BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00008841
         (1887 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi...   622   e-175
ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG3...   614   e-173
ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [S...   613   e-173
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR...   613   e-173
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]        612   e-172
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   590   e-166
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   590   e-166
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   578   e-162
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   578   e-162
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   576   e-161
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   575   e-161
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   575   e-161
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   572   e-160
gb|EOY18823.1| Pseudouridine synthase [Theobroma cacao]               572   e-160
gb|ESW26895.1| hypothetical protein PHAVU_003G157400g [Phaseolus...   571   e-160
gb|ESW26894.1| hypothetical protein PHAVU_003G157400g [Phaseolus...   571   e-160
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   568   e-159
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   568   e-159
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   567   e-159
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   566   e-158

>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Setaria
            italica]
          Length = 538

 Score =  622 bits (1603), Expect = e-175
 Identities = 319/506 (63%), Positives = 382/506 (75%), Gaps = 20/506 (3%)
 Frame = +2

Query: 68   ASSPPRAP---KKPRMSSDDDXXXXXXXXXXXXXXXXXXXGQERRPRYKRRKVAIFLGYC 238
            A+SPPR+P   K+P+MSS  D                   G+ RRPRYKRRKVAI LGYC
Sbjct: 3    AASPPRSPPAAKRPKMSSSSDPEADAESTSPSAA------GEPRRPRYKRRKVAILLGYC 56

Query: 239  GAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARAARTDKGVSAAAQVV 418
            GAGYQGMQKNPGARTIEGDLEEAL+ AGAVPEADRA PRRYDWARAARTDKGVSAAAQVV
Sbjct: 57   GAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVV 116

Query: 419  SGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRYVYLLPVFALDPSAH 598
            SGRFY+DPPG + RLN+ L  QI  +GY RVTNSF+AK+FCDRRRY+YLLPVFALDPSAH
Sbjct: 117  SGRFYVDPPGFIDRLNAQLAPQIHAYGYVRVTNSFSAKKFCDRRRYLYLLPVFALDPSAH 176

Query: 599  PDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDGSGS-ADPEIALTSE 775
            PDRE+V+AS G+G+EL +CLECSERGRK  G++GR  KL S   +G+ +  +  +    E
Sbjct: 177  PDREAVMASMGSGSELTKCLECSERGRKVPGVMGREGKLPSPGVNGTDAPVEGTVNTHDE 236

Query: 776  SELCNGIDGK---KDDQEGGTAE---NGVNELKPR---DQEVRV-EEKSLLETPASGVK- 922
            S       G     ++ + G AE   NG +++ P    D +  +  E++ LE  A+  K 
Sbjct: 237  SGSIGAAKGDPTVSEETQAGNAELGSNGASDVVPSGSADADASIGNEENKLEATATEEKV 296

Query: 923  -----EETEKLEQAVRSSEFRYGEKEKERFNAILKRYVGTHNFHNFTTRTKAEDPSARRY 1087
                 E +   E+    S+F Y ++ KERFN ILK YVGTHNFHNFTTRTKAEDP+A+R+
Sbjct: 297  QGMDFENSNGEEKPPTKSDFSYNDEMKERFNRILKYYVGTHNFHNFTTRTKAEDPAAKRF 356

Query: 1088 IISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGPESLMDVALRKDV 1267
            IISF A++VV L+G++F++C VVGQSFMLHQIRKMIGLAV +MRNC PES+ DVA RKDV
Sbjct: 357  IISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDV 416

Query: 1268 SINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMKHIYSHIASMELK 1447
             +NVPTAPEVGLYLDEC+FTSYN+KWKDSHE +SME Y E+ EE K+K+I+ HIA+ME K
Sbjct: 417  KLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYCEEAEEFKVKYIFPHIAAMEHK 476

Query: 1448 EGAVALWLHSLNHRNYPDFRFMETNG 1525
            EGAVALWLHSLNHRNYPDFR+MET G
Sbjct: 477  EGAVALWLHSLNHRNYPDFRYMETAG 502


>ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG38019.1| tRNA
            pseudouridine synthase family protein [Zea mays]
          Length = 561

 Score =  614 bits (1583), Expect = e-173
 Identities = 325/539 (60%), Positives = 394/539 (73%), Gaps = 38/539 (7%)
 Frame = +2

Query: 68   ASSPPRAP---KKPRMSSDDDXXXXXXXXXXXXXXXXXXXGQERRPRYKRRKVAIFLGYC 238
            A+SPP +P   K+P+MSS  D                    Q RRPRYKRRKVAI LGYC
Sbjct: 3    AASPPPSPPHAKRPKMSSSSDPEADAEPTSASAAVEGADPAQ-RRPRYKRRKVAILLGYC 61

Query: 239  GAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARAARTDKGVSAAAQVV 418
            GAGYQGMQKNPGARTIEGDLEEAL+ AGAVPEADR+ PRRYDWARAARTDKGVSAAAQVV
Sbjct: 62   GAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRRYDWARAARTDKGVSAAAQVV 121

Query: 419  SGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRYVYLLPVFALDPSAH 598
            SGRFY+DPPG + RLN+ L  QIR +GY RVTNSFNAK+FCDRRRY+YLLPVFALDPSAH
Sbjct: 122  SGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKFCDRRRYLYLLPVFALDPSAH 181

Query: 599  PDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDG-----SGSADPEIA 763
            PDRE+V+AS G+G+EL +CLECSERGRK  G++GR  KL S  ++G      GS+  E  
Sbjct: 182  PDREAVMASMGSGSELTKCLECSERGRKIPGVMGREGKLPSPGQNGVDAPVEGSSHDESG 241

Query: 764  LTSESELCN---------------GIDGKK--------DDQEGGTAE---NGVNELKPRD 865
               +++ C+               G + K+        D  E   AE   NG +++   D
Sbjct: 242  TLGDAK-CDHTSSDGGNPFAHGEVGSNSKEKPDLPVSGDGTEVANAEMGSNGDSDVVSSD 300

Query: 866  QEVRVEEKSL---LETPASGVKEETEKLEQAV-RSSEFRYGEKEKERFNAILKRYVGTHN 1033
              +  EEK L    E  A G++ E    E+ +   + F Y ++ KERFN ILK Y+GTHN
Sbjct: 301  IYMGNEEKKLPAATENKAQGMESEKSNGEEKLPTKTTFSYTDEVKERFNRILKYYIGTHN 360

Query: 1034 FHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGI 1213
            FHNFTTRTKAEDP+A+R+IISF A++VV L+G++F++C VVGQSFMLHQIRKMIGLAV +
Sbjct: 361  FHNFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAV 420

