BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00004679
         (2984 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea m...   776   0.0  
ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [S...   773   0.0  
ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron sp...   771   0.0  
ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron sp...   763   0.0  
ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group] g...   762   0.0  
ref|XP_006661163.1| PREDICTED: chloroplastic group IIA intron sp...   753   0.0  
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   720   0.0  
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              719   0.0  
gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative i...   708   0.0  
gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus pe...   705   0.0  
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   691   0.0  
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp...   688   0.0  
gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative i...   681   0.0  
gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative i...   681   0.0  
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp...   678   0.0  
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr...   678   0.0  
ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [A...   677   0.0  
ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron sp...   676   0.0  
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu...   676   0.0  
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...   674   0.0  

>tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
          Length = 964

 Score =  776 bits (2004), Expect = 0.0
 Identities = 452/925 (48%), Positives = 581/925 (62%), Gaps = 32/925 (3%)
 Frame = -3

Query: 2700 FSDQTLARWSLRISSQRSNFPWQEARAVDAA------EAGKTRNGLNDLEFDGGAVNKRL 2539
            F +Q L RWS R  SQR++ PW++ +            AG+      D +  GG  +  L
Sbjct: 78   FEEQALRRWSARAPSQRASVPWEQPQQQSPLPPSLPHRAGRGSGDAGDQKRSGGGSSATL 137

Query: 2538 GLIVEKLNXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPLADGVREREELFDDLGNVEDEE 2359
              IV+                               V + +G  +   + D     +D+ 
Sbjct: 138  RSIVDYF--------------------AGGSSDDEGVRVEEGACDTTAVPDQAAREQDDG 177

Query: 2358 KRKVPIVEKLNVSSYSAKDCVREIDELSDVLSNKENEEKREDLTVKKQNVSSSSTTNVKL 2179
                P    L    +SA    RE       +S    EE+      ++ ++  +S   + L
Sbjct: 178  SHFRPSY-LLGSHPFSAPWIHREESTNDRGVSGPVAEEE------ERLDIRDASDDELGL 230

Query: 2178 VNSSYDKRHSSNISSVRTE----------QNPVQNGSFK---PIEEEH--AEVDGRCGRS 2044
            V+   DK  + N   + T             P  N S+     ++++   +  D    +S
Sbjct: 231  VDE--DKEETDNGEELLTGGLEDEFYDDYATPTMNSSYGVDLSVDKDAYGSRFDRSMMQS 288

Query: 2043 GVSLIVEELRSSLNQMGTDQGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDA 1864
             V+ IV+ LR+S+ +  +D    + LS+++D  +          +G   LPWER+   D 
Sbjct: 289  SVNTIVKTLRNSMEE--SDPNATVELSNAEDFVQK---------LGPALLPWEREEEDDE 337

Query: 1863 EQSR----RRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWRE 1696
              S     RRSNTELAE+SIP+PELRRLR+ A+RMKER+KVG  GVTQ +VE+IH KW+ 
Sbjct: 338  AFSGGRAVRRSNTELAERSIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKV 397

Query: 1695 VEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLAN 1516
             EVVK++ EGPPSL+M+RTH++LE +TGG+VIWRSG S+VLYRGM Y   CVQSY+K   
Sbjct: 398  DEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVLYRGMNYNFQCVQSYAKFIE 457

Query: 1515 TESNH-----NNGALTTDHSNATHGNIVNDTVAASKQLLSNSVASPMNLSEGFTDIYEID 1351
             +S       N+  L+ D  N          + AS+     S+ S  N S   ++ ++ID
Sbjct: 458  IDSGKGVSDANSAVLSHDGHN----------LQASRADGMKSLTSTGNFSLESSETFDID 507

Query: 1350 DLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAA 1171
            + LDQLGPR+KDWSG  P+PVDADLLPGVV GYKPP+R+LPYK + +LRD++MTTLRR A
Sbjct: 508  NFLDQLGPRYKDWSGRGPIPVDADLLPGVVHGYKPPFRVLPYKIKSTLRDKEMTTLRRLA 567

Query: 1170 RSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTL 991
            R  APHFALGRNR+HQGLA AMVKLWEKSAIAKIAIKRG+PNT N+RMAEEIKKLTGG L
Sbjct: 568  RQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGIPNTCNDRMAEEIKKLTGGVL 627

Query: 990  VSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKAS-EIVSNPKSTKSP 814
            +SRNK++IVFYRGNDF+ P +R+VLVEKQ  A  +QDEEELARLKAS  I++ PK  K P
Sbjct: 628  LSRNKEFIVFYRGNDFIAPKVRQVLVEKQEQAITQQDEEELARLKASASIITIPKDIKGP 687

Query: 813  LIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXXX 634
            L+AGTLAET EAK+RWG   + + RE+  + L+L    SL+K                  
Sbjct: 688  LVAGTLAETTEAKSRWGKSVNDKQREEEMKHLSLLKHTSLLKNLKRKLILAKTKVAKAEK 747

Query: 633  XXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWK 454
                VQEFL PAELP DLETVTDEERFL+R++GLKMR+F +LGRREVFDGT+QN+HL WK
Sbjct: 748  ALAKVQEFLTPAELPTDLETVTDEERFLFRRIGLKMRAFLMLGRREVFDGTVQNMHLHWK 807

Query: 453  HRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRP 274
            HRELVKI+V+GKSFAQ KHIAISLEAES GVLISLDKTTKGY II YRGKNY RP +++P
Sbjct: 808  HRELVKIVVRGKSFAQAKHIAISLEAESEGVLISLDKTTKGYVIIFYRGKNYRRPQIMKP 867

Query: 273  KNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQ-MVADEELVTENLDLHIN 97
            +NLLTRRQALARSIELQRREAL HHI +L+ KI  ++SQL Q  VA E+   + L    +
Sbjct: 868  RNLLTRRQALARSIELQRREALKHHISSLQGKISKLQSQLVQTKVASEKHDLKLLQTVED 927

Query: 96   KAFLSDDDMEDEGEEAYLLTYDGSE 22
                SDDD+ED+GEEAYL TY  ++
Sbjct: 928  DFSSSDDDVEDDGEEAYLQTYSSAD 952


>ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
            gi|241923491|gb|EER96635.1| hypothetical protein
            SORBIDRAFT_02g022940 [Sorghum bicolor]
          Length = 962

 Score =  773 bits (1997), Expect = 0.0
 Identities = 458/922 (49%), Positives = 581/922 (63%), Gaps = 29/922 (3%)
 Frame = -3

Query: 2700 FSDQTLARWSLRISSQRSNFPWQEARAV-------DAAEAGKTRNGLNDLEFDGGAVNKR 2542
            F +  L RWS R  SQR++ PW++ +         D+ E+G    G       GG  +  
Sbjct: 78   FEEHALRRWSSRAPSQRASVPWEQPQQQSPSLPHRDSRESG----GAGGRNRSGGGSSAT 133

Query: 2541 LGLIVEKLNXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPLADGVREREELFDDLGNVEDE 2362
            L  IV+                               V   +G  +   +  +    +D+
Sbjct: 134  LRSIVDYFGGVSSNDDG--------------------VGAEEGAWDTTAVQGEAAREQDD 173

Query: 2361 EKRKVPIVEKLNVSSYSAKDCVREIDELSDVLSNK--ENEEKREDLTVKKQNVSSSSTTN 2188
                 P    L  S   +   +   +  SD +S    E EE  +   V    +S      
Sbjct: 174  GSHFRP--SYLLGSQPVSAPWIHGEESTSDRVSGPVAEGEEGMDMSDVSDDELSLEDRDK 231

Query: 2187 VKLVNSSYDKRHSSNISSVRTEQNPVQNGSFK-PIEEEHAEVDGRCGRS----GVSLIVE 2023
             ++ +       SS          P  N S++  +  +     GR  RS     V+ IV+
Sbjct: 232  EEIDDGEELPTGSSEEQLYDDYATPTVNSSYEVDLSADRDSYGGRFDRSMRQGSVNTIVK 291

Query: 2022 ELRSSLNQMGTDQGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDAEQSR--- 1852
             LR S+ +  +D    I LS+++D  +          +G V LPWER+   D   S    
Sbjct: 292  TLRGSMEE--SDPNAAIELSNAEDFVQK---------LGPVLLPWEREEEDDEAFSGGRV 340

Query: 1851 -RRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREVEVVKIK 1675
             RRSNTELAE++IP+PELRRLR+ A+RMKER+KVG  GVTQ +VE+IH KW+  EVVK++
Sbjct: 341  GRRSNTELAERTIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMR 400

Query: 1674 VEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANTESNHNN 1495
             EGPPSL+M+RTH++LE +TGG+VIWRSG S+VLYRGM Y L CVQSY+K   T+S    
Sbjct: 401  FEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVLYRGMNYNLQCVQSYAKSIETDS---- 456

Query: 1494 GALTTDHSNA--THG--NIVNDTVAASKQLLSNSVASPMNLSEGFTDIYEIDDLLDQLGP 1327
            G    D S+A  +HG  N+ +   A +K+L S       N S   ++ ++ID+ LDQLGP
Sbjct: 457  GKEVDDASSAVSSHGGHNLQDSREAGAKRLTSTE-----NFSLESSETFDIDNFLDQLGP 511

Query: 1326 RFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHFA 1147
            R++DWSG  P+PVDADLLPGVV GYKPP+R+LPYK + +LRD++MTTLRR +R  APHFA
Sbjct: 512  RYRDWSGRGPVPVDADLLPGVVHGYKPPFRVLPYKIKSTLRDKEMTTLRRLSRQTAPHFA 571

Query: 1146 LGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDYI 967
            LGRNR+HQGLA AMVKLWEKSAIAKIAIKRGVPNT N+RMAEEIKKLTGG L+SRNK+YI
Sbjct: 572  LGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPNTCNDRMAEEIKKLTGGVLLSRNKEYI 631

Query: 966  VFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKAS-EIVSNPKSTKSPLIAGTLAE 790
            VFYRGNDF+ P +R+VLVEKQ  A  +QDEEELARLKAS  I++ PK  K PL+AGTL E
Sbjct: 632  VFYRGNDFIAPKVRQVLVEKQEQAITQQDEEELARLKASASIITVPKGIKGPLVAGTLTE 691

Query: 789  TVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQEF 610
            T EAK+RWG   + + RE+  + L+L    SL+K                      VQEF
Sbjct: 692  TTEAKSRWGMSLNDKQREEEMKRLSLLKHTSLLKNLKRKLILAKTKVAKAERALAKVQEF 751

