BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00010642
         (726 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   174   2e-41
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              174   2e-41
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]   174   3e-41
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A...   172   8e-41
gb|AFW68944.1| hypothetical protein ZEAMMB73_467667 [Zea mays]        171   2e-40
gb|AFW68943.1| hypothetical protein ZEAMMB73_467667 [Zea mays]        171   2e-40
gb|AFW68941.1| hypothetical protein ZEAMMB73_467667 [Zea mays]        171   2e-40
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   171   3e-40
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus...   171   3e-40
ref|XP_006449856.1| hypothetical protein CICLE_v10014841mg [Citr...   171   3e-40
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   171   3e-40
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   167   2e-39
ref|XP_006352367.1| PREDICTED: transcription initiation factor I...   167   4e-39
ref|XP_006352364.1| PREDICTED: transcription initiation factor I...   167   4e-39
ref|XP_003573836.1| PREDICTED: transcription initiation factor I...   166   7e-39
gb|EXB41552.1| Transcription initiation factor IIF subunit alpha...   164   3e-38
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   162   8e-38
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   162   1e-37
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   162   1e-37
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   160   5e-37

>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score =  174 bits (442), Expect = 2e-41
 Identities = 109/240 (45%), Positives = 122/240 (50%), Gaps = 4/240 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK-SEGMSGGELDGG 549
           K+AQYKQLTLEEAEEKM  R+  A GY+RWMMKAA NG AAFG+++K  +  +GG   GG
Sbjct: 159 KVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGG 218

Query: 548 RPKK---GKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXX 378
           R +K   G                    RKNRLGLN                        
Sbjct: 219 RGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLN-KRSGDDDEEGPRGGDHDLDDDDI 277

Query: 377 XXXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXX 198
               DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                   
Sbjct: 278 EKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSG 337

Query: 197 XXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAPS 18
                                      DE GLSPVLAPK KD PKEE ADN+P+K+A  S
Sbjct: 338 KELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATAS 397


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  174 bits (442), Expect = 2e-41
 Identities = 109/240 (45%), Positives = 122/240 (50%), Gaps = 4/240 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK-SEGMSGGELDGG 549
           K+AQYKQLTLEEAEEKM  R+  A GY+RWMMKAA NG AAFG+++K  +  +GG   GG
Sbjct: 164 KVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGG 223

Query: 548 RPKK---GKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXX 378
           R +K   G                    RKNRLGLN                        
Sbjct: 224 RGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLN-KRSGDDDEEGPRGGDHDLDDDDI 282

Query: 377 XXXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXX 198
               DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                   
Sbjct: 283 EKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSG 342

Query: 197 XXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAPS 18
                                      DE GLSPVLAPK KD PKEE ADN+P+K+A  S
Sbjct: 343 KELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATAS 402


>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score =  174 bits (441), Expect = 3e-41
 Identities = 109/240 (45%), Positives = 122/240 (50%), Gaps = 4/240 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK-SEGMSGGELDGG 549
           K+AQYKQLTLEEAEEKM  R+  A GY+RWMMKAA NG AAFG+++K  +  +GG   GG
Sbjct: 60  KVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGG 119

Query: 548 RPKK---GKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXX 378
           R +K   G                    RKNRLGLN                        
Sbjct: 120 RGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLN-KRSGDDDEEGPRGGDHDLDDDDI 178

Query: 377 XXXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXX 198
               DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                   
Sbjct: 179 EKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSG 238

Query: 197 XXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAPS 18
                                      DE GLSPVLAPK KD PKEE ADN+P+K+A  S
Sbjct: 239 KELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSAPAS 298


>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
           gi|548861791|gb|ERN19162.1| hypothetical protein
           AMTR_s00061p00167160 [Amborella trichopoda]
          Length = 558

 Score =  172 bits (437), Expect = 8e-41
 Identities = 114/247 (46%), Positives = 127/247 (51%), Gaps = 6/247 (2%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKKSEGMSG-GELDGG 549
           K+AQYKQLTLEEAEEKM  R+ NA GYERW+MKAA NGA+AF DM+K +G  G G   GG
Sbjct: 175 KVAQYKQLTLEEAEEKMKNRRKNAEGYERWIMKAANNGASAFRDMEKIDGSGGNGGASGG 234

