BLASTX nr result
ID: Stemona21_contig00010645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00010645
(989 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II a... 284 4e-74
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 282 2e-73
ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group] g... 281 4e-73
gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus pe... 280 5e-73
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 280 6e-73
ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases I, I... 280 6e-73
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 280 8e-73
ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea ma... 279 1e-72
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I... 279 1e-72
gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japo... 278 2e-72
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 278 3e-72
gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 277 4e-72
gb|EMJ20951.1| hypothetical protein PRUPE_ppa024345mg [Prunus pe... 276 9e-72
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I... 274 3e-71
dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgar... 274 4e-71
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 273 1e-70
ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, I... 272 2e-70
gb|AFK38034.1| unknown [Lotus japonicus] 271 3e-70
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 271 4e-70
ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases I, I... 270 6e-70
>ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Oryza brachyantha]
Length = 210
Score = 284 bits (726), Expect = 4e-74
Identities = 138/205 (67%), Positives = 171/205 (83%)
Frame = -1
Query: 911 TAEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKK 732
T E GRL RIRRT +QMLRDR YLV+ E E+ + + FL KFGE F REDL I+K KK
Sbjct: 7 TEEAMVGRLVRIRRTVMQMLRDRGYLVV-EHELAMGRRDFLRKFGESFHREDLLINKYKK 65
Query: 731 DDPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKY 552
+DPSDQIYVFFP++ KVG++ I+K++E MK +NV RA+LV +QN+TP A++F+Q K
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125
Query: 551 QMEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGL 372
+E+FQEAELL+NIK+H L+PEH+VLT EEK+TLL RYTLKETQLPR+Q+TDPIA+YYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLIPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 371 RRGQVVKIIRPSETAGRYITYRYVI 297
RRGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 282 bits (721), Expect = 2e-73
Identities = 139/203 (68%), Positives = 171/203 (84%)
Frame = -1
Query: 908 AEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKD 729
+EDE RLFRIRRT +QMLRDRNYLV + E+N+TK QF K+GE REDL I+K++++
Sbjct: 4 SEDEITRLFRIRRTVMQMLRDRNYLV-GDFELNMTKEQFRNKYGENMKREDLIINKSRRN 62
Query: 728 DPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQ 549
D DQIYVFFP E KVG++ ++ +I RMK++NV RA+LV +QN+TP A+T I + K+
Sbjct: 63 DSPDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFH 122
Query: 548 MEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLR 369
+EVFQEAELLVNIK+H LVPEH+VLT EEK+TLL RYT+KETQLPR+QVTDPIA+YYGL+
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLK 182
Query: 368 RGQVVKIIRPSETAGRYITYRYV 300
RGQVVKIIRPSETAGRYITYRYV
Sbjct: 183 RGQVVKIIRPSETAGRYITYRYV 205
>ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group]
gi|55296830|dbj|BAD68174.1| putative DNA-directed RNA
