BLASTX nr result
ID: Stemona21_contig00006080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00006080
(430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004502112.1| PREDICTED: glycine-rich RNA-binding protein ... 66 6e-09
ref|XP_006452643.1| hypothetical protein CICLE_v10009293mg [Citr... 65 9e-09
gb|EXC21514.1| Heterogeneous nuclear ribonucleoprotein 27C [Moru... 64 2e-08
ref|NP_851001.1| RNA recognition motif-containing protein [Arabi... 64 3e-08
ref|XP_002882810.1| RNA recognition motif-containing protein [Ar... 63 4e-08
dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana] 63 5e-08
emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera] 62 6e-08
ref|XP_006474836.1| PREDICTED: heterogeneous nuclear ribonucleop... 62 1e-07
emb|CBI28469.3| unnamed protein product [Vitis vinifera] 62 1e-07
ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleop... 62 1e-07
emb|CBI39777.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ... 61 1e-07
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop... 61 1e-07
gb|EMJ06525.1| hypothetical protein PRUPE_ppa006963mg [Prunus pe... 60 2e-07
ref|XP_003542187.1| PREDICTED: heterogeneous nuclear ribonucleop... 60 2e-07
ref|XP_002300392.2| hypothetical protein POPTR_0001s37920g [Popu... 60 3e-07
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin... 59 5e-07
ref|XP_006857740.1| hypothetical protein AMTR_s00061p00188860 [A... 59 7e-07
gb|EOX93557.1| RNA-binding family protein isoform 5, partial [Th... 59 9e-07
gb|EOX93553.1| RNA-binding family protein isoform 1 [Theobroma c... 59 9e-07
>ref|XP_004502112.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Cicer arietinum]
Length = 368
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FFSK+GKVV+H+II DHTT R +GNMI++ GTQVS+
Sbjct: 120 DELKNFFSKHGKVVEHEIIRDHTTKRSRGFGFVVFDNDKVVDNLLADGNMIDMDGTQVSL 179
Query: 249 VCF 241
VCF
Sbjct: 180 VCF 182
>ref|XP_006452643.1| hypothetical protein CICLE_v10009293mg [Citrus clementina]
gi|557555869|gb|ESR65883.1| hypothetical protein
CICLE_v10009293mg [Citrus clementina]
Length = 247
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/74 (47%), Positives = 43/74 (58%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FFSKYGKV++HQII DH TNR GNMI++AGTQVS+
Sbjct: 121 DELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVSL 180
Query: 249 VCFSLENFQLCPFL 208
+ +S N L +L
Sbjct: 181 IGWSPVNQLLKGYL 194
>gb|EXC21514.1| Heterogeneous nuclear ribonucleoprotein 27C [Morus notabilis]
Length = 352
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/60 (50%), Positives = 36/60 (60%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FFS+YGKVV+HQIIHDH TNR GNM+++AGTQV +
Sbjct: 121 DELKSFFSEYGKVVEHQIIHDHETNRSRGFGFVIFESEEVVDELLSKGNMVDIAGTQVEI 180
>ref|NP_851001.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17065240|gb|AAL32774.1| Unknown protein [Arabidopsis
thaliana] gi|20260060|gb|AAM13377.1| unknown protein
[Arabidopsis thaliana] gi|332641793|gb|AEE75314.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 231
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FF+KYG VV+HQ+I DH TNR GNMI++A TQVS+
Sbjct: 123 DELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVSL 182
Query: 249 VCFSLENFQLCPFLEFF*GTHFRCHN*L-QFDLVRPLSVSI 130
+ LE + + +L +F F L F+LVR L S+
Sbjct: 183 YKWGLEFWFMMTYLSWFQFDIFSLFLSLYTFNLVRILPTSL 223
>ref|XP_002882810.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297328650|gb|EFH59069.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 231
Score = 63.2 bits (152), Expect = 4e-08
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FFSKYG VV+HQ+I DH TNR GNMI++A TQVS
Sbjct: 123 DELKDFFSKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVSF 182
Query: 249 VCFSLENFQLCPFLEFF*GTHFRCH----N*LQFDLVRPLSVSI 130
+ LE + + ++ +F HF + F+LVR L S+
Sbjct: 183 YKWGLELWYMHTYISWF---HFEIFCLFLSLYTFNLVRILPSSL 223
>dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana]
Length = 205
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FF+KYG VV+HQ+I DH TNR GNMI++A TQVS+
Sbjct: 123 DELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVSL 182
