BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00009250
         (1236 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   439   e-120
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   439   e-120
ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-114
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-112
ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citr...   406   e-110
gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]     404   e-110
ref|XP_002303975.2| pentatricopeptide repeat-containing family p...   404   e-110
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,...   393   e-107
gb|EMJ09439.1| hypothetical protein PRUPE_ppa016950mg, partial [...   385   e-104
gb|EOY32273.1| Pentatricopeptide repeat (PPR) superfamily protei...   379   e-102
ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containi...   374   e-101
ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containi...   372   e-100
gb|ESW25005.1| hypothetical protein PHAVU_003G000200g [Phaseolus...   368   3e-99
ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Caps...   359   1e-96
ref|XP_002864446.1| pentatricopeptide repeat-containing protein ...   358   2e-96
ref|NP_200442.1| pentatricopeptide repeat-containing protein [Ar...   353   6e-95
ref|XP_006401350.1| hypothetical protein EUTSA_v10015484mg [Eutr...   342   1e-91
ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [S...   339   1e-90
ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containi...   337   8e-90
ref|XP_003589826.1| Pentatricopeptide repeat-containing protein ...   336   1e-89

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
            [Vitis vinifera]
          Length = 576

 Score =  439 bits (1129), Expect = e-120
 Identities = 211/356 (59%), Positives = 273/356 (76%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNT 347
            +CS  +H+ Q H F+L+RGLD+D++LL+RF+++CS LG + Y++ +F H   PDI+L NT
Sbjct: 50   QCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNT 109

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFG 527
            +I+ LS    A +A+ L+ RI     R DTYS PFVL+AV  L A+  G+QIH QA+  G
Sbjct: 110  IIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTG 169

Query: 528  LCSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFE 707
            L SDIHV T LI MYS+C  +S AR LFD    +DV  WNAMVAG+ K+GDVD AR LFE
Sbjct: 170  LVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFE 229

Query: 708  CMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMD 887
             M ERNVISWT VIAGYAQM+RP+EAI +FR+MQL++ +EPDEIA+LA LSACA LGA++
Sbjct: 230  RMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEE-VEPDEIAMLAALSACAHLGALE 288

Query: 888  LGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFA 1067
            LGEW+H+++++ GL KIVPL NALIDMYAK G I KA+EVF++MEH+SV+TWT+MI G A
Sbjct: 289  LGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLA 348

Query: 1068 FHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
             HGLG EALEMF  MER  +KPN++TF+A+LSAC H+G   +GRWYF  M ++Y I
Sbjct: 349  LHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGI 404


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  439 bits (1129), Expect = e-120
 Identities = 211/356 (59%), Positives = 273/356 (76%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNT 347
            +CS  +H+ Q H F+L+RGLD+D++LL+RF+++CS LG + Y++ +F H   PDI+L NT
Sbjct: 50   QCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNT 109

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFG 527
            +I+ LS    A +A+ L+ RI     R DTYS PFVL+AV  L A+  G+QIH QA+  G
Sbjct: 110  IIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTG 169

Query: 528  LCSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFE 707
            L SDIHV T LI MYS+C  +S AR LFD    +DV  WNAMVAG+ K+GDVD AR LFE
Sbjct: 170  LVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFE 229

Query: 708  CMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMD 887
             M ERNVISWT VIAGYAQM+RP+EAI +FR+MQL++ +EPDEIA+LA LSACA LGA++
Sbjct: 230  RMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEE-VEPDEIAMLAALSACAHLGALE 288

Query: 888  LGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFA 1067
            LGEW+H+++++ GL KIVPL NALIDMYAK G I KA+EVF++MEH+SV+TWT+MI G A
Sbjct: 289  LGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLA 348

Query: 1068 FHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
             HGLG EALEMF  MER  +KPN++TF+A+LSAC H+G   +GRWYF  M ++Y I
Sbjct: 349  LHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGI 404


>ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            isoform X1 [Citrus sinensis]
            gi|568871598|ref|XP_006488969.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At5g56310-like isoform X2 [Citrus sinensis]
          Length = 564

 Score =  419 bits (1077), Expect = e-114
 Identities = 203/358 (56%), Positives = 272/358 (75%), Gaps = 2/358 (0%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNT 347
            +C+  +H+  AH F++ RGLD+++ LL+RF+ SCS LG + YAY +F H   PD++L NT
Sbjct: 44   KCADIKHLFAAHGFMIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNT 103

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFG 527
             I+ L Q+     A+ L+ +IQ    RPD YSFPFVL+AV  LS ++ G++IH Q V  G
Sbjct: 104  TIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTG 163

Query: 528  LCSDIHVATGLIHMYSACNDLSHARLLFDETPLK--DVVVWNAMVAGHVKLGDVDGAREL 701
            L SD+HV   LI MY++C  +  AR +FDE  L+  +V VWN MVAG+ K+GD++ AR L
Sbjct: 164  LDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARAL 223

