BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00003686
         (989 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004962606.1| PREDICTED: DNA polymerase theta-like isoform...   184   5e-44
gb|EMT16049.1| Helicase POLQ-like protein [Aegilops tauschii]         173   1e-40
gb|AFW56449.1| hypothetical protein ZEAMMB73_871172 [Zea mays]        169   2e-39
gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japo...   167   8e-39
gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indi...   167   8e-39
ref|XP_006663960.1| PREDICTED: uncharacterized protein LOC102699...   165   3e-38
ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform...   163   8e-38
gb|EMJ27875.1| hypothetical protein PRUPE_ppa020963mg [Prunus pe...   163   1e-37
ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, par...   162   2e-37
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              159   2e-36
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   158   3e-36
gb|EOY29653.1| Helicases,ATP-dependent helicases,nucleic acid bi...   157   5e-36
gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza...   157   5e-36
ref|XP_006837921.1| hypothetical protein AMTR_s00218p00019950 [A...   156   1e-35
ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragar...   154   7e-35
gb|EPS63523.1| hypothetical protein M569_11260, partial [Genlise...   152   3e-34
ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Popu...   151   3e-34
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   151   4e-34
ref|NP_001078482.1| MUS308 and mammalian DNA polymerase-like pro...   150   7e-34
ref|XP_004498542.1| PREDICTED: DNA polymerase theta-like [Cicer ...   149   1e-33

>ref|XP_004962606.1| PREDICTED: DNA polymerase theta-like isoform X1 [Setaria italica]
            gi|514752594|ref|XP_004962607.1| PREDICTED: DNA
            polymerase theta-like isoform X2 [Setaria italica]
            gi|514752598|ref|XP_004962608.1| PREDICTED: DNA
            polymerase theta-like isoform X3 [Setaria italica]
            gi|514752600|ref|XP_004962609.1| PREDICTED: DNA
            polymerase theta-like isoform X4 [Setaria italica]
          Length = 2082

 Score =  184 bits (467), Expect = 5e-44
 Identities = 126/311 (40%), Positives = 171/311 (54%), Gaps = 10/311 (3%)
 Frame = +1

Query: 49   DKSSCAISQGVGNLSRATIDDIQPRD-VAWNGCCEPNRISTEEIKPLPAAQHFDASPLPV 225
            DKSSCA++     L R+  D++  ++ V      +  ++S +    +  +QH D+SPLPV
Sbjct: 275  DKSSCAVAVSSKTLPRSGKDELACQNTVGSTDTHQMEKLSNKVDLLVANSQHIDSSPLPV 334

Query: 226  RHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKTCEVNTG 405
            +H DF H ++        Q    K E   S      E   V   H+Q    LK     +G
Sbjct: 335  KHLDFFHMDDI-------QVSGSKCEEKGS-----NEAGNVQTNHVQ----LK----ESG 374

Query: 406  LMQKSN--------SSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDT 561
            L +K N         +G L L   S +           C     V      G L  + + 
Sbjct: 375  LQRKENLIDPGNEMKTGVLDLQTDSDS------AAMIQCQG---VFKSTTEGKLHSIQEG 425

Query: 562  IKDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQLTSWLPAE 738
             KD   + ++ + +  N  K +K  K+   F     EASTP+SS+ LKD  +L+SWLP E
Sbjct: 426  DKDSHQKKSLAAYS--NGCKPKKDSKS--KFVSQEVEASTPTSSVPLKDHSKLSSWLPPE 481

Query: 739  VCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKI 918
            +C +YMKKGISELYPWQVECLLV+GVL+KRNLVYCASTSAGKSFVAE+LMLRR++ +G +
Sbjct: 482  LCAVYMKKGISELYPWQVECLLVDGVLEKRNLVYCASTSAGKSFVAEVLMLRRILSSGNM 541

Query: 919  AIIVLPYVSIC 951
            AI+VLPYVSIC
Sbjct: 542  AILVLPYVSIC 552


>gb|EMT16049.1| Helicase POLQ-like protein [Aegilops tauschii]
          Length = 2000

 Score =  173 bits (438), Expect = 1e-40
 Identities = 110/304 (36%), Positives = 170/304 (55%), Gaps = 3/304 (0%)
 Frame = +1

Query: 49   DKSSCAISQGVGNLSRATIDDIQPRD-VAWNGCCEPNRISTEEIKPLPAAQHFDASPLPV 225
            DKSSCA++ G   L R+  ++    + V  N   + + +S      + + QH + SPLPV
Sbjct: 201  DKSSCAVALGSKALPRSGNEEFNCENTVGSNPMKQMDTLSNTAELAVASRQHKNNSPLPV 260

Query: 226  RHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKTCE-VNT 402
            +H DF H++     +   +     V      S+++ +G  ++    +T N++ + + + T
Sbjct: 261  KHLDFFHEDAIQVSDLEGKEKGDTVPG----SAQVNQGRPMDSNFHRTENLMHSVDDIKT 316