polymerase II 23K chain [Oryza sativa Japonica Group]
gi|113534095|dbj|BAF06478.1| Os01g0805800 [Oryza sativa
Japonica Group] gi|215737136|dbj|BAG96065.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215765546|dbj|BAG87243.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218189238|gb|EEC71665.1| hypothetical protein
OsI_04128 [Oryza sativa Indica Group]
Length = 210
Score = 281 bits (718), Expect = 4e-73
Identities = 137/205 (66%), Positives = 170/205 (82%)
Frame = -1
Query: 911 TAEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKK 732
T E GRL RIRRT +QMLRDR YLV+ E E+ + + FL K+GE F REDL I+K KK
Sbjct: 7 TEEVMVGRLVRIRRTVMQMLRDRGYLVV-EHELAMGRRDFLRKYGESFHREDLLINKYKK 65
Query: 731 DDPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKY 552
+DPSDQIYVFFP++ KVG++ I+K++E MK +NV RA+LV +QN+TP A++F+Q K
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125
Query: 551 QMEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGL 372
+E+FQEAELL+NIK+H LVPEH+VL EEK+TLL RYTLKETQLPR+Q+TDPIA+YYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 371 RRGQVVKIIRPSETAGRYITYRYVI 297
RRGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210
>gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 280 bits (717), Expect = 5e-73
Identities = 139/203 (68%), Positives = 169/203 (83%)
Frame = -1
Query: 905 EDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDD 726
E+E RL+R+R+T +QML+DRNYLV + EIN+T+ QF K+GE REDLTI+K K+ D
Sbjct: 5 EEEITRLYRVRKTVMQMLKDRNYLV-GDFEINMTREQFKSKYGENMKREDLTINKTKRSD 63
Query: 725 PSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQM 546
SDQIYVFFP E KVG++ ++ + RMK++NV RA+LV +QN+TP AKT I + K+ +
Sbjct: 64 SSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHL 123
Query: 545 EVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRR 366
EVFQEAELLVNIK+H LVPEH VLT EEK+TLL RYT+KETQLPR+QVTDPIAKYYGL+R
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKR 183
Query: 365 GQVVKIIRPSETAGRYITYRYVI 297
GQVVKIIRPSETAGRYITYRYVI
Sbjct: 184 GQVVKIIRPSETAGRYITYRYVI 206
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 280 bits (716), Expect = 6e-73
Identities = 133/203 (65%), Positives = 174/203 (85%)
Frame = -1
Query: 905 EDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDD 726
+D++ +LFRIRRT +QMLRDR YLV + EIN+TKAQF+EKFG+ ++DL I+K +++
Sbjct: 5 DDQTSKLFRIRRTLMQMLRDRGYLV-GDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNN 63
Query: 725 PSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQM 546
PS+QIYVFFP E KVG++ ++ + ERMK++NV RAILV +QN+TP A+ +Q + K+ +
Sbjct: 64 PSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHL 123
Query: 545 EVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRR 366
E+FQE+ELLVNIK+H LVPEH+VLT EEK+TLL RYTLKETQLPR+Q+TDPIA+YYGL+R
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 365 GQVVKIIRPSETAGRYITYRYVI 297
GQVVKIIRPSETAGRY+TYRYV+
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Setaria italica]
Length = 210
Score = 280 bits (716), Expect = 6e-73
Identities = 137/205 (66%), Positives = 170/205 (82%)
Frame = -1
Query: 911 TAEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKK 732
T E GRL+RIRRT +QMLRDR YLV+ E E+ ++ FL KFGE F REDL I+K KK
Sbjct: 7 TDEVTMGRLYRIRRTVMQMLRDRGYLVV-EHELATSRRDFLRKFGESFHREDLLINKYKK 65
Query: 731 DDPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKY 552