Query: 702  FECMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGA 881
            FE M E+NVISWTT+IAGYAQM++P+EAI +FR+MQ+++ ++PDEIA+LA LSACAQLGA
Sbjct: 224  FELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGA 282

Query: 882  MDLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAG 1061
            ++LGEW+H+++ + GL  IVPL NALIDMYAKSG I KA++VFE+M+++SV+TWTTMIAG
Sbjct: 283  VELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAG 342

Query: 1062 FAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
             A HGLG EAL+MF  MER  VKPN++TF+A+LSAC H+G   LGR YFN M SRY I
Sbjct: 343  LALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 400


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            [Cucumis sativus] gi|449493602|ref|XP_004159370.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  410 bits (1054), Expect = e-112
 Identities = 198/355 (55%), Positives = 271/355 (76%)
 Frame = +3

Query: 171  CSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTV 350
            C    H+ Q H F+L R LD+D+L L++F+ +C+ LGL+ YA+ +F +   PD+ L NT 
Sbjct: 34   CRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTA 93

Query: 351  IRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGL 530
            I+ LS++ +   A+ L+ RI+  G RPD+YS P VL+AV  LSA++ G+QIH Q V   L
Sbjct: 94   IKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSAL 153

Query: 531  CSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFEC 710
              D++VAT LI MYS+C  +S AR LFD    KDV +WNAMVAG+VK+G++  AR++F  
Sbjct: 154  DMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNE 213

Query: 711  MRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMDL 890
            M +RNVISWTT+IAGYAQ NRP EAI +FRKMQL++ +EPDEIA+LAVLSACA LGA++L
Sbjct: 214  MPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEE-VEPDEIAMLAVLSACADLGALEL 272

Query: 891  GEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFAF 1070
            GEW+H+++ + GL +IV L NALIDMYAKSGNI +A+EVFE+M+ +SV+TW+T+IA  A 
Sbjct: 273  GEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALAL 332

Query: 1071 HGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            HGLG EA++MF  ME+  V+PN+VTF+A+LSACSH+G   +GR+YF++M S Y+I
Sbjct: 333  HGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKI 387


>ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citrus clementina]
            gi|557548156|gb|ESR58785.1| hypothetical protein
            CICLE_v10014960mg [Citrus clementina]
          Length = 510

 Score =  406 bits (1043), Expect = e-110
 Identities = 198/344 (57%), Positives = 263/344 (76%), Gaps = 2/344 (0%)
 Frame = +3

Query: 210  VLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTVIRGLSQSGAAPKA 389
            ++ RGLD+++ LL+RF+ SCS LG + YAY +F H   PD++L NT I+ L Q+     A
Sbjct: 1    MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60

Query: 390  LSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGLCSDIHVATGLIHM 569
            + L+ +IQ    RPD YSFPFVL+AV  LS ++ G++IH Q V  GL SD+HV   LI M
Sbjct: 61   VILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQM 120

Query: 570  YSACNDLSHARLLFDETPLK--DVVVWNAMVAGHVKLGDVDGARELFECMRERNVISWTT 743
            Y++C  +  AR +FDE  L+  +V VWN MVAG+ K+GD++ AR LFE M E+NVISWTT
Sbjct: 121  YASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTT 180

Query: 744  VIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMDLGEWVHSFVNRR 923
            +IAGYAQM++P+EAI +FR+MQ+++ ++PDEIA+LA LSACAQLGA++LGEW+H+++ + 
Sbjct: 181  LIAGYAQMDQPNEAITLFRRMQVEN-VKPDEIAMLAALSACAQLGAVELGEWIHNYIEQY 239

Query: 924  GLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFAFHGLGNEALEMF 1103
            GL  IVPL NALIDMYAKSG I KA++VFE+M+++SV+TWTTMIAG A HGLG EAL+MF
Sbjct: 240  GLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMF 299

Query: 1104 HWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
              MER  VKPN++TF+A+LSAC H+G   LGR YFN M SRY I
Sbjct: 300  SRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGI 343


>gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]
          Length = 524

 Score =  404 bits (1039), Expect = e-110
 Identities = 203/357 (56%), Positives = 267/357 (74%), Gaps = 1/357 (0%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKH-SELPDIHLCN 344
            +CS+ +HI Q H  ++ RGL  D+L+LA F+QSCS LG + YAYLVF H ++  +I+L N
Sbjct: 12   QCSSFKHIRQTHGVLIPRGLRNDNLILAHFIQSCSSLGYSSYAYLVFTHHNKRHNIYLFN 71

Query: 345  TVIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRF 524
            T+I  +S S    +A+SL+ ++   G RPDTY+FPFVL+AV  LSA++ G+QIH QA+R 
Sbjct: 72   TMINVVSPS----EAVSLYNKLLLTGLRPDTYTFPFVLKAVIKLSAVEVGRQIHCQALRT 127