Query: 1214 MRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQI 1393
            +RNC PES+ DVA RKDV++NVPTAPEVGLYLDEC+FTSYN+KWKDSHE + ME Y+E+ 
Sbjct: 421  IRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVFMEPYSEEA 480

Query: 1394 EELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLAA 1570
            EE K+K+I++HIA+ME KEGAVALWLHSLNHRNYPDFR+MET    A AE   +E++AA
Sbjct: 481  EEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNAGAE---VESIAA 536


>ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [Sorghum bicolor]
            gi|241934333|gb|EES07478.1| hypothetical protein
            SORBIDRAFT_04g032290 [Sorghum bicolor]
          Length = 567

 Score =  613 bits (1581), Expect = e-173
 Identities = 323/540 (59%), Positives = 384/540 (71%), Gaps = 43/540 (7%)
 Frame = +2

Query: 68   ASSPPRAP---KKPRMSSDDDXXXXXXXXXXXXXXXXXXXGQERRPRYKRRKVAIFLGYC 238
            A+SPP +P   K+P+MSS  D                    Q RRPRYKRRKVAI LGYC
Sbjct: 3    AASPPPSPPHAKRPKMSSSSDPEADAEPTSASAAAEGADPAQ-RRPRYKRRKVAILLGYC 61

Query: 239  GAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARAARTDKGVSAAAQVV 418
            GAGYQGMQKNPGARTIEGDLEEAL+ AGAVPEADRA PRRYDWARAARTDKGVSAAAQVV
Sbjct: 62   GAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVV 121

Query: 419  SGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRYVYLLPVFALDPSAH 598
            SGRFY+DPPG + RLN+ L  QIR +GY RVTNSF+AK+FCDRRRY+YLLPVFALDPSAH
Sbjct: 122  SGRFYVDPPGFIDRLNAQLASQIRAYGYVRVTNSFSAKKFCDRRRYLYLLPVFALDPSAH 181

Query: 599  PDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDG-SGSADPEIALTSE 775
            PDRE+V+AS G+G+EL +CLECSERGRK  G++GR  KL S  ++G   SA+  +A   E
Sbjct: 182  PDREAVMASMGSGSELTKCLECSERGRKVPGVMGREGKLPSPGQNGVDASAEGSVASHDE 241

Query: 776  SELCNGIDGKKDDQEGG-------------------------------TAENGVNELKPR 862
            S             +GG                               T  NG  ++ P 
Sbjct: 242  SGTLGDAKCDHTSPDGGNPCAHGEVGSNSKEKLDLPVSGDGTEVANAETGSNGGGDVVPS 301

Query: 863  -DQEVRV--EEKSL----LETPASGVKEETEKLEQAVRS-SEFRYGEKEKERFNAILKRY 1018
             D ++ +  EEK L     E  A G+  E    E+ + + S F Y ++ KERFN ILK Y
Sbjct: 302  ADADIYIGNEEKKLEPVATEEKAQGMDSEKSNGEEKLPTKSAFSYTDEVKERFNRILKYY 361

Query: 1019 VGTHNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIG 1198
            VGTHNFHNFTTRTKAEDP+A+R+IISF A++VV L+G++F++C VVGQSFMLHQIRKMIG
Sbjct: 362  VGTHNFHNFTTRTKAEDPAAKRFIISFGADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIG 421

Query: 1199 LAVGIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEA 1378
            LAV +MRNC PE++ DVA RKDV++NVPTAPEVGLYLDEC+FTSYN+KWKDSHE +SME 
Sbjct: 422  LAVAVMRNCAPETIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEP 481

Query: 1379 YAEQIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLE 1558
            Y E+ EE K+K+I+ HIA+ME KEGAVALWLHSLNHRNYPDFR+MET      AE   ++
Sbjct: 482  YYEEAEEFKVKYIFPHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEPKVGAEVKSID 541


>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
            synthase family protein [Zea mays]
          Length = 562

 Score =  613 bits (1581), Expect = e-173
 Identities = 327/541 (60%), Positives = 393/541 (72%), Gaps = 40/541 (7%)
 Frame = +2

Query: 68   ASSPPRAP---KKPRMSSDDDXXXXXXXXXXXXXXXXXXXGQERRPRYKRRKVAIFLGYC 238
            A+SPP +P   K+P+MSS  D                    Q RRPRYKRRKVAI LGYC
Sbjct: 3    AASPPPSPPHAKRPKMSSSSDPEADAEPTSASAAVEGADPAQ-RRPRYKRRKVAILLGYC 61

Query: 239  GAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARAARTDKGVSAAAQVV 418
            GAGYQGMQKNPGARTIEGDLEEAL+ AGAVPEADR+ PRRYDWARAARTDKGVSAAAQVV
Sbjct: 62   GAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRRYDWARAARTDKGVSAAAQVV 121

Query: 419  SGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRYVYLLPVFALDPSAH 598
            SGRFY+DPPG + RLN+ L  QIR +GY RVTNSFNAK+FCDRRRY+YLLPVFALDPSAH
Sbjct: 122  SGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKFCDRRRYLYLLPVFALDPSAH 181

Query: 599  PDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDG-----SGSADPEIA 763
            PDRE+V+AS G+G+EL +CLECSERGRK  G++GR  KL S  ++G      GS+  E  
Sbjct: 182  PDREAVMASMGSGSELTKCLECSERGRKIPGVMGREGKLPSPGQNGVDAPVEGSSHDESG 241

Query: 764  LTSESELCN--------------GIDGKK--------DDQEGGTAE---NGVNELKPRDQ 868
               +++  +              G + K+        D  E   A+   NG   +   D 
Sbjct: 242  TLGDAKCDHTSSDGNNPFAHGEVGSNSKEKPDLPVSGDRTEVANAKMGSNGDGAVVSSDI 301

Query: 869  EVRVEEKSL----LETPASGVKEETEKL---EQAVRSSEFRYGEKEKERFNAILKRYVGT 1027
             +  EEK L     E  A G+  E+EK+   E+    S F Y ++ KERFN ILK Y+GT
Sbjct: 302  YIGNEEKKLEPAATENKAQGM--ESEKINGEEKLPTKSTFSYTDEVKERFNRILKYYIGT 359

Query: 1028 HNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAV 1207
            HNFHNFTTRTKAEDP+A+R+IISF A++VV L+G++F++C VVGQSFMLHQIRKMIGLAV
Sbjct: 360  HNFHNFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAV 419

Query: 1208 GIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAE 1387
             +MRNC PES+ DVA RKDV++NVPTAPEVGLYLDEC+FTSYN+KWKDSHE +SME Y+E
Sbjct: 420  AVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSE 479

