BLASTX nr result

ID: Stemona21_contig00007410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00007410
         (261 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, ...   117   2e-24
gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus pe...   115   6e-24
ref|XP_002307930.1| RNA recognition motif-containing family prot...   114   1e-23
ref|XP_004289264.1| PREDICTED: uncharacterized protein LOC101308...   114   2e-23
ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, ...   114   2e-23
gb|ESW33813.1| hypothetical protein PHAVU_001G100900g [Phaseolus...   113   2e-23
ref|XP_002322576.1| RNA recognition motif-containing family prot...   113   3e-23
gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [T...   112   5e-23
ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group] g...   112   7e-23
dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sati...   112   7e-23
ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211...   111   1e-22
ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Cit...   110   3e-22
gb|ABD28657.1| RNA-binding region RNP-1 (RNA recognition motif) ...   110   3e-22
ref|XP_003554083.1| PREDICTED: heterogeneous nuclear ribonucleop...   110   3e-22
ref|XP_003624838.1| RNA-binding protein [Medicago truncatula] gi...   110   3e-22
ref|XP_003624837.1| RNA-binding protein [Medicago truncatula] gi...   110   3e-22
tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays] gi...   109   3e-22
tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea m...   109   3e-22
ref|XP_002878114.1| hypothetical protein ARALYDRAFT_486125 [Arab...   109   3e-22
ref|NP_001149939.1| RNA binding protein [Zea mays] gi|195635617|...   109   3e-22

>ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223531017|gb|EEF32870.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 462

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/87 (65%), Positives = 66/87 (75%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK+TGKPKGFCLFV+K+ ESA+RALEEPHK++EGH+LHCQKAIDGPK  KP    
Sbjct: 265 GPLGLDKLTGKPKGFCLFVYKSAESAKRALEEPHKSFEGHMLHCQKAIDGPKHGKP---- 320

Query: 81  QQGGQPHSGGFGAHYPRNDSTPGLLGG 1
           QQ  Q H     +H+ RN   PG  GG
Sbjct: 321 QQQQQQHYNAQKSHFQRN-GNPGYSGG 346


>gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus persica]
          Length = 498

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/87 (63%), Positives = 67/87 (77%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK+TG+PKGFCLFV+K+ ESA+RALEEPHKN++GHILHCQKAIDGPKP K     
Sbjct: 288 GPLGLDKMTGRPKGFCLFVYKSPESAKRALEEPHKNFDGHILHCQKAIDGPKPVKS---- 343

Query: 81  QQGGQPHSGGFGAHYPRNDSTPGLLGG 1
           Q   Q H     + + RN++ PG +GG
Sbjct: 344 QHPNQHHHKSHNSKFQRNEN-PGYVGG 369


>ref|XP_002307930.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222853906|gb|EEE91453.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 474

 Score =  114 bits (286), Expect = 1e-23
 Identities = 54/79 (68%), Positives = 62/79 (78%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK TGKPKGFCLFV+KTVESA++ALEEPHK++EGHILHCQKA+DGPK  K     
Sbjct: 266 GPLGLDKATGKPKGFCLFVYKTVESAKKALEEPHKSFEGHILHCQKAVDGPKHAKS---- 321

Query: 81  QQGGQPHSGGFGAHYPRND 25
           Q+  Q H     +HY RND
Sbjct: 322 QKPPQQHHNMQSSHYQRND 340


>ref|XP_004289264.1| PREDICTED: uncharacterized protein LOC101308619 [Fragaria vesca
           subsp. vesca]
          Length = 481

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/78 (69%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK TG+PKGFCLFV+K+ ESA+RALEEPHKN++GHILHCQKAIDGPKP K   G 
Sbjct: 281 GPLGLDKATGRPKGFCLFVYKSPESAKRALEEPHKNFDGHILHCQKAIDGPKPVKSHHGN 340

Query: 81  Q--QGGQPHSGGFGAHYP 34
           Q       +SGGFG   P
Sbjct: 341 QHHHNRNKNSGGFGGGAP 358


>ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538696|gb|EEF40297.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 478

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/86 (62%), Positives = 64/86 (74%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK+TGKPKGFCLFV+K+VESA++ALEEPHKN+EGHILHCQKA+DGPK      G 
Sbjct: 267 GPLGLDKLTGKPKGFCLFVYKSVESAKKALEEPHKNFEGHILHCQKAVDGPK-----HGK 321

Query: 81  QQGGQPHSGGFGAHYPRNDSTPGLLG 4
            Q  Q H     +H+ RN +  G  G
Sbjct: 322 SQQQQQHHNVQKSHFQRNGNAGGYSG 347


>gb|ESW33813.1| hypothetical protein PHAVU_001G100900g [Phaseolus vulgaris]
           gi|561035284|gb|ESW33814.1| hypothetical protein
           PHAVU_001G100900g [Phaseolus vulgaris]
          Length = 467

