BLASTX nr result
ID: Stemona21_contig00008018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00008018
(625 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub... 213 5e-53
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 213 5e-53
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 213 5e-53
ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [A... 211 1e-52
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 206 6e-51
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab... 201 1e-49
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 200 3e-49
gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma ca... 199 4e-49
gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma ca... 199 4e-49
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th... 199 4e-49
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th... 199 4e-49
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana... 199 5e-49
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr... 198 9e-49
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 196 3e-48
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza... 196 3e-48
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 195 1e-47
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 194 1e-47
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz... 194 2e-47
gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus pe... 193 3e-47
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 193 4e-47
>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
italica]
Length = 1682
Score = 213 bits (541), Expect = 5e-53
Identities = 112/209 (53%), Positives = 145/209 (69%), Gaps = 3/209 (1%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV+KTSFL++ + LA N +VVL+ + G +N LS NG I LP++L +
Sbjct: 1049 YGEDGVDVLKTSFLNKFKELADNKKVVLDKIKGHKQNQLLSKPNGYITTLPKKLVAEAKE 1108
Query: 186 YVRSLTKNRKN--QRGSL-SVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQM 356
+++ L + + + ++G + + SL +PGE VGV+AAQS+GEPSTQM
Sbjct: 1109 FLKLLKEKKSSDIKKGLMCDIKKKGLMKLLKVKYLYSLVDPGEAVGVVAAQSIGEPSTQM 1168
Query: 357 TLNTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRR 536
TLNTFH AGRGEMNVTLGIPRL+EILM A NI TP+M CPLL+ R+DA +AAKLRR
Sbjct: 1169 TLNTFHLAGRGEMNVTLGIPRLKEILMTASANISTPIMVCPLLEKWTRDDARRVAAKLRR 1228
Query: 537 VTVADVVESMEVCTMPFSIHNHQVSTVYK 623
V VAD+VE +EVCT+PF N VST+YK
Sbjct: 1229 VRVADIVEKIEVCTVPFYNTNGHVSTLYK 1257
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 213 bits (541), Expect = 5e-53
Identities = 112/212 (52%), Positives = 145/212 (68%), Gaps = 6/212 (2%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YG+DGVDV +TSF++E E LA N VV E NG I+ LP+EL++KT
Sbjct: 1057 YGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQD------GKFNGYIQKLPKELRKKTKK 1110
Query: 186 YVRSLTKNR------KNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPS 347
++ + R K Q+ +++ SSLA+PGEPVGV+AAQSVGEPS
Sbjct: 1111 FIEGFMEERQDFDNMKKQKDFVNLVKQKYI--------SSLAQPGEPVGVLAAQSVGEPS 1162
Query: 348 TQMTLNTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAK 527
TQMTLNTFH AGRGE+NVTLGIPRLQEILM A +I+TP+MTCPL GR ++DAE +AAK
Sbjct: 1163 TQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAK 1222
Query: 528 LRRVTVADVVESMEVCTMPFSIHNHQVSTVYK 623
L++VTVAD+ ESMEV +PF++ +HQ ++YK
Sbjct: 1223 LKKVTVADITESMEVSIVPFTVQDHQTCSIYK 1254
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 213 bits (541), Expect = 5e-53
Identities = 112/212 (52%), Positives = 145/212 (68%), Gaps = 6/212 (2%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YG+DGVDV +TSF++E E LA N VV E NG I+ LP+EL++KT
Sbjct: 1128 YGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQD------GKFNGYIQKLPKELRKKTKK 1181
Query: 186 YVRSLTKNR------KNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPS 347
++ + R K Q+ +++ SSLA+PGEPVGV+AAQSVGEPS
Sbjct: 1182 FIEGFMEERQDFDNMKKQKDFVNLVKQKYI--------SSLAQPGEPVGVLAAQSVGEPS 1233
Query: 348 TQMTLNTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAK 527
