGLHAGNGGVTNSSASIAGK 3519
K + L+LL HIKN+Y ++L +Q E+D+ VR LVF DKD G S +G+
Sbjct: 143 KTMLLKLLFHIKNRYSSILTLDQRDELDSRVRQLVFEDKDNVNDPSTSGSAPSGQVSSGR 202
Query: 3518 PDVSSHGLASLEKPQTHSGVFNANLEPIRTPRIKAEFSPLLDLHAAYDESSLPSPTRENS 3339
S G A+ + SG LE I RI SPLLDLHA YDE+SLPSPTR+N+
Sbjct: 203 LPYES-GAAN-----SFSGSSLPRLE-IPAKRI----SPLLDLHADYDENSLPSPTRDNA 251
Query: 3338 LPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSVFSC 3159
P P+ +PIG + +P + E+ ++++P + DPLKAVSSYQQKYGQ SVF
Sbjct: 252 PPFPVPKPIGFGAFPMVPERP-SFPERESGRNSIYPSLNDPLKAVSSYQQKYGQKSVFPS 310
Query: 3158 NQLPSPTPS-EESNEGDK-NDLNGEVSSYSA-------TLNARPLNPPNSSQPGSNAMFA 3006
+ LPSPTPS ++ DK D+ GE+SS+ A + + P + PN++ GSN +A
Sbjct: 311 DDLPSPTPSGDDGKSADKGGDIFGEISSFPAPKKTALPSTSQMPASQPNTTS-GSNISYA 369
Query: 3005 HSVSEHHKPSVNTAGSLGSLSKPVTKATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNA 2826
+ K A L + KAT+KSRDPRLR + +++GA ++N++ V +
Sbjct: 370 GGPPGYGK----QAEQLAAGPNHALKATSKSRDPRLRFLNRDSAGATDANQR---VNFSD 422
Query: 2825 AKNGPLGEIMNT--RKNKASHELVLDEHSYKKQRNNNAGPRNMPVVPGRGGWLEDGSFVT 2652
K+G LG + T RK+KA E +DE+ K+ R PRNM V G L
Sbjct: 423 LKDGNLGAGVPTINRKHKAVDEPQVDENVLKRFRLGAGDPRNMLVPTGNPNQL------- 475
Query: 2651 HQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTTNASNSGLVQNSSAINAAALL 2472
++N+ ++S G PF T +S + + ++LL
Sbjct: 476 -------MTNMRAPPNSS----GATTPFL--------HPTQSSAPQISAPPAVSLPSSLL 516
Query: 2471 KDLKDNTAVNPTML---IQLLQQSLAAETQQKILDPTHFASGSRLPGKVPTL--NNASMK 2307
KD+ A NPT+L I++ QQ ++A Q++ +SG+ G T+ ++ K
Sbjct: 517 KDI----AGNPTVLMNWIKMEQQKMSASEPQQVA----MSSGTISIGIAGTVLPPGSAPK 568
Query: 2306 SSEVNQKPAGRPQ 2268
++E Q P+ RPQ
Sbjct: 569 TTEAAQVPSVRPQ 581
>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Vitis vinifera]
Length = 1238
Score = 635 bits (1638), Expect(2) = 0.0
Identities = 332/501 (66%), Positives = 377/501 (75%), Gaps = 1/501 (0%)
Frame = -1
Query: 2236 LNDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELA 2057
+++ G++RMKPRDPRRILH N Q+S + SEQ TN D K V H
Sbjct: 752 MDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQTETKS---VPSHS--- 805
Query: 2056 QLTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQS-NSQLIPNKINKVDMM 1880
+ PD +++FT NL N+ D+MS+SQ +S + Q +SQ + +++D+
Sbjct: 806 --------VNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVK 857
Query: 1879 PATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQ 1700
+++ +Q +A+G E + QS N WGD++HL GYDDQQKAA Q
Sbjct: 858 ATVSDSGDQLTANGSKPESA-AGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQ 916
Query: 1699 NKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMW 1520
KMF+ARK LNSAKF EVD VHDEILRKKEE DREK QRHLFR HMGMW
Sbjct: 917 KKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMW 976
Query: 1519 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXX 1340
TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G LFAGRVIS+
Sbjct: 977 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLD 1036
Query: 1339 XXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPS 1160
+RVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL GPS
Sbjct: 1037 GDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPS 1096
Query: 1159 LLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVFS 980
LLEIDHDERPEDG+LASSLAVIERIHQ+FFS+R+L++VDVRNILA+EQRKIL GC+IVFS
Sbjct: 1097 LLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFS 1156
Query: 979 RIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQP 800
R+FPVGEANP LHPLW TAE FGAVCTNQIDE VTHVVANSLGTDKVNWALSTGRFVV P
Sbjct: 1157 RVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHP 1216
Query: 799 GWVEASALLYRRANEHDFLVK 737
GWVEASALLYRRANE DF +K
Sbjct: 1217 GWVEASALLYRRANEQDFAIK 1237
Score = 224 bits (572), Expect(2) = 0.0
Identities = 191/568 (33%), Positives = 282/568 (49%), Gaps = 31/568 (5%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSE-----TRVPVINALVQQAFMGIQTVHSVVSSERSKDV 3708
KSF VC+RL+ + +L+ +F E + VP +AL QQ I+ ++ V S S
Sbjct: 203 KSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQK 262
Query: 3707 EQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVR---------SLVFLDKDQGLHAGNG 3555
E NK++F RLL ++ + + + E++ M+ S DK + +G
Sbjct: 263 ELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDG 322
Query: 3554 ---GVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFNAN----LEP-IRTPRIKAEFSPL 3399
+ +SS +G+ S+ L SL+ S +N N L+P + + R + F PL
Sbjct: 323 MNRNILDSSVESSGRAFASAKKL-SLDSISVES--YNQNNPDALKPGLSSSRGRFIFGPL 379
Query: 3398 LDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTD 3219
LDLH +DE SLPSPT + P+ + V A TQ S +HPY TD
Sbjct: 380 LDLHKDHDEDSLPSPTGKAPQCFPVNKSELVTAKVAHETQD----------SIMHPYETD 429
Query: 3218 PLKAVSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEVSSYSA-----TLNARP 3054
LKAVS+YQQK+G TS ++LPSPTPSEES + D++GEVSS S T NA