+DPSDQIYVFFP++ KVG++ I+K++E M +NV RA+LV +QN+TP AK+F+ K
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKI 125
Query: 551 QMEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGL 372
+E+FQEAELL+NIK+H LVPEH+VLT EEK+TLL RYTLKETQLPR+Q+TDPIA+YYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 371 RRGQVVKIIRPSETAGRYITYRYVI 297
+RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 186 KRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 280 bits (715), Expect = 8e-73
Identities = 138/204 (67%), Positives = 171/204 (83%)
Frame = -1
Query: 908 AEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKD 729
+++E RLFRIRRT +QMLRDR Y V + EIN++K QF+ KFGE REDL I+KA ++
Sbjct: 4 SDEEIKRLFRIRRTVMQMLRDRGYFV-GDFEINMSKEQFIAKFGENMKREDLVINKALRN 62
Query: 728 DPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQ 549
D SDQIYVFFP E KVG++ ++ + RMK++NV RAILV +QN+TP A+T IQ + K+
Sbjct: 63 DSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFH 122
Query: 548 MEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLR 369
+EVFQEAELLVNIK+H LVPEH+VLT EEK+TLL RYT+KETQLPR+QVTDPIA+YYGL+
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLK 182
Query: 368 RGQVVKIIRPSETAGRYITYRYVI 297
RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 183 RGQVVKIIRPSETAGRYVTYRYVV 206
>ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea mays]
gi|226533456|ref|NP_001152590.1| DNA-directed RNA
polymerases II 24 kDa polypeptide [Zea mays]
gi|194703030|gb|ACF85599.1| unknown [Zea mays]
gi|195657875|gb|ACG48405.1| DNA-directed RNA polymerases
II 24 kDa polypeptide [Zea mays]
gi|413952167|gb|AFW84816.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 210
Score = 279 bits (714), Expect = 1e-72
Identities = 136/205 (66%), Positives = 169/205 (82%)
Frame = -1
Query: 911 TAEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKK 732
T E GRL+RIRRT +QMLRDR YLV+ E+ ++ FL KFGE F REDL I+K KK
Sbjct: 7 TDEATVGRLYRIRRTVMQMLRDRGYLVVDH-ELATSRRDFLRKFGESFHREDLLINKYKK 65
Query: 731 DDPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKY 552
+DPSDQIYVFFP++ KVG++ I+K++E M +NV RA+LV +QN+TP AK+F+ K
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKI 125
Query: 551 QMEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGL 372
+E+FQEAE+L+NIK+H LVPEH+VLT EEK+TLL RYTLKETQLPR+Q+TDPIA+YYGL
Sbjct: 126 HLEIFQEAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 371 RRGQVVKIIRPSETAGRYITYRYVI 297
RRGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 279 bits (713), Expect = 1e-72
Identities = 135/203 (66%), Positives = 171/203 (84%)
Frame = -1
Query: 905 EDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDD 726
E+E RL+RIR+T ++MLRDRNYLV + EIN++K QF EK+GE REDL I+K KKD
Sbjct: 5 EEEITRLYRIRKTVMEMLRDRNYLV-GDFEINMSKHQFKEKYGENMKREDLVINKTKKDK 63
Query: 725 PSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQM 546
PSDQIYVFFP EVKVG++ ++ +I RM ++NV RAILV + ++TP A+T + + K+ +
Sbjct: 64 PSDQIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSVAEISSKFHL 123
Query: 545 EVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRR 366
EVFQEAELLVNIKDH LVPEH+VLT+ EK+TLL RYT+KETQLPR+QVTDP+A+YYGL+R
Sbjct: 124 EVFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
Query: 365 GQVVKIIRPSETAGRYITYRYVI 297
GQVVKIIRPSETAGRY+TYR+V+
Sbjct: 184 GQVVKIIRPSETAGRYVTYRFVV 206
>gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japonica Group]
