BLASTX nr result

ID: Stemona21_contig00009804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00009804
         (303 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS55802.1| Histone H2A [Triticum urartu]                           57   3e-06
dbj|BAK05993.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06
dbj|BAK04720.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
gb|EMT29882.1| Histone H2A [Aegilops tauschii]                         56   6e-06
gb|EMT00238.1| Histone H2A [Aegilops tauschii]                         55   7e-06
gb|EMS55804.1| Histone H2A [Triticum urartu]                           55   1e-05

>gb|EMS55802.1| Histone H2A [Triticum urartu]
          Length = 139

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   VLPNINPVLLPKKTAAKEGSTPKSPAKGTKSPAKA 107
           V+P INPVLLPK+TA KEG  PKSP K TKSP KA
Sbjct: 102 VIPKINPVLLPKRTAEKEGKEPKSPKKATKSPKKA 136


>dbj|BAK05993.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 156

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   VLPNINPVLLPKKTAAKEGSTPKSPAKGTKSPAKA 107
           V+P INPVLLPK+TA KEG  PKSP K TKSP KA
Sbjct: 119 VIPKINPVLLPKRTAEKEGKEPKSPKKATKSPKKA 153


>dbj|BAK04720.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 156

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   VLPNINPVLLPKKTAAKEGSTPKSPAKGTKSPAKA 107
           V+P INPVLLPK+TA KEG  PKSP K TKSP KA
Sbjct: 119 VIPKINPVLLPKRTAEKEGKGPKSPKKATKSPKKA 153


>gb|EMT29882.1| Histone H2A [Aegilops tauschii]
          Length = 156

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +3

Query: 3   VLPNINPVLLPKKTAAKEGSTPKSPAKGTKSPAKA 107
           V+P INPVLLPKKTA KEG  PKSP K  KSP KA
Sbjct: 119 VIPKINPVLLPKKTAEKEGKEPKSPKKAAKSPKKA 153


>gb|EMT00238.1| Histone H2A [Aegilops tauschii]
          Length = 127

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +3

Query: 3   VLPNINPVLLPKKTAAKEGSTPKSPAKGTKSPAKA 107
           V+P INPVLLPKKTA KEG  PKSP K  KSP KA
Sbjct: 87  VIPKINPVLLPKKTAEKEGKAPKSPKKTAKSPKKA 121


>gb|EMS55804.1| Histone H2A [Triticum urartu]
          Length = 158

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +3

Query: 3   VLPNINPVLLPKKTAAKEGSTPKSPAKGTKSPAK 104
           V+P INPVLLPK+TA KEG  PKSP K TKSP K
Sbjct: 121 VIPKINPVLLPKRTAEKEGKEPKSPKKATKSPKK 154


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