Query: 1388 QIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLA 1567
            + EE K+K+I++HIA+ME KEGAVALWLHSLNHRNYPDFR+MET      AE   +E++A
Sbjct: 480  EAEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNPGAE---VESIA 536

Query: 1568 A 1570
            A
Sbjct: 537  A 537


>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
          Length = 565

 Score =  612 bits (1579), Expect = e-172
 Identities = 325/544 (59%), Positives = 391/544 (71%), Gaps = 43/544 (7%)
 Frame = +2

Query: 68   ASSPPRAP---KKPRMSSDDDXXXXXXXXXXXXXXXXXXXGQERRPRYKRRKVAIFLGYC 238
            A+SPP +P   K+P+MSS  D                    Q RRPRYKRRKVAI LGYC
Sbjct: 3    AASPPPSPPHAKRPKMSSSSDPEADAEPTSASAAVEGADPAQ-RRPRYKRRKVAILLGYC 61

Query: 239  GAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARAARTDKGVSAAAQVV 418
            GAGYQGMQKNPGARTIEGDLEEAL+ AGAVPEADR+ PRRYDWARAARTDKGVSAAAQVV
Sbjct: 62   GAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRRYDWARAARTDKGVSAAAQVV 121

Query: 419  SGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRYVYLLPVFALDPSAH 598
            SGRFY+DPPG + RLN+ L  QIR +GY RVTNSFNAK+FCDRRRY+YLLPVFALDPSAH
Sbjct: 122  SGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKFCDRRRYLYLLPVFALDPSAH 181

Query: 599  PDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDG------------SG 742
            PDRE+V+AS G+G+EL +CLECSERGRK  G++GR  KL S  ++G            SG
Sbjct: 182  PDREAVMASMGSGSELTKCLECSERGRKIPGVMGREGKLPSPGQNGVDAPVEGSSHDESG 241

Query: 743  S-----------------ADPEIALTSESELCNGIDGKKDD----QEGGTAENGVNELKP 859
            +                 A  E+   S+ +    + G + +    + G   +  V     
Sbjct: 242  TLGDAKCDHTSSDGNNPFAHGEVGSNSKEKPDLPVSGDRTEVANAKMGSNGDGAVVSSAD 301

Query: 860  RDQEVRVEEKSL----LETPASGVKEETEKL---EQAVRSSEFRYGEKEKERFNAILKRY 1018
             D  +  EEK L     E  A G+  E+EK+   E+    S F Y ++ KERFN ILK Y
Sbjct: 302  ADIYIGNEEKKLEPAATENKAQGM--ESEKINGEEKLPTKSTFSYTDEVKERFNRILKYY 359

Query: 1019 VGTHNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIG 1198
            +GTHNFHNFTTRTKAEDP+A+R+IISF A++VV L+G++F++C VVGQSFMLHQIRKMIG
Sbjct: 360  IGTHNFHNFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIG 419

Query: 1199 LAVGIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEA 1378
            LAV +MRNC PES+ DVA RKDV++NVPTAPEVGLYLDEC+FTSYN+KWKDSHE +SME 
Sbjct: 420  LAVAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEP 479

Query: 1379 YAEQIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLE 1558
            Y+E+ EE K+K+I++HIA+ME KEGAVALWLHSLNHRNYPDFR+MET      AE   +E
Sbjct: 480  YSEEAEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNPGAE---VE 536

Query: 1559 NLAA 1570
            ++AA
Sbjct: 537  SIAA 540


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  590 bits (1520), Expect = e-166
 Identities = 296/453 (65%), Positives = 354/453 (78%), Gaps = 14/453 (3%)
 Frame = +2

Query: 191  RPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWA 370
            + RYKRRKVAIF  YCG GYQGMQKNPGA+TIEGDLEEAL+++GAVPE DR +P+RYDWA
Sbjct: 14   KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 73

Query: 371  RAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRR 550
            R+ARTDKGVSA  QVVSGRFYIDPPGLV RLNS+LP QIR+FGY RVT SFNAK+FCDRR
Sbjct: 74   RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRR 133

Query: 551  RYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVG---RHPKLSS 721
            RYVYL+PVFALDPS H DRE+V+AS G+GNEL +CLECSERGRK  GLVG   ++ +L +
Sbjct: 134  RYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEA 193

Query: 722  KEEDGSGSADPEIALTSESE--LCNGIDGKKDDQEGGTAENGVNELKPRDQEVRVEEKSL 895
             + +   S++ +  +T + E  L  G D   +++ G   + G+N     +  + V+E+  
Sbjct: 194  VDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEG- 252

Query: 896  LETPASG---------VKEETEKLEQAVRSSEFRYGEKEKERFNAILKRYVGTHNFHNFT 1048
              TP +G          +E+    ++    S F YGEKE+ERFN ILK +VGTHNFHNFT
Sbjct: 253  --TPLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFT 310

Query: 1049 TRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCG 1228
            TRTKAEDP+ARRYIISF A   +V+EG+EF+KC VVGQSFMLHQIRKMIGLAV IMRNC 
Sbjct: 311  TRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCA 370

Query: 1229 PESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKM 1408
            PESL+D AL++DV+INVPTAPEVGLYLDEC FTSYN+KWKD HE LSM+AY ++ +E KM
Sbjct: 371  PESLIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKM 429

Query: 1409 KHIYSHIASMELKEGAVALWLHSLNHRNYPDFR 1507
            K+IYSHIAS E KEG VALWLHSLNHRNYPD R
Sbjct: 430  KYIYSHIASTEQKEGTVALWLHSLNHRNYPDLR 462


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  590 bits (1520), Expect = e-166
 Identities = 296/453 (65%), Positives = 354/453 (78%), Gaps = 14/453 (3%)
 Frame = +2

Query: 191  RPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWA 370
            + RYKRRKVAIF  YCG GYQGMQKNPGA+TIEGDLEEAL+++GAVPE DR +P+RYDWA
Sbjct: 44   KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 103

Query: 371  RAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRR 550
            R+ARTDKGVSA  QVVSGRFYIDPPGLV RLNS+LP QIR+FGY RVT SFNAK+FCDRR
Sbjct: 104  RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRR 163

Query: 551  RYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVG---RHPKLSS 721
            RYVYL+PVFALDPS H DRE+V+AS G+GNEL +CLECSERGRK  GLVG   ++ +L +
Sbjct: 164  RYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEA 223

Query: 722  KEEDGSGSADPEIALTSESE--LCNGIDGKKDDQEGGTAENGVNELKPRDQEVRVEEKSL 895
             + +   S++ +  +T + E  L  G D   +++ G   + G+N     +  + V+E+  
Sbjct: 224  VDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEG- 282