Sbjct: 430 ALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGD-TYGDISGEVSSSSTISAPITANAPA 488
Query: 3053 L-NPPNSSQPGSNAMFAHSVSEHHKPSVNTAGSLGSLSKPVTKATAKSRDPRLRLTSTEA 2877
L +P SS P ++ + S+ ++G L V A+AKSRDPRLRL S++A
Sbjct: 489 LGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGP--HLDSSVV-ASAKSRDPRLRLASSDA 545
Query: 2876 SGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKKQRNNNAGP---RN 2706
G+ + N + +P SN+ K PLGEI+++RK K++ E +LD K+QRN P R+
Sbjct: 546 -GSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRD 604
Query: 2705 MPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTTNA 2526
V GGWLED + V Q +++ N D K ++ K V N
Sbjct: 605 AQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKVTVTGIGCDKPYVTVNGN- 663
Query: 2525 SNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLLQQSLAAETQQKILDPTHFASGSRL 2346
+ +V S+ + +LLKD+ N AV + ++ QQ + +L PT + +
Sbjct: 664 EHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPT----SNSI 719
Query: 2345 PGKVPTLNNASMKSSEVNQKPAGRPQSP 2262
G VP + A +K S + QKPAG Q P
Sbjct: 720 LGVVPPASVAPLKPSALGQKPAGALQVP 747
>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343307|gb|EEE79693.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1030
Score = 637 bits (1642), Expect(2) = 0.0
Identities = 337/501 (67%), Positives = 379/501 (75%), Gaps = 2/501 (0%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
++ G+IRMKPRDPRR+LHNN +Q++ + SEQ T TL+ + KDN + + LA+
Sbjct: 537 DESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTT-TLTSTTQGTKDNQNLQKQEGLAE 595
Query: 2053 LTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSN--SQLIPNKINKVDMM 1880
L +P PD + FT +L N+ DI+S SQ T T+ P + N SQ + K ++VD
Sbjct: 596 L----KPVVPPDISSPFTKSLKNIADIVSVSQ-TCTTPPFVSQNVASQPVQIKSDRVDGK 650
Query: 1879 PATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQ 1700
+ S+QK S EVV +S S S N W D++HL GYDDQQKAA Q
Sbjct: 651 TGISN-SDQKMGPASSPEVVAAS-SLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQ 708
Query: 1699 NKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMW 1520
K+FAARK LNSAKF EVD VHDEILRKKEE DREKP RHLFR HMGMW
Sbjct: 709 KKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMW 768
Query: 1519 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXX 1340
TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G LFAGRV+SR
Sbjct: 769 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLD 828
Query: 1339 XXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPS 1160
+RVPKSKDL+GVLGMES VVIIDDS+RVWPHNKLNLIVVERY YFPCSRRQFGL GPS
Sbjct: 829 GDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPS 888
Query: 1159 LLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVFS 980
LLEIDHDERPEDG+LA SLAVIERIHQNFF+H SL++ DVRNILA+EQRKIL GC+IVFS
Sbjct: 889 LLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCRIVFS 948
Query: 979 RIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQP 800
R+FPVGE NP LHPLW +AEQFGAVCTNQIDE VTHVVANSLGTDKVNWALSTGRFVV P
Sbjct: 949 RVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHP 1008
Query: 799 GWVEASALLYRRANEHDFLVK 737
GWVEASALLYRRANE DF +K
Sbjct: 1009 GWVEASALLYRRANEQDFAIK 1029
Score = 219 bits (559), Expect(2) = 0.0
Identities = 181/537 (33%), Positives = 258/537 (48%), Gaps = 48/537 (8%)
Frame = -3
Query: 3707 EQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLDKDQGLHAGNGGVTNSSASI 3528
EQNK +F+R L + + + PE EI+ MV SL D AG T S +
Sbjct: 7 EQNKGVFMRFLSLVNSHDPSFFSPEHTKEIELMVSSLDSHDILSSSRAGEERETQVSGKV 66
Query: 3527 AGKPDVS-----SHGLASLEKPQTHSGVF-----NANLEPIR--TPRIKAE--FSPLLDL 3390
+ + S + L ++ + + + F N ++EP + P K+ PLLDL
Sbjct: 67 NERDNDSLSKTAGYDLTTMNRLPSAAESFVHNKPNFSIEPPKPGVPSFKSRGVLLPLLDL 126
Query: 3389 HAAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLK 3210
+DE SLPSPTRE + P+Q + + G S P+ + +HPY TD LK
Sbjct: 127 KKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASITEEPRVHPYETDALK 186
Query: 3209 AVSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEVSSYSATLNARPLNPP---- 3042
AVSSYQ+K+ S F+ N+LPSPTPSEES GD D GEVSS S+T+N R +NPP
Sbjct: 187 AVSSYQKKFNLNSFFT-NELPSPTPSEESGNGD-GDTAGEVSS-SSTVNYRTVNPPVSDR 243
Query: 3041 NSSQPGSNAMFAHSVSEHHKPSVN-----------TAGSLGSLSKPVTKATAKSRDPRLR 2895
S+ P + P +N + + S + KA+AKSRDPRLR
Sbjct: 244 KSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSSTVKASAKSRDPRLR 303
Query: 2894 LTSTEASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKKQRN---N 2724
+T+AS + R L+ V +N + P G I +RK K + VLD S K+QRN N
Sbjct: 304 YVNTDASALDQNQRTLLMV-NNPPRAEPSGAIAGSRKQKIEED-VLDGTSLKRQRNSFDN 361
Query: 2723 NAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDV 2544
R++ + G GGWLED Q +K+ N + + NG + P V
Sbjct: 362 FGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAE-PGQRINNGVVCPSTGSVMSSV 420
Query: 2543 NSTTNA--------SNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLL----QQSLAA 2400