Length = 210
Score = 278 bits (711), Expect = 2e-72
Identities = 136/205 (66%), Positives = 169/205 (82%)
Frame = -1
Query: 911 TAEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKK 732
T E GRL RIRRT +QMLRDR YLV+ E E+ + + FL K+GE F REDL I+K KK
Sbjct: 7 TEEVMVGRLVRIRRTVMQMLRDRGYLVV-EHELAMGRRDFLRKYGESFHREDLLINKYKK 65
Query: 731 DDPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKY 552
+DPSDQIYVFFP++ KVG++ I+K++E MK +NV RA+LV +QN+TP A++F+Q K
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125
Query: 551 QMEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGL 372
+E+FQEAELL+NIK+H LVPEH+VL EK+TLL RYTLKETQLPR+Q+TDPIA+YYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLNNGEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 371 RRGQVVKIIRPSETAGRYITYRYVI 297
RRGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 278 bits (710), Expect = 3e-72
Identities = 137/204 (67%), Positives = 170/204 (83%)
Frame = -1
Query: 908 AEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKD 729
+E+E RLFRIR+T +QML+DR Y V + EIN+TK QF+ KFGE REDL I+KAK+
Sbjct: 4 SEEEISRLFRIRKTVMQMLKDRGYFV-GDFEINMTKHQFVSKFGENMKREDLVINKAKRT 62
Query: 728 DPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQ 549
D SDQIYVFFP E KVG++ ++ + RMK++NV RAILV +QN+TP A+T I + K+
Sbjct: 63 DSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFH 122
Query: 548 MEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLR 369
+EVFQEAELLVNIK+H LVPEH+VLT EEK+TLL RYT+KETQLPR+QV+DPIA+Y+GL+
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLK 182
Query: 368 RGQVVKIIRPSETAGRYITYRYVI 297
RGQVVKIIRPSETAGRYITYRYV+
Sbjct: 183 RGQVVKIIRPSETAGRYITYRYVV 206
>gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 277 bits (709), Expect = 4e-72
Identities = 132/204 (64%), Positives = 171/204 (83%)
Frame = -1
Query: 908 AEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKD 729
++DE RLFRIR+T +QML+DR Y V + EI +TKAQF+ K+GE REDL I+K K++
Sbjct: 4 SDDEIKRLFRIRKTVMQMLKDRGYFV-GDFEITMTKAQFISKYGENMKREDLVINKTKRN 62
Query: 728 DPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQ 549
D SDQIYVFFP E KVG++ ++ + RMK++NV RA+LV +QN+TP A+T I + K+
Sbjct: 63 DNSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFH 122
Query: 548 MEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLR 369
+EVFQE+ELLVN+K+H+LVPEH+VLT EEK+TLL RYT+KETQLPR+QV+DPIA+YYGL+
Sbjct: 123 LEVFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLK 182
Query: 368 RGQVVKIIRPSETAGRYITYRYVI 297
RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 183 RGQVVKIIRPSETAGRYVTYRYVV 206
>gb|EMJ20951.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
Length = 206
Score = 276 bits (706), Expect = 9e-72
Identities = 133/203 (65%), Positives = 168/203 (82%)
Frame = -1
Query: 905 EDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDD 726
E+E RL+R+RRT +QMLRDR YLV + EIN+T+ QF K+GE REDLTI+K K++D
Sbjct: 5 EEEITRLYRVRRTVMQMLRDRKYLV-GDFEINMTREQFKAKYGENMKREDLTINKTKRND 63
Query: 725 PSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQM 546
+DQ+YVFFP E KVG++ I+ + RMK+DNV RAILV +QNMTP A+T I + K+ M
Sbjct: 64 STDQLYVFFPEEPKVGVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEISSKFHM 123
Query: 545 EVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRR 366
EVFQE EL+VN+ +H LVPEH++LT EEK+TLL RYT+KETQLPR+Q+TDP+AKYYGL+R