Query: 609  LRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKIL 430
            L PAELP DLETVTDEERFL+R++GLKMR+F +LGRREVFDGT+QN+HL WKHRELVKI+
Sbjct: 752  LSPAELPTDLETVTDEERFLFRRIGLKMRAFLMLGRREVFDGTVQNMHLHWKHRELVKII 811

Query: 429  VKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRRQ 250
            V+GKSFAQVKHIAISLEAES GVLISLDKT+KGYAII YRGKNY RP +++P+NLLTRRQ
Sbjct: 812  VRGKSFAQVKHIAISLEAESEGVLISLDKTSKGYAIIFYRGKNYRRPQIMKPRNLLTRRQ 871

Query: 249  ALARSIELQRREALNHHIENLREKIQIMKSQLDQ-MVADEE-----LVTENLDLHINKAF 88
            ALARSIELQRREAL HHI +L+ KI  ++SQL Q  VA E+     L T   DL  +   
Sbjct: 872  ALARSIELQRREALKHHISSLQGKIWKLQSQLVQTKVASEKQDLKLLQTVEDDLSSD--- 928

Query: 87   LSDDDMEDEGEEAYLLTYDGSE 22
              DDD+ED+GEEAYL TY  ++
Sbjct: 929  -DDDDVEDDGEEAYLQTYSSAD 949


>ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Brachypodium distachyon]
          Length = 962

 Score =  771 bits (1992), Expect = 0.0
 Identities = 409/688 (59%), Positives = 502/688 (72%), Gaps = 6/688 (0%)
 Frame = -3

Query: 2067 VDGRCGRSGVSLIVEELRSSLNQMGTDQGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPW 1888
            +D    RS VS IV  LR+S+ + G +  +             + + +    +G+V LPW
Sbjct: 281  IDRSIRRSSVSSIVSTLRNSMEESGPNATIGC-----------SHEEDFVQKLGSVLLPW 329

Query: 1887 ER--DGISDAEQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENI 1714
            ER  D   D  +   RSNTELAEK+IP+PELRRLR+ A+RMKERM++G  GVTQA+V++I
Sbjct: 330  EREDDDAFDGVRQGNRSNTELAEKTIPEPELRRLRDAALRMKERMRIGPGGVTQAIVKSI 389

Query: 1713 HEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQS 1534
            H KW   EVVK++ EGPPSL+M+RTHEILE +TGG VIWRSG S+VLYRGM Y L CVQS
Sbjct: 390  HSKWSVDEVVKMRFEGPPSLNMKRTHEILEDRTGGTVIWRSGRSIVLYRGMNYNLRCVQS 449

Query: 1533 YSKLANTESNHNNGALTTDHSNATHGNIVNDTVAASKQLLSNSVASPMNLSEGFTDIYEI 1354
            Y+K+A  +S+     ++T   +    N+   +     +  S S+ S    S+G T+ ++I
Sbjct: 450  YAKIAEVDSSKKVSDVSTVVPSCVEHNLQKSSADGVNR--STSIVSS---SQGATETFDI 504

Query: 1353 DDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRA 1174
            D  LDQLGPR+KDWSG +P+PVDADLLPGVVP YKPP+R LPY+ + SLRD++MT LRR 
Sbjct: 505  DSFLDQLGPRYKDWSGRSPIPVDADLLPGVVPDYKPPFRQLPYRTKLSLRDKEMTALRRL 564

Query: 1173 ARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGT 994
            AR  APHFALGRNR+HQGLA A+VKLWEKS I KIAIKRGVPNT N+RMAEEIKKLTGG 
Sbjct: 565  ARQTAPHFALGRNREHQGLASAIVKLWEKSTIVKIAIKRGVPNTCNDRMAEEIKKLTGGV 624

Query: 993  LVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKAS-EIVSNPKSTKS 817
            L+SRNK+YI+FYRGNDF+ P IR+VLVE+Q  A  +QD+EELARLKAS  I   P + K+
Sbjct: 625  LISRNKEYIIFYRGNDFMTPKIRQVLVEQQQQAITQQDQEELARLKASASITLIPNALKN 684

Query: 816  PLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXX 637
            P +AGTLAET EA++RWGD  +   R+K R  L LA   SL+K                 
Sbjct: 685  PQVAGTLAETREAESRWGDLINDGRRKKERNHLILAKHTSLLKNMTRKLILAKTKVAKAE 744

Query: 636  XXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGW 457
                 VQEFL PAELP DLETVTDEERFL+R++GLKM++F +LGRREVF GT+QN+HL W
Sbjct: 745  MALAKVQEFLSPAELPTDLETVTDEERFLFRRIGLKMKAFLMLGRREVFAGTVQNMHLHW 804

Query: 456  KHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLR 277
            KHRELVKI+VKGKSFAQVKHIAISLEAESGGVLISLDKTTKGY+II+YRGKNY RP +L+
Sbjct: 805  KHRELVKIIVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYSIIVYRGKNYKRPQILK 864

Query: 276  PKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQM-VADEELVTENLDLHI 100
            P+NLLTRR+A+ARSIELQRREALNHHI  LR+KI  +KSQL QM VA  +   + L    
Sbjct: 865  PRNLLTRRRAMARSIELQRREALNHHISILRQKIWKLKSQLAQMRVAGGKQDADLLQTVE 924

Query: 99   NKAFLSDDDMEDEGEEAYLLTY--DGSE 22
            +     DDD+EDEG+EAYL TY  DG +
Sbjct: 925  DDLSSDDDDIEDEGDEAYLQTYISDGED 952


>ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Setaria italica]
          Length = 963

 Score =  763 bits (1969), Expect = 0.0
 Identities = 425/764 (55%), Positives = 526/764 (68%), Gaps = 7/764 (0%)
 Frame = -3

Query: 2292 EIDELSDVLSNKENEEKREDLTVKKQNVSSSSTTNVKLVNSSYDKRHSSNISSVRTEQNP 2113
            E+D   D+L+    EE  ED  V+  N    S+  V LV         SN+         
Sbjct: 236  ELDSAEDLLNGSSEEELYEDYAVQIAN----SSYGVDLVVD-----RGSNV--------- 277

Query: 2112 VQNGSFKPIEEEHAEVDGRCGRSGVSLIVEELRSSLNQMGTDQGVRIYLSDSDDEQEPNS 1933
               G F          D    RS V+ IV+ LRSS+ +  +   V I  S+++D  +   
Sbjct: 278  ---GGF----------DRSMRRSSVNSIVKTLRSSMEE--SSPNVTIERSNAEDFVQK-- 320

Query: 1932 DRNAANLMGTVSLPWER----DGISDAEQSRRRSNTELAEKSIPDPELRRLRNVAIRMKE 1765
                   +G V LPWER    D +    ++ RRSNTELAE++IP+ ELRRLR+ A+RMKE
Sbjct: 321  -------LGPVLLPWEREEEDDEVFGGGKAGRRSNTELAERTIPENELRRLRDAALRMKE 373

Query: 1764 RMKVGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGS 1585
            R+KVG+ GVTQ +VE+IH KW+  EVVK++ EGPPSL+M+RTH++LE +TGG+VIWRSG 
Sbjct: 374  RIKVGSGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGIVIWRSGR 433

Query: 1584 SLVLYRGMTYELPCVQSYSKLANTESNHNNGALTTDHSNATHGNIVNDTVAASKQLLSNS 1405
            S+VLYRGM Y L CVQSY+K    +S+        D ++A HG   N   + +  +  ++
Sbjct: 434  SVVLYRGMNYNLQCVQSYAKSTQIDSDKE----VADANSAIHGRH-NLQKSRADGVKHST 488

Query: 1404 VASPMNLSEGFTDIYEIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPY 1225
             +   +L    T+ ++ID  LDQLGPR+KDWSG +P+PVDADLLPGVVPGYK PYR+LPY
Sbjct: 489  SSGNFSLELEATEAFDIDSFLDQLGPRYKDWSGRSPIPVDADLLPGVVPGYKQPYRVLPY 548

Query: 1224 KARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPN 1045
            K + +LRD++MT LRR AR  APHFALGRNR+HQGLA AMVKLWEKSAIAKIAIKRGVPN
Sbjct: 549  KIKSTLRDKEMTALRRLARQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPN 608

Query: 1044 THNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELA 865
            T N+RMAEEIKKLTGG L+SRNK+YI+FYRGNDF+ P +R+VLVEKQ  A  + DEEELA
Sbjct: 609  TCNDRMAEEIKKLTGGVLLSRNKEYIIFYRGNDFIAPKVRQVLVEKQEQAITQLDEEELA 668

Query: 864  RLKAS-EIVSNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIK 688
            RLKAS  I + P   K PL+AGTLAET EAK+RWG   + + RE+  + L L    SL+K
Sbjct: 669  RLKASASITTIPNELKGPLVAGTLAETTEAKSRWGHSLNDKQREEEMKYLALMKHASLLK 728

Query: 687  YFXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLL 508
                                  VQ+FL PAELP DLETVTDEERFL+R++GLKMR+F +L
Sbjct: 729  SLKRKLILAKTKIAKAERALAKVQQFLSPAELPTDLETVTDEERFLFRRIGLKMRAFLML 788

Query: 507  GRREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGY 328
            GRR+VFDGT+QN+HL WKHREL+KI+V+GKSFAQVKHIAISLEAES GVLIS+DKTTKGY
Sbjct: 789  GRRDVFDGTVQNMHLHWKHRELIKIIVRGKSFAQVKHIAISLEAESEGVLISVDKTTKGY 848

Query: 327  AIIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQ 148
            AII YRGKNY RP +++P+NLLTRRQALARSIELQRREAL HHI +L+ KI  + +QL Q
Sbjct: 849  AIIFYRGKNYRRPQIVKPRNLLTRRQALARSIELQRREALKHHISSLQGKIWKLNTQLVQ 908

Query: 147  MVADEELVTENLDLHINKAFLS--DDDMEDEGEEAYLLTYDGSE 22
            M    E     L L   +A LS  DDD+EDEGEEAYL TY   E
Sbjct: 909  MKEAMEKEDVKL-LQTVEADLSSDDDDVEDEGEEAYLQTYSSDE 951


>ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
            gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa
            Japonica Group] gi|50726191|dbj|BAD33710.1| putative CRS1
            [Oryza sativa Japonica Group]
            gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa
            Japonica Group] gi|125591023|gb|EAZ31373.1| hypothetical
            protein OsJ_15500 [Oryza sativa Japonica Group]
          Length = 947