Query: 896  LETPASG---------VKEETEKLEQAVRSSEFRYGEKEKERFNAILKRYVGTHNFHNFT 1048
              TP +G          +E+    ++    S F YGEKE+ERFN ILK +VGTHNFHNFT
Sbjct: 283  --TPLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFT 340

Query: 1049 TRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCG 1228
            TRTKAEDP+ARRYIISF A   +V+EG+EF+KC VVGQSFMLHQIRKMIGLAV IMRNC 
Sbjct: 341  TRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCA 400

Query: 1229 PESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKM 1408
            PESL+D AL++DV+INVPTAPEVGLYLDEC FTSYN+KWKD HE LSM+AY ++ +E KM
Sbjct: 401  PESLIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKM 459

Query: 1409 KHIYSHIASMELKEGAVALWLHSLNHRNYPDFR 1507
            K+IYSHIAS E KEG VALWLHSLNHRNYPD R
Sbjct: 460  KYIYSHIASTEQKEGTVALWLHSLNHRNYPDLR 492


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  578 bits (1491), Expect = e-162
 Identities = 308/511 (60%), Positives = 365/511 (71%), Gaps = 10/511 (1%)
 Frame = +2

Query: 41   TPFSNAATMASSPPRAP----KKPRMSS----DDDXXXXXXXXXXXXXXXXXXXGQERRP 196
            TP S   T   SPPR      K+P+MS+    D+D                      ++ 
Sbjct: 3    TPDSKTTT---SPPRQQEPDLKRPKMSTTTSEDEDAATTTPGDDTTI----------KKQ 49

Query: 197  RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARA 376
            RYKRRK+AIFL YCG GYQGMQKNPGA+TIEGDLEEALF AGAVPE DR IP+RYDWAR+
Sbjct: 50   RYKRRKIAIFLTYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARS 109

Query: 377  ARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRY 556
            ARTDKGVSA  QVVSGRFYIDPPGLV RL+S+L  QIR+FGY RVT SFNAK+FCDRRRY
Sbjct: 110  ARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRY 169

Query: 557  VYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDG 736
            VYL+PVFAL+P +H DRESVLAS G+G+EL +CL+CSERGRK  G VG+    S  +   
Sbjct: 170  VYLIPVFALNPCSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSP 229

Query: 737  SG--SADPEIALTSESELCNGIDGKKDDQEGGTAENGVNELKPRDQEVRVEEKSLLETPA 910
            +   S D +  L SE +    I    +D                + E++ E    +E   
Sbjct: 230  TEIWSNDKDTTLKSEIKEEVSISSNSEDANA-------------NPEIKDEIMVSIE--- 273

Query: 911  SGVKEETEKLEQAVRSSEFRYGEKEKERFNAILKRYVGTHNFHNFTTRTKAEDPSARRYI 1090
            +G  + T+  E+A++ S F YGEKEKERFN IL  Y+G+HNFHNFTTRTKAEDPSA+RYI
Sbjct: 274  NGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYI 333

Query: 1091 ISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGPESLMDVALRKDVS 1270
            ISF+A+  V +EG+EF+KC VVGQSFMLHQIRKMIG+AV IMRNC  ESL+  AL+K+V+
Sbjct: 334  ISFDAKTTVAVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVN 393

Query: 1271 INVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMKHIYSHIASMELKE 1450
            INVPTAPEVGLYLDEC FTSYN+KWKDSHE LSM+ Y E+ EE KMKHIYSHIA+ E KE
Sbjct: 394  INVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMKHIYSHIATTEHKE 453

Query: 1451 GAVALWLHSLNHRNYPDFRFMETNGQCANAE 1543
            G+VALWLHSLNHRNYPD R  + NG    +E
Sbjct: 454  GSVALWLHSLNHRNYPDLRACD-NGDNITSE 483


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus]
          Length = 519

 Score =  578 bits (1490), Expect = e-162
 Identities = 294/472 (62%), Positives = 349/472 (73%), Gaps = 12/472 (2%)
 Frame = +2

Query: 188  RRPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDW 367
            ++ RYKRRKVAIF  YCG GYQGMQKNPGA+TIE DLEEAL+LAGAVPE DR + +RYDW
Sbjct: 48   KKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDW 107

Query: 368  ARAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDR 547
            AR+ARTDKGVSA  QVVSGRFYIDPPG V RLNS+L  QIR+FGY RVT SFNAK+FCDR
Sbjct: 108  ARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDR 167

Query: 548  RRYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVG-RHPKLSSK 724
            RRYVYL+PVFALDP+ H DRESV AS G+ NEL +CLECSERGRK  GL+G R+ ++ + 
Sbjct: 168  RRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTA 227

Query: 725  EEDGSGSADPEIALTSESELCNGI------DGKKDDQEGGTAENGVNELKPRDQEVRVEE 886
              +   S++   A+       NG+          + Q     EN   EL    +     E
Sbjct: 228  ITESDISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSE 287

Query: 887  KSLLETPASGVKEETEKLEQAVRSSE-----FRYGEKEKERFNAILKRYVGTHNFHNFTT 1051
             S  E    G   E    +++V   E     F+YGE+EK RFN ILK YVGTHNFHNFTT
Sbjct: 288  SS--EMSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTT 345

Query: 1052 RTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGP 1231
            RTKAEDP+ARR+I+SF+A  +VV+EG+EF+KC VVGQSFMLHQIRKM+GLAV IMRNC P
Sbjct: 346  RTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAP 405

Query: 1232 ESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMK 1411
            ESL++ AL+KDV+INVPTAPEVGLYLDECLFTSYN+KWKD+HE +SM+AY E  E+ KMK
Sbjct: 406  ESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMK 465

Query: 1412 HIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLA 1567
             IYSHIAS E K+GAVALWLHSLNHRNYPD R ++   + A    + +E  A
Sbjct: 466  QIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDEVAKIAKNASLDMETQA 517


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  576 bits (1485), Expect = e-161
 Identities = 293/472 (62%), Positives = 348/472 (73%), Gaps = 12/472 (2%)
 Frame = +2

Query: 188  RRPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDW 367
            ++ RYKRRKVA F  YCG GYQGMQKNPGA+TIE DLEEAL+LAGAVPE DR + +RYDW
Sbjct: 48   KKQRYKRRKVAXFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDW 107

Query: 368  ARAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDR 547
            AR+ARTDKGVSA  QVVSGRFYIDPPG V RLNS+L  QIR+FGY RVT SFNAK+FCDR
Sbjct: 108  ARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDR 167