+ + N + +G Q A L DL + VNPTMLI +L QQ LA
Sbjct: 421 SCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQRLAL 480
Query: 2399 ETQQKILDP----THFASGSRLPGKVPTLNNASMKSSEVNQKPAGRPQSPAQPASTE 2241
+ QQK+ DP +H S + + G +P +N S S + + AG+ Q P+Q A+T+
Sbjct: 481 DGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQIATTD 537
>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
Length = 1184
Score = 637 bits (1644), Expect(2) = 0.0
Identities = 334/505 (66%), Positives = 378/505 (74%), Gaps = 1/505 (0%)
Frame = -1
Query: 2248 PRNHLNDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEH 2069
P N ++ G++RMKPRDPRRILH N Q+S + SEQ TN D K V H
Sbjct: 694 PMNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQTETKS---VPSH 750
Query: 2068 GELAQLTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQS-NSQLIPNKINK 1892
+ PD +++FT NL N+ D+MS+SQ +S + Q +SQ + ++
Sbjct: 751 S-----------VNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDR 799
Query: 1891 VDMMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXX 1712
+D+ +++ +Q +A+G E + QS N WGD++HL GYDDQQKAA
Sbjct: 800 MDVKATVSDSGDQLTANGSKPESA-AGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARR 858
Query: 1711 XXXQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLH 1532
Q KMF+ARK LNSAKF EVD VHDEILRKKEE DREK QRHLFR H
Sbjct: 859 IEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPH 918
Query: 1531 MGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXX 1352
MGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G LFAGRVIS+
Sbjct: 919 MGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDG 978
Query: 1351 XXXXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL 1172
+RVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL
Sbjct: 979 DVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL 1038
Query: 1171 LGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCK 992
GPSLLEIDHDERPEDG+LASSLAVIERIHQ+FFS+R+L++VDVRNILA+EQRKIL GC+
Sbjct: 1039 PGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCR 1098
Query: 991 IVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRF 812
IVFSR+FPVGEANP LHPLW TAE FGAVCTNQIDE VTHVVANSLGTDKVNWALSTGRF
Sbjct: 1099 IVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRF 1158
Query: 811 VVQPGWVEASALLYRRANEHDFLVK 737
VV PGWVEASALLYRRANE DF +K
Sbjct: 1159 VVHPGWVEASALLYRRANEQDFAIK 1183
Score = 199 bits (507), Expect(2) = 0.0
Identities = 171/542 (31%), Positives = 251/542 (46%), Gaps = 5/542 (0%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSE-----TRVPVINALVQQAFMGIQTVHSVVSSERSKDV 3708
KSF VC+RL+ + +L+ +F E + VP +AL QQ I+ ++ V S S
Sbjct: 214 KSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQK 273
Query: 3707 EQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLDKDQGLHAGNGGVTNSSASI 3528
E NK++F RLL ++ + + + E++ M+ FLD + + +
Sbjct: 274 ELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMS---FLDTPAAQSSAEASDKVNDVQV 330
Query: 3527 AGKPDVSSHGLASLEKPQTHSGVFNANLEPIRTPRIKAEFSPLLDLHAAYDESSLPSPTR 3348
D + + L+ SG A+ + R I F PLLDLH +DE SLPSPT
Sbjct: 331 T---DGMNRNI--LDSSVESSGRAFASAKKFRGRFI---FGPLLDLHKDHDEDSLPSPTG 382
Query: 3347 ENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSV 3168
+ P+ + V A TQ S +HPY TD LKAVS+YQQK+G TS
Sbjct: 383 KAPQCFPVNKSELVTAKVAHETQD----------SIMHPYETDALKAVSTYQQKFGLTSF 432
Query: 3167 FSCNQLPSPTPSEESNEGDKNDLNGEVSSYSATLNARPLNPPNSSQPGSNAMFAHSVSEH 2988
++LPSPTPSEES + D++GEVSS S N P P ++ + +
Sbjct: 433 LPIDKLPSPTPSEESGD-TYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDIVQG 491
Query: 2987 HKPSVNTAGSLGSLSKPVTKATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNAAKNGPL 2808
NT G++ S + +A+AKSRDPRLRL S++A G+ + N + +P SN+ K PL
Sbjct: 492 LVVPRNT-GAVNSRFNSILRASAKSRDPRLRLASSDA-GSLDLNERPLPAVSNSPKVDPL 549
Query: 2807 GEIMNTRKNKASHELVLDEHSYKKQRNNNAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSL 2628
GEI+++RK K++ E +LD K+QRN P LE VT DK
Sbjct: 550 GEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATK---------LESKVTVTGIGCDKPY 600
Query: 2627 SNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTTNASNSGLVQNSSAINAAALLKDLKDNTA 2448
VN + +V S+ + +LLKD+ N A
Sbjct: 601 VTVN----------------------------GNEHLPVVATSTTASLQSLLKDIAVNPA 632
Query: 2447 VNPTMLIQLLQQSLAAETQQKILDPTHFASGSRLPGKVPTLNNASMKSSEVNQKPAGRPQ 2268
V + ++ QQ + +L PT + + G VP + A +K S + QKPAG Q
Sbjct: 633 VWMNIFNKVEQQKSGDPAKNTVLPPT----SNSILGVVPPASVAPLKPSALGQKPAGALQ 688
Query: 2267 SP 2262
P
Sbjct: 689 VP 690
>gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Zea mays]
Length = 1234
Score = 608 bits (1567), Expect(2) = 0.0
Identities = 318/502 (63%), Positives = 369/502 (73%), Gaps = 1/502 (0%)
Frame = -1
Query: 2248 PRNHLNDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEH 2069
P N ND G +RMKPRDPRRILHNN+ QKS+ EQ+ NGT DS KD