 Score =  762 bits (1967), Expect = 0.0
 Identities = 407/674 (60%), Positives = 493/674 (73%), Gaps = 2/674 (0%)
 Frame = -3

Query: 2049 RSGVSLIVEELRSSLNQMGTDQGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGIS 1870
            RS V+ IV  +R+S+ +   +  +           E     +    +G V LPWER+G  
Sbjct: 277  RSSVNSIVNTMRNSMEESSRNAAI-----------ECPETEDFVQKLGPVLLPWEREG-- 323

Query: 1869 DAEQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREVE 1690
            D ++ R+RSNTELAE++IP+ ELRRLR+VA+RMKERM+VG  GVTQ +VE+IH+KWR  E
Sbjct: 324  DVDRPRKRSNTELAERTIPEHELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEE 383

Query: 1689 VVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANTE 1510
            VVK++ EGPPSL+M+RTH+ILE +TGG+VIWRSG S+VLYRGM Y L CVQSY++   TE
Sbjct: 384  VVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVLYRGMNYNLRCVQSYTQ--TTE 441

Query: 1509 SNHNNGALTTDHSNATHGNIVNDTVAASKQLLSNSVASPMNLSEGFTDIYEIDDLLDQLG 1330
             N +        SN+     V      S     N  A  +N SE  T+ ++ID  LDQLG
Sbjct: 442  VNFDKRV----SSNSVEPIHVEHKFQKSGADGLNRSAYIVNSSEKPTETFDIDSFLDQLG 497

Query: 1329 PRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHF 1150
            PR+KDWSG  P+PVDADLLPGVVPGYK P+RLLPY  + +LR+++MT LRR AR  APHF
Sbjct: 498  PRYKDWSGRGPIPVDADLLPGVVPGYKTPFRLLPYMVKSTLRNKEMTALRRLARQTAPHF 557

Query: 1149 ALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDY 970
            ALGRNR+HQGLA A+VKLWEKS+IAKIAIKRGVPNT N+RMAEEI+KLTGG L+SRNK+Y
Sbjct: 558  ALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEEIRKLTGGVLLSRNKEY 617

Query: 969  IVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKASEIVS-NPKSTKSPLIAGTLA 793
            IVFYRGNDF+ P +R+VLVEKQ  A   QDEEELARLKAS  +S  PK  K+P +AGTLA
Sbjct: 618  IVFYRGNDFITPKVRQVLVEKQEQAITWQDEEELARLKASASISVKPKVFKNPPVAGTLA 677

Query: 792  ETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQE 613
            ET EAK+RWGD  + E R+K +  + L    SL++                      VQE
Sbjct: 678  ETREAKSRWGDSINAELRKKEKNHMILTKHTSLLRNLKRKLILAKTKVIKAEKALAKVQE 737

Query: 612  FLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKI 433
            FL PAELP DLETVTDEERFL R++GLKM++F +LGRREVFDGT+QN+HL WKHRELVK+
Sbjct: 738  FLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKV 797

Query: 432  LVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRR 253
            LVKGKSF QVKHIAISLEAESGGVLIS+DKTTKGYAII+YRGKNY  P +L+P+NLL+RR
Sbjct: 798  LVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGKNYKTPQILKPRNLLSRR 857

Query: 252  QALARSIELQRREALNHHIENLREKIQIMKSQLDQM-VADEELVTENLDLHINKAFLSDD 76
            +ALARSIELQRRE LNHHI NLR+KI  +KSQL +M VA E+   E L          DD
Sbjct: 858  KALARSIELQRREGLNHHISNLRDKIWKLKSQLVRMQVAGEKPDAELLQTVEADLSKDDD 917

Query: 75   DMEDEGEEAYLLTY 34
             +EDEGEEAYL TY
Sbjct: 918  KIEDEGEEAYLQTY 931


>ref|XP_006661163.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Oryza brachyantha]
          Length = 758

 Score =  753 bits (1943), Expect = 0.0
 Identities = 406/676 (60%), Positives = 495/676 (73%), Gaps = 7/676 (1%)
 Frame = -3

Query: 2040 VSLIVEELRSSLNQMGTDQGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDA- 1864
            +S IV  LR+S+ +   +     +    D  QE          +G V LPWER+   +A 
Sbjct: 91   ISSIVSTLRNSMEESSRNAATE-WPETQDFVQE----------LGPVLLPWEREEDKEAS 139

Query: 1863 ---EQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREV 1693
               ++ R+RSNTELAE++IP+PELRRLR+VA+RMKERM+VG  GVTQ +VE+IH+KWR  
Sbjct: 140  SGVDRPRKRSNTELAERTIPEPELRRLRDVALRMKERMRVGPGGVTQVLVESIHQKWRVD 199

Query: 1692 EVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANT 1513
            EV K++ EGPPSL+M+RTH+ILE +TGG+VIWRSG S+VLYRGM Y L CVQSY+K A  
Sbjct: 200  EVAKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVLYRGMNYNLRCVQSYTKTA-- 257

Query: 1512 ESNHNNGALTTDHSNATHG-NIVNDTVAASKQLLSNSVASPMNLSEGFTDIYEIDDLLDQ 1336
            E N +   +  +H     G N +N +          SV+S    S+  T+ ++ID  LDQ
Sbjct: 258  EVNSDIEPIHVEHKFQKSGANGLNHS--------GYSVSS----SKKPTETFDIDSFLDQ 305

Query: 1335 LGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAP 1156
            LGPR+KDWSG  P+PVDADLLPGVV GY  P+RLLPYK + +LR+++MT LRR AR   P
Sbjct: 306  LGPRYKDWSGRGPIPVDADLLPGVVHGYNTPFRLLPYKVKSTLRNKEMTALRRLARQTTP 365

Query: 1155 HFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNK 976
            HFALGRNR+HQGLA A+VKLWEKS+IAKIAIKRGVPNT N+RMAEE+KKLTGG L+SRNK
Sbjct: 366  HFALGRNREHQGLAAAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEELKKLTGGVLLSRNK 425

Query: 975  DYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKAS-EIVSNPKSTKSPLIAGT 799
            +YIV YRGNDF+ P +R+VLVEKQ  A   QDEEELARLKAS  I S PK  K+PLIAGT
Sbjct: 426  EYIVLYRGNDFITPKVRQVLVEKQEQAITWQDEEELARLKASASISSKPKVFKNPLIAGT 485

Query: 798  LAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXV 619
            LAET EAK+RWGD  + + R+K +  + +A   SL++                      V
Sbjct: 486  LAETREAKSRWGDSINDDLRKKEKNHMIIAKHTSLLRNLKRKLFLAKTKVTKAEEALAKV 545

Query: 618  QEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELV 439
            QE+L PAELP DLETVTDEERFL R++GLKM++F +LGRREVFDGT+QN+HL WKHRELV
Sbjct: 546  QEYLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELV 605

Query: 438  KILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLT 259
            KILVKGKSF QVKHIAISLEAESGGVLIS+DKTTKGYAII+YRGKNY RP +L+P+NLL+
Sbjct: 606  KILVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGKNYKRPQILKPRNLLS 665

Query: 258  RRQALARSIELQRREALNHHIENLREKIQIMKSQLDQMVADEELVTENLDLHINKAFLSD 79
            RR+ALARSIELQRREALNHHI +LR+KI  +KSQL +M    E     L   +    L D
Sbjct: 666  RRKALARSIELQRREALNHHISSLRDKIWKLKSQLVRMKVAGEKPDAKLLQTVEDDLLKD 725

Query: 78   DD-MEDEGEEAYLLTY 34
            DD +EDEGEEAYL TY
Sbjct: 726  DDKIEDEGEEAYLQTY 741


>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  720 bits (1859), Expect = 0.0
 Identities = 393/702 (55%), Positives = 503/702 (71%), Gaps = 15/702 (2%)
 Frame = -3

Query: 2082 EEHAEVDGRCGRSGVSLIVEELRSSLNQMGTDQGVRIYLSDSD---DEQEPNSDRNAANL 1912
            ++  + DG+    GV   V+E+   +  +GT++   I + D++   +E+ P  D +  N 
Sbjct: 173  QKEVDSDGKFEGEGVE--VDEI--PIGVLGTEK-TEIEMGDANVSLNEKPPGGDEDFGNF 227

Query: 1911 MG------TVSLPWER-DGISDAEQSR-RRSNTELAEKSIPDPELRRLRNVAIRMKERMK 1756
             G       + LPW+R +G+   E+    R NT +AE+ +P+ ELRRL+N+A+RM ER+K
Sbjct: 228  EGFSGNSSLIELPWKRREGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIK 287

Query: 1755 VGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLV 1576
            VGAAGVTQ++V+ IHEKWR+ EVVK+K EGP S +M+RTHEILE +TGGLVIWR+GSS+V
Sbjct: 288  VGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVV 347

Query: 1575 LYRGMTYELPCVQSYSKLANTESNHNNGALTTDHSNATHGNI-VNDTVAASKQLLSNSVA 1399
            LYRGM Y+L CVQSY K      N N    + D +N    +I V D V  ++ ++S+S  
Sbjct: 348  LYRGMAYKLHCVQSYIK--QERDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDSAR 405

Query: 1398 SPMNLSEG-FTDIYEIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYK 1222
               +LSE    D+ E++ LLD+LGPRFKDWSG  PLPVDADLLP VV  YKPP+RLLPY 
Sbjct: 406  YLKDLSEEELMDLSELNHLLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYG 465

Query: 1221 ARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNT 1042
             R  LR+R+MT +RR AR+M PHFALGR+R+ QGLA AMVKLWE+SAIAKIAIKRGV NT
Sbjct: 466  MRHCLRNREMTFIRRLARTMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNT 525

Query: 1041 HNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELAR 862
             N+RMAEE+K LTGGTLVSRNKDYIVFYRGNDFL P + E L E++ L  ++QDEEE AR
Sbjct: 526  CNDRMAEELKNLTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQAR 585

Query: 861  LKASEIV-SNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKY 685
             +AS ++ S  +S K PL+AGTLAET+ A +RWG + S ED  KM R+  LA   SL++Y
Sbjct: 586  HRASALIDSKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRY 645

Query: 684  FXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLG 505
                                 VQE L PAELP DLET++DEERFL+RK+GL M+ F LLG
Sbjct: 646  VGKKLAHAKAKLKKTEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLG 705

Query: 504  RREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYA 325
             R +FDGT++N+HL WK+RELVKI+VKGK+FAQVKHIAISLEAESGGVL+S+D+T KGYA
Sbjct: 706  TRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYA 765