Query: 548  RRYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVG-RHPKLSSK 724
            RRYVYL+PVFALDP+ H DRESV AS G+ NEL +CLECSERGRK  GL+G R+ ++ + 
Sbjct: 168  RRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTA 227

Query: 725  EEDGSGSADPEIALTSESELCNGI------DGKKDDQEGGTAENGVNELKPRDQEVRVEE 886
              +   S++   A+       NG+          + Q     EN   EL    +     E
Sbjct: 228  ITESDISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSE 287

Query: 887  KSLLETPASGVKEETEKLEQAVRSSE-----FRYGEKEKERFNAILKRYVGTHNFHNFTT 1051
             S  E    G   E    +++V   E     F+YGE+EK RFN ILK YVGTHNFHNFTT
Sbjct: 288  SS--EMSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTT 345

Query: 1052 RTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGP 1231
            RTKAEDP+ARR+I+SF+A  +VV+EG+EF+KC VVGQSFMLHQIRKM+GLAV IMRNC P
Sbjct: 346  RTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAP 405

Query: 1232 ESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMK 1411
            ESL++ AL+KDV+INVPTAPEVGLYLDECLFTSYN+KWKD+HE +SM+AY E  E+ KMK
Sbjct: 406  ESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMK 465

Query: 1412 HIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLA 1567
             IYSHIAS E K+GAVALWLHSLNHRNYPD R ++   + A    + +E  A
Sbjct: 466  QIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDEVAKIAKNASLDMETQA 517


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
            vinifera]
          Length = 503

 Score =  575 bits (1483), Expect = e-161
 Identities = 302/515 (58%), Positives = 363/515 (70%), Gaps = 22/515 (4%)
 Frame = +2

Query: 89   PKKPRMS-----SDDDXXXXXXXXXXXXXXXXXXXGQERRPRYKRRKVAIFLGYCGAGYQ 253
            PK+P+MS     SDD+                      ++PRYKRRK+AIF  YCG GYQ
Sbjct: 8    PKRPKMSQTTTTSDDEDCDTTTAT--------------KKPRYKRRKIAIFFAYCGVGYQ 53

Query: 254  GMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARAARTDKGVSAAAQVVSGRFY 433
            GMQKNPGA+TIEGDLEEALF +GAVPE DR  P+R+DWAR+ARTDKGVSA  QVVSGRFY
Sbjct: 54   GMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFY 113

Query: 434  IDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRYVYLLPVFALDPSAHPDRES 613
            IDPPGLV RLNS+LP QIR+FG+ RVT SFNAK+FCDRRRYVYL+PVFALDPS+HPDRES
Sbjct: 114  IDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRES 173

Query: 614  VLASTGTGNELARCLECSERGRKAAGLVGRHP---KLS----------SKEEDGSGSADP 754
            VLAS G+ NEL +CLECSERGRK  G++G+     K+S          SK   G+     
Sbjct: 174  VLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKNIVGAAILKS 233

Query: 755  EIALTSESELCNGIDGKKDDQ---EGGTAENGVNELKPRDQEVRVEEKSLLETPASGVKE 925
            E    S +   N  DG    Q   EG   ++        D     + +     P     E
Sbjct: 234  EAKEESMASSDNRHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNE-----PGVSHSE 288

Query: 926  ETEKLEQAV-RSSEFRYGEKEKERFNAILKRYVGTHNFHNFTTRTKAEDPSARRYIISFE 1102
            +++K E  + + S F YG+KE+ERFN IL  YVGTHNFHNFTTR KAEDPSA+R+I+SF+
Sbjct: 289  QSDKGENKLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFD 348

Query: 1103 AEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGPESLMDVALRKDVSINVP 1282
               +V +EG+EF+KC VVGQSFMLHQIRKMIGLAV IMRN  PESL++ AL KDV+INVP
Sbjct: 349  GNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVP 408

Query: 1283 TAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMKHIYSHIASMELKEGAVA 1462
            TAPEVGLYLDEC F+SYN+KW+DSHE +SM+AYAE+ EE KMKH+YSHIA+ E KEG VA
Sbjct: 409  TAPEVGLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVA 468

Query: 1463 LWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLA 1567
            LWLHSLNHRNYPD   +  NG  ++ +  + E +A
Sbjct: 469  LWLHSLNHRNYPDL-CIGDNGAASDGKNGEEETMA 502


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  575 bits (1483), Expect = e-161
 Identities = 296/474 (62%), Positives = 348/474 (73%), Gaps = 14/474 (2%)
 Frame = +2

Query: 188  RRPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDW 367
            ++ RYKRRKVAIF  YCG GYQGMQKNPGA+TIE DLEEAL+LAGAVPE DR + +RYDW
Sbjct: 48   KKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDW 107

Query: 368  ARAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDR 547
            AR+ARTDKGVSA  QVVSGRFYIDPPG V RLNS+L  QIR+FGY RVT SFNAK+FCDR
Sbjct: 108  ARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDR 167

Query: 548  RRYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHP---KLS 718
            RRYVYL+PVFALDP+ H DRESV AS G+ NEL +CLECSERGRK  GL+G+     K +
Sbjct: 168  RRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTA 227

Query: 719  SKEEDGSGSADPEIALTSESELCNGI------DGKKDDQEGGTAENGVNELKPRDQEVRV 880
              E D S +    I ++      NG+          + Q     EN   EL    + +  
Sbjct: 228  ITESDISSNIVNAIEVSDVQ--ANGVLEDSATTSDSNKQTSVLVENTATELTVASEGIAK 285

Query: 881  EEKSLLETPASGVKEETEKLEQAVRSSE-----FRYGEKEKERFNAILKRYVGTHNFHNF 1045
             E S  E    G   E    +++V   E     F+YGE+EK RFN ILK YVGTHNFHNF
Sbjct: 286  SESS--EMSGLGNDSEIVVSKESVNGKEKPSGSFKYGEEEKARFNRILKHYVGTHNFHNF 343

Query: 1046 TTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNC 1225
            TTRTKAEDP+ARR+I+SF+A   VV+EG+EF+KC VVGQSFMLHQIRKM+GLAV IMRNC
Sbjct: 344  TTRTKAEDPAARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNC 403

Query: 1226 GPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELK 1405
             PESL++ AL+KDV+INVPTAPEVGLYLDECLFTSYN+KWKD+HE +SM+AY E  E+ K
Sbjct: 404  APESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFK 463

Query: 1406 MKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLA 1567
            MK IYSHIAS E K+GAVALWLHSLNHRNYPD R ++   + A    + +E  A
Sbjct: 464  MKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDEVAKIAKNTSVDMETQA 517


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  572 bits (1473), Expect = e-160
 Identities = 289/466 (62%), Positives = 348/466 (74%), Gaps = 24/466 (5%)
 Frame = +2

Query: 188  RRPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDW 367
            +R   KRRK+AIF  YCG GYQGMQKNPGA+TIEGDLEEALF +GAV E DR  PRRYDW
Sbjct: 53   KRQLCKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDW 112

Query: 368  ARAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDR 547
            AR+ARTDKGVSA  QVVSGRF IDPPGLV RLNS+LP QIR+FGY RVT SFNAK+FCD+
Sbjct: 113  ARSARTDKGVSAVGQVVSGRFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQ 172

Query: 548  RRYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHP-KLSSK 724
            RRYVYLLPVFALD S+H DRESV+AS G+GNEL +CLECSERGRK  G++G+   +L   
Sbjct: 173  RRYVYLLPVFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLP 232

Query: 725  EEDGSGSADPEIALTSESELCNG---------IDGKKDDQEGGTAENG----VNE----- 850
              D + S + ++ + +    CNG         ++  K   E    EN     VNE     
Sbjct: 233  SNDENASLNSQVKVDTVVSTCNGDRHNTNLESVESNKTISESVMVENANSESVNETLVES 292

Query: 851  -----LKPRDQEVRVEEKSLLETPASGVKEETEKLEQAVRSSEFRYGEKEKERFNAILKR 1015
                 ++  + ++ ++  S  ++     +      E+ ++ S F YGE+EK+RFN ILK 
Sbjct: 293  RTSETVQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKH 352

Query: 1016 YVGTHNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMI 1195
            YVG+HNFHNFTTRTKAEDPSARRYIISF A+ VV +EG++F+KC VVGQSFMLHQIRKMI
Sbjct: 353  YVGSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMI 412

Query: 1196 GLAVGIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSME 1375
            GLAV ++RNC PESL++ AL+KDV+INVPTAPEVGLYLDEC+F SYN+KWKDSHE LSM+
Sbjct: 413  GLAVAVVRNCAPESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMK 472

Query: 1376 AYAEQIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFM 1513
            AY E+ E  KMKHI+SHIA  E KEG VALWLHSLN+RNYPD RF+
Sbjct: 473  AYEEEAENFKMKHIFSHIARTEQKEGVVALWLHSLNYRNYPDLRFL 518


>gb|EOY18823.1| Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  572 bits (1473), Expect = e-160
 Identities = 296/450 (65%), Positives = 336/450 (74%), Gaps = 10/450 (2%)
 Frame = +2

Query: 188  RRPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDW 367
            ++ RYKRRK+AIF  YCG GYQGMQKNPGA+TIEGDLEEALF +GAVPE DR  P+RYDW
Sbjct: 51   KKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDW 110

Query: 368  ARAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDR 547
            AR+ARTDKGVSA  QVVSGRFYIDPPGLV RLN  LP QIR+FGY RVT SFN+K+FCDR
Sbjct: 111  ARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDR 170

Query: 548  RRYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGR-------- 703
            RRYVYL+PVFALDPS H DRESVLAS G+GNEL +CLECSERGRK AG++G+        
Sbjct: 171  RRYVYLIPVFALDPSCHRDRESVLASLGSGNELVKCLECSERGRKVAGVMGKRSFEAKST 230

Query: 704  --HPKLSSKEEDGSGSADPEIALTSESELCNGIDGKKDDQEGGTAENGVNELKPRDQEVR 877
              H  +SS   + SG+   E  LTSE E          +    + +N   E+     +V 
Sbjct: 231  IVHSDVSSNNGE-SGNVIKEHNLTSELE----------EVTDSSVQNEFTEV----DKVN 275

Query: 878  VEEKSLLETPASGVKEETEKLEQAVRSSEFRYGEKEKERFNAILKRYVGTHNFHNFTTRT 1057
            VE+  L E                     F YGE+EK  FN ILK YVG+HNFHNFTTRT
Sbjct: 276  VEKIPLEER-------------------RFCYGEEEKGLFNRILKHYVGSHNFHNFTTRT 316

Query: 1058 KAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGPES 1237
            KAEDPSARRYI+SF A  VV +EG++F+KC VVGQSFMLHQIRKMIG+AV +MRNC PES
Sbjct: 317  KAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRNCAPES 376

Query: 1238 LMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMKHI 1417
            L++ ALRKDVSINVPTAPEVGLYLDECLF SYN+KWKDSHE LSM+AY E+ EE KMK I
Sbjct: 377  LIETALRKDVSINVPTAPEVGLYLDECLFASYNQKWKDSHEELSMKAYEEEAEEFKMKFI 436

Query: 1418 YSHIASMELKEGAVALWLHSLNHRNYPDFR 1507
            YSHIAS E +EG VALWLHSLNHRNYPD R
Sbjct: 437  YSHIASTEREEGVVALWLHSLNHRNYPDLR 466


>gb|ESW26895.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  571 bits (1471), Expect = e-160
 Identities = 294/479 (61%), Positives = 355/479 (74%), Gaps = 25/479 (5%)
 Frame = +2

Query: 191  RPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWA 370
            + RYKRRK+AIF  YCG GYQGMQKNPGA+TIEGDLEEAL+++GAVPE DR IP+RYDWA
Sbjct: 17   KKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWA 76

Query: 371  RAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRR 550
            R+ARTDKGVSA  QVVSGRFYIDPPGLV RLNS+L  QIR+FGY RVT SFNAK+FCDRR
Sbjct: 77   RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRR 136

Query: 551  RYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHP---KLSS 721
            RYVYL+PVFALDP  H DRE+V+AS G+ NEL +CLECSERGRK  GLVG      +L +
Sbjct: 137  RYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEA 196

Query: 722  KEEDGSGSADPEIALTS------ESELCNGIDGKKD-----DQEGGTAENGVNELKPRDQ 868
             + +   S++ ++ L S      E+ L  G D   +     D +G    +G N     ++
Sbjct: 197  MDVEAGISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEK 256

Query: 869  EVRVEEKSLLETPASGVKE------ETEKL---EQAVRSSEFRYGEKEKERFNAILKRYV 1021
             + V+++ +   P +G         E EK+   +++   S F YGEKE+ERFN IL  +V
Sbjct: 257  GIPVQDEVM---PLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFV 313

Query: 1022 GTHNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGL 1201
            GTHNFHNFTTRTKAEDP+ARRYIISF A     +EG+EF+KC VVGQSFMLHQIRKM+GL
Sbjct: 314  GTHNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGL 373