Query: 403  GLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTIKDDKVR 582
              + +S ++G                         H +    +G  + K SD    +++ 
Sbjct: 317  ITLSESKTAGM-----------------------GHSIDVGSRGSCMIK-SDL---NQLT 349

Query: 583  STVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQLTSWLPAEVCRIYMK 759
                 L   +S+ ++    + + F+  R E  TP+SS+ LKD  +L+SWLP E+C IYMK
Sbjct: 350  HGETKLLAAHSNPDKPNRDSKSKFASQRVETCTPTSSVPLKDHSKLSSWLPHELCAIYMK 409

Query: 760  KGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKIAIIVLPY 939
            KGI +LYPWQVECLLV+GVL+ RNLVYCASTSAGKSFVAE+LMLRR++ + KIAI+VLPY
Sbjct: 410  KGIPQLYPWQVECLLVDGVLENRNLVYCASTSAGKSFVAEVLMLRRILSSQKIAILVLPY 469

Query: 940  VSIC 951
            VS+C
Sbjct: 470  VSLC 473


>gb|AFW56449.1| hypothetical protein ZEAMMB73_871172 [Zea mays]
          Length = 733

 Score =  169 bits (428), Expect = 2e-39
 Identities = 116/319 (36%), Positives = 164/319 (51%), Gaps = 18/319 (5%)
 Frame = +1

Query: 49   DKSSCAISQGVGNLSRATIDDIQPRD-VAWNGCCEPNRISTEEIKPLPAAQHFDASPLPV 225
            DKSSCA++     L R+  D++  ++ V  N      ++S +        QH  +SPLPV
Sbjct: 234  DKSSCAVAAFFKTLPRSGRDELDCQNTVGSNDTHHIEKLSNKVESLAVNCQHIISSPLPV 293

Query: 226  RHFDFSHDENNLTQN--YPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKTCEVN 399
            +  DF H+++       +  +   +   A          G    +  +  +++LK   +N
Sbjct: 294  KQLDFFHEDDIKVSGSKFETKGSYETCNAQADRVPLKGSGRLEKENLMDPVDVLKRSAIN 353

Query: 400  TGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTIKDDKV 579
                          LH  S  +    RC          V      G +    +  +D  +
Sbjct: 354  --------------LHTDSAAM----RCQG--------VFKSTTEGKVHPTQEAERDSNL 387

Query: 580  RSTVMSLTCKNSSKEQKGMKNLATFSESRK--------------EASTPSSSM-LKDRLQ 714
                ++    N +K      +LA +S +RK              EASTP+SS+ LKD  +
Sbjct: 388  IRRDLNQPTHNENK------SLAAYSNNRKTWIDSKSKVASQEVEASTPTSSIPLKDHSK 441

Query: 715  LTSWLPAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLR 894
            ++SWLP ++C IYMKKGISELYPWQVECLLVEGVL KRNLVYCASTSAGKSFVAE+LMLR
Sbjct: 442  ISSWLPPDLCAIYMKKGISELYPWQVECLLVEGVLGKRNLVYCASTSAGKSFVAEVLMLR 501

Query: 895  RVMLTGKIAIIVLPYVSIC 951
            +++ TG +AI+VLPYVSIC
Sbjct: 502  QILSTGNMAILVLPYVSIC 520


>gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japonica Group]
          Length = 2044

 Score =  167 bits (422), Expect = 8e-39
 Identities = 121/314 (38%), Positives = 159/314 (50%), Gaps = 13/314 (4%)
 Frame = +1

Query: 49   DKSSCAISQGVGNLSRATIDDIQPRDVAWNGCCEPNRISTEEIKPLPAA---QHFDASPL 219
            DKSSCA++     L R+        +    G  E  ++     K  P A    H ++SPL
Sbjct: 271  DKSSCAVALCSKILPRSGNGGSDHENTV--GSNETKQMDRSSYKEEPVAANNHHVNSSPL 328

Query: 220  PVRHFDFSHDEN----NLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKT 387
            PV+H DF H++      L       A+    ++       LT       K    +++  +
Sbjct: 329  PVKHLDFFHEDEIQVPGLKIEEKGGAVDLSQKSQMKNRENLTHSVDNVNKSTFDMHIDSS 388

Query: 388  CEVNTGLMQKSNSSGCL-PLHAGSGNL*S*HRCPQASC----NASHLVVDEKKGGALTKV 552
              ++   + K  + G   P   G             SC    + + L+  E K   LT  
Sbjct: 389  ATIHDECLSKLTTEGKNHPTRVGDSG----------SCLTRRDLNQLIYSEDK--LLTAY 436