Sbjct: 749 PLNSQNDGGIVRMKPRDPRRILHNNIAQKSDAMSLEQVKNNGTTQPDSQGTKD------- 801
Query: 2068 GELAQLTGLPQPASLPDT-ARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINK 1892
Q T +P +LP + AR F++ + D +S+SQL +T+ + + +Q + + +NK
Sbjct: 802 ----QTTPVPSQPALPSSIARPFSSAKH--VDPVSNSQLAATA---IMAPTQAL-SSVNK 851
Query: 1891 VDMMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXX 1712
VD A + A+ A+Q +PWGD+DHLL GYDDQQKA
Sbjct: 852 VDPRLAVEQNGQNADATTNGASATTLEATQPVSPWGDVDHLLDGYDDQQKALIQKERARR 911
Query: 1711 XXXQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLH 1532
Q+KMF+ARK LNSAKF EV+ +H+E+LRKKEE DR P+RHL+R H
Sbjct: 912 ITEQHKMFSARKLCLVLDLDHTLLNSAKFIEVEPIHEEMLRKKEEQDRTLPERHLYRFHH 971
Query: 1531 MGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXX 1352
M MWTKLRPGIWNFL+KAS L+ELHLYTMGNKLYATEMAKVLDPTG LFAGRVISR
Sbjct: 972 MNMWTKLRPGIWNFLQKASNLFELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDG 1031
Query: 1351 XXXXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL 1172
+RVPKSKDLDGVLGMESAVVIIDDSVRVWPHN+ NLIVVERYTYFPCSRRQFGL
Sbjct: 1032 DPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNRHNLIVVERYTYFPCSRRQFGL 1091
Query: 1171 LGPSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCK 992
GPSLLEID DERPEDG+LASSLAVIERIH NFFSH +LN+ DVR+ILA+EQR+IL GC+
Sbjct: 1092 PGPSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHPNLNEADVRSILASEQRRILTGCR 1151
Query: 991 IVFSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRF 812
IVFSR+FPVG+A+P LHPLW TAEQFGAVCTN +D+ VTH+VANS GTDKVNWALS G+F
Sbjct: 1152 IVFSRVFPVGDASPHLHPLWQTAEQFGAVCTNLVDDRVTHIVANSPGTDKVNWALSKGKF 1211
Query: 811 VVQPGWVEASALLYRRANEHDF 746
VV PGWVEASALLYRRANEHDF
Sbjct: 1212 VVHPGWVEASALLYRRANEHDF 1233
Score = 225 bits (574), Expect(2) = 0.0
Identities = 192/578 (33%), Positives = 276/578 (47%), Gaps = 39/578 (6%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSETR----VPVINALVQQAFMGIQTVHSVVSSERSKDVE 3705
+SFE CARL FENLKP+F E + ++ L+QQAF+GI T+ +V + E
Sbjct: 217 RSFEGACARLHTCFENLKPLFQELENGSPMAILEPLMQQAFIGIDTLTTVANLYNLPRRE 276
Query: 3704 QNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLDKDQGLHAGNGGVTNSSASIA 3525
QNK L+LL HIKN+Y +L PEQ E+D+ VR LVF +KD T++ A
Sbjct: 277 QNKTTLLKLLFHIKNRYSDMLTPEQREEMDSRVRKLVFGEKDNVSDPSTSCGTSAINVSA 336
Query: 3524 GKPDVSSHGLASLEKPQTHSGVFN--ANLEPIRTPRIKAEFSPLLDLHAAYDESSLPSPT 3351
VS+ G E SG N ++L + P + SPLL+LHA YDE+SLPSPT
Sbjct: 337 PSGQVSNTGGLPFE-----SGAANLFSSLPRLEVPAKRN--SPLLNLHADYDENSLPSPT 389
Query: 3350 RENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTS 3171
R+N+ P P +PIG + + +E ++L+P + DPLKAVSSYQQKYGQ S
Sbjct: 390 RDNAPPFPALKPIGFGAFPMVPEKLSFLDRVEPTKNSLYPPLNDPLKAVSSYQQKYGQKS 449
Query: 3170 VFSCNQLPSPTPS-EESNEGDKN-DLNGEVSSYSA-------TLNARPLNPPNSSQPGSN 3018
V+ + LPSPTPS +E DK D+ +VSS+ + + P + P S+ S+
Sbjct: 450 VYPSDDLPSPTPSGDEGKPADKGGDIFSDVSSFPVPKSIVLPSTSQMPASQP-STVSSSS 508
Query: 3017 AMFAHSVSEHHKPSVNTAGSLG----------------SLSKP--VTKATAKSRDPRLRL 2892
+A S S+ T S G S + P KA +KSRDPRLR
Sbjct: 509 ISYASSTSQMAASQPITVSSSGISYASGPPGFAKQIEQSTAGPNHAIKAASKSRDPRLRF 568
Query: 2891 TSTEASGAPNSNRKLMPVESNAAKNGPLGEI-MNTRKNKASHELVLDEHSYKKQRNNNAG 2715
+ +++GA + N + + K+G LG + + RK KA + +D+++ K+ R A
Sbjct: 569 LNRDSAGATDVNWR---ANFSELKDGNLGGVSVGNRKQKAVDDPQVDDNALKRFRGGIAN 625
Query: 2714 PRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNST 2535
R+M + N N ++ P + +N
Sbjct: 626 QRDM----------------------QPTGNPNQLMNIRAPTHSS----------SINMK 653
Query: 2534 TNASNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLLQQSLAAETQQKILDPTH--FA 2361
T + SA A L L + AVNP +L+ L+Q E Q+K + +
Sbjct: 654 TLQPPQTTAPHVSAAPAVPLPPMLLKDIAVNPALLMHLIQM----EHQKKSASESQGGMS 709
Query: 2360 SG---SRLPGKVPTLNNASMKSSEVNQKPAGRPQSPAQ 2256
SG + + G V T NA K +E Q P+ RPQ P Q
Sbjct: 710 SGMTNNGIAGMVFTPGNAP-KITEAAQVPSVRPQVPVQ 746
>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 1195
Score = 631 bits (1627), Expect(2) = 0.0
Identities = 329/502 (65%), Positives = 372/502 (74%), Gaps = 3/502 (0%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
+D+G+IRMKPRDPRR+LHNN +Q++ + SE + TN T + KDN + + +
Sbjct: 702 DDLGKIRMKPRDPRRVLHNNALQRNGSMGSEHLKTNLTSIPINQETKDNQNLQKQEGQVE 761
Query: 2053 LTGLP-QPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINKVDMMP 1877
+P Q +LPD + FT NL N+ DI+S S STS P++ N P M
Sbjct: 762 KKPVPLQSLALPDISMPFTKNLKNIADIVSVSH-ASTSQPLVPQNPASQP--------MR 812
Query: 1876 ATAETSNQ--KSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXX 1703
T +S+Q S P ++ ++ N WGD++HL GY+DQQKAA
Sbjct: 813 TTISSSDQFLGIGSAPGAAAAAAAGPRTQNAWGDVEHLFEGYNDQQKAAIQRERARRIEE 872
Query: 1702 QNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGM 1523
Q K+F+ARK LNSAKF EVD VHDEILRKKEE DREK RHLFR HMGM
Sbjct: 873 QKKLFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKAHRHLFRFPHMGM 932
Query: 1522 WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXX 1343
WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTG LF GRVISR
Sbjct: 933 WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGDDGEPF 992
Query: 1342 XXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGP 1163
+R+PKSKDL+GVLGMES VVI+DDSVRVWPHNKLNLIVVERY YFPCSRRQFGL GP
Sbjct: 993 DGDERIPKSKDLEGVLGMESGVVIMDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGP 1052
Query: 1162 SLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVF 983
SLLEIDHDERPEDG+LA SLAVIERIHQNFF+H SL++ DVRNILA+EQRKIL GC+IVF
Sbjct: 1053 SLLEIDHDERPEDGTLACSLAVIERIHQNFFTHPSLDEADVRNILASEQRKILAGCRIVF 1112
Query: 982 SRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQ 803
SR+FPVGEANP LHPLW TAEQFGAVCTNQIDE VTHVVANSLGTDKVNWALSTGRFVV
Sbjct: 1113 SRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVY 1172
Query: 802 PGWVEASALLYRRANEHDFLVK 737
PGWVEASALLYRRANE DF +K
Sbjct: 1173 PGWVEASALLYRRANEQDFAIK 1194
Score = 201 bits (512), Expect(2) = 0.0
Identities = 152/448 (33%), Positives = 220/448 (49%), Gaps = 30/448 (6%)
Frame = -3
Query: 3509 SSHGLASLEKPQTHSGVFNANLEPIRTPRI-------KAEFSPLLDLHAAYDESSLPSPT 3351
S H ++++ K T S V N I P+ +A PLLDLH +D SLPSPT
Sbjct: 272 SGHDMSAVNKLPTDSFVNNKANLSIEGPKTGVSSFKSRAALLPLLDLHKDHDADSLPSPT 331
Query: 3350 RENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTS 3171
RE++LPLP + M ++ S +HPY TD LKAVSSYQQK+ ++S
Sbjct: 332 RESALPLPAYRVL------------TPKMVLDTGNSRMHPYETDALKAVSSYQQKFSKSS 379
Query: 3170 VFSCNQLPSPTPSEESNEGDKNDLNGEVSSYSATLNARPLNPPNSSQPGSNAMFAHSVSE 2991
++LPSPTPSEES GD D GEVSS + + RP NP S Q ++
Sbjct: 380 FALTDRLPSPTPSEESGNGD-GDTGGEVSSSLSVSSFRPANPLTSGQSNASISLPRMDGS 438
Query: 2990 HHKPSVNTAGSLGSLSKP--VTKATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNAAKN 2817
++ ++ + S P KA+AKSRDPRLR +++ S A + N + +PV N K
Sbjct: 439 SLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSD-SNALDQNHRAVPV-VNTLKV 496
Query: 2816 GPLGEIMNTRKNKASHELVLDEHSYKKQRN---NNAGPRNMPVVPGRGGWLEDGSFVTHQ 2646
P+G MN ++ K + + D HS K+Q+N N+ R++ + G GGWLED V Q
Sbjct: 497 EPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDVKTMVGSGGWLEDTDMVGPQ 556
Query: 2645 QSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTTNASNSGLVQNSSAI-------- 2490
+K+ N + D + G + ++S + + +++
Sbjct: 557 TMNKNQLVDNAESDPRRKDGGGV----CTSSSCISSVNISGTEQIPVTGTSVPIGGELVP 612
Query: 2489 --NAAALLKDLKDNTAVNPTMLIQLL----QQSLAAETQQKILDP----THFASGSRLPG 2340
+ A + DL N AVNPTMLI +L QQ LA E QQK +DP T+ + + + G
Sbjct: 613 VKGSTAAIPDLLKNIAVNPTMLINILKMGQQQRLALEAQQKPVDPAKSTTYPLNSNSMLG 672
Query: 2339 KVPTLNNASMKSSEVNQKPAGRPQSPAQ 2256
VP + A S + +PAG Q Q
Sbjct: 673 TVPVVGAA---HSGILPRPAGTVQVSPQ 697
>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
notabilis]
Length = 1301
Score = 602 bits (1551), Expect(2) = 0.0
Identities = 311/482 (64%), Positives = 359/482 (74%), Gaps = 2/482 (0%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
+++G+IRMKPRDPRR+LH NM+QKS + EQ + + +KDNL A
Sbjct: 784 DELGKIRMKPRDPRRVLHGNMLQKSWSLGHEQFKPIVSSVSCTPGNKDNLNGPVQEGQAD 843
Query: 2053 LTGLP-QPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQS-NSQLIPNKINKVDMM 1880
+P Q PD AR+FT NL N+ D+MS SQ +++ A V Q+ +SQ +P K ++ D+
Sbjct: 844 KKQVPSQLVVQPDIARQFTKNLRNIADLMSVSQASTSPATVSQNLSSQPLPVKPDRGDVK 903
Query: 1879 PATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQ 1700
+ +Q S + + E + S++PN WGD++HL GYDD+QKAA Q
Sbjct: 904 AVVPNSEDQHSGTNSTPETTLAVPSRTPNAWGDVEHLFEGYDDEQKAAIQRERARRLEEQ 963
Query: 1699 NKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMW 1520
KMF A K LNSAKF EVD VHDEILRKKEE DREKPQRHLFR HMGMW
Sbjct: 964 KKMFDAHKLCLVLDLDHTLLNSAKFVEVDSVHDEILRKKEEQDREKPQRHLFRFPHMGMW 1023
Query: 1519 TKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXX 1340
TKLRPG+WNFLEKASKLYELHLYTMGNKLYATEMAKVLDP G LF+GRVISR
Sbjct: 1024 TKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPMGTLFSGRVISRGDDGDPFD 1083
Query: 1339 XXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPS 1160
+RVPKSKDL+GVLGMES+VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL GPS
Sbjct: 1084 GDERVPKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPS 1143
Query: 1159 LLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVFS 980
LLEIDHDERPE G+LASSLAVIE+IHQNFFSH SL++VDVRNILA+EQRKIL GC+IVFS
Sbjct: 1144 LLEIDHDERPEQGTLASSLAVIEKIHQNFFSHHSLDEVDVRNILASEQRKILAGCRIVFS 1203
Query: 979 RIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQP 800
R+FPV E NP LHPLW TAEQFGAVCT QID+ VTHVVANS GTDKVNWAL+ G+F V P
Sbjct: 1204 RVFPVSEVNPHLHPLWQTAEQFGAVCTTQIDDQVTHVVANSPGTDKVNWALANGKFAVHP 1263
Query: 799 GW 794
GW
Sbjct: 1264 GW 1265
Score = 225 bits (573), Expect(2) = 0.0
Identities = 200/608 (32%), Positives = 293/608 (48%), Gaps = 44/608 (7%)
Frame = -3
Query: 3938 DFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMFSETRV--PVINALVQQA 3765