Query: 525  GLCSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELF 704
            GL SD++  T L+ MYS C  +  +R +FDE    DV +WNAMVAG+ K GDVD AR++F
Sbjct: 128  GLDSDVNAVTALVRMYSCCGSILDSRRMFDEMSFWDVALWNAMVAGYAKAGDVDNARKVF 187

Query: 705  ECMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAM 884
            E M ERN+ISWT+VIAGYAQM RP+EAI +F++M L++ +EPDE+A+LA+LSACA LG++
Sbjct: 188  EQMPERNLISWTSVIAGYAQMKRPEEAILLFKRMLLEN-VEPDEVAILALLSACAHLGSL 246

Query: 885  DLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGF 1064
             LGE +H+++ +RG  + + L NALIDMY KSG+I KA+ VFESM+ RSVVTWTTM+AG 
Sbjct: 247  RLGERIHNYIQKRGFSRKLRLNNALIDMYVKSGSIRKALNVFESMKERSVVTWTTMLAGL 306

Query: 1065 AFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            A HGLG EA  MF  ME   VKPND+TF+AVLSAC H G   +GRWYFN M SRY I
Sbjct: 307  ALHGLGREASVMFSRMESAVVKPNDITFIAVLSACRHAGLVEMGRWYFNNMDSRYGI 363


>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550343649|gb|EEE78954.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 543

 Score =  404 bits (1039), Expect = e-110
 Identities = 202/358 (56%), Positives = 266/358 (74%), Gaps = 7/358 (1%)
 Frame = +3

Query: 183  RHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKH-SELPDIHLCNTVIRG 359
            +HI Q HAF+L R LD D+LLL+RF+ +CS LG   YAY +F   +  PDI+L N +I+ 
Sbjct: 27   KHIHQTHAFMLLRALDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKA 86

Query: 360  LSQSGAAPKA-LSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGLCS 536
            LS S   PKA + L+  IQ  G RPD+YSFPF L+AV   S++Q+G+Q+H+Q++RFGL S
Sbjct: 87   LSSSPTHPKASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHS 146

Query: 537  DIHVATGLIHMYSACND--LSHARLLFDETPLK--DVVVWNAMVAGHVKLGDVDGARELF 704
            D+HV T  + MYS+     +  AR +FD   +   DV +WNAM+ G+ K GD+  AR+LF
Sbjct: 147  DLHVLTAFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLF 206

Query: 705  ECMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAM 884
            E M +RNVISWT +I GYAQ NRP +AIA+FR+MQL++ +EPDEIA+L  L+ACA+LGA+
Sbjct: 207  ERMPQRNVISWTALITGYAQANRPHDAIALFRRMQLEN-VEPDEIAMLVALTACARLGAL 265

Query: 885  DLGEWVHSFVNRRGLYKI-VPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAG 1061
            +LGEW+  +++R GL    +PL NALIDMYAKSG+I  A++VFE+M H++++TWTTMIAG
Sbjct: 266  ELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAG 325

Query: 1062 FAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
             A HGLG EALEMF  MER  VKPND+TF+A+LSACSH+G    GRWYFNRM SRY I
Sbjct: 326  LALHGLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGI 383


>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score =  393 bits (1009), Expect = e-107
 Identities = 201/358 (56%), Positives = 266/358 (74%), Gaps = 3/358 (0%)
 Frame = +3

Query: 171  CSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKH-SELPDIHLCNT 347
            CS  +H+ Q HAF+L R LD D+LLL+ F+QS S LG + YAY +F   +  P+I L NT
Sbjct: 21   CSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIFLYNT 80

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFG 527
            +IR LS S     ++ LF RIQ    RPD+YSFPF L+AV  LSA ++G Q H+QA+RFG
Sbjct: 81   IIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHSQAIRFG 140

Query: 528  LCSDIHVATGLIHMYSACNDLSHARLLFDETPL--KDVVVWNAMVAGHVKLGDVDGAREL 701
            L S +HV   LI MYS+ + +S AR LFD  PL  ++V +WNAM+  + K+ D+  A+ L
Sbjct: 141  LHSHLHVLVSLIRMYSSSH-ISDARKLFDGIPLTARNVALWNAMLTSYAKICDMPNAQHL 199

Query: 702  FECMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGA 881
            F+ M +RN+ISWT +I+GYA +NRP +AIA+FR MQL++ + PDEI LLAVLSACAQLGA
Sbjct: 200  FDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQN-VVPDEITLLAVLSACAQLGA 258

Query: 882  MDLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAG 1061
            ++LGEW+ ++++  GL++ VPL NALIDMYAKSGNI +A+ +FESM+H+++VTWTTMIAG
Sbjct: 259  LELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAG 318

Query: 1062 FAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
             A HGLG +ALEMF  MER+ VKPN++TF+AVLSACSH+G   L R +F  M SRY I
Sbjct: 319  LALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTI 376


>gb|EMJ09439.1| hypothetical protein PRUPE_ppa016950mg, partial [Prunus persica]
          Length = 532