Query: 548 RPKKG---KNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXX 378
           R +KG   ++                  RKNRLGLN                        
Sbjct: 235 RRRKGSGDEDDDAVRSDREGEDDDDEEARKNRLGLNKKTFDDEGEEVPRGDDHDFDDDDI 294

Query: 377 XXXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ--XXXXXXXXXXXXXXXXX 204
               DWEHEEIFTDDDEAVGNDPEERED APE+PAPPEIKQ                   
Sbjct: 295 EKGDDWEHEEIFTDDDEAVGNDPEEREDFAPEVPAPPEIKQDDEDEDEGNEDEEGGLSKS 354

Query: 203 XXXXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAA 24
                        LNES            D+ G S VLAPK K+  KEE  DN+P KTA 
Sbjct: 355 GRELKKLLGRAGGLNESDGDDDDDDDDLDDDMGTSSVLAPKQKEV-KEEPVDNSPTKTAT 413

Query: 23  PSGSTRG 3
            SGS RG
Sbjct: 414 -SGSNRG 419


>gb|AFW68944.1| hypothetical protein ZEAMMB73_467667 [Zea mays]
          Length = 419

 Score =  171 bits (434), Expect = 2e-40
 Identities = 118/243 (48%), Positives = 125/243 (51%), Gaps = 2/243 (0%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFG-DMKKSEGMSGGELDGG 549
           KIAQYKQLTLEEAEEKM+KRK +ATGYERWMMKAA NG AAFG DMKK E  +GGE +  
Sbjct: 58  KIAQYKQLTLEEAEEKMNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEATNGGEKESA 117

Query: 548 RPKKGK-NXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           RPKKGK N                  RKNRLGL                           
Sbjct: 118 RPKKGKNNEEGNNSDKGEEDEEEEATRKNRLGLT--KKGMDDDEEGGKDLDFDLDDEIEK 175

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEE FTDDDEAV  DPEER DLAPEIPAPPEIKQ                     
Sbjct: 176 GDDWEHEETFTDDDEAVDIDPEERADLAPEIPAPPEIKQ---DDEENEEEGGLSKSGKEL 232

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAPSGS 12
                    LNES             E   SPVLAPK KD  K+E  D++P K  APSG 
Sbjct: 233 KKLLGRAAGLNES--DADEDEEDEDQEDDSSPVLAPKQKDQVKDEPVDSSPSK-PAPSGH 289

Query: 11  TRG 3
            RG
Sbjct: 290 ARG 292


>gb|AFW68943.1| hypothetical protein ZEAMMB73_467667 [Zea mays]
          Length = 502

 Score =  171 bits (434), Expect = 2e-40
 Identities = 118/243 (48%), Positives = 125/243 (51%), Gaps = 2/243 (0%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFG-DMKKSEGMSGGELDGG 549
           KIAQYKQLTLEEAEEKM+KRK +ATGYERWMMKAA NG AAFG DMKK E  +GGE +  
Sbjct: 138 KIAQYKQLTLEEAEEKMNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEATNGGEKESA 197

Query: 548 RPKKGK-NXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           RPKKGK N                  RKNRLGL                           
Sbjct: 198 RPKKGKNNEEGNNSDKGEEDEEEEATRKNRLGLT--KKGMDDDEEGGKDLDFDLDDEIEK 255

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEE FTDDDEAV  DPEER DLAPEIPAPPEIKQ                     
Sbjct: 256 GDDWEHEETFTDDDEAVDIDPEERADLAPEIPAPPEIKQ---DDEENEEEGGLSKSGKEL 312

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAPSGS 12
                    LNES             E   SPVLAPK KD  K+E  D++P K  APSG 
Sbjct: 313 KKLLGRAAGLNES--DADEDEEDEDQEDDSSPVLAPKQKDQVKDEPVDSSPSK-PAPSGH 369

Query: 11  TRG 3
            RG
Sbjct: 370 ARG 372


>gb|AFW68941.1| hypothetical protein ZEAMMB73_467667 [Zea mays]
          Length = 505

 Score =  171 bits (434), Expect = 2e-40
 Identities = 118/243 (48%), Positives = 125/243 (51%), Gaps = 2/243 (0%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFG-DMKKSEGMSGGELDGG 549
           KIAQYKQLTLEEAEEKM+KRK +ATGYERWMMKAA NG AAFG DMKK E  +GGE +  
Sbjct: 141 KIAQYKQLTLEEAEEKMNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEATNGGEKESA 200