Query: 249 VCFSLENFQLCPFLEFF 199
+ LE + + +L +F
Sbjct: 183 YKWGLEFWFMMTYLSWF 199
>emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/67 (47%), Positives = 38/67 (56%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKV +HQII DH TNR GNMI++AGTQVS+
Sbjct: 106 DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVSI 165
Query: 249 VCFSLEN 229
+ +S N
Sbjct: 166 LQWSPRN 172
>ref|XP_006474836.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Citrus
sinensis]
Length = 349
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FFSKYGKV++HQII DH TNR GNMI++AGTQV +
Sbjct: 121 DELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEI 180
>emb|CBI28469.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKVV+H+IIHDH T R NGNMI++ GTQV +
Sbjct: 120 DEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEI 179
>ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKVV+H+IIHDH T R NGNMI++ GTQV +
Sbjct: 120 DEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEI 179
>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKVV+HQII DH TNR GNMI++AGTQV +
Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180
>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis] gi|223538031|gb|EEF39644.1| Heterogeneous
nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYG+VV+HQII DH TNR NGNMI++AGTQV +
Sbjct: 121 DEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEI 180
>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera] gi|147768836|emb|CAN78130.1| hypothetical
protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKVV+HQII DH TNR GNMI++AGTQV +
Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180
>gb|EMJ06525.1| hypothetical protein PRUPE_ppa006963mg [Prunus persica]
Length = 388
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
+E+K FFSKYGKVV+HQII DH TNR GNMI++AGTQV +
Sbjct: 159 EEMKSFFSKYGKVVEHQIIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMAGTQVEI 218
>ref|XP_003542187.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Glycine
max]
Length = 352
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DELK FFSKYGKVV+H+II DHTT R +GNMI++ GTQV +
Sbjct: 120 DELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEI 179
>ref|XP_002300392.2| hypothetical protein POPTR_0001s37920g [Populus trichocarpa]
gi|550349134|gb|EEE85197.2| hypothetical protein
POPTR_0001s37920g [Populus trichocarpa]
Length = 349
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE + FFSK+GKVV+HQII DH TNR NGNMI++AGTQV +
Sbjct: 122 DEFQNFFSKHGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMLSNGNMIDMAGTQVEI 181
>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus] gi|449496860|ref|XP_004160246.1|
PREDICTED: nuclear polyadenylated RNA-binding protein
4-like [Cucumis sativus]
Length = 347
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGK+V+HQII DH TNR GNMI+++GTQV +
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
>ref|XP_006857740.1| hypothetical protein AMTR_s00061p00188860 [Amborella trichopoda]
gi|548861836|gb|ERN19207.1| hypothetical protein
AMTR_s00061p00188860 [Amborella trichopoda]
Length = 354
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/60 (50%), Positives = 32/60 (53%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKVVDHQII DH+TNR GNMI+ TQV V
Sbjct: 127 DEFKNFFSKYGKVVDHQIIRDHSTNRSRGFGFIIFDSEKVVDDLVAKGNMIDFGDTQVEV 186
>gb|EOX93557.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
Length = 233
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKVV+H+II DH T R NGNMI++ GTQV +
Sbjct: 1 DEFKNFFSKYGKVVEHEIIRDHATKRSRGFGFIVFDSEKVVDNMLANGNMIDMEGTQVEI 60
>gb|EOX93553.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508701658|gb|EOX93554.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508701659|gb|EOX93555.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508701660|gb|EOX93556.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 344
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = -2
Query: 429 DELKKFFSKYGKVVDHQIIHDHTTNRPXXXXXXXXXXXXXXXXXXVNGNMIELAGTQVSV 250
DE K FFSKYGKVV+H+II DH T R NGNMI++ GTQV +
Sbjct: 117 DEFKNFFSKYGKVVEHEIIRDHATKRSRGFGFIVFDSEKVVDNMLANGNMIDMEGTQVEI 176