 Score =  385 bits (989), Expect = e-104
 Identities = 201/368 (54%), Positives = 257/368 (69%), Gaps = 12/368 (3%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSE-LPDIHLCN 344
            +CS  +HI QAH F++  GL +D+  L R +Q+CS LG + YAY VF  +   P I+L N
Sbjct: 5    QCSNLKHIEQAHGFMVAGGLHQDNRTLPRLIQACSSLGFSDYAYSVFTRTHGQPSIYLYN 64

Query: 345  TVIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQS----GKQIHAQ 512
            T+I+  + S +   A+SL+ RIQ    RPDTYSFPFVL+AV  L+  Q     G QIH  
Sbjct: 65   TIIKAKALSPSPSHAISLYNRIQLAALRPDTYSFPFVLKAVVRLAPPQVQRLVGAQIHCH 124

Query: 513  AVRFGLCSDIHVATGLIHMYSACNDLSHARLLFDETP-----LKDVVVWNAMVAGHVKLG 677
             +  G   D  V T LIHMYS+C  +S AR LFD         +DV +WNAM+AG+ K G
Sbjct: 125  IIGIGFDMDASVLTALIHMYSSCGCVSDARTLFDGAAAFAFAFRDVALWNAMIAGYAKSG 184

Query: 678  DVDGARELFECM--RERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLA 851
            DVD AR LFE M  R RNVISWT +IAGYAQ++RP EAI VFR+MQL++ ++PDEI++LA
Sbjct: 185  DVDNARHLFELMPPRIRNVISWTALIAGYAQVDRPHEAITVFRRMQLEN-VQPDEISMLA 243

Query: 852  VLSACAQLGAMDLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRS 1031
             LSACA LGA+ LGEW+H+++ +    K+V L NALIDMYAKSGNI KA++VFE+ + ++
Sbjct: 244  ALSACAHLGALHLGEWIHNYIEKHEFRKLVSLNNALIDMYAKSGNITKALQVFENTKCKT 303

Query: 1032 VVTWTTMIAGFAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFN 1211
            VVTWTTMIAG A HGLG EALEMF  MER  +KPND+TF+A+LSACSH     +G WYF+
Sbjct: 304  VVTWTTMIAGLALHGLGREALEMFAQMERVKIKPNDITFIAILSACSHGRLVEIGHWYFS 363

Query: 1212 RMSSRYEI 1235
             M S+Y I
Sbjct: 364  IMVSKYRI 371


>gb|EOY32273.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            1 [Theobroma cacao] gi|508785018|gb|EOY32274.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 1 [Theobroma cacao]
          Length = 540

 Score =  379 bits (973), Expect = e-102
 Identities = 195/369 (52%), Positives = 269/369 (72%), Gaps = 13/369 (3%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNT 347
            RCS  +H+ QAH F++   LD D +LL++F+++CS LG  GYAY VF  +  P I++ NT
Sbjct: 12   RCSNLKHVEQAHGFMVRTALDHDEILLSQFIEACSSLGFPGYAYSVFAFNLQPRIYVFNT 71

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFG 527
            +I+ L+ S +A +AL ++  I +   RPD+YSFPF L+AV  L AL+ G QIH+Q V  G
Sbjct: 72   MIKALTLSHSAFEALHVYKSIARAKLRPDSYSFPFALKAVVDLQALRFGTQIHSQTVCAG 131

Query: 528  LCSDIHVATGLIHMYSACNDLSHARLLFDETP-----LKDVVVWNAMVAGHVKLGDVDGA 692
            L ++I+VAT LI MYS+C  +S AR LFD+       ++DV +W+A +AG+ K+GD D A
Sbjct: 132  LNANIYVATALIQMYSSCACVSDARKLFDQLTSVSRSIQDVALWSATIAGYAKVGDPDAA 191

Query: 693  RELFECM------RERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAV 854
             +L E M       E  ++ WTTVIAGYAQM+RP+EAIAVFR+MQL++ ++PDEIA+LAV
Sbjct: 192  WDLLERMPQTQTNAEAVMVCWTTVIAGYAQMDRPNEAIAVFRRMQLEN-VKPDEIAMLAV 250

Query: 855  LSACAQLGAMD--LGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHR 1028
            L+ACA LGA+   LGE +H ++++ G  +++PL NALI+MYAKSG+I KA++VFE+M H+
Sbjct: 251  LTACAHLGAIQFLLGECIHGYIHKHGFNQMIPLKNALIEMYAKSGDICKALQVFENMNHK 310

Query: 1029 SVVTWTTMIAGFAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYF 1208
            +V+TWTT+I+  AFHGLG  AL+MF  MER  V+PND+TFLAVLSAC+H G   LG  +F
Sbjct: 311  TVITWTTIISALAFHGLGTLALQMFSRMERAQVQPNDITFLAVLSACTHAGLVDLGGCFF 370

Query: 1209 NRMSSRYEI 1235
            N MSSRY I
Sbjct: 371  NTMSSRYGI 379


>ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            [Glycine max]
          Length = 580