TQMTLNTFH AGRGE+NVTLGIPRLQEILM A +I+TP+MTCPL GR ++DAE +AAK
Sbjct: 1234 TQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAK 1293
Query: 528 LRRVTVADVVESMEVCTMPFSIHNHQVSTVYK 623
L++VTVAD+ ESMEV +PF++ +HQ ++YK
Sbjct: 1294 LKKVTVADITESMEVSIVPFTVQDHQTCSIYK 1325
>ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
gi|548853779|gb|ERN11762.1| hypothetical protein
AMTR_s00022p00245030 [Amborella trichopoda]
Length = 1600
Score = 211 bits (538), Expect = 1e-52
Identities = 120/209 (57%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 MYGEDGVDVVKTSFLSELEVLATNHRVVLENLS-GQVENAHLSTSNGLIKDLPEELKEKT 179
+YGEDGVDVVKTS+L+E + LA N + + L Q+E+A S + IKDLP+ L+EK
Sbjct: 969 IYGEDGVDVVKTSWLTEFKFLAANKKTLSARLGVHQLEDALPSEYDSYIKDLPDALEEKM 1028
Query: 180 TAYVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXX-SSLAEPGEPVGVIAAQSVGEPSTQM 356
++ L+K + R SL + SSLA+PGE VGVIAAQS+GEPSTQM
Sbjct: 1029 NKFIEKLSKKK---RDSLHLRKLKHFRNLLKLKYFSSLAQPGEAVGVIAAQSIGEPSTQM 1085
Query: 357 TLNTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRR 536
TLNTFHFAG+GEMNVTLGIPRLQEIL AK+ IRTPVMTCPLL R R+DAE +AAKL R
Sbjct: 1086 TLNTFHFAGQGEMNVTLGIPRLQEILGAAKD-IRTPVMTCPLLKQRTRDDAERLAAKLSR 1144
Query: 537 VTVADVVESMEVCTMPFSIHNHQVSTVYK 623
+ ADV+ESM+V +PFS+ N + TVYK
Sbjct: 1145 IKFADVIESMQVHVVPFSVKNGEACTVYK 1173
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 206 bits (523), Expect = 6e-51
Identities = 112/206 (54%), Positives = 139/206 (67%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV +TSF+++ + LA N ++ + GQ L N I +LPE LKEK
Sbjct: 1057 YGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQ-----LGAFNSYISELPEALKEKADR 1111
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
++ + + S V SLA+PGEPVGV+AAQSVGEPSTQMTLN
Sbjct: 1112 FLDDFSI--MGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLN 1169
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEILM A +I+TP+MTCPL +GR EDA+H+A KLR+VTV
Sbjct: 1170 TFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTV 1229
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVYK 623
AD+VESMEV +PF+I + V +YK
Sbjct: 1230 ADIVESMEVSVVPFAIQDGGVCRIYK 1255
>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
Length = 1678
Score = 201 bits (511), Expect = 1e-49
Identities = 104/206 (50%), Positives = 142/206 (68%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV ++SF+ + + LA N +VL+ S + LS +N I DLP LK
Sbjct: 1065 YGEDGVDVHRSSFIEKFKELAINQDMVLQRCSEDM----LSGANSYISDLPISLKNGAEK 1120
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
+V ++ N + S V +SLA+PGEPVGV+AAQSVGEPSTQMTLN
Sbjct: 1121 FVEAMPMNERI--ASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLN 1178
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEILM A +I+TP+MTCPLL G+ +EDA I KLR++TV
Sbjct: 1179 TFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITGKLRKITV 1238
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVYK 623
AD+++SM++ +P++++ ++V +++K
Sbjct: 1239 ADIIKSMDLSVVPYTVYKNEVCSIHK 1264
>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
gi|482559195|gb|EOA23386.1| hypothetical protein
CARUB_v10016563mg [Capsella rubella]
Length = 1651
Score = 200 bits (508), Expect = 3e-49
Identities = 104/206 (50%), Positives = 139/206 (67%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV ++SF+ + + L N +VL+ S + LS S+ I DLP LK+
Sbjct: 1051 YGEDGVDVHRSSFIGKFKELTVNQDMVLQRCSEDM----LSGSSSYISDLPISLKKDAEK 1106
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
+V ++ N + S V SLA+PGEPVGV+AAQSVGEPSTQMTLN
Sbjct: 1107 FVEAMPMNERI--ASKFVRQEELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTLN 1164
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEILM A +I+TP+MTCPLL G+ +EDA I KLR++TV
Sbjct: 1165 TFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKITV 1224
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVYK 623
AD+++ ME+ +P++IH + + +++K
Sbjct: 1225 ADIIKDMELSVVPYTIHKNDICSIHK 1250
>gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
Length = 1397
Score = 199 bits (507), Expect = 4e-49