Query: 553  SDTIKDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQLTSWL 729
            SD  K  K         C N             F+    EA+TP+SS+  KD  +L+SWL
Sbjct: 437  SDHGKPSK--------DCTNK------------FASQEMEANTPTSSVPQKDHSKLSSWL 476

Query: 730  PAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLT 909
            P E+C IYMKKGI ELYPWQVECLLVEGVL+KRNLVYCASTSAGKSFVAEILMLRR++ +
Sbjct: 477  PPELCAIYMKKGIPELYPWQVECLLVEGVLEKRNLVYCASTSAGKSFVAEILMLRRILFS 536

Query: 910  GKIAIIVLPYVSIC 951
            GK+AI+VLPYVSIC
Sbjct: 537  GKMAILVLPYVSIC 550


>gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indica Group]
          Length = 1986

 Score =  167 bits (422), Expect = 8e-39
 Identities = 121/314 (38%), Positives = 159/314 (50%), Gaps = 13/314 (4%)
 Frame = +1

Query: 49   DKSSCAISQGVGNLSRATIDDIQPRDVAWNGCCEPNRISTEEIKPLPAA---QHFDASPL 219
            DKSSCA++     L R+        +    G  E  ++     K  P A    H ++SPL
Sbjct: 251  DKSSCAVALCSKILPRSGNGGSDHENTV--GSNETKQMDRSSYKEEPVAANNHHVNSSPL 308

Query: 220  PVRHFDFSHDEN----NLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKT 387
            PV+H DF H++      L       A+    ++       LT       K    +++  +
Sbjct: 309  PVKHLDFFHEDEIQVPGLKIEEKGGAVDLSPKSQMKNRENLTHSVDNVNKSTFDMHIDSS 368

Query: 388  CEVNTGLMQKSNSSGCL-PLHAGSGNL*S*HRCPQASC----NASHLVVDEKKGGALTKV 552
              ++   + K  + G   P   G             SC    + + L+  E K   LT  
Sbjct: 369  ATIHDECLSKLTTEGKNHPTRVGDSG----------SCLTRRDLNQLIYSEDK--LLTAY 416

Query: 553  SDTIKDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQLTSWL 729
            SD  K  K         C N             F+    EA+TP+SS+  KD  +L+SWL
Sbjct: 417  SDHGKPSK--------DCTNK------------FASQEMEANTPTSSVPQKDHSKLSSWL 456

Query: 730  PAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLT 909
            P E+C IYMKKGI ELYPWQVECLLVEGVL+KRNLVYCASTSAGKSFVAEILMLRR++ +
Sbjct: 457  PPELCAIYMKKGIPELYPWQVECLLVEGVLEKRNLVYCASTSAGKSFVAEILMLRRILFS 516

Query: 910  GKIAIIVLPYVSIC 951
            GK+AI+VLPYVSIC
Sbjct: 517  GKMAILVLPYVSIC 530


>ref|XP_006663960.1| PREDICTED: uncharacterized protein LOC102699269 [Oryza brachyantha]
          Length = 2062

 Score =  165 bits (417), Expect = 3e-38
 Identities = 122/319 (38%), Positives = 167/319 (52%), Gaps = 18/319 (5%)
 Frame = +1

Query: 49   DKSSCAISQGVGNLSRATIDDIQ-PRDVAWNGCCEPNRISTEEIKPLPAAQHFDASPLPV 225
            DKSSCA++     L R+   DI   + V  N     +  S++E      + H ++SPLPV
Sbjct: 269  DKSSCAVALCSKILPRSGQVDIDYEKTVGSNETKYMDESSSKEGSVAANSHHVNSSPLPV 328

Query: 226  RHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKTCEVNTG 405
            +H DF H++           L  K +  T   +   +G   N    +  N++ + +    
Sbjct: 329  KHLDFFHEDEIQVPG-----LKTKQKGGTVDVNH--KGQLKNSSFQRVDNLMHSVDD--- 378

Query: 406  LMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTIKDDKVRS 585
             M K+ S   +   A + N          +   +H       G + TK      +  + S
Sbjct: 379  -MNKNTSDMRIDSSATTHNG---RLFKLTTAGTNHPTRVGASGFSPTKRD---LNQLIHS 431

Query: 586  TVMSLT-CKNSSKEQKGMKNLATFSESRKEASTPSSSML-KDRLQLTSWLPAEVCRIYMK 759
                LT C N  K  K   N   F+    EA+TP+SS+L KD  +L+SWLP E+C IYMK
Sbjct: 432  ADKMLTACSNHDKPNKDCTN--KFASQETEANTPTSSVLQKDHSKLSSWLPPELCAIYMK 489

Query: 760  KGISELYPWQ---------------VECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLR 894
            KGIS+LYPWQ               VECLLVEGV++KRNLVYCASTSAGKSFVAE+LMLR
Sbjct: 490  KGISQLYPWQLELTTNLKNFSLFPIVECLLVEGVVEKRNLVYCASTSAGKSFVAEVLMLR 549