 Score =  374 bits (961), Expect = e-101
 Identities = 191/359 (53%), Positives = 257/359 (71%), Gaps = 4/359 (1%)
 Frame = +3

Query: 171  CSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTV 350
            C+   H+ Q   F+LTRGLD+D +LLARF+ + + LGL+ YAY VF  +  P I   N V
Sbjct: 71   CTNLSHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRPSIFFYNNV 130

Query: 351  IRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGL 530
            I  LS S    +A+SLF  I+ +G  PD+YSFPFVL+AV  LSA+  GKQIH QA+  GL
Sbjct: 131  IWALSSSNPT-RAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGL 189

Query: 531  CSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFEC 710
             S   V T L+ MYS+C  LS AR LFD    K   +WNAM+AG+ K+G++  AR LFEC
Sbjct: 190  DSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLFEC 249

Query: 711  M--RERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAM 884
            M  ++R+V+SWTT+I+GY Q + P+EAI +FR M L++ ++PDEIA+LAVLSACA LGA+
Sbjct: 250  MPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQN-VQPDEIAILAVLSACADLGAL 308

Query: 885  DLGEWVHSFVNRRG--LYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIA 1058
             LGEW+H+++ +    L K VPL N+LIDMYAKSG+I KA ++F++M+H++++TWTT+I+
Sbjct: 309  QLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVIS 368

Query: 1059 GFAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            G A HG G EAL++F  ME+  VKPN+VT +AVLSACSH+G   LGR  F  M S+Y I
Sbjct: 369  GLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGI 427


>ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            [Fragaria vesca subsp. vesca]
          Length = 518

 Score =  372 bits (954), Expect = e-100
 Identities = 189/357 (52%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
 Frame = +3

Query: 171  CSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTV 350
            C + +HI QAH  ++T GL+      ARF+++CS LG + YA  VF  +  P+I+L NT+
Sbjct: 11   CYSLKHIQQAHGLMVTLGLEE-----ARFIEACSSLGFSSYACSVFTRNPQPNINLYNTM 65

Query: 351  IRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGL 530
            I+ L  S A    +S++  IQ  G RPDTYS P VL+AV  L A+  G+Q+H  ++  GL
Sbjct: 66   IKALPPSDA----ISVYTSIQAAGLRPDTYSVPLVLKAVVRLGAVGIGRQVHCHSIVTGL 121

Query: 531  CSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFEC 710
             + + V T LIHMYS+C  +  AR LFD    +DV +WNAM+AG+ KLG VD AR +FE 
Sbjct: 122  DTHVSVVTALIHMYSSCGSVFDARRLFDGAAFRDVALWNAMIAGYAKLGHVDSARHVFET 181

Query: 711  M--RERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAM 884
            M     NVISWT +IAGYAQ+NRP EAI VFR+MQL + ++PDEIA+LA LSACAQLGA+
Sbjct: 182  MPLNNSNVISWTALIAGYAQVNRPTEAIMVFRRMQLHN-VQPDEIAMLAALSACAQLGAL 240

Query: 885  DLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGF 1064
             LGEW+H+++ + G  ++  L NALIDMYAKSGNI KA++VF S  H++V+TWTTMIAG 
Sbjct: 241  RLGEWIHNYIQKHGFRELSSLNNALIDMYAKSGNIRKALQVFHSTNHKTVITWTTMIAGL 300

Query: 1065 AFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            A HGLG +AL+MF  MER  + PN +TF+A+LSACSH      G  YF+ M SRY I
Sbjct: 301  ALHGLGTQALDMFSQMERAQIAPNHITFIAILSACSHAHLVQTGLRYFDIMVSRYRI 357


>gb|ESW25005.1| hypothetical protein PHAVU_003G000200g [Phaseolus vulgaris]
          Length = 555

 Score =  368 bits (944), Expect = 3e-99
 Identities = 185/358 (51%), Positives = 250/358 (69%), Gaps = 2/358 (0%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNT 347
            RCS   H+ Q   F+LTR LD+D +LLARF+ + + LG   +AY +F H+  P I+L N 
Sbjct: 45   RCSNLSHLQQTQCFMLTRALDKDDILLARFIYASASLGFPSFAYSIFIHNHRPSIYLYNN 104

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFG 527
            +I  LS      +A+SLF  I+ +G RPD+YSFPF L+AV   S L  G QIH+QA+  G
Sbjct: 105  LIWALSSHNPT-RAISLFNAIRLLGLRPDSYSFPFALKAVVSSSFLHVGHQIHSQAILSG 163

Query: 528  LCSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFE 707
              +  +V T LIHMYS+C ++S AR LFD    + V +WNAM+AG+ K+GD+  AR LFE
Sbjct: 164  FITHPNVLTSLIHMYSSCANVSSARKLFDAATFQHVSLWNAMLAGYAKVGDLSNARNLFE 223