Query: 1202 AVGIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAY 1381
            AV IMRNC PESL++ AL++DV+INVPTAPEVGLYLDEC F+SYN+KWKDSHE LSM+AY
Sbjct: 374  AVAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAY 433

Query: 1382 AEQIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCAN--AEPMQ 1552
             ++ EE KMK+IYSHI+  E KEG VALWLHSLNHRNYPD R +       N  A+P Q
Sbjct: 434  EKEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNKSADPEQ 492


>gb|ESW26894.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  571 bits (1471), Expect = e-160
 Identities = 294/479 (61%), Positives = 355/479 (74%), Gaps = 25/479 (5%)
 Frame = +2

Query: 191  RPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWA 370
            + RYKRRK+AIF  YCG GYQGMQKNPGA+TIEGDLEEAL+++GAVPE DR IP+RYDWA
Sbjct: 47   KKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWA 106

Query: 371  RAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRR 550
            R+ARTDKGVSA  QVVSGRFYIDPPGLV RLNS+L  QIR+FGY RVT SFNAK+FCDRR
Sbjct: 107  RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRR 166

Query: 551  RYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHP---KLSS 721
            RYVYL+PVFALDP  H DRE+V+AS G+ NEL +CLECSERGRK  GLVG      +L +
Sbjct: 167  RYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEA 226

Query: 722  KEEDGSGSADPEIALTS------ESELCNGIDGKKD-----DQEGGTAENGVNELKPRDQ 868
             + +   S++ ++ L S      E+ L  G D   +     D +G    +G N     ++
Sbjct: 227  MDVEAGISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEK 286

Query: 869  EVRVEEKSLLETPASGVKE------ETEKL---EQAVRSSEFRYGEKEKERFNAILKRYV 1021
             + V+++ +   P +G         E EK+   +++   S F YGEKE+ERFN IL  +V
Sbjct: 287  GIPVQDEVM---PLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFV 343

Query: 1022 GTHNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGL 1201
            GTHNFHNFTTRTKAEDP+ARRYIISF A     +EG+EF+KC VVGQSFMLHQIRKM+GL
Sbjct: 344  GTHNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGL 403

Query: 1202 AVGIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAY 1381
            AV IMRNC PESL++ AL++DV+INVPTAPEVGLYLDEC F+SYN+KWKDSHE LSM+AY
Sbjct: 404  AVAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAY 463

Query: 1382 AEQIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFMETNGQCAN--AEPMQ 1552
             ++ EE KMK+IYSHI+  E KEG VALWLHSLNHRNYPD R +       N  A+P Q
Sbjct: 464  EKEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNKSADPEQ 522


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Cicer arietinum]
          Length = 505

 Score =  568 bits (1465), Expect = e-159
 Identities = 298/519 (57%), Positives = 356/519 (68%), Gaps = 6/519 (1%)
 Frame = +2

Query: 29   PKTLTPFSNAATMASSPPRAPKKPRMSSDDDXXXXXXXXXXXXXXXXXXXGQERRPRYKR 208
            P +L+P      +A  P     K   ++ DD                       + RYKR
Sbjct: 8    PSSLSPLPPTPVIAEEPQTKKAKMSTTTSDDEECTAAAGT--------------KVRYKR 53

Query: 209  RKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARAARTD 388
            RKVAI   YCG GYQGMQKNPGA+TIEG++EEAL+++GAVPE DR + +RYDWAR+ARTD
Sbjct: 54   RKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARSARTD 113

Query: 389  KGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRYVYLL 568
            KGVSA  QVVSGRFYIDPPG V RLNS+LP QIR+FGY RVT SF+AK+FCDRRRYVYL+
Sbjct: 114  KGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLI 173

Query: 569  PVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDGSGSA 748
            PVFALDP  H DRE+VLAS G+ NEL +CLECSERGRK  GLVG   +    E     + 
Sbjct: 174  PVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETT 233

Query: 749  DPEIALTSESELCNGIDGKKDDQEGG------TAENGVNELKPRDQEVRVEEKSLLETPA 910
            D      S  E  N  +GK   ++        T  +G +E+ P +         L E   
Sbjct: 234  DKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEKV 293

Query: 911  SGVKEETEKLEQAVRSSEFRYGEKEKERFNAILKRYVGTHNFHNFTTRTKAEDPSARRYI 1090
            +G  E+T       + SEF YGEKE+ERFN ILK YVGTHNFHNFTTR K EDPSA+R+I
Sbjct: 294  NG--EDTP-----AKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFI 346

Query: 1091 ISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGPESLMDVALRKDVS 1270
            ISF+A   VV+EGMEF+KC +VGQSFMLHQIRKM+GLAV IMRNC PESL++ AL+ DVS
Sbjct: 347  ISFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVS 406

Query: 1271 INVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMKHIYSHIASMELKE 1450
            I VPTAPEVGLYLDEC FTSYN+KWKD+HE +SM+AY ++ E+ KMK IYSHIAS E KE
Sbjct: 407  ITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKE 466

Query: 1451 GAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLA 1567
            G V LWLHSLNHRNY D R +E  G  AN +  ++E +A
Sbjct: 467  GTVGLWLHSLNHRNYSDLRVVEEEG-VANEKKSEIEVVA 504


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  568 bits (1464), Expect = e-159
 Identities = 298/486 (61%), Positives = 345/486 (70%), Gaps = 42/486 (8%)
 Frame = +2

Query: 188  RRPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDW 367
            ++ RYKRRK+AIF  YCG GYQGMQKNPGA+TIEGDLEEALF +GAVPE DR  P+RYDW
Sbjct: 47   KKQRYKRRKMAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDW 106

Query: 368  ARAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDR 547
            AR+ARTDKGVSA  QV+SGRFY+DPPGLV RLNS LP QIR+FGY RVT SFNAK+FCDR
Sbjct: 107  ARSARTDKGVSAVGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDR 166

Query: 548  RRYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKE 727
            RRYVYL+PVFALDPS+H DRESVLAS G+G+EL +CLECSERGRK  G VG+    S  E
Sbjct: 167  RRYVYLIPVFALDPSSHRDRESVLASLGSGDELVKCLECSERGRKVIGAVGKRSFESKSE 226

Query: 728  --------------------EDGSGSADPEIALTSESELCNGID-GKKDDQEGGTA---- 832
                                ED S S D    +   SE     +    +D E  +A    
Sbjct: 227  AFQTDILLNGGCAIANCEIKEDISMSMDNAHGVRMHSEFVEQTNVSHNEDSETESAMPRT 286