Sbjct: 124 EVFQEPELMVNVTEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQLTDPVAKYYGLKR 183
Query: 365 GQVVKIIRPSETAGRYITYRYVI 297
GQV+KIIRPSETAGRYITYRYV+
Sbjct: 184 GQVMKIIRPSETAGRYITYRYVV 206
>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 274 bits (701), Expect = 3e-71
Identities = 133/203 (65%), Positives = 169/203 (83%)
Frame = -1
Query: 905 EDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDD 726
E+E RL+RIR+T + MLRDRNYLV + E+N++K +F EK+GE REDL I+K KKD
Sbjct: 5 EEEITRLYRIRKTVMVMLRDRNYLV-GDFEVNMSKHEFKEKYGENMKREDLVINKTKKDK 63
Query: 725 PSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQM 546
PSDQIYVFFP EVKVG++ ++ + RM ++NV RAILV + ++TP A+T I + K+ +
Sbjct: 64 PSDQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCIAEVSSKFHL 123
Query: 545 EVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRR 366
EVFQEAELLVNIK+H LVPEH+VLTE EK+TLL RYT+KETQLPR+QVTDP+A+YYGL+R
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLTETEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
Query: 365 GQVVKIIRPSETAGRYITYRYVI 297
GQVVKIIRPSETAGRY+TYR+V+
Sbjct: 184 GQVVKIIRPSETAGRYVTYRFVV 206
>dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504136|dbj|BAK02854.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511589|dbj|BAJ91939.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 274 bits (700), Expect = 4e-71
Identities = 130/199 (65%), Positives = 166/199 (83%)
Frame = -1
Query: 893 GRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDDPSDQ 714
GRL RIRRT + MLRDR YLV+ E E+++T+ F K+GE F RED+ I+K KK+DP+DQ
Sbjct: 13 GRLVRIRRTVMHMLRDRGYLVV-EHELSMTRRDFQRKYGETFHREDMLINKCKKNDPNDQ 71
Query: 713 IYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQMEVFQ 534
IYVFFP++ KVG++ I+K++E M + V RAILV +QN+TP AK+F+Q K +EVFQ
Sbjct: 72 IYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAILVVQQNLTPFAKSFLQELEPKIHLEVFQ 131
Query: 533 EAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRRGQVV 354
+AE+L+NIK+H LVPEH+VL EEK+TLL RYTLKETQLPR+Q+TDPIA+YYGL+RGQVV
Sbjct: 132 DAEMLINIKEHVLVPEHQVLANEEKKTLLARYTLKETQLPRIQITDPIARYYGLKRGQVV 191
Query: 353 KIIRPSETAGRYITYRYVI 297
KIIRPSETAGRY+TYRYV+
Sbjct: 192 KIIRPSETAGRYVTYRYVV 210
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 273 bits (697), Expect = 1e-70
Identities = 131/204 (64%), Positives = 170/204 (83%)
Frame = -1
Query: 908 AEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKD 729
+E+E GRL+RIR+T +QMLRDRN+LV + EIN++K +F K+GE REDL I+K+KKD
Sbjct: 4 SEEEIGRLYRIRKTVMQMLRDRNFLV-GDFEINMSKHEFKSKYGEHMKREDLVINKSKKD 62
Query: 728 DPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQ 549
+ DQIYVFFP E KVG++ ++ + RM ++NV RAILV + N+TP A+T I + K+
Sbjct: 63 NSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFH 122
Query: 548 MEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLR 369
+EVFQEAELLVNIK+H LVPEH+VLT+ EK+TLL RYT+KETQLPR+QVTDP+A+YYGL+
Sbjct: 123 LEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLK 182
Query: 368 RGQVVKIIRPSETAGRYITYRYVI 297
RGQVVKIIRPSETAGRY+TYR+V+
Sbjct: 183 RGQVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Fragaria vesca subsp. vesca]
Length = 206
Score = 272 bits (695), Expect = 2e-70
Identities = 132/203 (65%), Positives = 167/203 (82%)
Frame = -1
Query: 905 EDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDD 726
E+E RL+R+R+T +QML+DR+YL++ ++N+T +QF K+GE REDLTI++ K+ D