Query: 548 RPKKGK-NXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           RPKKGK N                  RKNRLGL                           
Sbjct: 201 RPKKGKNNEEGNNSDKGEEDEEEEATRKNRLGLT--KKGMDDDEEGGKDLDFDLDDEIEK 258

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEE FTDDDEAV  DPEER DLAPEIPAPPEIKQ                     
Sbjct: 259 GDDWEHEETFTDDDEAVDIDPEERADLAPEIPAPPEIKQ---DDEENEEEGGLSKSGKEL 315

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAPSGS 12
                    LNES             E   SPVLAPK KD  K+E  D++P K  APSG 
Sbjct: 316 KKLLGRAAGLNES--DADEDEEDEDQEDDSSPVLAPKQKDQVKDEPVDSSPSK-PAPSGH 372

Query: 11  TRG 3
            RG
Sbjct: 373 ARG 375


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           isoform X1 [Citrus sinensis]
           gi|568825955|ref|XP_006467341.1| PREDICTED:
           transcription initiation factor IIF subunit alpha-like
           isoform X2 [Citrus sinensis]
          Length = 538

 Score =  171 bits (432), Expect = 3e-40
 Identities = 113/243 (46%), Positives = 122/243 (50%), Gaps = 3/243 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKKSEGM-SGGELDGG 549
           K+AQYKQLTLEEAEEKM  R+  A GYERWMMKAA NGAAAFG+++K +   S G    G
Sbjct: 164 KVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRG 223

Query: 548 RPKK-GKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           R KK G                    RKNRLGLN                          
Sbjct: 224 RSKKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLN-KRGEDDDEEGPRGGDLDLDEDDVEK 282

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                     
Sbjct: 283 GDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELK 342

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAP-KEETADNTPLKTAAPSG 15
                                    DE G SP+LAPK KD P KEE ADN+P K  APSG
Sbjct: 343 KLLGRANGLNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAK-PAPSG 401

Query: 14  STR 6
           S R
Sbjct: 402 SGR 404


>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  171 bits (432), Expect = 3e-40
 Identities = 112/246 (45%), Positives = 125/246 (50%), Gaps = 5/246 (2%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFG-----DMKKSEGMSGGE 561
           K+AQYKQLTLEEAEEKM  RK  A GYERWMMKAA NG AAFG     D K+S    GG+
Sbjct: 164 KVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGK 223

Query: 560 LDGGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXX 381
               R K  ++                  R++RLGLN                       
Sbjct: 224 ---NRKKTDEDEEGHVSDKGEEDEDDEVARRSRLGLN-KKGGDDDEEGPRGGDLDQDDDD 279

Query: 380 XXXXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXX 201
                DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                  
Sbjct: 280 IEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDDEDEDEDNEEGGGLSKS 339

Query: 200 XXXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAP 21
                       LNES            DE G+ PV+A KPKDAPKEE ADN+P K A  
Sbjct: 340 GKELKKLLRTSGLNESDAEDDDDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSKPAV- 398

Query: 20  SGSTRG 3
           +G+ RG
Sbjct: 399 TGTARG 404


>ref|XP_006449856.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
           gi|557552467|gb|ESR63096.1| hypothetical protein
           CICLE_v10014841mg [Citrus clementina]
          Length = 420

 Score =  171 bits (432), Expect = 3e-40
 Identities = 113/243 (46%), Positives = 122/243 (50%), Gaps = 3/243 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKKSEGM-SGGELDGG 549
           K+AQYKQLTLEEAEEKM  R+  A GYERWMMKAA NGAAAFG+++K +   S G    G
Sbjct: 46  KVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRG 105

Query: 548 RPKK-GKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           R KK G                    RKNRLGLN                          
Sbjct: 106 RSKKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLN-KRGEDDDEEGPRGGDLDLDEDDVEK 164

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                     
Sbjct: 165 GDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELK 224

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAP-KEETADNTPLKTAAPSG 15
                                    DE G SP+LAPK KD P KEE ADN+P K  APSG
Sbjct: 225 KLLGRANGLNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAK-PAPSG 283