Identities = 106/207 (51%), Positives = 140/207 (67%)
Frame = +3
Query: 3 MYGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTT 182
+YGEDG+DV +TSF+++ E LA N ++ E L Q L + K LP+ L+ K
Sbjct: 777 IYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQ-----LGEPDDSDKILPDGLRSKAE 831
Query: 183 AYVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTL 362
++R K ++Q+ + SSLA+PGEPVGV+AAQSVGEPSTQMTL
Sbjct: 832 QFIREEIKKYQHQK----IKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 887
Query: 363 NTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVT 542
NTFH AGRGEMNVTLGIPRLQEILM A +IRTPVMTCPL G+ +EDA +A K++++T
Sbjct: 888 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 947
Query: 543 VADVVESMEVCTMPFSIHNHQVSTVYK 623
VAD++ESMEV PF++ N + ++YK
Sbjct: 948 VADILESMEVSVAPFAVDNGDICSIYK 974
>gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
Length = 1400
Score = 199 bits (507), Expect = 4e-49
Identities = 106/207 (51%), Positives = 140/207 (67%)
Frame = +3
Query: 3 MYGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTT 182
+YGEDG+DV +TSF+++ E LA N ++ E L Q L + K LP+ L+ K
Sbjct: 780 IYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQ-----LGEPDDSDKILPDGLRSKAE 834
Query: 183 AYVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTL 362
++R K ++Q+ + SSLA+PGEPVGV+AAQSVGEPSTQMTL
Sbjct: 835 QFIREEIKKYQHQK----IKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 890
Query: 363 NTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVT 542
NTFH AGRGEMNVTLGIPRLQEILM A +IRTPVMTCPL G+ +EDA +A K++++T
Sbjct: 891 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 950
Query: 543 VADVVESMEVCTMPFSIHNHQVSTVYK 623
VAD++ESMEV PF++ N + ++YK
Sbjct: 951 VADILESMEVSVAPFAVDNGDICSIYK 977
>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 199 bits (507), Expect = 4e-49
Identities = 106/207 (51%), Positives = 140/207 (67%)
Frame = +3
Query: 3 MYGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTT 182
+YGEDG+DV +TSF+++ E LA N ++ E L Q L + K LP+ L+ K
Sbjct: 1069 IYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQ-----LGEPDDSDKILPDGLRSKAE 1123
Query: 183 AYVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTL 362
++R K ++Q+ + SSLA+PGEPVGV+AAQSVGEPSTQMTL
Sbjct: 1124 QFIREEIKKYQHQK----IKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 1179
Query: 363 NTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVT 542
NTFH AGRGEMNVTLGIPRLQEILM A +IRTPVMTCPL G+ +EDA +A K++++T
Sbjct: 1180 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 1239
Query: 543 VADVVESMEVCTMPFSIHNHQVSTVYK 623
VAD++ESMEV PF++ N + ++YK
Sbjct: 1240 VADILESMEVSVAPFAVDNGDICSIYK 1266
>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 199 bits (507), Expect = 4e-49
Identities = 106/207 (51%), Positives = 140/207 (67%)
Frame = +3
Query: 3 MYGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTT 182
+YGEDG+DV +TSF+++ E LA N ++ E L Q L + K LP+ L+ K
Sbjct: 1072 IYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQ-----LGEPDDSDKILPDGLRSKAE 1126
Query: 183 AYVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTL 362
++R K ++Q+ + SSLA+PGEPVGV+AAQSVGEPSTQMTL
Sbjct: 1127 QFIREEIKKYQHQK----IKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 1182
Query: 363 NTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVT 542
NTFH AGRGEMNVTLGIPRLQEILM A +IRTPVMTCPL G+ +EDA +A K++++T
Sbjct: 1183 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 1242
Query: 543 VADVVESMEVCTMPFSIHNHQVSTVYK 623
VAD++ESMEV PF++ N + ++YK
Sbjct: 1243 VADILESMEVSVAPFAVDNGDICSIYK 1269
>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
190K chain-like protein [Arabidopsis thaliana]
gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
[Arabidopsis thaliana]
Length = 1670
Score = 199 bits (506), Expect = 5e-49
Identities = 103/206 (50%), Positives = 142/206 (68%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV ++SF+ + + L N +VL+ S + LS ++ I DLP LK+