+ +++V LI EKSFEEVC+RL+++ E+L+ + SE P + ++Q +
Sbjct: 199 ELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLESLRGVLSEKEFSFPTKDVVIQMS 258
Query: 3764 FMGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFL- 3588
IQ V+SV S EQ K RL +KN L PEQ EI+ M+ SL L
Sbjct: 259 ITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGTPLFSPEQTKEIELMISSLNPLN 318
Query: 3587 --------DKD------QGLHAGNGGVTNSSASIAGKPDVSSHGLASLEKPQTH-SGVFN 3453
DK+ + LH + +TN++A A S S++ PQ + V +
Sbjct: 319 VLPSSGASDKEKETQIIERLHEMDSNLTNANAENA------SIERTSVKLPQDCVASVVH 372
Query: 3452 ANLEPIRTPRI----------KAEFSPLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVV 3303
+N PI P + + PLLDLH +D SLPSPTRE P+ +P+GV
Sbjct: 373 SN--PITLPELLRPGTLAFKGRGLLLPLLDLHKDHDADSLPSPTREAPSCFPVYKPLGVA 430
Query: 3302 TGAAISTQPLTHMNIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPSEES 3123
G + A S LH Y TD LKAVS+YQQK+G+ S ++LPSPTPSEE
Sbjct: 431 DGIIKPVSTTAKVAPGAEESRLHRYETDALKAVSTYQQKFGRGSFLMSDRLPSPTPSEEC 490
Query: 3122 NEGDKNDLNGEVSSYSATLNAR-PLNPPNSSQPGSNAMFAHSVSEHHKPSVNTAGSLGSL 2946
+E D D+N EVSS + N R P P ++++ S + + A +GS
Sbjct: 491 DEED--DINQEVSSSLTSGNLRTPAIPILRPSVVTSSVPVSSPTMQGPIAAKNAAPVGSG 548
Query: 2945 SKPVTKATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHE 2766
S KA+A+SRDPRLR +++A GA + N++ + N K P G+ ++RK + E
Sbjct: 549 SNSTMKASARSRDPRLRFANSDA-GALDLNQRPLTAVHNGPKVEP-GDPTSSRKQRIVEE 606
Query: 2765 LVLDEHSYKKQRNNNAGPR-NMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKP- 2592
LD + K+QR+ + ++ G GGWLED Q +K+ N + D K
Sbjct: 607 PNLDGPALKRQRHAFVSAKIDVKTASGVGGWLEDNGTTGPQIMNKNQLVENAEADPRKSI 666
Query: 2591 --KNGEI---GPFYAEKKQDVNSTTNASNSGLVQNSSAINAAALLKDLKDNTAVNPTMLI 2427
NG I GP +++ V T S+ A+LKD+ AVNPT+ +
Sbjct: 667 HLVNGPIMNNGPNIGKEQVPVTGT-----------STPDALPAILKDI----AVNPTIFM 711
Query: 2426 QLL-----QQSLAAETQQK---ILDPTHFASGSRLPGKVPTLNNASMKSSEVNQKPAGRP 2271
+L QQ LAA+ QQK + TH + + G P +N A K+S + Q PA
Sbjct: 712 DILNKLGQQQLLAADAQQKSDSSKNTTHPPGTNSILGAAPLVNVAPSKASGILQTPAVSL 771
Query: 2270 QSPAQPAS 2247
+ +Q A+
Sbjct: 772 PTTSQVAT 779
>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Fragaria vesca subsp. vesca]
Length = 1230
Score = 616 bits (1588), Expect(2) = 0.0
Identities = 327/503 (65%), Positives = 374/503 (74%), Gaps = 4/503 (0%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQI-NTNGTLSLDSHNDKD--NLKVHEHGE 2063
++ G+IRMK RDPRR+LH N +Q S + EQ N LS N+ D K +
Sbjct: 732 DEAGKIRMKLRDPRRLLHGNALQNSGSVGHEQSRNIVPPLSSSQANNDDMNGKKQDSQAD 791
Query: 2062 LAQLTGLPQPASLPDTARKFTNNLNNLPDIMSSSQL-TSTSAPVLQSNSQLIPNKINKVD 1886
+T PD A +FT NL N+ DI+S SQ+ TS + P +++LI + VD
Sbjct: 792 NNSVTSQSGALGAPDIASQFTKNLKNIADIISVSQVSTSPATPSQNLSTELISINPDNVD 851
Query: 1885 MMPATAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXX 1706
+ A + + SAS P+ + AS+SP WGD++HL GYDD+QKAA
Sbjct: 852 LK-AEEQHTGSISASVPTA----AGASRSPATWGDVEHLFEGYDDKQKAAIQRERARRIE 906
Query: 1705 XQNKMFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMG 1526
Q KMFAA K LNSAKF EVD VHDEILRKKEE DR++PQRHLFR HMG
Sbjct: 907 EQKKMFAAHKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDRKEPQRHLFRFQHMG 966
Query: 1525 MWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXX 1346
MWTKLRPG+W FLEKAS L+E+HLYTMGNKLYATEMAKVLDPTGALFAGRVISR
Sbjct: 967 MWTKLRPGVWKFLEKASHLFEMHLYTMGNKLYATEMAKVLDPTGALFAGRVISRGDDGDP 1026
Query: 1345 XXXXDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLG 1166
+RVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLG
Sbjct: 1027 YDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLG 1086
Query: 1165 PSLLEIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIV 986
PSLLEIDHDER EDG+LASSLAVIE+IHQ FFSH SL++ DVRNILA+EQ+KILGGC+IV
Sbjct: 1087 PSLLEIDHDERHEDGTLASSLAVIEKIHQIFFSHPSLDEADVRNILASEQQKILGGCRIV 1146
Query: 985 FSRIFPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVV 806
FSR+FPVGE NP LHPLW TAEQFGAVCTNQID+ VTHVVANSLGTDKVNWALS+G++VV
Sbjct: 1147 FSRVFPVGEVNPHLHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKYVV 1206
Query: 805 QPGWVEASALLYRRANEHDFLVK 737
PGWVEASALLYRRANE DF +K
Sbjct: 1207 HPGWVEASALLYRRANEQDFAIK 1229
Score = 205 bits (521), Expect(2) = 0.0
Identities = 186/577 (32%), Positives = 271/577 (46%), Gaps = 31/577 (5%)
Frame = -3
Query: 3941 GDFDRQVSLIXXXXXXXXXXXXEKSFEEVCARLRKSFENLKPMFSETRVPVINALVQQAF 3762
G ++++V+L+ EKSF +VC R S E+L+ + SE V ALVQQ F
Sbjct: 160 GVWEKRVNLLREALESLTITEAEKSFGDVCHRFLDSLESLRGVLSEINVSTKEALVQQLF 219
Query: 3761 MGIQTVHSVVSSERSKDVEQNKNLFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLD- 3585
++ + SV S + EQNK++ R+L K+ + EQL EI+ M S+
Sbjct: 220 NAVRAISSVFRSMSADQKEQNKDVLSRILSSAKSD-PSPFPAEQLKEIEVMSSSMDSPQT 278
Query: 3584 ----KDQGLHAGNGGV-TNSSASIAGKPDVSSHGLASLEKPQTHSGVFNANLEPIRTPRI 3420
K+ G+ NG T+S S A V ++ + Q N N+ PR
Sbjct: 279 KAGTKENGIQCINGVYKTDSDTSGANASHVFTYAANTGSDTQVSVVHSNPNISS-EVPRS 337