Query: 324  IIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQM 145
            II+YRGKNY RPH LRPKNLLT+RQALARSIELQR EAL HHI +L E+I+++KS  ++M
Sbjct: 766  IIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEM 825

Query: 144  VADEELVTENLDLHINKAFLSDDDM-EDEGEEAYLLTYDGSE 22
                 +  +     ++  + +D+DM EDEGEEAYL  Y GSE
Sbjct: 826  KTGNGIDDKAFYSRLDGTYSTDEDMEEDEGEEAYLEIY-GSE 866


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  719 bits (1855), Expect = 0.0
 Identities = 389/681 (57%), Positives = 492/681 (72%), Gaps = 19/681 (2%)
 Frame = -3

Query: 2007 LNQMGTDQGVR----IYLSDSD---DEQEPNSDRNAANLMG------TVSLPWER-DGIS 1870
            ++Q   +QGV     I + D++   +E+ P  D +  N  G       + LPW+R +G+ 
Sbjct: 186  ISQNSCEQGVNVKTEIEMGDANVSLNEKPPGGDEDFGNFEGFSGNSSLIELPWKRREGLQ 245

Query: 1869 DAEQSR-RRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREV 1693
              E+    R NT +AE+ +P+ ELRRL+N+A+RM ER+KVGAAGVTQ++V+ IHEKWR+ 
Sbjct: 246  PVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKD 305

Query: 1692 EVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANT 1513
            EVVK+K EGP S +M+RTHEILE +TGGLVIWR+GSS+VLYRGM Y+L CVQSY K    
Sbjct: 306  EVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIK--QE 363

Query: 1512 ESNHNNGALTTDHSNATHGNI-VNDTVAASKQLLSNSVASPMNLSEG-FTDIYEIDDLLD 1339
              N N    + D +N    +I V D V  ++ ++S+S     +LSE    D+ E++ LLD
Sbjct: 364  RDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLD 423

Query: 1338 QLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMA 1159
            +LGPRFKDWSG  PLPVDADLLP VV  YKPP+RLLPY  R  LR+R+MT +RR AR+M 
Sbjct: 424  ELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMP 483

Query: 1158 PHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRN 979
            PHFALGR+R+ QGLA AMVKLWE+SAIAKIAIKRGV NT N+RMAEE+K LTGGTLVSRN
Sbjct: 484  PHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRN 543

Query: 978  KDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKASEIV-SNPKSTKSPLIAG 802
            KDYIVFYRGNDFL P + E L E++ L  ++QDEEE AR +AS ++ S  +S K PL+AG
Sbjct: 544  KDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAG 603

Query: 801  TLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXX 622
            TLAET+ A +RWG + S ED  KM R+  LA   SL++Y                     
Sbjct: 604  TLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRK 663

Query: 621  VQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHREL 442
            VQE L PAELP DLET++DEERFL+RK+GL M+ F LLG R +FDGT++N+HL WK+REL
Sbjct: 664  VQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYREL 723

Query: 441  VKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLL 262
            VKI+VKGK+FAQVKHIAISLEAESGGVL+S+D+T KGYAII+YRGKNY RPH LRPKNLL
Sbjct: 724  VKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLL 783

Query: 261  TRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQMVADEELVTENLDLHINKAFLS 82
            T+RQALARSIELQR EAL HHI +L E+I+++KS  ++M     +  +     ++  + +
Sbjct: 784  TKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYST 843

Query: 81   DDDM-EDEGEEAYLLTYDGSE 22
            D+DM EDEGEEAYL  Y GSE
Sbjct: 844  DEDMEEDEGEEAYLEIY-GSE 863


>gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao]
          Length = 873

 Score =  708 bits (1828), Expect = 0.0
 Identities = 374/659 (56%), Positives = 486/659 (73%), Gaps = 4/659 (0%)
 Frame = -3

Query: 1986 QGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDAEQSRRRSNTELAEKSIPDP 1807
            +G+   +S  ++ +  NSD    ++ G            D+ +S++RSNTE+ ++ IP+ 
Sbjct: 218  EGLNDVVSSRENFEVSNSDDEGGSVEG------------DSGRSKKRSNTEMVDRMIPEH 265

Query: 1806 ELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRTHEIL 1627
            E +RLRNVA+RM ER KVG AG+TQA+VE IHE+W+  EVVK+K E P SL+M+RTHEIL
Sbjct: 266  ESQRLRNVALRMVERTKVGVAGITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEIL 325

Query: 1626 ERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANTESNHNNGALTTDHSNATHGNIV 1447
            E++TGGLVIWRSGSSLVLYRGM Y+L CVQSY+     + N  + + T   S+ T   +V
Sbjct: 326  EQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTSQNKVDMNALDCS-TNVESDTTQNIVV 384

Query: 1446 NDTVAASKQLLSNSVASPMNLS-EGFTDIYEIDDLLDQLGPRFKDWSGLNPLPVDADLLP 1270
             ++V   +  + +S     +LS E   D+ E++ LLD+LGPR+KDWSG  PLPVDADLLP
Sbjct: 385  KESVRTMECFMPSSSEYLKDLSKEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLP 444

Query: 1269 GVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWE 1090
             VVPGY+PP+R LPY  R  L+D +MTT RR AR++ PHFALGRNR+ QGLA+A+VKLWE
Sbjct: 445  PVVPGYQPPFRRLPYGIRHCLKDHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWE 504

Query: 1089 KSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVE 910
             SAIAKIAIKRGV NT NERMAEE+K+LTGGTL+SRNK++IVFYRGNDFL P + + L E
Sbjct: 505  SSAIAKIAIKRGVQNTRNERMAEELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKE 564

Query: 909  KQNLATVKQDEEELARLKASEIV-SNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREK 733
            +Q    ++Q+EEE AR +   +V SN K++K PL+AGTLAET  A +RWG Q S E+ E+
Sbjct: 565  RQKSRNLQQEEEEKARERVLALVGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEE 624

Query: 732  MRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERF 553
            M++   L  Q SL++Y                     VQ+ L PA+LP DLET++DEER 
Sbjct: 625  MKKNSALTQQASLVRYLEKKLALAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERI 684

Query: 552  LYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAE 373
            L+RK+GL M+ + LLGRR V+DGTI+N+HL WK+RELVKI+VKG++FAQVKHIAISLEAE
Sbjct: 685  LFRKIGLSMKPYLLLGRRGVYDGTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAE 744

Query: 372  SGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREALNHHIE 193
            SGG+L+SLDKTTKGYAII+YRGKNY RP +LRPKNLLTRRQALARS+ELQRREAL HH+ 
Sbjct: 745  SGGLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVL 804

Query: 192  NLREKIQIMKSQLDQMVADEEL-VTENLDLHINKAFLSDDDMED-EGEEAYLLTYDGSE 22
            +L+EKI++MKS+L++M   +E+ V +     +NKA L D+D+E+ E EE YL TYD SE
Sbjct: 805  DLQEKIELMKSELEEMKTGKEIDVDKTSYSRLNKAPLFDEDIEEGEWEEEYLETYDSSE 863


>gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score =  705 bits (1820), Expect = 0.0
 Identities = 402/815 (49%), Positives = 535/815 (65%), Gaps = 22/815 (2%)
 Frame = -3

Query: 2409 REREELFDDLGNVEDEEKRKVPIVEKLNVS----------SYSAKDCVREIDELSDVLSN 2260
            ++ E + ++   VE+E++ + P+ +K++ S          ++ +K    ++D   +   +
Sbjct: 104  KQNELVQEEKEEVEEEDEEEEPVNQKVSFSLPNRIVYAPWAHGSKRITPQVDSEPETSQH 163

Query: 2259 KENEEKREDLTVKKQNVSSSSTTNVKLVNSSYDKRHSSNISSVRTEQNPVQNGSFKPIEE 2080
               + K  D       + +  T+       S+++R  SN    R     +   S    ++
Sbjct: 164  SGAQGKNLDGFAGHSEIDT--TSGAVKNEKSFERRFDSNRKLERERVGEIGIISIGVSKK 221

Query: 2079 EHAEVDGRCGRSGVSLIVEELRSSLNQMGTDQGVRIYLSDSDDEQEPNSDRNAANLMGTV 1900
            E   +    G +G+SL         N+  +  G        +DE+  N   + +   G++
Sbjct: 222  EEKMISK--GLNGISL---------NETLSGDG-------ENDEKVENFVYSGS---GSI 260

Query: 1899 SLPWERDGISDAEQS----RRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQ 1732
             LPW+R+    +E+     +RRSNTELAE+ +PD ELRRLRNV++RM ER+KVG  G+TQ
Sbjct: 261  RLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHELRRLRNVSLRMLERIKVGVTGITQ 320

Query: 1731 AVVENIHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYE 1552
            A+V  IHEKW+  EVVK+K E P SL+M+RTHEILE KTGGLVIWRSGSS+VLYRGMTY 
Sbjct: 321  ALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILESKTGGLVIWRSGSSVVLYRGMTYN 380

Query: 1551 LPCVQSYSKLANTESN---HNNGALTTDHSNATHGNIVNDTVAASKQLLSNSVASPMNLS 1381
            LPCVQ+Y+K + T S+   H+  A     S++ H   V D    +      S     +LS
Sbjct: 381  LPCVQTYAKHSQTNSHMLQHSENAT----SDSMHNVGVKDVSRTTDFPSLESAEYLKDLS 436

Query: 1380 EG-FTDIYEIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLR 1204
            +     + +++ LLD+LGPRFKDW G  PLPVDADLLP VV GYK P+RLLPY  R  LR
Sbjct: 437  QRELMALNDLNHLLDELGPRFKDWIGREPLPVDADLLPSVVRGYKTPFRLLPYGFRPCLR 496

Query: 1203 DRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMA 1024
            D+ MT  RR AR++ PHFALG NR+ QGLA AM+KLWEKSAIAKIAIKRGV NT NERMA
Sbjct: 497  DKDMTKYRRLARTVPPHFALGMNRELQGLANAMMKLWEKSAIAKIAIKRGVQNTCNERMA 556

Query: 1023 EEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKASE- 847
            EE+K+LTGGTL+SRNKD+IVFYRGND+L   +  VL E++ L  ++QDEEE AR  AS+ 
Sbjct: 557  EELKRLTGGTLLSRNKDFIVFYRGNDYLPSVVTGVLEERRKLRDLQQDEEEQARQMASDY 616