Query: 14  STR 6
           S R
Sbjct: 284 SGR 286


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
           gi|567915083|ref|XP_006449855.1| hypothetical protein
           CICLE_v10014841mg [Citrus clementina]
           gi|557552465|gb|ESR63094.1| hypothetical protein
           CICLE_v10014841mg [Citrus clementina]
           gi|557552466|gb|ESR63095.1| hypothetical protein
           CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  171 bits (432), Expect = 3e-40
 Identities = 113/243 (46%), Positives = 122/243 (50%), Gaps = 3/243 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKKSEGM-SGGELDGG 549
           K+AQYKQLTLEEAEEKM  R+  A GYERWMMKAA NGAAAFG+++K +   S G    G
Sbjct: 164 KVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRG 223

Query: 548 RPKK-GKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           R KK G                    RKNRLGLN                          
Sbjct: 224 RSKKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLN-KRGEDDDEEGPRGGDLDLDEDDVEK 282

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                     
Sbjct: 283 GDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELK 342

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAP-KEETADNTPLKTAAPSG 15
                                    DE G SP+LAPK KD P KEE ADN+P K  APSG
Sbjct: 343 KLLGRANGLNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAK-PAPSG 401

Query: 14  STR 6
           S R
Sbjct: 402 SGR 404


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Solanum lycopersicum]
          Length = 534

 Score =  167 bits (424), Expect = 2e-39
 Identities = 115/246 (46%), Positives = 127/246 (51%), Gaps = 5/246 (2%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK---SEGMSGGELD 555
           K+AQYKQLTLEEAEEKM  R+  A GY+RWMMKAA NG AAFG++++    EG SGG   
Sbjct: 163 KVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGG-TR 221

Query: 554 GGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXX 375
           G +   G                    RKNRLGLN                         
Sbjct: 222 GRKKTSGDEDEGNASDHGDEDEEEEAARKNRLGLN-KRGIDDDEEGPRGGDLDLDDDDIE 280

Query: 374 XXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXX 198
              DWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ                    
Sbjct: 281 KGDDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGK 340

Query: 197 XXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETAD-NTPLKTAAP 21
                      LNES             E  +SPVLAPKPK+APKEE  + N+PLK AA 
Sbjct: 341 ELKKLLGKANGLNES---DEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKAAA- 396

Query: 20  SGSTRG 3
           SGS RG
Sbjct: 397 SGSNRG 402


>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           isoform X4 [Solanum tuberosum]
          Length = 535

 Score =  167 bits (422), Expect = 4e-39
 Identities = 115/246 (46%), Positives = 127/246 (51%), Gaps = 5/246 (2%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK---SEGMSGGELD 555
           K+AQYKQLTLEEAEEKM  R+  A GY+RWMMKAA NG AAFG++++    EG SGG   
Sbjct: 163 KVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGG-TR 221

Query: 554 GGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXX 375
           G +   G                    RKNRLGLN                         
Sbjct: 222 GRKKTSGDEDEGNASDHGDEDEEEEAARKNRLGLN-KRGIDDDEEGPRGGDLDLDDDDIE 280

Query: 374 XXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXX 198
              DWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ                    
Sbjct: 281 KGDDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGK 340

Query: 197 XXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETAD-NTPLKTAAP 21
                      LNES             E  +SPVLAPKPK+APKEE  + N+PLK AA 
Sbjct: 341 ELKKLLGKANGLNES--DAEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAA- 397

Query: 20  SGSTRG 3
           SGS RG
Sbjct: 398 SGSNRG 403


>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           isoform X1 [Solanum tuberosum]
           gi|565371548|ref|XP_006352365.1| PREDICTED:
           transcription initiation factor IIF subunit alpha-like
           isoform X2 [Solanum tuberosum]
           gi|565371550|ref|XP_006352366.1| PREDICTED:
           transcription initiation factor IIF subunit alpha-like
           isoform X3 [Solanum tuberosum]
          Length = 538

 Score =  167 bits (422), Expect = 4e-39
 Identities = 115/246 (46%), Positives = 127/246 (51%), Gaps = 5/246 (2%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK---SEGMSGGELD 555
           K+AQYKQLTLEEAEEKM  R+  A GY+RWMMKAA NG AAFG++++    EG SGG   
Sbjct: 163 KVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGG-TR 221