 Score =  113 bits (283), Expect = 2e-23
 Identities = 54/80 (67%), Positives = 63/80 (78%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK+TGKPKGFCLFV+++ ESARRALEEPHK++EGHILHCQKAIDGPKP K     
Sbjct: 257 GPLGLDKLTGKPKGFCLFVYRSAESARRALEEPHKDFEGHILHCQKAIDGPKPGK--LQQ 314

Query: 81  QQGGQPHSGGFGAHYPRNDS 22
           QQ G  ++      Y RND+
Sbjct: 315 QQHGNVNAQAQRTQYQRNDT 334


>ref|XP_002322576.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222867206|gb|EEF04337.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 477

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/87 (63%), Positives = 65/87 (74%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK TGKPKGFCLFV+K+ E A++ALEEPHK++EGH+LHCQKAIDGPKP K     
Sbjct: 269 GPLGLDKATGKPKGFCLFVYKSSEGAKKALEEPHKSFEGHMLHCQKAIDGPKPGK----A 324

Query: 81  QQGGQPHSGGFGAHYPRNDSTPGLLGG 1
           Q+  Q H     +HY RND   G +GG
Sbjct: 325 QKQPQQHHNLQSSHYQRNDG-GGYVGG 350


>gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
           gi|508787062|gb|EOY34318.1| RNA-binding family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508787063|gb|EOY34319.1| RNA-binding family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508787064|gb|EOY34320.1| RNA-binding family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 500

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK +GKPKGF LFV++++ESARRALEEPHKN+EGH+LHCQKAIDGPKP+K G+G 
Sbjct: 285 GPLGLDKQSGKPKGFALFVYRSIESARRALEEPHKNFEGHVLHCQKAIDGPKPNKGGYGG 344

Query: 81  QQGGQPH 61
              G  H
Sbjct: 345 SGSGGHH 351


>ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group]
           gi|255673092|dbj|BAF04586.2| Os01g0265800, partial
           [Oryza sativa Japonica Group]
          Length = 524

 Score =  112 bits (279), Expect = 7e-23
 Identities = 57/94 (60%), Positives = 70/94 (74%), Gaps = 7/94 (7%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDKVTGKPKGF LFV+KT++SA++AL+EPHK +EG +LHCQKAIDGPKP+K G GL
Sbjct: 330 GPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEGVVLHCQKAIDGPKPNKGG-GL 388

Query: 81  -------QQGGQPHSGGFGAHYPRNDSTPGLLGG 1
                    GG+  +GG+GAH   + S PG   G
Sbjct: 389 GGLYGAGTSGGRKGAGGYGAH---SHSLPGAAVG 419


>dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sativa Japonica Group]
           gi|125525303|gb|EAY73417.1| hypothetical protein
           OsI_01299 [Oryza sativa Indica Group]
           gi|125569833|gb|EAZ11348.1| hypothetical protein
           OsJ_01215 [Oryza sativa Japonica Group]
           gi|215712214|dbj|BAG94341.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215766461|dbj|BAG98769.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 490

 Score =  112 bits (279), Expect = 7e-23
 Identities = 57/94 (60%), Positives = 70/94 (74%), Gaps = 7/94 (7%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDKVTGKPKGF LFV+KT++SA++AL+EPHK +EG +LHCQKAIDGPKP+K G GL
Sbjct: 296 GPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEGVVLHCQKAIDGPKPNKGG-GL 354

Query: 81  -------QQGGQPHSGGFGAHYPRNDSTPGLLGG 1
                    GG+  +GG+GAH   + S PG   G
Sbjct: 355 GGLYGAGTSGGRKGAGGYGAH---SHSLPGAAVG 385


>ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
           gi|449503048|ref|XP_004161816.1| PREDICTED:
           uncharacterized protein LOC101228786 [Cucumis sativus]
          Length = 500

 Score =  111 bits (277), Expect = 1e-22
 Identities = 51/80 (63%), Positives = 61/80 (76%), Gaps = 7/80 (8%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKP------- 103
           GPLGLDK+TGKPKGFCLFV+K++ESA++ALEEPHKN+EGH+LHCQKAIDGPKP       
Sbjct: 296 GPLGLDKMTGKPKGFCLFVYKSIESAKKALEEPHKNFEGHVLHCQKAIDGPKPGKAQHQH 355

Query: 102 HKPGFGLQQGGQPHSGGFGA 43
           H P    Q+   P+  G  A
Sbjct: 356 HTPNAPFQRNKNPNYTGGAA 375


>ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Citrus sinensis]
          Length = 474

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/87 (59%), Positives = 63/87 (72%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLG+DK TGKPKGFCLFV+KTV++A++ALEEPHKN+EGHIL+CQKAIDGPKP       
Sbjct: 277 GPLGIDKATGKPKGFCLFVYKTVDAAKKALEEPHKNFEGHILNCQKAIDGPKP------- 329

Query: 81  QQGGQPHSGGFGAHYPRNDSTPGLLGG 1
             G   H      H+ RN+   G +GG
Sbjct: 330 --GKSRHHNAQNPHFQRNEGA-GYVGG 353