Sbjct: 1063 YGEDGVDVHRSSFIEKFKELTINQDMVLQKCSEDM----LSGASSYISDLPISLKKGAEK 1118
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
+V ++ N + S V +SLA+PGEPVGV+AAQSVGEPSTQMTLN
Sbjct: 1119 FVEAMPMNERI--ASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLN 1176
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEILM A NI+TP+MTCPLL G+ +EDA I +LR++TV
Sbjct: 1177 TFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLKGKTKEDANDITDRLRKITV 1236
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVYK 623
AD+++SME+ +P++++ ++V +++K
Sbjct: 1237 ADIIKSMELSVVPYTVYENEVCSIHK 1262
>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
gi|557103957|gb|ESQ44311.1| hypothetical protein
EUTSA_v10005738mg [Eutrema salsugineum]
Length = 1697
Score = 198 bits (504), Expect = 9e-49
Identities = 104/206 (50%), Positives = 138/206 (66%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV ++SF+ + L N ++L+ S + LS S+ I DLP LK
Sbjct: 1084 YGEDGVDVHRSSFIGKFRELTVNQDMILQRCSEDM----LSGSSSYITDLPITLKNGAEK 1139
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
+V ++ N + S V +SLA+PGEPVGV+AAQSVGEPSTQMTLN
Sbjct: 1140 FVEAMPMNERI--ASKLVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLN 1197
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEILM A NI+TP+MTCPLL G+ +DA+ I KLR++ V
Sbjct: 1198 TFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLKGKTTDDAKKITDKLRKIAV 1257
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVYK 623
AD+++SMEV +P+++H +V +++K
Sbjct: 1258 ADIIKSMEVSVIPYAVHEGEVCSIHK 1283
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 196 bits (499), Expect = 3e-48
Identities = 108/216 (50%), Positives = 134/216 (62%), Gaps = 10/216 (4%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV +TSFL + L N + + L H N I+ LP+ L EK
Sbjct: 1054 YGEDGVDVHRTSFLKNFKALKNNQETICQKLR------HGCKLNSYIEKLPDGLGEKVKH 1107
Query: 186 YVRSLTKNRKNQRG----------SLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSV 335
+ S TK + + G L SSLA+ GEPVGV+A QSV
Sbjct: 1108 FWESKTKKLEKKLGMLVKKEEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAGQSV 1167
Query: 336 GEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEH 515
GEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILM A E I+TP+MTCP L + + DA+
Sbjct: 1168 GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQS 1227
Query: 516 IAAKLRRVTVADVVESMEVCTMPFSIHNHQVSTVYK 623
+ AK++++TVAD++ESMEV +P SI+NHQVS +YK
Sbjct: 1228 LLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYK 1263
>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
Length = 1830
Score = 196 bits (499), Expect = 3e-48
Identities = 111/232 (47%), Positives = 138/232 (59%), Gaps = 26/232 (11%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV+KTSFL + L+ N R VL+ L + LS NG I +LP +L E
Sbjct: 1111 YGEDGVDVLKTSFLDKFRELSDNRRAVLDKLDSHNDKHLLSNPNGYISELPAKLIENAMK 1170
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
+++ +N++G + SSL +PGE VGV+AAQS+GEPSTQMTLN
Sbjct: 1171 FLK------ENEKGRYDIREEELMKLLKVKYLSSLVDPGEAVGVVAAQSIGEPSTQMTLN 1224
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRM---------------- 497
TFH AGRGE+NVTLGIPRL+EILM A + I TP M CPL+ +
Sbjct: 1225 TFHLAGRGELNVTLGIPRLKEILMTASDKISTPFMKCPLIKTKTRFIPVVIYISLYTCFL 1284
Query: 498 ----------REDAEHIAAKLRRVTVADVVESMEVCTMPFSIHNHQVSTVYK 623
R DAE IAAKLRRV VADV+E +EVCT+PF +N VST+YK
Sbjct: 1285 HFSWSVEYDERNDAERIAAKLRRVHVADVLERIEVCTVPFHNNNGCVSTLYK 1336
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 195 bits (495), Expect = 1e-47
Identities = 105/206 (50%), Positives = 137/206 (66%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV KT+F+++ E LA N ++ EN Q L N I +LP L+EK
Sbjct: 1040 YGEDGVDVHKTAFITKFEALAANQDMLYENSHHQ-----LGKYNVFINELPSALREKGEF 1094
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
SL+K++ V SSLA+PGEPVGV+AAQS+GEPSTQMTLN
Sbjct: 1095 IYNSLSKDKVPGL----VLKEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLN 1150
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEILM A ++I+TP+MTCPL +G + A+ +A KL+++TV
