BLASTX nr result
ID: Stemona21_contig00009578
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00009578
(504 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I... 111 9e-23
ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, ... 111 9e-23
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ... 109 4e-22
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I... 108 7e-22
ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_... 108 1e-21
gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theob... 107 2e-21
ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutr... 106 3e-21
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part... 105 8e-21
ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, I... 105 8e-21
dbj|BAJ97697.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 8e-21
ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, I... 104 1e-20
ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE1... 104 1e-20
gb|AFK41236.1| unknown [Medicago truncatula] 104 1e-20
ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III ... 104 1e-20
ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutr... 103 2e-20
ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, I... 103 2e-20
ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, I... 103 2e-20
gb|ACG30756.1| DNA-directed RNA polymerases I, II, and III 7.3 k... 103 2e-20
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp.... 103 2e-20
emb|CBI25651.3| unnamed protein product [Vitis vinifera] 103 2e-20
>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Vitis vinifera]
gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4 [Vitis
vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
product [Vitis vinifera]
Length = 51
Score = 111 bits (278), Expect = 9e-23
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQPEPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
12-like [Glycine max] gi|356560019|ref|XP_003548293.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Glycine max]
gi|567912183|ref|XP_006448405.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|255630274|gb|ACU15492.1| unknown [Glycine max]
gi|557551016|gb|ESR61645.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|561025849|gb|ESW24534.1| hypothetical protein
PHAVU_004G138700g [Phaseolus vulgaris]
Length = 51
Score = 111 bits (278), Expect = 9e-23
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQPEPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
DNA-directed RNA polymerase I, II, and III polypeptide
isoform 2, partial [Zea mays]
Length = 100
Score = 109 bits (272), Expect = 4e-22
Identities = 51/54 (94%), Positives = 52/54 (96%), Gaps = 1/54 (1%)
Frame = +1
Query: 58 SPMDPQ-PEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
S MDPQ PEPVSY+CGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 47 STMDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 100
>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Cucumis sativus]
gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Cucumis sativus]
Length = 51
Score = 108 bits (270), Expect = 7e-22
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQPEPVSYICGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_001172391.1|
Os01g0530366 [Oryza sativa Japonica Group]
gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
sativa Japonica Group] gi|242048352|ref|XP_002461922.1|
hypothetical protein SORBIDRAFT_02g010660 [Sorghum
bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
protein SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|514726952|ref|XP_004956106.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Setaria italica] gi|195609858|gb|ACG26759.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195620974|gb|ACG32317.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195645780|gb|ACG42358.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195646246|gb|ACG42591.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|218188380|gb|EEC70807.1|
hypothetical protein OsI_02267 [Oryza sativa Indica
Group] gi|222618595|gb|EEE54727.1| hypothetical protein
OsJ_02072 [Oryza sativa Japonica Group]
gi|241925299|gb|EER98443.1| hypothetical protein
SORBIDRAFT_02g010660 [Sorghum bicolor]
gi|241940338|gb|EES13483.1| hypothetical protein
SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
Japonica Group] gi|255676033|dbj|BAH92949.1|
Os05g0151800 [Oryza sativa Japonica Group]
Length = 52
Score = 108 bits (269), Expect = 1e-21
Identities = 50/52 (96%), Positives = 51/52 (98%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 MDPQ-PEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQ PEPVSY+CGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theobroma cacao]
Length = 51
Score = 107 bits (266), Expect = 2e-21
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQPEPV+YICGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVTYICGDCGQENTLKHGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131670|ref|XP_006392764.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131674|ref|XP_006392765.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089341|gb|ESQ30049.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089342|gb|ESQ30050.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089343|gb|ESQ30051.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
Length = 51
Score = 106 bits (265), Expect = 3e-21
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQPEPV+Y+CGDCG ENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
gi|482553592|gb|EOA17785.1| hypothetical protein
CARUB_v10006178mg, partial [Capsella rubella]
Length = 68
Score = 105 bits (261), Expect = 8e-21