Query: 895  RVMLTGKIAIIVLPYVSIC 951
            R++ +GK+AI+VLPYVSIC
Sbjct: 550  RILFSGKMAILVLPYVSIC 568


>ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform X1 [Citrus sinensis]
            gi|568844552|ref|XP_006476152.1| PREDICTED: DNA
            polymerase theta-like isoform X2 [Citrus sinensis]
          Length = 2191

 Score =  163 bits (413), Expect = 8e-38
 Identities = 106/250 (42%), Positives = 137/250 (54%), Gaps = 1/250 (0%)
 Frame = +1

Query: 205  DASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLK 384
            + SPLP++H DF  ++ NL    P        EA       ++E   V  K  Q +   K
Sbjct: 372  ELSPLPIKHLDFLFEDKNLKGTKPGCGAADTSEAMMFRDGVVSEKGSVTHKSCQKIKF-K 430

Query: 385  TCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTI 564
                NT     S + G   +                    S L+V E+K    ++  D+I
Sbjct: 431  CHHDNT-----SRTEGISDVQEKD----------------SVLIVHERKLDISSQGIDSI 469

Query: 565  KDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSS-MLKDRLQLTSWLPAEV 741
              D   + +         K+  G       +E   EA TPSSS MLKD L L+SWLP+E+
Sbjct: 470  TSDSPTNVI---------KKPVG-------NEKSDEAGTPSSSGMLKDCLDLSSWLPSEI 513

Query: 742  CRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKIA 921
            C IY K+GIS+LYPWQVECL V+GVL +RNLVYCASTSAGKSFVAEILMLRR++ TGK+A
Sbjct: 514  CSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMA 573

Query: 922  IIVLPYVSIC 951
            ++VLPYVSIC
Sbjct: 574  LLVLPYVSIC 583


>gb|EMJ27875.1| hypothetical protein PRUPE_ppa020963mg [Prunus persica]
          Length = 2169

 Score =  163 bits (412), Expect = 1e-37
 Identities = 101/258 (39%), Positives = 137/258 (53%), Gaps = 9/258 (3%)
 Frame = +1

Query: 205 DASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLK 384
           + SPLPV+HFDFS ++ NL ++ P       +++   +  E +E S ++ + L+   M++
Sbjct: 358 EVSPLPVKHFDFSCEDKNLDKSVPHHLDAYNLKSVAHVGGEQSESSLIDPRGLRNPMMIR 417

Query: 385 TCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTI 564
                                                CN S             + +   
Sbjct: 418 -------------------------------------CNKS-------------QENQVT 427

Query: 565 KDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRK--------EASTPSSSM-LKDRLQL 717
             D+  ++V ++T        K M + +   E  K        EASTPSS + LKD L L
Sbjct: 428 FRDQYTNSVNAVTNMKLDLTGKDMTSYSPVDEVVKLTGNHESDEASTPSSFVPLKDHLDL 487

Query: 718 TSWLPAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRR 897
            SWLP E+C +Y KKGIS+LYPWQV+CL VEGVL +RNLVYCASTSAGKSFVAEILMLRR
Sbjct: 488 NSWLPPEICSLYRKKGISKLYPWQVDCLQVEGVLQRRNLVYCASTSAGKSFVAEILMLRR 547

Query: 898 VMLTGKIAIIVLPYVSIC 951
           V+ +G +AI+VLPYVSIC
Sbjct: 548 VLSSGTMAILVLPYVSIC 565


>ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, partial [Citrus clementina]
            gi|557553839|gb|ESR63853.1| hypothetical protein
            CICLE_v100072282mg, partial [Citrus clementina]
          Length = 1810

 Score =  162 bits (410), Expect = 2e-37
 Identities = 106/250 (42%), Positives = 136/250 (54%), Gaps = 1/250 (0%)
 Frame = +1

Query: 205  DASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLK 384
            + SPLP++H DF  ++ NL    P        EA       ++E   V  K  Q +   K
Sbjct: 372  ELSPLPIKHLDFLFEDKNLKGTKPDCGAADTSEAMMFRDGVVSEKGSVTHKSCQKIKF-K 430

Query: 385  TCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTI 564
                NT     S + G   +                    S L+V E+K    ++  D+I
Sbjct: 431  CHHDNT-----SRTEGISDVQEKD----------------SVLIVHERKLDISSQGIDSI 469

Query: 565  KDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSS-MLKDRLQLTSWLPAEV 741
              D   + +         K+  G K          EA TPSSS MLKD L L+SWLP+E+
Sbjct: 470  TSDSPTNVI---------KKPVGNKK-------SDEAGTPSSSGMLKDCLDLSSWLPSEI 513

Query: 742  CRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKIA 921
            C IY K+GIS+LYPWQVECL V+GVL +RNLVYCASTSAGKSFVAEILMLRR++ TGK+A
Sbjct: 514  CSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMA 573