Query: 833  ------ENGVNELKPRDQEVRVEEKSL-----------LETPASGVKEETEKLEQAVRSS 961
                  E+G  +   + +EV V E +             ++ AS  +E     E  ++ S
Sbjct: 287  DILSNSEDGNVKSDSKQEEVMVSEDAADGGNKESETMEKDSKASVGEERVNGEEHVMKGS 346

Query: 962  EFRYGEKEKERFNAILKRYVGTHNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFI 1141
            EF YGE+EKE+FN ILK YVG+HNFHNFTTRTKAEDPSA+RYIISF+A   V +EG+EF+
Sbjct: 347  EFCYGEEEKEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFV 406

Query: 1142 KCIVVGQSFMLHQIRKMIGLAVGIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECL 1321
            KC V+GQSFMLHQIRKMIGLAV IMRNC PESL+  AL+KDV INVPTAPEVGLYLDEC 
Sbjct: 407  KCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDECF 466

Query: 1322 FTSYNEKWKDSHEVLSMEAYAEQIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPD 1501
            FTSYN+KWKD HE L M+ Y E  E+ KMK+IYSHIAS E KEG V LWLHSLN+RNYPD
Sbjct: 467  FTSYNQKWKD-HEELCMKDYEEVAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPD 525

Query: 1502 FRFMET 1519
             RF  T
Sbjct: 526  LRFCYT 531


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Cicer arietinum]
          Length = 475

 Score =  567 bits (1461), Expect = e-159
 Identities = 290/463 (62%), Positives = 342/463 (73%), Gaps = 6/463 (1%)
 Frame = +2

Query: 197  RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDWARA 376
            RYKRRKVAI   YCG GYQGMQKNPGA+TIEG++EEAL+++GAVPE DR + +RYDWAR+
Sbjct: 20   RYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARS 79

Query: 377  ARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDRRRY 556
            ARTDKGVSA  QVVSGRFYIDPPG V RLNS+LP QIR+FGY RVT SF+AK+FCDRRRY
Sbjct: 80   ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRY 139

Query: 557  VYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHPKLSSKEEDG 736
            VYL+PVFALDP  H DRE+VLAS G+ NEL +CLECSERGRK  GLVG   +    E   
Sbjct: 140  VYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSKRNLELEAMD 199

Query: 737  SGSADPEIALTSESELCNGIDGKKDDQEGG------TAENGVNELKPRDQEVRVEEKSLL 898
              + D      S  E  N  +GK   ++        T  +G +E+ P +         L 
Sbjct: 200  VETTDKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLE 259

Query: 899  ETPASGVKEETEKLEQAVRSSEFRYGEKEKERFNAILKRYVGTHNFHNFTTRTKAEDPSA 1078
            E   +G  E+T       + SEF YGEKE+ERFN ILK YVGTHNFHNFTTR K EDPSA
Sbjct: 260  EEKVNG--EDTP-----AKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSA 312

Query: 1079 RRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMIGLAVGIMRNCGPESLMDVALR 1258
            +R+IISF+A   VV+EGMEF+KC +VGQSFMLHQIRKM+GLAV IMRNC PESL++ AL+
Sbjct: 313  KRFIISFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQ 372

Query: 1259 KDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSMEAYAEQIEELKMKHIYSHIASM 1438
             DVSI VPTAPEVGLYLDEC FTSYN+KWKD+HE +SM+AY ++ E+ KMK IYSHIAS 
Sbjct: 373  TDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIAST 432

Query: 1439 ELKEGAVALWLHSLNHRNYPDFRFMETNGQCANAEPMQLENLA 1567
            E KEG V LWLHSLNHRNY D R +E  G  AN +  ++E +A
Sbjct: 433  EQKEGTVGLWLHSLNHRNYSDLRVVEEEG-VANEKKSEIEVVA 474


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
            sinensis]
          Length = 526

 Score =  566 bits (1458), Expect = e-158
 Identities = 285/466 (61%), Positives = 345/466 (74%), Gaps = 24/466 (5%)
 Frame = +2

Query: 188  RRPRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAGAVPEADRAIPRRYDW 367
            +R   KRRK+AIF  YCG GYQGMQKNPGA+TIEGDLEEALF +GAV E DR  PRRYDW
Sbjct: 53   KRQLCKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDW 112

Query: 368  ARAARTDKGVSAAAQVVSGRFYIDPPGLVARLNSHLPDQIRVFGYSRVTNSFNAKRFCDR 547
            AR+ARTDKGVSA  QVVSGRF IDPPGLV RLN +LP QIR+FGY RVT SFNAK+FCD+
Sbjct: 113  ARSARTDKGVSAVGQVVSGRFCIDPPGLVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQ 172

Query: 548  RRYVYLLPVFALDPSAHPDRESVLASTGTGNELARCLECSERGRKAAGLVGRHP-KLSSK 724
            RRYVYLLPVFALD S+H DRESV+AS G+GNEL +CLECSERGRK  G++G+   +L   
Sbjct: 173  RRYVYLLPVFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLP 232

Query: 725  EEDGSGSADPEIALTSESELCNG---------IDGKKDDQEGGTAENG----VNE----- 850
              D + S + ++ + +    CNG         ++  K   E    EN     VNE     
Sbjct: 233  SNDENASLNSQVKVDTVVSTCNGDRHNTNLESVESNKTISESAMVENANSESVNETLVES 292

Query: 851  -----LKPRDQEVRVEEKSLLETPASGVKEETEKLEQAVRSSEFRYGEKEKERFNAILKR 1015
                 ++  + ++ ++  S  ++     +      E+ ++ S F YGE+EK+RFN ILK 
Sbjct: 293  RTSETVQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKH 352

Query: 1016 YVGTHNFHNFTTRTKAEDPSARRYIISFEAEQVVVLEGMEFIKCIVVGQSFMLHQIRKMI 1195
            YVG+HNFHNFTTRTKAEDPSARRYIISF A+ VV +EG++F+KC VVGQSFMLHQIRKMI
Sbjct: 353  YVGSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMI 412

Query: 1196 GLAVGIMRNCGPESLMDVALRKDVSINVPTAPEVGLYLDECLFTSYNEKWKDSHEVLSME 1375
            GLAV ++RNC P+SL++ AL+KDV+INVPTAPEVGLYLDEC+F SYN+KWKDSHE LSM+
Sbjct: 413  GLAVAVVRNCAPQSLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMK 472

Query: 1376 AYAEQIEELKMKHIYSHIASMELKEGAVALWLHSLNHRNYPDFRFM 1513
            AY E+ E  KMKHI+SHI   E KEG VALWLHSLN+RNYPD  F+
Sbjct: 473  AYEEEAENFKMKHIFSHITRTEQKEGVVALWLHSLNYRNYPDLHFL 518