Query: 846  IVSNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXX 667
            +VSN +++K   +AGTLAET+ A T W +Q + +  EKMRR+ T A   SL+++      
Sbjct: 617  VVSNSEASKGQFVAGTLAETMAATTHWRNQLTIDKVEKMRRDSTFARHASLVRHLEKKLA 676

Query: 666  XXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFD 487
                           VQE L P++LP+DLET+TDE+RFL+RK+GL M+ F LLGRREV+ 
Sbjct: 677  LGKGKLRKAEKALARVQESLEPSDLPDDLETLTDEDRFLFRKIGLSMKPFLLLGRREVYS 736

Query: 486  GTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRG 307
            GTI+N+HL WKH+ELVKI+V+GKSF QVKHIAISLEAESGGVL+SLDKTTKGYAII+YRG
Sbjct: 737  GTIENMHLHWKHKELVKIIVRGKSFEQVKHIAISLEAESGGVLVSLDKTTKGYAIILYRG 796

Query: 306  KNYHRPHMLRPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQMVADEEL 127
            KNY  P  LRP+NLLTRRQALARS+ELQRREAL HHI +L+EK+ ++KS+L++M  +  +
Sbjct: 797  KNYQCPLPLRPRNLLTRRQALARSVELQRREALKHHISDLQEKVGLLKSELEEM-GNGRM 855

Query: 126  VTENLDLHI---NKAFLSDDDMEDEGEEAYLLTYD 31
            V +   LH    +    SDD  EDEGEEAYL  YD
Sbjct: 856  VDDGRTLHSTGDDPLIPSDDSEEDEGEEAYLEVYD 890


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
            gi|223546576|gb|EEF48074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 930

 Score =  691 bits (1784), Expect = 0.0
 Identities = 397/897 (44%), Positives = 542/897 (60%), Gaps = 9/897 (1%)
 Frame = -3

Query: 2700 FSDQTLARWSLRISSQRSNFPWQ--EARAVDAAEAGKTRNGLNDLEFDGGAVNKRLGLIV 2527
            F +Q   +WSL++ S R  FPWQ  E +     +       +   E  G  ++K      
Sbjct: 87   FFEQIRDKWSLKVPSTRDTFPWQEPEQQQEHQGQGKNDEEEIERCEISGVTLSKA----- 141

Query: 2526 EKLNXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPLADGVREREELFDDLGNVEDEEKRKV 2347
                                             P   G R ++  F     + +      
Sbjct: 142  --------EIDANPSSIDDDSVSVSLPNHLTTAPWVHGTRPKKNHFSSRPKIGEN----- 188

Query: 2346 PIVEKLNVSSYSAKDCVREIDELSDVLSNKENEEKREDLTVKKQNVSSSSTTNVKLVNSS 2167
             +V+              ++  + D++ N E E    D   K+ N+         +   +
Sbjct: 189  -VVQN-------------DVHTVVDIVENLEKEVTCNDKFKKEDNILHVDNAERLVKEVN 234

Query: 2166 YDKRHSSNISSVRTEQNPVQNGSFKPIEEEHAEVDGRCGRSGVSLIVEELRSSLNQMGTD 1987
            YDK+          ++  VQ G F    +   E+         S I E+        G +
Sbjct: 235  YDKKF---------KEAKVQVGGFSVELKRDNEIARAKYSKSPSYINEK------PFGAN 279

Query: 1986 QGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDAEQSR---RRSNTELAEKSI 1816
             G  + +S  D+               ++ LPWE++ + ++ +     +RSNTELAE+ +
Sbjct: 280  GGYGVQVSYDDNSS-------------SIELPWEKERVMESVEGYLRGKRSNTELAERML 326

Query: 1815 PDPELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRTH 1636
            P+ EL+RLRNVA+RM ER+KVGAAG+ Q +V+ +HEKWR  EVVK+K E P S +MRRTH
Sbjct: 327  PEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEPLSFNMRRTH 386

Query: 1635 EILERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKL--ANTESNHNNGALTTDHSNAT 1462
            EILE +TGGLVIWRSGSS+VLYRG++Y+L CV+S+SK   A  E   +   +T   SNAT
Sbjct: 387  EILENRTGGLVIWRSGSSVVLYRGISYKLHCVRSFSKQDEAGKEILAHPEEVT---SNAT 443

Query: 1461 HGNIVNDTVAASKQLLSNSVASPMNLS-EGFTDIYEIDDLLDQLGPRFKDWSGLNPLPVD 1285
                V   +  ++  + +      +LS E  TD  E++  LD+LGPRF+DW G  PLPVD
Sbjct: 444  LNIGVKHFIGTTESYIPDRAKYLKDLSREELTDFTELNQFLDELGPRFEDWCGREPLPVD 503

Query: 1284 ADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAM 1105
            ADLL  V PGYKPP+RLLPY  R  L D++MT  RR AR++ PHFALGRNRQ QGLAKA+
Sbjct: 504  ADLLLAVDPGYKPPFRLLPYGVRHCLTDKEMTIFRRLARTVPPHFALGRNRQLQGLAKAI 563

Query: 1104 VKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIR 925
            VKLWE+SAI KIAIKRGV NT NERMAEE+K LTGG L+SRNK+YIVFYRGNDFL P+I 
Sbjct: 564  VKLWERSAIVKIAIKRGVQNTRNERMAEELKVLTGGILLSRNKEYIVFYRGNDFLPPAIV 623

Query: 924  EVLVEKQNLATVKQDEEELARLKA-SEIVSNPKSTKSPLIAGTLAETVEAKTRWGDQTSH 748
            + L E++ L  +KQDEEE AR  A + + S+ K++K PL+AGTLAETV A + W DQ   
Sbjct: 624  KTLKERKKLTYLKQDEEEQARQMALASVESSAKTSKVPLVAGTLAETVAATSHWRDQRGS 683

Query: 747  EDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVT 568
             D ++M RE  LA + SL+K+                     V E L P+ LP DLET++
Sbjct: 684  PDIDEMLREAVLAKRASLVKHLENKLALAKGKLRKAEKALAKVHEHLDPSGLPTDLETIS 743

Query: 567  DEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAI 388
            DEERFL+RK+GL M+ +  LG+R V+DGTI+N+HL WK+RELVK++V+GKSFAQVKHIAI
Sbjct: 744  DEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHLHWKYRELVKVIVRGKSFAQVKHIAI 803

Query: 387  SLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREAL 208
            SLEAESGGVL+S+++TTKGYAII+YRGKNY  P ++RPKNLLT+RQAL RSIELQRREAL
Sbjct: 804  SLEAESGGVLVSIERTTKGYAIIVYRGKNYLHPEVMRPKNLLTKRQALVRSIELQRREAL 863

Query: 207  NHHIENLREKIQIMKSQLDQMVADEELVTENLDLHINKAFLSDDDMEDEGEEAYLLT 37
             HHI +L+E+I+++K +L+ M + +E+  + +   ++ + +SD D+E+ GEEAYL++
Sbjct: 864  KHHISDLQERIELLKLELEDMESGKEIDVDKMSSRLDDSSISDSDVEEGGEEAYLVS 920


>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 933

 Score =  688 bits (1775), Expect = 0.0
 Identities = 406/899 (45%), Positives = 543/899 (60%), Gaps = 9/899 (1%)
 Frame = -3

Query: 2700 FSDQTLARWSLRISSQRSNFPWQEARAVDAAEAGKTRNGLNDLEFDGGAVNKRLGLIVEK 2521
            F  Q   +WS+++ S R  FPWQ     +  E        ++ E + G   +    + + 
Sbjct: 57   FYQQIQDKWSMKVDSPRHKFPWQNQEESEDEEE-------DEEEKEEGESQQSEVRVFKP 109

Query: 2520 LNXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPLADGVREREELFDDLGNVEDEEKRKVPI 2341
            ++                                +   E E     + N + +  ++   
Sbjct: 110  VDQEMSFSMPNPVKYAPWANRTKPIKTQVGSIKPEVDYEHEIYKPSVANSDIDATKEFSK 169

Query: 2340 VEKLNVSSYSAKDCVREIDELSDVLSNKENEEKREDLTVKKQNVSSSSTTNVKLVNSSYD 2161
            VE             R++DE+S   S       +E  T+  +        N KL     +
Sbjct: 170  VENFREEFDGNGKLDRDVDEVSVGFS-------KERKTMVSKKFEQEFDRNGKL-----E 217

Query: 2160 KRHSSNISSVRTEQNPVQNG-SFKPIEEEHAEVDGRCGRSGVSLIV-EELRSSLNQMGTD 1987
            +        V  E+N V+   + K  E     ++GR  R  V + V EE   S   +G  
Sbjct: 218  REIDEVFVGVSKEENEVEKMITSKSFEHRKGILEGRIDRISVGVSVKEETVVSERLIGAA 277

Query: 1986 QGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDAEQS----RRRSNTELAEKS 1819
                +     +DE       + ++   +  LPWER+G    E+     ++ SNT  AE S
Sbjct: 278  VDETVSGDSENDENVVTFVSSGSDSRASARLPWEREGELVNEEGGKTRKKWSNTLSAETS 337

Query: 1818 IPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRT 1639
            +PD EL+RLRNV++RM ER KVGAAG+TQ++V+ IHEKW+  EVVK+K E P SL+MRRT
Sbjct: 338  LPDHELKRLRNVSLRMLERTKVGAAGITQSLVDAIHEKWKVDEVVKLKFEEPLSLNMRRT 397

Query: 1638 HEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANTESNHNNGALTTDHSNATH 1459
            H ILE KTGGLVIWRSGSS+VLYRG++Y L CV+SY+K   T S+       T   + TH
Sbjct: 398  HGILESKTGGLVIWRSGSSVVLYRGISYNLQCVKSYTKQRQTGSHMLQDLEDTVRRDGTH 457

Query: 1458 GNIVNDTVAASKQLLSNSVASPMNLSEGFTDIYEIDDLLDQLGPRFKDWSGLNPLPVDAD 1279
             N + D   + K+L+               ++ +++ LLD+LGPRFKDW G  PLPVDAD
Sbjct: 458  -NYMKDL--SKKELM---------------ELSDLNHLLDELGPRFKDWIGREPLPVDAD 499

Query: 1278 LLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVK 1099
            LLP VVPGY+ P+RLLPY  R  L+D+ MT  RR AR+  PHFALGR+++ QGLAKAMVK
Sbjct: 500  LLPAVVPGYQTPFRLLPYGVRPGLKDKDMTKFRRLARAAPPHFALGRSKELQGLAKAMVK 559