Query: 708  CM--RERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGA 881
             M  ++R+V+SWT +I+GY + + P +AI +FR M L   ++PD+IA+LA LSACA LGA
Sbjct: 224  TMPEKDRDVVSWTCLISGYTRTHCPHQAITLFRTM-LVHNVQPDKIAILAALSACADLGA 282

Query: 882  MDLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAG 1061
            ++LG W+HS++ R  L +IV L N+LIDMYAKSG+I KA +VFE ME +++VTWTTMI G
Sbjct: 283  LELGVWIHSYIERHKLPEIVSLCNSLIDMYAKSGDIGKARQVFEGMERKTIVTWTTMIGG 342

Query: 1062 FAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
             A HG+G EALE+F  ME+  VKPN+VTF+ +LSACSH+G   LGR YF  M  R+ I
Sbjct: 343  LALHGMGKEALELFSCMEKAGVKPNEVTFITILSACSHVGLVELGRHYFTCMRKRFGI 400


>ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Capsella rubella]
            gi|482548993|gb|EOA13187.1| hypothetical protein
            CARUB_v10026213mg [Capsella rubella]
          Length = 532

 Score =  359 bits (922), Expect = 1e-96
 Identities = 182/352 (51%), Positives = 251/352 (71%), Gaps = 5/352 (1%)
 Frame = +3

Query: 189  IAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTVIRGLS- 365
            + Q+H  +L  GL+RD+L++A+F+++CS  G   YAY VF H   P+ +L NT+IR LS 
Sbjct: 32   LKQSHCLMLVTGLNRDNLIVAKFIEACSNAGHVRYAYSVFTHQPFPNTYLHNTMIRALSL 91

Query: 366  --QSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGLCSD 539
              +  A   A+S++ +   + C+PDT++FPFVL+    +S +  G+QIH Q V FGL S 
Sbjct: 92   VDEPNANSFAVSVYRKFWALCCKPDTFTFPFVLKIAVRVSDVCFGRQIHGQTVVFGLDSS 151

Query: 540  IHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFECMR- 716
            +HV TG+I MYS+C  L  AR +FDET ++DV VWNA++AG+ K+G++D AR L + M  
Sbjct: 152  VHVVTGIIQMYSSCGGLGDARKVFDETRVRDVNVWNALLAGYGKVGEMDEARVLLDMMPC 211

Query: 717  -ERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMDLG 893
              RNV+SWT VI+GYA+  RP EAI VF++M L + +EPDE+ LLA LSACA L +++LG
Sbjct: 212  WIRNVVSWTCVISGYAKSRRPSEAIEVFQRM-LMENVEPDEVTLLAALSACADLVSLELG 270

Query: 894  EWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFAFH 1073
            E + S+V+ RG+ + V L NA+IDMYAKSGNI KA+EVFE +  R+VVTWTT+I G A H
Sbjct: 271  ERICSYVDHRGMERAVSLNNAVIDMYAKSGNITKALEVFERVNERNVVTWTTIITGLATH 330

Query: 1074 GLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRY 1229
            G G EAL MF+ M +  VKPNDVTF+A+LSACSH+G   LG+  F+ M S+Y
Sbjct: 331  GHGTEALAMFNRMVKAGVKPNDVTFIAILSACSHVGWVYLGKRLFSSMISKY 382


>ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297310281|gb|EFH40705.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 531

 Score =  358 bits (920), Expect = 2e-96
 Identities = 183/354 (51%), Positives = 250/354 (70%), Gaps = 5/354 (1%)
 Frame = +3

Query: 189  IAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTVIRGLS- 365
            + Q+H F++  GL+RD+L +A+F+++CS  G   YAY VF H   P+ +L NT+IR LS 
Sbjct: 31   LKQSHCFMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYLHNTMIRALSL 90

Query: 366  --QSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGLCSD 539
              +  A   A++++ +      +PDT++FPFVL+ V  +S +  G+Q+H QAV FG  S 
Sbjct: 91   VDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSS 150

Query: 540  IHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFECMR- 716
            +HV TGLI MYS+C  L  AR +FDE  ++DV VWNA++AG+ K+G++D AR L E M  
Sbjct: 151  VHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMMPC 210

Query: 717  -ERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMDLG 893
              RN +SWT VI+GYA+  R  EAI VF++M L + ++PDE+ LLAVLSACA LG+++LG
Sbjct: 211  WVRNAVSWTCVISGYARSGRASEAIEVFQRM-LMENVDPDEVTLLAVLSACADLGSLELG 269

Query: 894  EWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFAFH 1073
            E + S+V+ RG+ + V L NA+IDMYAKSGNI KA+EVFES+  R+VVTWTT+I G A H
Sbjct: 270  ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATH 329

Query: 1074 GLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            G G EAL MF  M +  VKPNDVTF+A+LSACSH+G   LG  +FN M S+Y I
Sbjct: 330  GHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGI 383


>ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g56310 gi|10177829|dbj|BAB11258.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332009364|gb|AED96747.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 530