>gb|ABD28657.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
           truncatula]
          Length = 490

 Score =  110 bits (274), Expect = 3e-22
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHK 97
           GPLGLDKVTGKPKGFCLFV+K+ ESARRALEEPHK +EGHILHCQKAIDGPKP K
Sbjct: 259 GPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTK 313


>ref|XP_003554083.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoformX1
           [Glycine max] gi|571556680|ref|XP_006604297.1|
           PREDICTED: heterogeneous nuclear ribonucleoprotein
           1-like isoform X2 [Glycine max]
           gi|571556682|ref|XP_006604298.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein 1-like isoform
           X3 [Glycine max]
          Length = 479

 Score =  110 bits (274), Expect = 3e-22
 Identities = 54/80 (67%), Positives = 62/80 (77%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK TGKPKGFCLFV+++ ESARRALEEPHK++EGHILHCQKAIDGPK  K    L
Sbjct: 262 GPLGLDKATGKPKGFCLFVYRSPESARRALEEPHKDFEGHILHCQKAIDGPKAGK----L 317

Query: 81  QQGGQPHSGGFGAHYPRNDS 22
           QQ G  ++    A + RN S
Sbjct: 318 QQHGNVNAQAQRAQFQRNGS 337


>ref|XP_003624838.1| RNA-binding protein [Medicago truncatula]
           gi|355499853|gb|AES81056.1| RNA-binding protein
           [Medicago truncatula]
          Length = 492

 Score =  110 bits (274), Expect = 3e-22
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHK 97
           GPLGLDKVTGKPKGFCLFV+K+ ESARRALEEPHK +EGHILHCQKAIDGPKP K
Sbjct: 259 GPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTK 313


>ref|XP_003624837.1| RNA-binding protein [Medicago truncatula]
           gi|355499852|gb|AES81055.1| RNA-binding protein
           [Medicago truncatula]
          Length = 499

 Score =  110 bits (274), Expect = 3e-22
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHK 97
           GPLGLDKVTGKPKGFCLFV+K+ ESARRALEEPHK +EGHILHCQKAIDGPKP K
Sbjct: 259 GPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTK 313


>tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays]
           gi|414876938|tpg|DAA54069.1| TPA: RNA binding protein
           isoform 2 [Zea mays]
          Length = 454

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 5/91 (5%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPG--- 91
           GPLGLDKVTGKPKGF LFV+KT+ESA++ALEEPHK++EG +LHCQKAIDGPKP+K G   
Sbjct: 260 GPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGPKPNKLGGAG 319

Query: 90  --FGLQQGGQPHSGGFGAHYPRNDSTPGLLG 4
             FG   G      GF  +   + S PG +G
Sbjct: 320 GFFG--AGASSGGKGFAGYGATSHSLPGTVG 348


>tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
          Length = 372

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 5/91 (5%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPG--- 91
           GPLGLDKVTGKPKGF LFV+KT+ESA++ALEEPHK++EG +LHCQKAIDGPKP+K G   
Sbjct: 260 GPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGPKPNKLGGAG 319

Query: 90  --FGLQQGGQPHSGGFGAHYPRNDSTPGLLG 4
             FG   G      GF  +   + S PG +G
Sbjct: 320 GFFG--AGASSGGKGFAGYGATSHSLPGTVG 348


>ref|XP_002878114.1| hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp.
           lyrata] gi|297323952|gb|EFH54373.1| hypothetical protein
           ARALYDRAFT_486125 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  109 bits (273), Expect = 3e-22
 Identities = 53/80 (66%), Positives = 60/80 (75%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPGFGL 82
           GPLGLDK TG+PKGFCLFV+K+ ESA+RALEEPHK +EGHILHCQKAIDGPKP K     
Sbjct: 275 GPLGLDKFTGRPKGFCLFVYKSAESAKRALEEPHKTFEGHILHCQKAIDGPKPGKQ---- 330

Query: 81  QQGGQPHSGGFGAHYPRNDS 22
           Q    PH+      Y RND+
Sbjct: 331 QHHHNPHAHN-NPRYQRNDN 349


>ref|NP_001149939.1| RNA binding protein [Zea mays] gi|195635617|gb|ACG37277.1| RNA
           binding protein [Zea mays]
          Length = 455

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 5/91 (5%)
 Frame = -1

Query: 261 GPLGLDKVTGKPKGFCLFVFKTVESARRALEEPHKNYEGHILHCQKAIDGPKPHKPG--- 91
           GPLGLDKVTGKPKGF LFV+KT+ESA++ALEEPHK++EG +LHCQKAIDGPKP+K G   
Sbjct: 261 GPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGPKPNKLGGAG 320

Query: 90  --FGLQQGGQPHSGGFGAHYPRNDSTPGLLG 4
             FG   G      GF  +   + S PG +G
Sbjct: 321 GFFG--AGASSGGKGFAGYGATSHSLPGTVG 349


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