Query: 554 GGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXX 375
           G +   G                    RKNRLGLN                         
Sbjct: 222 GRKKTSGDEDEGNASDHGDEDEEEEAARKNRLGLN-KRGIDDDEEGPRGGDLDLDDDDIE 280

Query: 374 XXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXX 198
              DWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ                    
Sbjct: 281 KGDDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGK 340

Query: 197 XXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETAD-NTPLKTAAP 21
                      LNES             E  +SPVLAPKPK+APKEE  + N+PLK AA 
Sbjct: 341 ELKKLLGKANGLNES--DAEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAA- 397

Query: 20  SGSTRG 3
           SGS RG
Sbjct: 398 SGSNRG 403


>ref|XP_003573836.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Brachypodium distachyon]
          Length = 530

 Score =  166 bits (420), Expect = 7e-39
 Identities = 112/242 (46%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFG-DMKKSEGMSGGELDGG 549
           K+AQYKQLTLEEAEEKM+KRK +ATGYERWMMKAATNG AAFG D+KK E  + GE +  
Sbjct: 167 KVAQYKQLTLEEAEEKMNKRKTSATGYERWMMKAATNGPAAFGSDIKKLEPTNDGEKESA 226

Query: 548 RPKKGK-NXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           RPKKGK N                  RK+RLGL+                          
Sbjct: 227 RPKKGKDNEEGNNSDKGEENEEDEAARKDRLGLS--KRGMDDDEEGGKDLDFDLDDEIEK 284

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEE FTDDDEAV  DPEER DLAPEIPAPPEIKQ                     
Sbjct: 285 GDDWEHEETFTDDDEAVDIDPEERADLAPEIPAPPEIKQ---DDEENEEEGGLSKSGKEL 341

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAPSGS 12
                     NES            D+   SPVLAPK  D PK+E  DN+P K    SG 
Sbjct: 342 KKLLGRASGQNES---DADEDDEDDDDDESSPVLAPKQNDQPKDEPVDNSPAKPTPSSGH 398

Query: 11  TR 6
            R
Sbjct: 399 AR 400


>gb|EXB41552.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
          Length = 483

 Score =  164 bits (415), Expect = 3e-38
 Identities = 106/246 (43%), Positives = 120/246 (48%), Gaps = 5/246 (2%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMK----KSEGMSGGEL 558
           ++AQYKQLTLEEAEEKM  RK  A GY+RWMMKAA NG AAFG+      K  G +GG  
Sbjct: 110 RVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKAANNGPAAFGEKDNFDDKDSGAAGGR- 168

Query: 557 DGGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXX 378
            G R                        RKNRLGLN                        
Sbjct: 169 -GRRKASADEGEGNVSDKGDEDEEDEVARKNRLGLNKRGGDDDDEEGPRGDDLDLDDDDI 227

Query: 377 XXXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXX 201
               DWEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPEIKQ                   
Sbjct: 228 EKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEDDEDEDNEEEGGLSKSG 287

Query: 200 XXXXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLKTAAP 21
                       LN+S            ++ G+SP +APK KDA KEE A+N+P K   P
Sbjct: 288 KELKKLLGRAGGLNDSDAEDDDDSEEMDEDIGVSPTVAPKQKDAVKEEPAENSPAK-PTP 346

Query: 20  SGSTRG 3
           S S +G
Sbjct: 347 SASAKG 352


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
           [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
           transcription initiation factor IIF alpha subunit family
           protein [Populus trichocarpa]
          Length = 540

 Score =  162 bits (411), Expect = 8e-38
 Identities = 109/245 (44%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK---SEGMSGGELD 555
           K+A YKQLTLEEAEEKM  R+  A GYERWMMKAA NGAAAFG+++K    EG+S G   
Sbjct: 166 KVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRG 225

Query: 554 GGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXX 375
           G R   G +                  RK+RLGLN                         
Sbjct: 226 GRRKASGDDDEGNVSDRGEEDEEEEAGRKSRLGLN-KQGGDDDEEGPRGGDLDMDDDDIE 284

Query: 374 XXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXX 195
              DWEHEEIFTDDDEAV  DPEEREDLAPE+PAPPEIKQ                    
Sbjct: 285 KGDDWEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKE 344