 Score =  353 bits (907), Expect = 6e-95
 Identities = 180/354 (50%), Positives = 250/354 (70%), Gaps = 5/354 (1%)
 Frame = +3

Query: 189  IAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTVIRGLS- 365
            + Q+H +++  GL+RD+L +A+F+++CS  G   YAY VF H   P+ +L NT+IR LS 
Sbjct: 31   LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSL 90

Query: 366  --QSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGLCSD 539
              +  A   A++++ ++  +  +PDT++FPFVL+    +S +  G+QIH Q V FG  S 
Sbjct: 91   LDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150

Query: 540  IHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFECMR- 716
            +HV TGLI MY +C  L  AR +FDE  +KDV VWNA++AG+ K+G++D AR L E M  
Sbjct: 151  VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210

Query: 717  -ERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMDLG 893
              RN +SWT VI+GYA+  R  EAI VF++M L + +EPDE+ LLAVLSACA LG+++LG
Sbjct: 211  WVRNEVSWTCVISGYAKSGRASEAIEVFQRM-LMENVEPDEVTLLAVLSACADLGSLELG 269

Query: 894  EWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFAFH 1073
            E + S+V+ RG+ + V L NA+IDMYAKSGNI KA++VFE +  R+VVTWTT+IAG A H
Sbjct: 270  ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATH 329

Query: 1074 GLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            G G EAL MF+ M +  V+PNDVTF+A+LSACSH+G   LG+  FN M S+Y I
Sbjct: 330  GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383


>ref|XP_006401350.1| hypothetical protein EUTSA_v10015484mg [Eutrema salsugineum]
            gi|557102440|gb|ESQ42803.1| hypothetical protein
            EUTSA_v10015484mg [Eutrema salsugineum]
          Length = 561

 Score =  342 bits (878), Expect = 1e-91
 Identities = 179/354 (50%), Positives = 242/354 (68%), Gaps = 5/354 (1%)
 Frame = +3

Query: 189  IAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNTVIRGLS- 365
            + QAH  ++T GL+RD+L++A+FL +CS  G   YAY VF + + P+ +L N +IR LS 
Sbjct: 51   LKQAHCSMITTGLNRDNLIVAKFLDACSIAGHVRYAYTVFTNQQSPNTYLHNAMIRALSL 110

Query: 366  --QSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVRFGLCSD 539
              +  A   A+S++ +   +  +PDT++FPFVL+ V  LS +  G+QIH Q V FG  S 
Sbjct: 111  FDEPSAHAVAVSVYKKFWALCSKPDTFTFPFVLKIVVRLSDVWLGRQIHCQTVVFGFDSS 170

Query: 540  IHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGARELFECMR- 716
            +HV T LI MY  C  L  AR  FDE  ++DV VWNA++AG+ K+G +D A  L E M  
Sbjct: 171  VHVVTSLIQMYCVCGGLGDARKAFDEMRVRDVNVWNALLAGYGKMGKIDEAWSLLEMMPC 230

Query: 717  -ERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGAMDLG 893
              RN +SWT VI+G+A++ R  EAI VF++M L D +EPDE+ LLA LSACA LG+++ G
Sbjct: 231  WLRNALSWTCVISGFAKIGRASEAIEVFQRMLL-DNVEPDEVTLLAALSACADLGSIEFG 289

Query: 894  EWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAGFAFH 1073
            E + S+V+ RG+ + V + NALIDMYAKSG+I KA+  FES+  R+VVTWTTMI G A H
Sbjct: 290  ERICSYVDHRGMNRAVSMNNALIDMYAKSGDIKKALVEFESLNERNVVTWTTMITGLATH 349

Query: 1074 GLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            GLG EAL MF+ M +  VKPNDVTF+A+LSACSH+G  GLG+  F  M  +Y I
Sbjct: 350  GLGAEALAMFNRMVKAGVKPNDVTFIAILSACSHVGLVGLGKCLFASMRWKYGI 403


>ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
            gi|241927367|gb|EES00512.1| hypothetical protein
            SORBIDRAFT_03g010050 [Sorghum bicolor]
          Length = 506

 Score =  339 bits (870), Expect = 1e-90
 Identities = 187/362 (51%), Positives = 236/362 (65%), Gaps = 6/362 (1%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNT 347
            R ++PRH+ QAHAF+L RG  R   L++  + +  RL           H +    H    
Sbjct: 20   RLTSPRHLLQAHAFLLPRGGHRHPRLVSALILASLRL---------VPHPQQTSDH---- 66

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSA-----LQSGKQIHAQ 512
                         A +L  R+      P  Y     LRA A L +        G Q+H+ 
Sbjct: 67   -------------AAALLRRVH-----PSVY-----LRAAARLPSHLLRRSLLGPQLHSL 103

Query: 513  AVRFG-LCSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDG 689
             +R G + SD HV+  L+ +Y  C  ++ AR +F E  ++DVV WN M+AG+VK GD+  
Sbjct: 104  LLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYVKAGDLAH 163