Sbjct: 1151 TFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITV 1210
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVYK 623
AD++ESM V +PFS ++ ++YK
Sbjct: 1211 ADIIESMNVTVVPFSQRKREICSIYK 1236
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 194 bits (494), Expect = 1e-47
Identities = 106/216 (49%), Positives = 134/216 (62%), Gaps = 10/216 (4%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV +TSFL + L N + + L H N I+ LP+ L+EK
Sbjct: 1054 YGEDGVDVHRTSFLKNFKALKNNQETICQKLR------HGRKLNSYIEKLPDGLEEKVKH 1107
Query: 186 YVRSLTKNRKNQRGSL----------SVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSV 335
+ TK + + G L SSLA+ GEPVGV+A QSV
Sbjct: 1108 FWEKRTKKLEKKLGKLVKKEEMVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSV 1167
Query: 336 GEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEH 515
GEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILM A E I+TP++TCP L + + DA+
Sbjct: 1168 GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQS 1227
Query: 516 IAAKLRRVTVADVVESMEVCTMPFSIHNHQVSTVYK 623
+ AK++++TVAD++ESMEV +P SI+NHQVS +YK
Sbjct: 1228 LLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYK 1263
>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
Group]
Length = 1748
Score = 194 bits (493), Expect = 2e-47
Identities = 112/234 (47%), Positives = 139/234 (59%), Gaps = 28/234 (11%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSE-LEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTT 182
YGEDGVDV+KTSFL + L+ N R +L L + L NG I +LPE+L E
Sbjct: 1108 YGEDGVDVLKTSFLDDKFRELSDNRRALLGKLDSHNDKHLLLNPNGYISELPEKLIENAM 1167
Query: 183 AYVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTL 362
+++S ++N++G + SSL +PGE VGV+AAQS+GEPSTQMTL
Sbjct: 1168 EFLKS----KRNEKGRYDIKEKELMKLLKVKYISSLVDPGEAVGVVAAQSIGEPSTQMTL 1223
Query: 363 NTFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDG----------------- 491
NTFH AGRGEMNVTLGIPRL+E+LM A I TP M CPLL+
Sbjct: 1224 NTFHLAGRGEMNVTLGIPRLKELLMTASAKISTPFMKCPLLEDKTWDDDEEEMDDKLKKA 1283
Query: 492 ----------RMREDAEHIAAKLRRVTVADVVESMEVCTMPFSIHNHQVSTVYK 623
R +DAE IAAKLRRV VAD+VE +EVCT+PF +N VST+YK
Sbjct: 1284 RDAERLAAKLRTIDDAERIAAKLRRVRVADIVERIEVCTVPFHNNNGCVSTLYK 1337
>gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 193 bits (491), Expect = 3e-47
Identities = 105/206 (50%), Positives = 132/206 (64%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDG+DV TSF+ + E L N + + Q++ N IKDLP LKEK
Sbjct: 981 YGEDGIDVHMTSFIQKFESLIANKEMFHKKGRRQMDKL-----NPYIKDLPLALKEKAEK 1035
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
+V +L K+ SLA+PGEPVGV+A QSVGEPSTQMTLN
Sbjct: 1036 FVHNLALKEKDHN-----FQEDFLKLMEHKYLCSLAQPGEPVGVLAGQSVGEPSTQMTLN 1090
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEILM A +I+TPVMTCPL GR +E+A+ +A KL+++TV
Sbjct: 1091 TFHLAGRGEMNVTLGIPRLQEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITV 1150
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVYK 623
AD++ESM+V +PF I + Q +YK
Sbjct: 1151 ADIIESMKVTFVPFFIQDGQTCRIYK 1176
>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
gi|557523327|gb|ESR34694.1| hypothetical protein
CICLE_v10004132mg [Citrus clementina]
Length = 1715
Score = 193 bits (490), Expect = 4e-47
Identities = 102/205 (49%), Positives = 135/205 (65%)
Frame = +3
Query: 6 YGEDGVDVVKTSFLSELEVLATNHRVVLENLSGQVENAHLSTSNGLIKDLPEELKEKTTA 185
YGEDGVDV +TSF+S+ + LA N ++ + SGQ L SN I +LP+ LK+
Sbjct: 1097 YGEDGVDVHQTSFISKFDALAANQEMIYKKCSGQ-----LDASNAYIMELPDALKDNAEK 1151
Query: 186 YVRSLTKNRKNQRGSLSVXXXXXXXXXXXXXXSSLAEPGEPVGVIAAQSVGEPSTQMTLN 365
+ N ++ L + SLA+PGEPVG++AAQSVGEPSTQMTLN
Sbjct: 1152 FADKFLSNEMAKQDFLKLVKHKFVL--------SLAQPGEPVGLLAAQSVGEPSTQMTLN 1203
Query: 366 TFHFAGRGEMNVTLGIPRLQEILMNAKENIRTPVMTCPLLDGRMREDAEHIAAKLRRVTV 545
TFH AGRGEMNVTLGIPRLQEIL A ++I+TPV+TCPLL G+ +DA+ +A KL+++TV
Sbjct: 1204 TFHLAGRGEMNVTLGIPRLQEILTIASKDIKTPVITCPLLVGKTEDDAKRLADKLKKITV 1263
Query: 546 ADVVESMEVCTMPFSIHNHQVSTVY 620
AD+V+ + V F+ H+ Q TVY
Sbjct: 1264 ADIVKKISVKVRAFTSHDGQACTVY 1288