Query: 3419 -------KAEFSPLLDLHAAYDESSLPSPTRENSLPLPIQEPIGVVTG-AAISTQPLTHM 3264
+ PLLDLH +DE SLPSPTRE P Q+P+ V G S
Sbjct: 338 GSSSFKGRGLMLPLLDLHMDHDEDSLPSPTREPPACFPAQKPVVVENGMVKKSGWETARA 397
Query: 3263 NIEAVVSTLHPYVTDPLKAVSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEVS 3084
++ S +H Y T+ LKAVSSYQQK+ + S F ++LPSPTPSEE + + GEVS
Sbjct: 398 ALDVEGSKMHVYETEALKAVSSYQQKFSRNS-FLTSELPSPTPSEEEGDNGDDAAVGEVS 456
Query: 3083 SYSATLNARPLNPPNSSQ-----------PGSNAMFAHSVSEHHKPSVNTAGSLGSLSKP 2937
S SA+ N R PP S + PGS+ M H + TA + S
Sbjct: 457 SSSASNNVRTPQPPVSGRQVVSSVPATTLPGSSGM-------HGLITAKTASPVSLGSNM 509
Query: 2936 VTKATAKSRDPRLRLTSTEASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVL 2757
K++AKSRDPRLR +++A GA N++ NA K + +++RK+K+ +
Sbjct: 510 PNKSSAKSRDPRLRFANSDA-GALTLNQQSSIQVHNAPKVDSV-ITLSSRKHKSPEDSNF 567
Query: 2756 DEHSYKKQRN-NNAGPRNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGE 2580
D K+QR N+ G G WLEDGS V +++ + + D K N
Sbjct: 568 DGPESKRQRGANSVVGWGAKTSFGNGVWLEDGSSVGPHLINRNQTVEKKEADPRKMVNVS 627
Query: 2579 IGPFYAEKKQDVNSTTNASNSGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLL-----Q 2415
P E + +T N + S ++ A+ KD+ AVNPTML+ +L Q
Sbjct: 628 SSPGTVEGNSNGQNTANEKVP--LVAPSLVSLPAIFKDI----AVNPTMLVNILKLAEAQ 681
Query: 2414 QSLAAETQQKILDPTHFASGSRLPGKVPTLNNASMKS 2304
Q+ AA +++ L T+ S S +PG +N+ S S
Sbjct: 682 QNAAAPARKESL--TYPPSSSSIPGTAALVNDPSKTS 716
>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Cucumis sativus]
Length = 1249
Score = 608 bits (1568), Expect(2) = 0.0
Identities = 318/499 (63%), Positives = 359/499 (71%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
+D+G++RMKPRDPRR+LH N +QK + ++Q+ + ++ +D H+
Sbjct: 765 DDLGKVRMKPRDPRRVLHGNSLQKVGSLGNDQLKGVVPTASNTEGSRDIPNGHKQEGQGD 824
Query: 2053 LTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINKVDMMPA 1874
LPD R+FTNNL N+ DIMS S P NS P + +D P
Sbjct: 825 SKLASSQTILPDIGRQFTNNLKNIADIMSVP-----SPPTSSPNSSSKPVGSSSMDSKPV 879
Query: 1873 TAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQNK 1694
T V +++S+S WGD++HL YDD+QKAA Q K
Sbjct: 880 TTAFQ----------AVDMAASSRSQGAWGDLEHLFDSYDDKQKAAIQRERARRIEEQKK 929
Query: 1693 MFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMWTK 1514
MFAARK LNSAKF EVD VHDEILRKKEE DREK QRHLFR HMGMWTK
Sbjct: 930 MFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKAQRHLFRFPHMGMWTK 989
Query: 1513 LRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXXXX 1334
LRPG+WNFLEKAS+LYELHLYTMGNKLYATEMAKVLDP G LFAGRVISR
Sbjct: 990 LRPGVWNFLEKASELYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPLDGD 1049
Query: 1333 DRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLL 1154
DRVPKSKDL+GVLGMES VVIIDDS+RVWPHNK+NLIVVERYTYFPCSRRQFGLLGPSLL
Sbjct: 1050 DRVPKSKDLEGVLGMESGVVIIDDSIRVWPHNKMNLIVVERYTYFPCSRRQFGLLGPSLL 1109
Query: 1153 EIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVFSRI 974
EIDHDERPEDG+LASSL VI+RIHQ+FFS+ L+ VDVR IL+AEQ+KIL GC+IVFSR+
Sbjct: 1110 EIDHDERPEDGTLASSLGVIQRIHQSFFSNPELDQVDVRTILSAEQQKILAGCRIVFSRV 1169
Query: 973 FPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQPGW 794
FPVGEANP LHPLW TAEQFGA CTNQIDE VTHVVANSLGTDKVNWALSTGRFVV PGW
Sbjct: 1170 FPVGEANPHLHPLWQTAEQFGAQCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGW 1229
Query: 793 VEASALLYRRANEHDFLVK 737
VEASALLYRRA E DF +K
Sbjct: 1230 VEASALLYRRATEQDFAIK 1248
Score = 212 bits (540), Expect(2) = 0.0
Identities = 181/579 (31%), Positives = 276/579 (47%), Gaps = 43/579 (7%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSETRVPVINALVQQAFMGIQTVHSVVSSERSKDVEQNKN 3693
KSF+EVC+++ S E + VP +AL+Q+ + ++ ++SV S + E++K
Sbjct: 215 KSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKE 274
Query: 3692 LFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLD---------KDQGLHAGNG----- 3555
RLL ++KN L PEQ+ ++ + S LD K+ +H NG
Sbjct: 275 HLSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMD 334
Query: 3554 ---GVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFNANLEP-IRTPRIKAEFSPLLDLH 3387
T++S+ + ++S + K + + + + L+ + + + + PLLDLH
Sbjct: 335 FYSAYTSTSSQLTPSNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLH 394
Query: 3386 AAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKA 3207
+D SLPSPTRE +Q+ S T M S HPY TD LKA
Sbjct: 395 KDHDADSLPSPTREAPTIFSVQK----------SGNAPTKMAFPVDGSRSHPYETDALKA 444
Query: 3206 VSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEVSSYSATLNARPLNPPNSSQP 3027
VS+YQQK+G++S ++LPSPTPSEE + G D+ GEVSS S R L N S+P
Sbjct: 445 VSTYQQKFGRSSFSMADRLPSPTPSEEHDGG--GDIGGEVSSSSI---IRSLKSSNVSKP 499
Query: 3026 GSNAMFAHSVSEHHKPSVNTAGSL-----------GSLSKPVTKATAKSRDPRLRLTSTE 2880
G + A +VS P+++++ + S+S P K AKSRDPRLR+ +++
Sbjct: 500 GQKSNSASNVSTGLFPNMDSSSTRVLISPLNVAPPSSVSNPTVKPLAKSRDPRLRIVNSD 559