Sbjct: 5 EEEIMRLYRVRKTVMQMLKDRDYLIVDH-DLNMTMSQFKNKYGEHMKREDLTINRRKRGD 63
Query: 725 PSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQM 546
SDQIYVFFP E KVG++ ++ +I RM +NV RAILVA+QN+TP AKT I KY +
Sbjct: 64 ESDQIYVFFPDEPKVGVKTMKSYITRMNQENVIRAILVAQQNLTPFAKTSISEMGSKYHL 123
Query: 545 EVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRR 366
E+FQEAELLVNIK+H LVPEH VLT EEK+TLL RYT+KETQLPR+Q+ DPIA+YYGL+R
Sbjct: 124 EIFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTVKETQLPRIQLIDPIARYYGLKR 183
Query: 365 GQVVKIIRPSETAGRYITYRYVI 297
GQVVKIIRPSETAGRY+TYRYVI
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVI 206
>gb|AFK38034.1| unknown [Lotus japonicus]
Length = 206
Score = 271 bits (693), Expect = 3e-70
Identities = 131/203 (64%), Positives = 168/203 (82%)
Frame = -1
Query: 905 EDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDD 726
E++ +L RIR+T +QMLRDRNYLV + EIN+++ +F K+G+ REDLTI+K KKD
Sbjct: 5 EEDITKLHRIRKTVMQMLRDRNYLV-GDFEINMSRHEFKTKYGDNMKREDLTINKTKKDG 63
Query: 725 PSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQM 546
PSDQIYVFFP E KVG++ ++ + RM ++NV RAILV + N+TP AKT I + K+Q+
Sbjct: 64 PSDQIYVFFPDEPKVGVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSKFQL 123
Query: 545 EVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRR 366
EVFQEAELLVNIK+H LVPEH++L E EK+TLL RYT+KETQLPR+Q+TDP+A+YYGL+R
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYGLKR 183
Query: 365 GQVVKIIRPSETAGRYITYRYVI 297
GQVVKIIRPSETAGRYITYR+V+
Sbjct: 184 GQVVKIIRPSETAGRYITYRFVV 206
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 271 bits (692), Expect = 4e-70
Identities = 130/204 (63%), Positives = 169/204 (82%)
Frame = -1
Query: 908 AEDESGRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKD 729
+E+E GRL+RIR+T +QMLRDR +LV + EIN++K +F K+GE REDL I+K+KKD
Sbjct: 4 SEEEMGRLYRIRKTVMQMLRDRGFLV-GDFEINMSKHEFKSKYGEHMKREDLVINKSKKD 62
Query: 728 DPSDQIYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQ 549
+ DQIYVFFP E KVG++ ++ + RM ++NV RAILV + N+TP A+T I + K+
Sbjct: 63 NSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFH 122
Query: 548 MEVFQEAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLR 369
+EVFQEAELLVNIK+H LVPEH+VLT+ EK+TLL RYT+KETQLPR+QVTDP+A+YYGL+
Sbjct: 123 LEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLK 182
Query: 368 RGQVVKIIRPSETAGRYITYRYVI 297
RGQVVKIIRPSETAGRY+TYR+V+
Sbjct: 183 RGQVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Brachypodium distachyon]
Length = 210
Score = 270 bits (690), Expect = 6e-70
Identities = 128/199 (64%), Positives = 165/199 (82%)
Frame = -1
Query: 893 GRLFRIRRTALQMLRDRNYLVIPEVEINITKAQFLEKFGEGFTREDLTISKAKKDDPSDQ 714
GRL RIR T + MLRDR YLV+ E E+ +T+ F K+GE F REDL I+K KK+DP+DQ
Sbjct: 13 GRLVRIRSTVMHMLRDRGYLVV-EHELAMTRRDFERKYGESFHREDLLINKCKKNDPNDQ 71
Query: 713 IYVFFPSEVKVGIQQIRKFIERMKTDNVKRAILVARQNMTPSAKTFIQAANEKYQMEVFQ 534
IYVFFP++ KVG++ I+K++E M + V RA++V +QN+TP AK+F+Q K +EVFQ
Sbjct: 72 IYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAVVVVQQNLTPFAKSFLQELEPKIHLEVFQ 131
Query: 533 EAELLVNIKDHNLVPEHEVLTEEEKRTLLGRYTLKETQLPRMQVTDPIAKYYGLRRGQVV 354
+AE+L+NIK+H LVPEH+VLT +EK+TLL RYTLKETQLPR+Q+TDPIA+YYGL+RGQVV
Sbjct: 132 DAEMLINIKEHVLVPEHQVLTNDEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVV 191
Query: 353 KIIRPSETAGRYITYRYVI 297
KIIRPSETAGRY+TYRYV+
Sbjct: 192 KIIRPSETAGRYVTYRYVV 210