Query: 922  IIVLPYVSIC 951
            ++VLPYVSIC
Sbjct: 574  LLVLPYVSIC 583


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  159 bits (401), Expect = 2e-36
 Identities = 101/252 (40%), Positives = 133/252 (52%), Gaps = 5/252 (1%)
 Frame = +1

Query: 211 SPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKTC 390
           SPLPV+ FDF  +E NL +  P      K++    +  E +    VN K      +LKT 
Sbjct: 366 SPLPVKRFDFLFEEKNLDETNPPHCSADKLDV---MDGEQSACGSVNHK------VLKTT 416

Query: 391 EVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTIKD 570
            +  G M +      +   A                        +++   L++  D IK 
Sbjct: 417 GITNGGMSEVKDMNSIDAEA------------------------KREVDLLSQEKDNIKA 452

Query: 571 DK----VRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSS-SMLKDRLQLTSWLPA 735
           D     +  ++++  C                     EASTPSS   LKD L L+ WLP+
Sbjct: 453 DSPDLGITKSIIACECD--------------------EASTPSSFEPLKDSLDLSKWLPS 492

Query: 736 EVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGK 915
           E+C IY KKGIS+LY WQV+CL V+GVL KRNLVYCASTSAGKSFVAEILMLRR++ TGK
Sbjct: 493 EICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCASTSAGKSFVAEILMLRRLISTGK 552

Query: 916 IAIIVLPYVSIC 951
           +A++VLPYVSIC
Sbjct: 553 MALLVLPYVSIC 564


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
           vinifera]
          Length = 2181

 Score =  158 bits (400), Expect = 3e-36
 Identities = 102/254 (40%), Positives = 136/254 (53%), Gaps = 7/254 (2%)
 Frame = +1

Query: 211 SPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNM-LKT 387
           SPLPV+ FDF  +E NL +  P      K++    +  E +    VN K L+T  + +  
Sbjct: 376 SPLPVKRFDFLFEEKNLDETNPPHCSADKLDV---MDGEQSACGSVNHKVLKTTGIVIDY 432

Query: 388 CEVNT-GLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTI 564
           C+  T G M +      +   A                        +++   L++  D I
Sbjct: 433 CKAQTNGGMSEVKDMNSIDAEA------------------------KREVDLLSQEKDNI 468

Query: 565 KDDK----VRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSS-SMLKDRLQLTSWL 729
           K D     +  ++++  C                     EASTPSS   LKD L L+ WL
Sbjct: 469 KADSPDLGITKSIIACECD--------------------EASTPSSFEPLKDSLDLSKWL 508

Query: 730 PAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLT 909
           P+E+C IY KKGIS+LY WQV+CL V+GVL KRNLVYCASTSAGKSFVAEILMLRR++ T
Sbjct: 509 PSEICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCASTSAGKSFVAEILMLRRLIST 568

Query: 910 GKIAIIVLPYVSIC 951
           GK+A++VLPYVSIC
Sbjct: 569 GKMALLVLPYVSIC 582


>gb|EOY29653.1| Helicases,ATP-dependent helicases,nucleic acid binding,ATP
           binding,DNA-directed DNA polymerases,DNA binding
           [Theobroma cacao]
          Length = 2146

 Score =  157 bits (398), Expect = 5e-36
 Identities = 104/256 (40%), Positives = 137/256 (53%), Gaps = 7/256 (2%)
 Frame = +1

Query: 205 DASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNML- 381
           + S LPV+H DFS D+  L  + P   ++++        S++TE   VN K    +N L 
Sbjct: 370 EVSLLPVKHLDFSFDDKILDGSIPH--IIQR-------DSKVTECGIVNHKGPSIVNTLT 420

Query: 382 -----KTCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALT 546
                +T E   G  Q+  S   +P                                   
Sbjct: 421 DHDELQTIEEVQGEQQERASVHVVP----------------------------------- 445

Query: 547 KVSDTIKDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQLTS 723
           K  D +      +++ S +  N + +  G  N         E +TP S + LKDRL L+S
Sbjct: 446 KKEDNLSSQD-NNSITSTSAANKANKSIGECN---------ETTTPLSFVALKDRLSLSS 495

Query: 724 WLPAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVM 903
           WLP E+CR Y KKGISELYPWQV+CL V+GVL ++NLVYCASTSAGKSFVAEILMLRRV+
Sbjct: 496 WLPLEICRTYKKKGISELYPWQVDCLQVDGVLQRKNLVYCASTSAGKSFVAEILMLRRVI 555

Query: 904 LTGKIAIIVLPYVSIC 951
           LTGK+A++VLPYVSIC
Sbjct: 556 LTGKVALLVLPYVSIC 571


>gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza sativa Japonica
            Group]
          Length = 2065