Query: 2879 ASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKKQR----NNNAGP 2712
ASG + R + V+S++ ++ RK K E D K+ R N
Sbjct: 560 ASGMDLNPRTMASVQSSSILES--AATLHLRKQKMDGEPNTDGPEVKRLRIGSQNLAVAA 617
Query: 2711 RNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTT 2532
++ V G GGWLED + L N N EI A +K +V + +
Sbjct: 618 SDVRAVSGSGGWLED-----TMPAGPRLFNRNQM---------EIAEANATEKSNVTNNS 663
Query: 2531 NASN--SGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLL----QQSLAAETQQKILDPT 2370
+ N + V NS+ + +LLKD+ VNPTML+ LL QQ LAAE + K +P
Sbjct: 664 GSGNECTPTVNNSNDASLPSLLKDI----VVNPTMLLNLLKMSQQQQLAAELKLKSSEPE 719
Query: 2369 HFA----SGSRLPGKVPTLNNASMKSSEVNQKPAGRPQS 2265
A S + G P L NA + +S + Q+ AG P +
Sbjct: 720 KNAICPTSLNPCQGSSP-LINAPVATSGILQQSAGTPSA 757
>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Cucumis sativus]
Length = 1249
Score = 607 bits (1566), Expect(2) = 0.0
Identities = 318/499 (63%), Positives = 358/499 (71%)
Frame = -1
Query: 2233 NDVGRIRMKPRDPRRILHNNMIQKSENPVSEQINTNGTLSLDSHNDKDNLKVHEHGELAQ 2054
+D+G++RMKPRDPRR+LH N +QK + ++Q+ + ++ +D H+
Sbjct: 765 DDLGKVRMKPRDPRRVLHGNSLQKVGSLGNDQLKGVVPTASNTEGSRDIPNGHKQEGQGD 824
Query: 2053 LTGLPQPASLPDTARKFTNNLNNLPDIMSSSQLTSTSAPVLQSNSQLIPNKINKVDMMPA 1874
LPD R+FTNNL N+ DIMS S P NS P + +D P
Sbjct: 825 SKLASSQTILPDIGRQFTNNLKNIADIMSVP-----SPPTSSPNSSSKPVGSSSMDSKPV 879
Query: 1873 TAETSNQKSASGPSCEVVPSSASQSPNPWGDMDHLLHGYDDQQKAAXXXXXXXXXXXQNK 1694
T V +++S+S WGD++HL YDD+QKAA Q K
Sbjct: 880 TTAFQ----------AVDMAASSRSQGAWGDLEHLFDSYDDKQKAAIQRERARRIEEQKK 929
Query: 1693 MFAARKXXXXXXXXXXXLNSAKFAEVDQVHDEILRKKEEVDREKPQRHLFRLLHMGMWTK 1514
MFAARK LNSAKF EVD VHDEILRKKEE DREK QRHLFR HMGMWTK
Sbjct: 930 MFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKAQRHLFRFPHMGMWTK 989
Query: 1513 LRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRXXXXXXXXXX 1334
LRPG+WNFLEKAS+LYELHLYTMGNKLYATEMAKVLDP G LFAGRVISR
Sbjct: 990 LRPGVWNFLEKASELYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPLDGD 1049
Query: 1333 DRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLL 1154
DRVPKSKDL+GVLGMES VVIIDDS+RVWPHNK+NLIVVERYTYFPCSRRQFGLLGPSLL
Sbjct: 1050 DRVPKSKDLEGVLGMESGVVIIDDSIRVWPHNKMNLIVVERYTYFPCSRRQFGLLGPSLL 1109
Query: 1153 EIDHDERPEDGSLASSLAVIERIHQNFFSHRSLNDVDVRNILAAEQRKILGGCKIVFSRI 974
EIDHDERPEDG+LASSL VI+RIHQ FFS+ L+ VDVR IL+AEQ+KIL GC+IVFSR+
Sbjct: 1110 EIDHDERPEDGTLASSLGVIQRIHQXFFSNPELDQVDVRTILSAEQQKILAGCRIVFSRV 1169
Query: 973 FPVGEANPQLHPLWVTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGRFVVQPGW 794
FPVGEANP LHPLW TAEQFGA CTNQIDE VTHVVANSLGTDKVNWALSTGRFVV PGW
Sbjct: 1170 FPVGEANPHLHPLWQTAEQFGAQCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGW 1229
Query: 793 VEASALLYRRANEHDFLVK 737
VEASALLYRRA E DF +K
Sbjct: 1230 VEASALLYRRATEQDFAIK 1248
Score = 212 bits (540), Expect(2) = 0.0
Identities = 181/579 (31%), Positives = 276/579 (47%), Gaps = 43/579 (7%)
Frame = -3
Query: 3872 KSFEEVCARLRKSFENLKPMFSETRVPVINALVQQAFMGIQTVHSVVSSERSKDVEQNKN 3693
KSF+EVC+++ S E + VP +AL+Q+ + ++ ++SV S + E++K
Sbjct: 215 KSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKE 274
Query: 3692 LFLRLLIHIKNQYHTLLIPEQLSEIDTMVRSLVFLD---------KDQGLHAGNG----- 3555
RLL ++KN L PEQ+ ++ + S LD K+ +H NG
Sbjct: 275 HLSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMD 334
Query: 3554 ---GVTNSSASIAGKPDVSSHGLASLEKPQTHSGVFNANLEP-IRTPRIKAEFSPLLDLH 3387
T++S+ + ++S + K + + + + L+ + + + + PLLDLH
Sbjct: 335 FYSAYTSTSSQLTPSNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLH 394
Query: 3386 AAYDESSLPSPTRENSLPLPIQEPIGVVTGAAISTQPLTHMNIEAVVSTLHPYVTDPLKA 3207
+D SLPSPTRE +Q+ S T M S HPY TD LKA
Sbjct: 395 KDHDADSLPSPTREAPTIFSVQK----------SGNAPTKMAFPVDGSRSHPYETDALKA 444
Query: 3206 VSSYQQKYGQTSVFSCNQLPSPTPSEESNEGDKNDLNGEVSSYSATLNARPLNPPNSSQP 3027
VS+YQQK+G++S ++LPSPTPSEE + G D+ GEVSS S R L N S+P
Sbjct: 445 VSTYQQKFGRSSFSMADRLPSPTPSEEHDGG--GDIGGEVSSSSI---IRSLKSSNVSKP 499
Query: 3026 GSNAMFAHSVSEHHKPSVNTAGSL-----------GSLSKPVTKATAKSRDPRLRLTSTE 2880
G + A +VS P+++++ + S+S P K AKSRDPRLR+ +++
Sbjct: 500 GQKSNSASNVSTGLFPNMDSSSTRVLISPLNVAPPSSVSNPTVKPLAKSRDPRLRIVNSD 559
Query: 2879 ASGAPNSNRKLMPVESNAAKNGPLGEIMNTRKNKASHELVLDEHSYKKQR----NNNAGP 2712
ASG + R + V+S++ ++ RK K E D K+ R N
Sbjct: 560 ASGMDLNPRTMASVQSSSILES--AATLHLRKQKMDGEPNTDGPEVKRLRIGSQNLAVAA 617
Query: 2711 RNMPVVPGRGGWLEDGSFVTHQQSDKSLSNVNVQLDTSKPKNGEIGPFYAEKKQDVNSTT 2532
++ V G GGWLED + L N N EI A +K +V + +
Sbjct: 618 SDVRAVSGSGGWLED-----TMPAGPRLFNRNQM---------EIAEANATEKSNVTNNS 663
Query: 2531 NASN--SGLVQNSSAINAAALLKDLKDNTAVNPTMLIQLL----QQSLAAETQQKILDPT 2370
+ N + V NS+ + +LLKD+ VNPTML+ LL QQ LAAE + K +P
Sbjct: 664 GSGNECTPTVNNSNDASLPSLLKDI----VVNPTMLLNLLKMSQQQQLAAELKLKSSEPE 719
Query: 2369 HFA----SGSRLPGKVPTLNNASMKSSEVNQKPAGRPQS 2265
A S + G P L NA + +S + Q+ AG P +
Sbjct: 720 KNAICPTSLNPCQGSSP-LINAPVATSGILQQSAGTPSA 757