BLASTX nr result

ID: Stemona21_contig00008859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00008859
         (332 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kD...    58   1e-06
gb|EXB54574.1| Signal recognition particle 54 kDa protein [Morus...    56   4e-06
gb|EOY08281.1| Chloroplast signal recognition particle 54 kDa su...    55   7e-06
ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD...    55   7e-06
ref|XP_006481752.1| PREDICTED: signal recognition particle 54 kD...    55   1e-05

>ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Cucumis sativus]
           gi|449482550|ref|XP_004156318.1| PREDICTED: signal
           recognition particle 54 kDa protein, chloroplastic-like
           [Cucumis sativus]
          Length = 572

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/49 (59%), Positives = 32/49 (65%)
 Frame = +1

Query: 184 KNHFTREMWXXXXXXXXXXXXXXXLVVRAEMFGQLTSGLEAAWNKLRGE 330
           +N FTRE+W                VVRAEMFGQLTSGLEAAWNKL+GE
Sbjct: 56  RNLFTREIWGWLHAKTVNTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGE 104


>gb|EXB54574.1| Signal recognition particle 54 kDa protein [Morus notabilis]
          Length = 572

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/49 (55%), Positives = 32/49 (65%)
 Frame = +1

Query: 184 KNHFTREMWXXXXXXXXXXXXXXXLVVRAEMFGQLTSGLEAAWNKLRGE 330
           +N FTRE+W                V+RAEMFGQLTSGLE+AWNKL+GE
Sbjct: 55  RNLFTREIWSWVNSKHVSNKKEMRGVIRAEMFGQLTSGLESAWNKLKGE 103


>gb|EOY08281.1| Chloroplast signal recognition particle 54 kDa subunit [Theobroma
           cacao]
          Length = 571

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/49 (57%), Positives = 31/49 (63%)
 Frame = +1

Query: 184 KNHFTREMWXXXXXXXXXXXXXXXLVVRAEMFGQLTSGLEAAWNKLRGE 330
           +N FTRE+W                VVRAEMFGQLTSGLEAAW KL+GE
Sbjct: 54  RNLFTREIWGWVNSKTVTLRREMRGVVRAEMFGQLTSGLEAAWTKLKGE 102


>ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Vitis vinifera]
           gi|297740127|emb|CBI30309.3| unnamed protein product
           [Vitis vinifera]
          Length = 567

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/49 (55%), Positives = 31/49 (63%)
 Frame = +1

Query: 184 KNHFTREMWXXXXXXXXXXXXXXXLVVRAEMFGQLTSGLEAAWNKLRGE 330
           +N FTRE+W                V+RAEMFGQLTSGLEAAW KL+GE
Sbjct: 50  RNPFTREVWSLVKSKSVSVRRQMPGVIRAEMFGQLTSGLEAAWTKLKGE 98


>ref|XP_006481752.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Citrus sinensis]
          Length = 571

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/51 (58%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +1

Query: 184 KNHFTREMWXXXXXXXXXXXXXXX--LVVRAEMFGQLTSGLEAAWNKLRGE 330
           +N FTRE W                 LVVRAEMFGQLTSGLEAAWNKL+GE
Sbjct: 52  RNLFTRETWGLIDSKSVTIRRNGRRRLVVRAEMFGQLTSGLEAAWNKLKGE 102


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