Identities = 48/58 (82%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +1
Query: 46 RSVFSPMD-PQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
R F+ MD P PEPV+Y+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 11 RIQFNTMDQPLPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 68
>ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Brachypodium distachyon]
gi|357145250|ref|XP_003573577.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Brachypodium distachyon]
Length = 52
Score = 105 bits (261), Expect = 8e-21
Identities = 49/52 (94%), Positives = 50/52 (96%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 MDPQ-PEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQ PEPVSY+CGDCGAENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKSGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>dbj|BAJ97697.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 52
Score = 105 bits (261), Expect = 8e-21
Identities = 49/52 (94%), Positives = 50/52 (96%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 MDPQ-PEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQ PEPVSY+CGDCGAENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKTGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Cicer arietinum]
Length = 51
Score = 104 bits (260), Expect = 1e-20
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQPEPVSY+CGDCG ENT+K GDVI+CR+CGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQPEPVSYLCGDCGVENTIKSGDVIRCRDCGYRILYKKRTRRIVQYEAR 51
>ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE12 [Arabidopsis
thaliana] gi|75171496|sp|Q9FLM8.1|NRPBC_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
12; AltName: Full=DNA-directed RNA Polymerase II subunit
K gi|9759147|dbj|BAB09703.1| unnamed protein product
[Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
unknown protein [Arabidopsis thaliana]
gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
polymerase II polypeptide K [Arabidopsis thaliana]
gi|332007242|gb|AED94625.1| DNA-directed RNA polymerase
NRPB12/NRPD12/NRPE12 [Arabidopsis thaliana]
Length = 51
Score = 104 bits (259), Expect = 1e-20
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDP PEPV+Y+CGDCG ENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPAPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>gb|AFK41236.1| unknown [Medicago truncatula]
Length = 51
Score = 104 bits (259), Expect = 1e-20
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDP PEPVSY+CGDCG ENTLK GDVIQCR+CGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPLPEPVSYLCGDCGVENTLKSGDVIQCRDCGYRILYKKRTRRIVQYEAR 51
>ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III subunit RPABC4
[Medicago truncatula] gi|355484947|gb|AES66150.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC4 [Medicago truncatula]
Length = 121
Score = 104 bits (259), Expect = 1e-20
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDP PEPVSY+CGDCG ENTLK GDVIQCR+CGYRILYKKRTRRIVQYEAR
Sbjct: 14 MDPLPEPVSYLCGDCGVENTLKSGDVIQCRDCGYRILYKKRTRRIVQYEAR 64
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +1
Query: 43 ARSVFSP-MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
AR + P MDP P+P+ Y+CGDCGAE L V+QC C Y+ILYKKRT R++QYEAR
Sbjct: 63 ARLLLKPDMDPPPQPIRYLCGDCGAETPLYTDGVLQCCVCFYKILYKKRTHRVLQYEAR 121
>ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
gi|557106544|gb|ESQ46859.1| hypothetical protein
EUTSA_v10028022mg [Eutrema salsugineum]
Length = 51
Score = 103 bits (258), Expect = 2e-20
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDP PEPV+Y+CGDCG ENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MDPLPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Setaria italica]
Length = 52
Score = 103 bits (258), Expect = 2e-20
Identities = 47/52 (90%), Positives = 50/52 (96%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 MDPQ-PEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQ PEPVSY+CGDCG+ENTLKPGDVIQCR+CGYRILYKKRT RIVQYEAR
Sbjct: 1 MDPQQPEPVSYLCGDCGSENTLKPGDVIQCRDCGYRILYKKRTHRIVQYEAR 52
>ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Solanum lycopersicum]
Length = 52
Score = 103 bits (258), Expect = 2e-20
Identities = 49/52 (94%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 MDPQP-EPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MD QP EPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDSQPVEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>gb|ACG30756.1| DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide
[Zea mays]
Length = 52
Score = 103 bits (258), Expect = 2e-20
Identities = 49/52 (94%), Positives = 50/52 (96%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 MDPQ-PEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
MDPQ PEPVSY+CGDCGAENTLKPGDVIQ RECGYRILYKKRTRRIVQYEAR
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKPGDVIQWRECGYRILYKKRTRRIVQYEAR 52
>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316495|gb|EFH46918.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 52
Score = 103 bits (257), Expect = 2e-20
Identities = 46/52 (88%), Positives = 50/52 (96%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 MDP-QPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 216
M+P QPEPV+Y+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1 MEPAQPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 52
>emb|CBI25651.3| unnamed protein product [Vitis vinifera]
Length = 82
Score = 103 bits (257), Expect = 2e-20
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +1
Query: 64 MDPQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQ 204
MDPQPEPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQ
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ 47