 Score =  157 bits (398), Expect = 5e-36
 Identities = 121/327 (37%), Positives = 159/327 (48%), Gaps = 26/327 (7%)
 Frame = +1

Query: 49   DKSSCAISQGVGNLSRATIDDIQPRDVAWNGCCEPNRISTEEIKPLPAA---QHFDASPL 219
            DKSSCA++     L R+        +    G  E  ++     K  P A    H ++SPL
Sbjct: 271  DKSSCAVALCSKILPRSGNGGSDHENTV--GSNETKQMDRSSYKEEPVAANNHHVNSSPL 328

Query: 220  PVRHFDFSHDEN----NLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKT 387
            PV+H DF H++      L       A+    ++       LT       K    +++  +
Sbjct: 329  PVKHLDFFHEDEIQVPGLKIEEKGGAVDLSQKSQMKNRENLTHSVDNVNKSTFDMHIDSS 388

Query: 388  CEVNTGLMQKSNSSGCL-PLHAGSGNL*S*HRCPQASC----NASHLVVDEKKGGALTKV 552
              ++   + K  + G   P   G             SC    + + L+  E K   LT  
Sbjct: 389  ATIHDECLSKLTTEGKNHPTRVGDSG----------SCLTRRDLNQLIYSEDK--LLTAY 436

Query: 553  SDTIKDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQLTSWL 729
            SD  K  K         C N             F+    EA+TP+SS+  KD  +L+SWL
Sbjct: 437  SDHGKPSK--------DCTNK------------FASQEMEANTPTSSVPQKDHSKLSSWL 476

Query: 730  PAEVCRIYMKKGISELYPWQ-------------VECLLVEGVLDKRNLVYCASTSAGKSF 870
            P E+C IYMKKGI ELYPWQ             VECLLVEGVL+KRNLVYCASTSAGKSF
Sbjct: 477  PPELCAIYMKKGIPELYPWQIELITNPKNLFQLVECLLVEGVLEKRNLVYCASTSAGKSF 536

Query: 871  VAEILMLRRVMLTGKIAIIVLPYVSIC 951
            VAEILMLRR++ +GK+AI+VLPYVSIC
Sbjct: 537  VAEILMLRRILFSGKMAILVLPYVSIC 563


>ref|XP_006837921.1| hypothetical protein AMTR_s00218p00019950 [Amborella trichopoda]
            gi|548840332|gb|ERN00490.1| hypothetical protein
            AMTR_s00218p00019950 [Amborella trichopoda]
          Length = 1171

 Score =  156 bits (395), Expect = 1e-35
 Identities = 103/259 (39%), Positives = 142/259 (54%), Gaps = 8/259 (3%)
 Frame = +1

Query: 199  HFDASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNM 378
            H + SPLPV+HFDFS D  +L      +  V  ++ +T    +  E   +N K  Q L  
Sbjct: 384  HRERSPLPVKHFDFSCDGKHLDGKTSTKCFVDGMDHSTLDGCKTLETGNLNCKGKQAL-- 441

Query: 379  LKTCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQ-ASCNASHLVVDEKKG-----GA 540
                  N G+  ++    C     G   L    + P  A  + +H     + G       
Sbjct: 442  ---MTNNDGISAQAKEDNCES--PGKVLLAIREQDPTLAVLSGAHSTTASEVGRDKIVAL 496

Query: 541  LTKVSDTIK-DDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQ 714
            + KV+  +  DDK+  +V  +      + Q+  K ++    +     TPSSS  L   LQ
Sbjct: 497  VPKVNGIVSSDDKLLESVHGI-----DEAQREPKRISVCDTTLNVNGTPSSSTSLNGHLQ 551

Query: 715  LTSWLPAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLR 894
            L +WLP+++C +Y+KKGIS LYPWQVECL V+GV  KRNLVYCASTSAGKS VAEILMLR
Sbjct: 552  LRTWLPSKICEVYLKKGISRLYPWQVECLQVDGVQQKRNLVYCASTSAGKSIVAEILMLR 611

Query: 895  RVMLTGKIAIIVLPYVSIC 951
            RV+ T K+A++VLPYVS+C
Sbjct: 612  RVITTRKMALLVLPYVSLC 630


>ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragaria vesca subsp. vesca]
          Length = 2164

 Score =  154 bits (388), Expect = 7e-35
 Identities = 104/261 (39%), Positives = 137/261 (52%), Gaps = 6/261 (2%)
 Frame = +1

Query: 187  PAAQHF-----DASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVN 351
            P A+H      + SPLPV+HFDFS ++    ++ P +      ++      + +E S  +
Sbjct: 353  PTAKHRKDFCKEVSPLPVKHFDFSREDKISNESMPHRMNSFNSKSMAHGGGQQSESSLTD 412

Query: 352  QKHLQTLNMLKTCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKK 531
             + L+  N +                                RC ++  N      D   
Sbjct: 413  LRGLRHGNTMV-------------------------------RCSKSQENKGQ---DVDS 438

Query: 532  GGALTKVSDTIKDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSM-LKDR 708
              A+TK+ +   +D    T         S     + NL    ES  EASTPSS M LKD 
Sbjct: 439  VTAVTKMKNLSSEDNGGPTF--------SSPGDDVINLNGKGES-SEASTPSSFMPLKDC 489

Query: 709  LQLTSWLPAEVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILM 888
            L L  WL  E+C IY KKGIS+LYPWQVECL V+GVL +RNLVYCASTSAGKSFVAEILM
Sbjct: 490  LDLDGWLAPEICSIYRKKGISKLYPWQVECLQVDGVLQRRNLVYCASTSAGKSFVAEILM 549

Query: 889  LRRVMLTGKIAIIVLPYVSIC 951
            LR+V+ +GKIA++VLPYVS+C
Sbjct: 550  LRQVLSSGKIALLVLPYVSLC 570


>gb|EPS63523.1| hypothetical protein M569_11260, partial [Genlisea aurea]
          Length = 811

 Score =  152 bits (383), Expect = 3e-34
 Identities = 95/252 (37%), Positives = 130/252 (51%), Gaps = 3/252 (1%)
 Frame = +1

Query: 205 DASPLPVRHFDFSHDENNLTQNY-PRQALVKKVEAATSISSELTEGSCVNQKHLQTLNML 381
           +ASPLPV+HFDF  +  +  +     +A++   E    + +            +   +  
Sbjct: 97  EASPLPVKHFDFGSEAKDFVKRLNTNEAIIPAPEKKEGVCAPYLNRCVQKDSKICVSSKD 156

Query: 382 KTCEVNTGL-MQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSD 558
           +T EV  G+ + KS  S                               E++G  L   S 
Sbjct: 157 QTSEVKAGIEISKSIRSD-----------------------------QEEEGLYLNLNSA 187

Query: 559 TIKDDKVRSTVMSLT-CKNSSKEQKGMKNLATFSESRKEASTPSSSMLKDRLQLTSWLPA 735
            + D+    TV S+  CK++                     TP+SS LK  L+L +WLP 
Sbjct: 188 NVTDNTPDRTVASIRECKSNC--------------------TPASSSLKGSLKLNNWLPP 227

Query: 736 EVCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGK 915
           E+C +Y KKGISELYPWQV+CL V+GVL+ RNL+YCASTSAGKS VAEILMLRR+  TGK
Sbjct: 228 EICNVYNKKGISELYPWQVDCLQVDGVLNDRNLIYCASTSAGKSLVAEILMLRRIFTTGK 287

Query: 916 IAIIVLPYVSIC 951
           +A++VLPYVSIC
Sbjct: 288 VALLVLPYVSIC 299


>ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Populus trichocarpa]
            gi|550317750|gb|EEF03387.2| hypothetical protein
            POPTR_0018s00860g [Populus trichocarpa]
          Length = 2173

 Score =  151 bits (382), Expect = 3e-34
 Identities = 116/292 (39%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
 Frame = +1

Query: 82   GNLSRATIDDIQPRDVAWNGCCEPNRISTEEIKPLPAAQHFD-ASPLPVRHFDFSHDENN 258
            GNLSR  ++    R     GC      S E I+     +H +  SPLPV+  D   ++ N
Sbjct: 325  GNLSRELLNKAGSR-----GC------SLEFIR-----KHMEKVSPLPVKQLDLLFEDRN 368

Query: 259  LTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLKTCEVNTGLMQKSNSSGCL 438
            L  + P  A   K ++    SSE++E   +N      L  LK   + T  ++        
Sbjct: 369  LEVSTPPCA---KDDSNVDRSSEISEHGSIN------LKSLKNANIVTYHLKDE------ 413

Query: 439  PLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTIKDDKVRSTVMSLTCKNSS 618
                           P+   +      +E+K    T+   T K D       S+      
Sbjct: 414  ---------------PREEMHK-----EEEKTTVDTET--TKKVDLPNQDADSIIYHLPV 451

Query: 619  KEQKGMKNLATFSESRKEASTPSS-SMLKDRLQLTSWLPAEVCRIYMKKGISELYPWQVE 795
            KE + + +    +    EA TPSS   LKDRL L++WLP EVC IY +KGIS+LYPWQV+
Sbjct: 452  KETRNVID----NNECVEAGTPSSFGPLKDRLDLSNWLPLEVCSIYKRKGISKLYPWQVD 507

Query: 796  CLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKIAIIVLPYVSIC 951
            CL V+GVL +RNLVYCASTSAGKSFVAEILMLRRV+ TGKIA++VLPYVSIC
Sbjct: 508  CLQVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVVSTGKIALLVLPYVSIC 559


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315090|gb|EFH45513.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  151 bits (381), Expect = 4e-34
 Identities = 101/250 (40%), Positives = 137/250 (54%), Gaps = 1/250 (0%)
 Frame = +1

Query: 205 DASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLK 384
           + SPLPV++ +    + N+      Q         T  SS ++E + V+ K  +TL+++ 
Sbjct: 370 EVSPLPVKNLELLFQDKNINGGLREQCASFDQNNITLGSSRISESAFVDNKGCETLDIVN 429

Query: 385 TCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTI 564
           + + + GL+ K                      P+       L+ +E +G          
Sbjct: 430 S-QADKGLIGKMYPE------------------PEGK---KVLLCEENRG---------- 457

Query: 565 KDDKVRSTVMSLTCKNSSKEQKGMKNLATFSESRKEASTPSSSMLK-DRLQLTSWLPAEV 741
               VRS  M             M+     SES +E+ TPSSS    D L L++WLP+EV
Sbjct: 458 ----VRSVSMI----------SNMRKPVDSSES-EESHTPSSSHRNYDGLILSTWLPSEV 502

Query: 742 CRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKIA 921
           C +Y KKGIS+LYPWQVECL V+GVL KRNLVYCASTSAGKSFVAE+LMLRRV+ TGK+A
Sbjct: 503 CSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVITTGKMA 562

Query: 922 IIVLPYVSIC 951
           ++VLPYVSIC
Sbjct: 563 LLVLPYVSIC 572


>ref|NP_001078482.1| MUS308 and mammalian DNA polymerase-like protein [Arabidopsis
           thaliana] gi|62241195|dbj|BAD93700.1| helicase and
           polymerase containing protein TEBICHI [Arabidopsis
           thaliana] gi|332660705|gb|AEE86105.1| MUS308 and
           mammalian DNA polymerase-like protein [Arabidopsis
           thaliana]
          Length = 2154

 Score =  150 bits (379), Expect = 7e-34
 Identities = 76/120 (63%), Positives = 95/120 (79%), Gaps = 9/120 (7%)
 Frame = +1

Query: 619 KEQKGMKNLATFSESRK--------EASTPSSSMLK-DRLQLTSWLPAEVCRIYMKKGIS 771
           +E +G+++++  S  RK        E+ TPSSS    D L L++WLP+EVC +Y KKGIS
Sbjct: 454 EENRGVRSVSMISNMRKPVGSSESEESHTPSSSHRNYDGLSLSTWLPSEVCSVYNKKGIS 513

Query: 772 ELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKIAIIVLPYVSIC 951
           +LYPWQVECL V+GVL KRNLVYCASTSAGKSFVAE+LMLRRV+ TGK+A++VLPYVSIC
Sbjct: 514 KLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVIRTGKMALLVLPYVSIC 573


>ref|XP_004498542.1| PREDICTED: DNA polymerase theta-like [Cicer arietinum]
          Length = 2141

 Score =  149 bits (377), Expect = 1e-33
 Identities = 99/251 (39%), Positives = 134/251 (53%), Gaps = 2/251 (0%)
 Frame = +1

Query: 205 DASPLPVRHFDFSHDENNLTQNYPRQALVKKVEAATSISSELTEGSCVNQKHLQTLNMLK 384
           +AS LPV+HFDFS+++NN+ +N  +   V          + L   +C   K  ++ ++  
Sbjct: 346 EASSLPVKHFDFSYEDNNMGENTLQNCRV----------NNLVNVTCGAGKPYESTSVAS 395

Query: 385 TCEVNTGLMQKSNSSGCLPLHAGSGNL*S*HRCPQASCNASHLVVDEKKGGALTKVSDTI 564
                T  MQ+                               ++VDE             
Sbjct: 396 HTYEQTNEMQEK------------------------------VLVDEL------------ 413

Query: 565 KDDKVRSTVMSLTCKN-SSKEQKGMKNLATFSESRKEASTPSSSM-LKDRLQLTSWLPAE 738
              +V+    S+T  N  S   +   +++T +    EA+TPSS + L + L L  WLP E
Sbjct: 414 -GKRVKKNNFSMTHNNFDSPNNEARTSISTHASL--EATTPSSRVSLDNHLDLHIWLPPE 470

Query: 739 VCRIYMKKGISELYPWQVECLLVEGVLDKRNLVYCASTSAGKSFVAEILMLRRVMLTGKI 918
           +C IY KKGIS+LY WQV+CL V GVL +RNLVYCASTSAGKSFVAEILMLRRV+ TGK+
Sbjct: 471 ICSIYRKKGISKLYNWQVDCLRVNGVLQRRNLVYCASTSAGKSFVAEILMLRRVITTGKM 530

Query: 919 AIIVLPYVSIC 951
           AI+VLPYVSIC
Sbjct: 531 AILVLPYVSIC 541