Query: 1098 LWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREV 919
            LWEK AIAKIAIKRGV NT NERMAEE+K+LTGGTL+SRNKD+IVFYRGNDFL P +  V
Sbjct: 560  LWEKCAIAKIAIKRGVQNTRNERMAEELKRLTGGTLLSRNKDFIVFYRGNDFLPPVVTGV 619

Query: 918  LVEKQNLATVKQDEEELARLKASE-IVSNPKSTKSPLIAGTLAETVEAKTRWGDQTSHED 742
            L E++ +  ++QDEEE AR   S+ I S  +++   L+AGTLAET+ A  RW  Q + ED
Sbjct: 620  LKERREMRELQQDEEEKARQMTSDYIESRSEASNGQLVAGTLAETIAATARWIKQLTIED 679

Query: 741  REKMRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDE 562
             +KM R+  L  + SL++Y                     VQE L PA+LP+DLE +TDE
Sbjct: 680  VDKMTRDSNLEKRASLVRYLEKKLALAKGKLKKAEKALAKVQENLDPADLPDDLEILTDE 739

Query: 561  ERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISL 382
            +RFL+RK+GL M+ F LLGRREV+ GTI+N+HL WKHRELVKI+V+GK+F QVKHIAISL
Sbjct: 740  DRFLFRKIGLSMKPFLLLGRREVYSGTIENMHLHWKHRELVKIIVRGKNFKQVKHIAISL 799

Query: 381  EAESGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREALNH 202
            EAESGG+L+SLDKTTKGYAII+YRGKNY  P  LRP+NLLTRRQALARSIELQRRE L H
Sbjct: 800  EAESGGLLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSIELQRREGLKH 859

Query: 201  HIENLREKIQIMKSQLDQMVADEELVTENLDLH--INKAFLSDDDMEDEGEEAYLLTYD 31
            H+ +L+E+I+++K++L++M  +  +V +   LH  ++ +  S D+ EDEGEEAYL  YD
Sbjct: 860  HLSDLQERIELLKTELEEM-ENGRMVDDGRTLHSSLDDSLFSSDNEEDEGEEAYLEVYD 917


>gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783180|gb|EOY30436.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao]
          Length = 822

 Score =  681 bits (1757), Expect = 0.0
 Identities = 354/613 (57%), Positives = 457/613 (74%), Gaps = 2/613 (0%)
 Frame = -3

Query: 1986 QGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDAEQSRRRSNTELAEKSIPDP 1807
            +G+   +S  ++ +  NSD    ++ G            D+ +S++RSNTE+ ++ IP+ 
Sbjct: 218  EGLNDVVSSRENFEVSNSDDEGGSVEG------------DSGRSKKRSNTEMVDRMIPEH 265

Query: 1806 ELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRTHEIL 1627
            E +RLRNVA+RM ER KVG AG+TQA+VE IHE+W+  EVVK+K E P SL+M+RTHEIL
Sbjct: 266  ESQRLRNVALRMVERTKVGVAGITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEIL 325

Query: 1626 ERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANTESNHNNGALTTDHSNATHGNIV 1447
            E++TGGLVIWRSGSSLVLYRGM Y+L CVQSY+     + N  + + T   S+ T   +V
Sbjct: 326  EQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTSQNKVDMNALDCS-TNVESDTTQNIVV 384

Query: 1446 NDTVAASKQLLSNSVASPMNLS-EGFTDIYEIDDLLDQLGPRFKDWSGLNPLPVDADLLP 1270
             ++V   +  + +S     +LS E   D+ E++ LLD+LGPR+KDWSG  PLPVDADLLP
Sbjct: 385  KESVRTMECFMPSSSEYLKDLSKEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLP 444

Query: 1269 GVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWE 1090
             VVPGY+PP+R LPY  R  L+D +MTT RR AR++ PHFALGRNR+ QGLA+A+VKLWE
Sbjct: 445  PVVPGYQPPFRRLPYGIRHCLKDHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWE 504

Query: 1089 KSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVE 910
             SAIAKIAIKRGV NT NERMAEE+K+LTGGTL+SRNK++IVFYRGNDFL P + + L E
Sbjct: 505  SSAIAKIAIKRGVQNTRNERMAEELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKE 564

Query: 909  KQNLATVKQDEEELARLKASEIV-SNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREK 733
            +Q    ++Q+EEE AR +   +V SN K++K PL+AGTLAET  A +RWG Q S E+ E+
Sbjct: 565  RQKSRNLQQEEEEKARERVLALVGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEE 624

Query: 732  MRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERF 553
            M++   L  Q SL++Y                     VQ+ L PA+LP DLET++DEER 
Sbjct: 625  MKKNSALTQQASLVRYLEKKLALAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERI 684

Query: 552  LYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAE 373
            L+RK+GL M+ + LLGRR V+DGTI+N+HL WK+RELVKI+VKG++FAQVKHIAISLEAE
Sbjct: 685  LFRKIGLSMKPYLLLGRRGVYDGTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAE 744

Query: 372  SGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREALNHHIE 193
            SGG+L+SLDKTTKGYAII+YRGKNY RP +LRPKNLLTRRQALARS+ELQRREAL HH+ 
Sbjct: 745  SGGLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVL 804

Query: 192  NLREKIQIMKSQL 154
            +L+EKI++MKS+L
Sbjct: 805  DLQEKIELMKSEL 817


>gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative isoform 4 [Theobroma
            cacao]
          Length = 818

 Score =  681 bits (1757), Expect = 0.0
 Identities = 354/613 (57%), Positives = 457/613 (74%), Gaps = 2/613 (0%)
 Frame = -3

Query: 1986 QGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWERDGISDAEQSRRRSNTELAEKSIPDP 1807
            +G+   +S  ++ +  NSD    ++ G            D+ +S++RSNTE+ ++ IP+ 
Sbjct: 218  EGLNDVVSSRENFEVSNSDDEGGSVEG------------DSGRSKKRSNTEMVDRMIPEH 265

Query: 1806 ELRRLRNVAIRMKERMKVGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRTHEIL 1627
            E +RLRNVA+RM ER KVG AG+TQA+VE IHE+W+  EVVK+K E P SL+M+RTHEIL
Sbjct: 266  ESQRLRNVALRMVERTKVGVAGITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEIL 325

Query: 1626 ERKTGGLVIWRSGSSLVLYRGMTYELPCVQSYSKLANTESNHNNGALTTDHSNATHGNIV 1447
            E++TGGLVIWRSGSSLVLYRGM Y+L CVQSY+     + N  + + T   S+ T   +V
Sbjct: 326  EQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTSQNKVDMNALDCS-TNVESDTTQNIVV 384

Query: 1446 NDTVAASKQLLSNSVASPMNLS-EGFTDIYEIDDLLDQLGPRFKDWSGLNPLPVDADLLP 1270
             ++V   +  + +S     +LS E   D+ E++ LLD+LGPR+KDWSG  PLPVDADLLP
Sbjct: 385  KESVRTMECFMPSSSEYLKDLSKEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLP 444

Query: 1269 GVVPGYKPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWE 1090
             VVPGY+PP+R LPY  R  L+D +MTT RR AR++ PHFALGRNR+ QGLA+A+VKLWE
Sbjct: 445  PVVPGYQPPFRRLPYGIRHCLKDHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWE 504

Query: 1089 KSAIAKIAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVE 910
             SAIAKIAIKRGV NT NERMAEE+K+LTGGTL+SRNK++IVFYRGNDFL P + + L E
Sbjct: 505  SSAIAKIAIKRGVQNTRNERMAEELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKE 564

Query: 909  KQNLATVKQDEEELARLKASEIV-SNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREK 733
            +Q    ++Q+EEE AR +   +V SN K++K PL+AGTLAET  A +RWG Q S E+ E+
Sbjct: 565  RQKSRNLQQEEEEKARERVLALVGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEE 624

Query: 732  MRRELTLASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERF 553
            M++   L  Q SL++Y                     VQ+ L PA+LP DLET++DEER 
Sbjct: 625  MKKNSALTQQASLVRYLEKKLALAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERI 684

Query: 552  LYRKMGLKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAE 373
            L+RK+GL M+ + LLGRR V+DGTI+N+HL WK+RELVKI+VKG++FAQVKHIAISLEAE
Sbjct: 685  LFRKIGLSMKPYLLLGRRGVYDGTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAE 744

Query: 372  SGGVLISLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREALNHHIE 193
            SGG+L+SLDKTTKGYAII+YRGKNY RP +LRPKNLLTRRQALARS+ELQRREAL HH+ 
Sbjct: 745  SGGLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVL 804

Query: 192  NLREKIQIMKSQL 154
            +L+EKI++MKS+L
Sbjct: 805  DLQEKIELMKSEL 817


>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568843115|ref|XP_006475467.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|568843117|ref|XP_006475468.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
            gi|568843119|ref|XP_006475469.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 812

 Score =  678 bits (1749), Expect = 0.0
 Identities = 359/587 (61%), Positives = 438/587 (74%), Gaps = 3/587 (0%)
 Frame = -3

Query: 1896 LPWERDGISDAEQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVEN 1717
            LPW+R+        RRRSNTELAEK IP+ EL+RLRN+++RM ER KVG+AG+TQA+V++
Sbjct: 231  LPWKRN-----TDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDS 285

Query: 1716 IHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQ 1537
            IHEKW+  EVVK+K E P SL M+RTHEILER+TGGLVIWRSGSS+VL+RGM Y+LPCVQ
Sbjct: 286  IHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQ 345

Query: 1536 SYSKLANTESNHNNGALTTDHSNATHGNI-VNDTVAASKQLLSNSVASPMNLS-EGFTDI 1363
            S++K       HN+   T D +N    N+  +   +A +  + +S  +  NLS E   D+
Sbjct: 346  SFTK-------HNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDL 398

Query: 1362 YEIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTL 1183
             E++ LLD+LGPRFKDW G  PLPVDADLLP VVP YKPP RLLPY  +  LRD + T  
Sbjct: 399  CELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEF 458

Query: 1182 RRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLT 1003
            RR AR   PHFALGRNR+ QGLAKAMVKLWEKSAIAKIAIKR V NT NERMAEE+KKLT
Sbjct: 459  RRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLT 518

Query: 1002 GGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKASEIVS-NPKS 826
            GGTL+ RNKDYIVFYRGNDFL P + + + E+  L  ++QDEEE AR  AS ++    K 
Sbjct: 519  GGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKG 578

Query: 825  TKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXX 646
                L+AGTLAET+ A +RWG Q S+ED EKM R+ TL+   SL++Y             
Sbjct: 579  FVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLK 638