Query: 690  ARELFECMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACA 869
            ARELF+ M ERNV+SWTTVI GYAQM RP+EA+ VFR+MQ+ +GIEPD +ALL+VLSAC 
Sbjct: 164  ARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQV-EGIEPDGVALLSVLSACG 222

Query: 870  QLGAMDLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTT 1049
             LGA+DLGEWVH FV RRGL + +PLMN++IDMY K G I KAVEVFE ME +SVVTWTT
Sbjct: 223  DLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTT 282

Query: 1050 MIAGFAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRY 1229
            +IAGFA HGLG +A+EMF  MEREN+ PNDVTFLA+LSACSH+G T LGRWYFN M S+Y
Sbjct: 283  LIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQY 342

Query: 1230 EI 1235
             I
Sbjct: 343  RI 344


>ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            [Brachypodium distachyon]
          Length = 500

 Score =  337 bits (863), Expect = 8e-90
 Identities = 183/358 (51%), Positives = 229/358 (63%), Gaps = 2/358 (0%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVFKHSELPDIHLCNT 347
            R  +PRH+ Q HA++L RG  R++ LL+  L +  RL L                     
Sbjct: 19   RLDSPRHLLQTHAYLLPRGGHRNARLLSALLLASLRLPLR-------------------- 58

Query: 348  VIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQS--GKQIHAQAVR 521
                       P AL+L  RI               L A A +  L+   G Q+H+  VR
Sbjct: 59   -----------PHALALLRRIHP----------SLSLNAAAKIPHLRGTLGPQLHSVIVR 97

Query: 522  FGLCSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGAREL 701
             GL SD HV+  LI  Y +C  ++ AR +FD+T  KD+  WN M++G+VK G++  AREL
Sbjct: 98   AGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSGNLACAREL 157

Query: 702  FECMRERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQLGA 881
            F+ M  RNV+SWTTVI  YAQM +P EA+ VFR+MQ+++GIEPD +ALL+VLSAC  LGA
Sbjct: 158  FDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVLSACGDLGA 217

Query: 882  MDLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMIAG 1061
            +DLGEWVH FV RRGL   +PLMNA+IDMY K G + KAVEVFE M+ +SVVTWTT+IAG
Sbjct: 218  VDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIAG 277

Query: 1062 FAFHGLGNEALEMFHWMERENVKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYEI 1235
            FA HGLG EA+EMF  ME ENV PNDVTFLA+LSACSH+G T LGRWYF  M S+Y I
Sbjct: 278  FALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRI 335


>ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355478874|gb|AES60077.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 526

 Score =  336 bits (861), Expect = 1e-89
 Identities = 178/361 (49%), Positives = 250/361 (69%), Gaps = 5/361 (1%)
 Frame = +3

Query: 168  RCSAPRHIAQAHAFVLTRGLDRDSLLLARFLQSCSRLGLAGYAYLVF--KHSELPDIHLC 341
            +C+   H+ Q H F+L   L ++ + L+RF+   + L    Y+Y +F   H+    I + 
Sbjct: 22   QCTTLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVY 81

Query: 342  NTVIRGLSQSGAAPKALSLFARIQQIGCRPDTYSFPFVLRAVAHLSALQSGKQIHAQAVR 521
            N +I  L  S A   A+S+F  ++++G   D+YS P+VL++V  L+    GKQIH   V 
Sbjct: 82   NNIIYALYSSNAK-LAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVV 140

Query: 522  FGLCSDIHVATGLIHMYSACNDLSHARLLFDETPLKDVVVWNAMVAGHVKLGDVDGAREL 701
             GL  ++ V + LI MYS C D+  AR LFDE      V+ NAM+  +VK+GDV  AR+L
Sbjct: 141  TGLDKNVSVCSSLIQMYS-CYDVCSARKLFDEFGGNGCVL-NAMIVAYVKVGDVSNARKL 198

Query: 702  FECM--RERNVISWTTVIAGYAQMNRPDEAIAVFRKMQLKDGIEPDEIALLAVLSACAQL 875
            F+ M  R+++V SWT +I+GY Q + P+EAI +FR+MQL++ ++PDEIA+LAVLSACA L
Sbjct: 199  FDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLEN-VKPDEIAILAVLSACADL 257

Query: 876  GAMDLGEWVHSFVNRRGLYKIVPLMNALIDMYAKSGNIIKAVEVFESMEHRSVVTWTTMI 1055
            GA+ LGEW+H+++ +  L KIVPL N+LIDMYAKSGNI KA+E+FE+M+H++++TWTTMI
Sbjct: 258  GALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMI 317

Query: 1056 AGFAFHGLGNEALEMFHWMEREN-VKPNDVTFLAVLSACSHIGQTGLGRWYFNRMSSRYE 1232
            AG A HGLG EAL +F  ME+E+ VKPN+VTF+A+LSACSH+G   LGR YF  M SRY 
Sbjct: 318  AGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYG 377

Query: 1233 I 1235
            I
Sbjct: 378  I 378