Query: 194 XXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKD-APKEETADNTPLKTAAPS 18
                     LNES             +  +SPVLAPK KD  PKEE AD +P K   PS
Sbjct: 345 LKKLLGKANGLNES--DVEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADISPAK-PTPS 401

Query: 17  GSTRG 3
           GS +G
Sbjct: 402 GSAKG 406


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
           gi|550335193|gb|ERP58675.1| hypothetical protein
           POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  162 bits (410), Expect = 1e-37
 Identities = 108/245 (44%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK---SEGMSGGELD 555
           K+A YKQLTLEEAEEKM  R+  A GYERWMMKAA NGAAAFG+++K    +G+S G   
Sbjct: 166 KVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRG 225

Query: 554 GGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXX 375
           G +   G +                  RK+RLGLN                         
Sbjct: 226 GRKKANGDDDEGNVSDKGEEDEEEEAGRKSRLGLN-KGGGDDDEEGPRGGDLDMDDDDIE 284

Query: 374 XXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXX 195
              DWEHEEIFTDDDEAV  DPEEREDLAPE+PAPPEIKQ                    
Sbjct: 285 KGDDWEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKE 344

Query: 194 XXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDA-PKEETADNTPLKTAAPS 18
                     LNES             +  +SPVLAPK KDA PKEE ADN+P K   P 
Sbjct: 345 LKKLLGKANGLNES--DAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAK-PTPP 401

Query: 17  GSTRG 3
           GS +G
Sbjct: 402 GSAKG 406


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
           [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
           transcription initiation factor IIF alpha subunit family
           protein [Populus trichocarpa]
          Length = 541

 Score =  162 bits (410), Expect = 1e-37
 Identities = 108/245 (44%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKK---SEGMSGGELD 555
           K+A YKQLTLEEAEEKM  R+  A GYERWMMKAA NGAAAFG+++K    +G+S G   
Sbjct: 166 KVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRG 225

Query: 554 GGRPKKGKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXX 375
           G +   G +                  RK+RLGLN                         
Sbjct: 226 GRKKANGDDDEGNVSDKGEEDEEEEAGRKSRLGLN-KGGGDDDEEGPRGGDLDMDDDDIE 284

Query: 374 XXXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXX 195
              DWEHEEIFTDDDEAV  DPEEREDLAPE+PAPPEIKQ                    
Sbjct: 285 KGDDWEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKE 344

Query: 194 XXXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDA-PKEETADNTPLKTAAPS 18
                     LNES             +  +SPVLAPK KDA PKEE ADN+P K   P 
Sbjct: 345 LKKLLGKANGLNES--DAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAK-PTPP 401

Query: 17  GSTRG 3
           GS +G
Sbjct: 402 GSAKG 406


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
           gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 533

 Score =  160 bits (404), Expect = 5e-37
 Identities = 106/243 (43%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
 Frame = -2

Query: 725 KIAQYKQLTLEEAEEKMSKRKNNATGYERWMMKAATNGAAAFGDMKKSEGMSGGELDGGR 546
           K+AQYKQLTLEEAEEKM  R+  A GYERWMMKAA NG AAFG+++K +    G   G  
Sbjct: 165 KVAQYKQLTLEEAEEKMRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRG 224

Query: 545 PKK--GKNXXXXXXXXXXXXXXXXXXRKNRLGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 372
            KK  G +                  RKNRLGLN                          
Sbjct: 225 RKKAAGDDEEGNVSDRGDEDEEEEAARKNRLGLN-KRGGDDDEEGPRGGDHDIDDDDIEK 283

Query: 371 XXDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXX 192
             DWEHEEIFTDDDEAVGND EEREDLAPE+PAPPEIKQ                     
Sbjct: 284 GDDWEHEEIFTDDDEAVGNDREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKEL 343

Query: 191 XXXXXXXXXLNESXXXXXXXXXXXXDETGLSPVLAPKPKDAPKEETADNTPLK--TAAPS 18
                    LN+S            ++  +SPVLA  PK  PKEE ADN+P K  T+A S
Sbjct: 344 KKLLGRAGGLNDSDAEDDDDDDDMDEDVSISPVLA--PKQTPKEEPADNSPAKPMTSASS 401

Query: 17  GST 9
             T
Sbjct: 402 KGT 404