Query: 645  XXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIH 466
                    VQE L PAELP+DLET+T+EERFL RKMGL M+ + LLGRR ++DGTI+N+H
Sbjct: 639  MADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMH 698

Query: 465  LGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPH 286
            L WK+RELVKI+VKGKSFAQVK IAISLEAESGGVL+SLDKT KG AII+YRGKNY RP 
Sbjct: 699  LHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPL 758

Query: 285  MLRPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQM 145
             LRP+NLL RRQALARS+ELQRRE L HHI +L E+I+++KS+L+++
Sbjct: 759  KLRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKSELEEI 805


>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
            gi|557554714|gb|ESR64728.1| hypothetical protein
            CICLE_v10007477mg [Citrus clementina]
          Length = 810

 Score =  678 bits (1749), Expect = 0.0
 Identities = 359/587 (61%), Positives = 438/587 (74%), Gaps = 3/587 (0%)
 Frame = -3

Query: 1896 LPWERDGISDAEQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVEN 1717
            LPW+R+        RRRSNTELAEK IP+ EL+RLRN+++RM ER KVG+AG+TQA+V++
Sbjct: 229  LPWKRN-----TDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDS 283

Query: 1716 IHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQ 1537
            IHEKW+  EVVK+K E P SL M+RTHEILER+TGGLVIWRSGSS+VL+RGM Y+LPCVQ
Sbjct: 284  IHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQ 343

Query: 1536 SYSKLANTESNHNNGALTTDHSNATHGNI-VNDTVAASKQLLSNSVASPMNLS-EGFTDI 1363
            S++K       HN+   T D +N    N+  +   +A +  + +S  +  NLS E   D+
Sbjct: 344  SFTK-------HNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDL 396

Query: 1362 YEIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTL 1183
             E++ LLD+LGPRFKDW G  PLPVDADLLP VVP YKPP RLLPY  +  LRD + T  
Sbjct: 397  CELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEF 456

Query: 1182 RRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLT 1003
            RR AR   PHFALGRNR+ QGLAKAMVKLWEKSAIAKIAIKR V NT NERMAEE+KKLT
Sbjct: 457  RRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLT 516

Query: 1002 GGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKASEIVS-NPKS 826
            GGTL+ RNKDYIVFYRGNDFL P + + + E+  L  ++QDEEE AR  AS ++    K 
Sbjct: 517  GGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKG 576

Query: 825  TKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXX 646
                L+AGTLAET+ A +RWG Q S+ED EKM R+ TL+   SL++Y             
Sbjct: 577  FVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLK 636

Query: 645  XXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIH 466
                    VQE L PAELP+DLET+T+EERFL RKMGL M+ + LLGRR ++DGTI+N+H
Sbjct: 637  MADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMH 696

Query: 465  LGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPH 286
            L WK+RELVKI+VKGKSFAQVK IAISLEAESGGVL+SLDKT KG AII+YRGKNY RP 
Sbjct: 697  LHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPL 756

Query: 285  MLRPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQM 145
             LRP+NLL RRQALARS+ELQRRE L HHI +L E+I+++KS+L+++
Sbjct: 757  KLRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKSELEEI 803


>ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [Amborella trichopoda]
            gi|548842074|gb|ERN02031.1| hypothetical protein
            AMTR_s00045p00114550 [Amborella trichopoda]
          Length = 1059

 Score =  677 bits (1747), Expect = 0.0
 Identities = 360/623 (57%), Positives = 451/623 (72%), Gaps = 7/623 (1%)
 Frame = -3

Query: 1902 VSLPW--ERDGISDAEQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQA 1729
            +  PW    +   + EQ R RS T LAE +IP+PEL RLR++A+ MKER+ +G AGVTQA
Sbjct: 442  IEFPWVARAEERGNVEQRRSRSTTALAESTIPEPELLRLRSLALHMKERINIGVAGVTQA 501

Query: 1728 VVENIHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYEL 1549
            +V  IH+KWR VEVVKIK EGPP+++M+RTHEILERKTGGLVI R GS +VLYRGM YEL
Sbjct: 502  IVAAIHDKWRHVEVVKIKFEGPPAMNMKRTHEILERKTGGLVILRCGSFVVLYRGMGYEL 561

Query: 1548 PCVQSYSKLANTESNHNNGALTTDHSNATHGNIVNDTV--AASKQLLSNSVASPMNLSEG 1375
            PCVQSY +  +   +      T  H      + + DT   A  +  +S+  +SP N  + 
Sbjct: 562  PCVQSYRQHLHIIHD------TLPHDMIPATDNIGDTKVNALVRATVSSGTSSPTNYDKC 615

Query: 1374 FTDIY-EIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDR 1198
             +    +I+ +L+ LGPRF+DWSG  PLPVDADLLP V+PGYKPP+R LP+  R  L+++
Sbjct: 616  ESPHETDIEIILESLGPRFRDWSGCAPLPVDADLLPPVLPGYKPPFRFLPHGMRHCLKNK 675

Query: 1197 QMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEE 1018
             MT LRR AR M PHFALGRNR  QGLA AMV LWE S IAKIAIKRGV NT NERMAEE
Sbjct: 676  DMTALRRLARQMPPHFALGRNRVLQGLAAAMVNLWETSVIAKIAIKRGVQNTCNERMAEE 735

Query: 1017 IKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKA-SEIV 841
            ++KLTGG LVSRNK+YIVFYRGNDFL PS++EVLV ++ LA    DEEE AR+KA +  +
Sbjct: 736  LEKLTGGILVSRNKEYIVFYRGNDFLSPSVKEVLVNREKLAKSLLDEEEKARMKAHASTL 795

Query: 840  SNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXX 661
            SN  + + PL+AGTL ET+EAK+RWG Q S  +R++M+R++TL+   +LIK+        
Sbjct: 796  SNTSTARGPLVAGTLEETLEAKSRWGMQPSTHERDEMKRDMTLSRHAALIKHLEKKLALA 855

Query: 660  XXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGT 481
                         VQE L+PAELP DLE +TDEER  +RKMGL M+ + LLGRR VFDGT
Sbjct: 856  KRKVSKAERALLKVQEDLKPAELPTDLEIITDEERITFRKMGLSMKPYLLLGRRGVFDGT 915

Query: 480  IQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKN 301
            ++N+HL WK+REL+KILVKGK F QVKHIAISLEAESGGVLIS+DKTTKGYAII+YRGKN
Sbjct: 916  VENMHLHWKYRELIKILVKGKRFLQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGKN 975

Query: 300  YHRPHMLRPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQM-VADEELV 124
            Y RP M+RP NLLT+R+ALARS+ELQRREALNHHI +L+ +I+ ++S+ DQM    E+  
Sbjct: 976  YQRPSMVRPGNLLTKRKALARSVELQRREALNHHILDLQMQIEKLRSEFDQMRTVWEKEG 1035

Query: 123  TENLDLHINKAFLSDDDMEDEGE 55
             E+  +      LS+DD + E E
Sbjct: 1036 QEDSYVTSEDEILSEDDEDSEDE 1058


>ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 803

 Score =  676 bits (1744), Expect = 0.0
 Identities = 359/584 (61%), Positives = 435/584 (74%), Gaps = 3/584 (0%)
 Frame = -3

Query: 1896 LPWERDGISDAEQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVEN 1717
            LPW+R+        RRRSNTELAEK IP+ EL+RLRN+++RM ER KVG+AG+TQA+V++
Sbjct: 231  LPWKRN-----TDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDS 285

Query: 1716 IHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQ 1537
            IHEKW+  EVVK+K E P SL M+RTHEILER+TGGLVIWRSGSS+VL+RGM Y+LPCVQ
Sbjct: 286  IHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQ 345

Query: 1536 SYSKLANTESNHNNGALTTDHSNATHGNI-VNDTVAASKQLLSNSVASPMNLS-EGFTDI 1363
            S++K       HN+   T D +N    N+  +   +A +  + +S  +  NLS E   D+
Sbjct: 346  SFTK-------HNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDL 398

Query: 1362 YEIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTL 1183
             E++ LLD+LGPRFKDW G  PLPVDADLLP VVP YKPP RLLPY  +  LRD + T  
Sbjct: 399  CELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEF 458

Query: 1182 RRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLT 1003
            RR AR   PHFALGRNR+ QGLAKAMVKLWEKSAIAKIAIKR V NT NERMAEE+KKLT
Sbjct: 459  RRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLT 518

Query: 1002 GGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKASEIVS-NPKS 826
            GGTL+ RNKDYIVFYRGNDFL P + + + E+  L  ++QDEEE AR  AS ++    K 
Sbjct: 519  GGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKG 578

Query: 825  TKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXX 646
                L+AGTLAET+ A +RWG Q S+ED EKM R+ TL+   SL++Y             
Sbjct: 579  FVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLK 638

Query: 645  XXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIH 466
                    VQE L PAELP+DLET+T+EERFL RKMGL M+ + LLGRR ++DGTI+N+H
Sbjct: 639  MADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMH 698

Query: 465  LGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPH 286
            L WK+RELVKI+VKGKSFAQVK IAISLEAESGGVL+SLDKT KG AII+YRGKNY RP 
Sbjct: 699  LHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPL 758

Query: 285  MLRPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQL 154
             LRP+NLL RRQALARS+ELQRRE L HHI +L E+I+++KS+L
Sbjct: 759  KLRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKSEL 802


>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
            gi|550336383|gb|EEE92740.2| hypothetical protein
            POPTR_0006s15340g [Populus trichocarpa]
          Length = 977

 Score =  676 bits (1744), Expect = 0.0
 Identities = 403/927 (43%), Positives = 556/927 (59%), Gaps = 34/927 (3%)
 Frame = -3

Query: 2700 FSDQTLARWSLRISSQRSNFPW----QEARAVDAAEAGKTRNGLNDLEFDGGAVNKRLGL 2533
            F +Q   +WSL+++S R  FPW    Q+ +     E  +    + +++      +     
Sbjct: 54   FFEQIHHKWSLKLTSTRDKFPWQEQEQQQQQQQEEEEEEEEEDIKEVDAVPSVSDTVSFN 113

Query: 2532 IVEKLNXXXXXXXXXXXXXXXXXXXXXXXXXXXPV------PLADGVREREELFDDLGNV 2371
            +  +L                             V       + +GV ++EE  +   N+
Sbjct: 114  LPNRLTTPPWIHGATPKQAHFDYQPRKGDNSIHGVFENREDNVVNGVIDKEERIEKEVNL 173

Query: 2370 EDEEKRKVPIVEKLNV----SSYSAKDCVREIDELSDVLSNKENEEKREDLTVKKQNVSS 2203
            ++  K +V   +  +V     +   KDC       +    N E + + +++  KK++V  
Sbjct: 174  DNNFKEQVVDFDDASVFQLPEAKEIKDCSVHRYAENREEDNAEEDSREDNVANKKESVGK 233

Query: 2202 SSTTNVKLVNSSYDKRHSSNIS-------SVRTEQNPVQNGSFKPIEEEHAEV------- 2065
                N+   N   DK + +++        S+ T+ N V + + KP + +  +        
Sbjct: 234  KINCNL---NKFKDKHYYNSVELPGDKEKSIVTDLNDVVSLTEKPFDGDDGDFGNIEVCN 290

Query: 2064 DGRCGRSGVSLIVEELRSSLNQMGTDQGVRIYLSDSDDEQEPNSDRNAANLMGTVSLPWE 1885
            DG C          E  S  +        +  L D ++ +  N+  + +N      LPW+
Sbjct: 291  DGHCDSF-------ENLSCKDSNDVVSVSKKQLGDFENVEVSNNGVSNSN-----ELPWK 338

Query: 1884 RDGISDA---EQSRRRSNTELAEKSIPDPELRRLRNVAIRMKERMKVGAAGVTQAVVENI 1714
            R    D+   ++SR++SNT+LAE+ +P+ EL+RLRNVA+RM ER+KVGA G+TQ +V+ I
Sbjct: 339  RTSGLDSLGEDKSRKKSNTDLAERMLPEHELKRLRNVALRMLERIKVGATGITQDLVDAI 398

Query: 1713 HEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWRSGSSLVLYRGMTYELPCVQS 1534
            HEKW+  EVVK+K E P S +M+RTHEILE +TGGL+IWRSGSS+V+YRG TY+  CVQS
Sbjct: 399  HEKWKLDEVVKLKFEWPLSCNMKRTHEILESRTGGLIIWRSGSSVVMYRGTTYKFQCVQS 458

Query: 1533 YSKLANTESNHNNGALTTDHSNATHGNIVNDTVAASKQLLSNSVASPMNLS-EGFTDIYE 1357
            Y+K      +    A    +S AT    + D     + ++ ++     +LS E   D  E
Sbjct: 459  YTKQNEAGMDVLQYAEEATNS-ATSSAGMKDLARTMESIIPDAAKYLKDLSQEELMDFSE 517

Query: 1356 IDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGYKPPYRLLPYKARRSLRDRQMTTLRR 1177
            ++ LLD+LGPR+KDW G  PLPVDADLLP VVPGYK P RLLPY  +  L ++  T  RR
Sbjct: 518  LNHLLDELGPRYKDWCGREPLPVDADLLPAVVPGYKSPLRLLPYGVKPCLSNKNTTNFRR 577

Query: 1176 AARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTHNERMAEEIKKLTGG 997
             AR+  PHF LGRNR+ QGLA AMVKLWE+SAIAKIAIKRGV  T NE MAEE+K+LTGG
Sbjct: 578  LARTTPPHFVLGRNRELQGLANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEELKRLTGG 637

Query: 996  TLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLATVKQDEEELARLKASEIV-SNPKSTK 820
            TL+SRNK+YIVFYRGNDFL P I E L E++ LA + QDEE+ AR   S  + S+ K+TK
Sbjct: 638  TLLSRNKEYIVFYRGNDFLPPVINETLKERRKLAFLYQDEEDQARQMTSAFIGSSVKTTK 697

Query: 819  SPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELTLASQVSLIKYFXXXXXXXXXXXXXX 640
             PL+AGTL ETV A +RWG+Q S ED E+M R+  LA   SL+K+               
Sbjct: 698  GPLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQAKGKLKKS 757

Query: 639  XXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMGLKMRSFFLLGRREVFDGTIQNIHLG 460
                  VQE L P ELP DLET++DEERFL+RK+GL M+ +  LGRR VFDGTI+N+HL 
Sbjct: 758  EKDLAKVQENLEPTELPTDLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLH 817

Query: 459  WKHRELVKILVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYAIIMYRGKNYHRPHML 280
            WK+RELVKI+V+ K  AQVKHIAISLEAESGGVL+S+D+TTKGYAII+YRGKNY RP  +
Sbjct: 818  WKYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYMRPQAM 877

Query: 279  RPKNLLTRRQALARSIELQRREALNHHIENLREKIQIMKSQLDQMVADEEL-VTENLDLH 103
            RP+NLLTRRQALARS+ELQR EAL HHI +L+E+I+++ S+L++M AD++  V + L   
Sbjct: 878  RPENLLTRRQALARSVELQRYEALKHHITDLQERIELVTSELEEMEADKKSEVYKALYSK 937

Query: 102  INKAFLSDDDMEDEGEEAYLLTYDGSE 22
             + A + ++D E E E    + Y  SE
Sbjct: 938  FDDASILNEDEEGEEEPILKVQYPNSE 964


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
            gi|565382761|ref|XP_006357700.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 820

 Score =  674 bits (1739), Expect = 0.0
 Identities = 381/758 (50%), Positives = 503/758 (66%), Gaps = 12/758 (1%)
 Frame = -3

Query: 2298 VREIDELSDVLSNKENEEKREDLTVKKQNVSSSSTTNVKLVNSSYDKRHS-SNISSVRTE 2122
            V E+ E     S  EN        V  ++VSS S   V L    + K+   S +    T 
Sbjct: 100  VEEVVERQVQFSELENP-------VVNESVSSGSRVKVNLAPWVHGKQPKISQVGESSTV 152

Query: 2121 QNPVQN----GSFKPIEEEHAEVDGRCGRSGVSLIVEELRSSLNQMGTDQGVRIYLSDSD 1954
               ++N    GS +  +  + +V+  C           LRS   Q   ++ +++     +
Sbjct: 153  GKSLENCEDIGSIREQKSLNKQVNFDCA---------PLRSP-QQQDFEKDIKL-----E 197

Query: 1953 DEQEPNSDRNAANLMGTVSLPWERDGISDAEQSRRRSNTELAEKSIPDPELRRLRNVAIR 1774
             + E   D+   N   +V LPWE D +       R+SN ELAEK IP+ +L+RLRN A+R
Sbjct: 198  SKAEARVDKGITNAKDSVRLPWEGDKL-------RKSNAELAEKLIPEAQLKRLRNAALR 250

Query: 1773 MKERMKVGAAGVTQAVVENIHEKWREVEVVKIKVEGPPSLHMRRTHEILERKTGGLVIWR 1594
            M ER+KVG+ GVTQ +V++I +KW+  E+VK++ EGPPS +M+RTH+ILE +TGGLVIWR
Sbjct: 251  MVERIKVGSGGVTQELVDSIQDKWKVDEIVKLRFEGPPSHNMKRTHDILEHRTGGLVIWR 310

Query: 1593 SGSSLVLYRGMTYELPCVQSYSKLANTESNHNNGALTTDHSNATHGNIVNDTVAA-SKQL 1417
            SGSS+VLYRG++Y+LPCVQS+     T  NH+      D S   +    ND+  +   + 
Sbjct: 311  SGSSIVLYRGISYKLPCVQSF-----TSKNHD-----VDESEYPN----NDSCQSLGVKC 356

Query: 1416 LSNSVASPMN-----LSEGFTDIYEIDDLLDQLGPRFKDWSGLNPLPVDADLLPGVVPGY 1252
            L+ +   P N      SE   D+ E++ +LD++GPRFKDWSG  PLPVDADLLP VVPGY
Sbjct: 357  LNEAAERPRNGSTDLSSEEIVDLSELNMILDEVGPRFKDWSGREPLPVDADLLPAVVPGY 416

Query: 1251 KPPYRLLPYKARRSLRDRQMTTLRRAARSMAPHFALGRNRQHQGLAKAMVKLWEKSAIAK 1072
            +PP+R LPY A+ +L++++MT LRR AR M PHFALGRNRQ QGLA AMVKLW +SAIAK
Sbjct: 417  RPPFRRLPYGAKLNLKNKEMTYLRRTARIMPPHFALGRNRQLQGLAAAMVKLWRRSAIAK 476

Query: 1071 IAIKRGVPNTHNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLVPSIREVLVEKQNLAT 892
            IAIKRGV NT NERM+EE+K LTGGTL+SRNKDYIVFYRGNDFL P + E L E +  + 
Sbjct: 477  IAIKRGVLNTSNERMSEELKVLTGGTLLSRNKDYIVFYRGNDFLPPRVTEALEEAERKSD 536

Query: 891  VKQDEEELARLKA-SEIVSNPKSTKSPLIAGTLAETVEAKTRWGDQTSHEDREKMRRELT 715
              QD+EE AR +A + I S+ ++ K PL+AGTL+ET+ A +RWG+Q S E+REKM R+  
Sbjct: 537  FLQDQEEQARQRAVTSIDSDTRAPKRPLVAGTLSETMAATSRWGNQPSIEEREKMMRDAA 596

Query: 714  LASQVSLIKYFXXXXXXXXXXXXXXXXXXXXVQEFLRPAELPNDLETVTDEERFLYRKMG 535
            +A   SL+KY                     +QE   P+ELP DLE ++ EERFL+RKMG
Sbjct: 597  VARHASLVKYLEEKLALAKGKVKKAENMLRKLQENREPSELPTDLEILSAEERFLFRKMG 656

Query: 534  LKMRSFFLLGRREVFDGTIQNIHLGWKHRELVKILVKGKSFAQVKHIAISLEAESGGVLI 355
            L M+ F LLGRR+VFDGTI+NIHL WK+RELVKI+ + ++ AQ+KHIAI+LEAESGG+L+
Sbjct: 657  LSMKPFLLLGRRDVFDGTIENIHLHWKYRELVKIIAERRNTAQIKHIAITLEAESGGLLV 716

Query: 354  SLDKTTKGYAIIMYRGKNYHRPHMLRPKNLLTRRQALARSIELQRREALNHHIENLREKI 175
            S+DKTT+GYAII+YRGKNY RP+  RPKNLLT+RQALARSIELQRREAL HHI  L++KI
Sbjct: 717  SIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITALQDKI 776

Query: 174  QIMKSQLDQMVADEELVTENLDLHINKAFLSDDDMEDE 61
            Q +KS+L+     EE+  E L   ++ A   +DDME +
Sbjct: 777  QNLKSELEDTNMVEEIDEETLFSRLD-ASDDEDDMEKQ 813