BLASTX nr result
ID: Stemona21_contig00002387
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00002387
(635 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004497992.1| PREDICTED: 50S ribosomal protein L28, chloro... 183 3e-44
gb|EOY06128.1| Ribosomal L28 family [Theobroma cacao] 182 9e-44
ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precu... 181 1e-43
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides] 180 3e-43
ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Popu... 180 4e-43
gb|ABK95755.1| unknown [Populus trichocarpa] 180 4e-43
ref|XP_006420294.1| hypothetical protein CICLE_v10006136mg [Citr... 179 8e-43
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro... 179 8e-43
ref|XP_004296393.1| PREDICTED: 50S ribosomal protein L28, chloro... 176 5e-42
ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutr... 176 7e-42
gb|EMJ24856.1| hypothetical protein PRUPE_ppa012783mg [Prunus pe... 176 7e-42
emb|CBI23685.3| unnamed protein product [Vitis vinifera] 176 7e-42
ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana... 175 1e-41
ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Caps... 175 1e-41
ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arab... 174 2e-41
ref|XP_006489673.1| PREDICTED: 50S ribosomal protein L28, chloro... 173 3e-41
gb|AFK44373.1| unknown [Medicago truncatula] 172 6e-41
ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Popu... 172 7e-41
sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ... 171 1e-40
ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro... 170 3e-40
>ref|XP_004497992.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cicer
arietinum]
Length = 145
Score = 183 bits (465), Expect = 3e-44
Identities = 94/120 (78%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Frame = +1
Query: 97 RASKRALEVGFARSQLGGLKLTLDHPALTPVQ-PAIPLQPIVARRVCPFTGKKANKANKV 273
R S +L++GF SQL GLK++ P + A P QPIVARRVCPFTGKKAN+ANKV
Sbjct: 26 RPSSPSLQLGFLNSQLSGLKISSQTSLNLPTRIVASPFQPIVARRVCPFTGKKANRANKV 85
Query: 274 SFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 453
SFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 86 SFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 145
>gb|EOY06128.1| Ribosomal L28 family [Theobroma cacao]
Length = 144
Score = 182 bits (461), Expect = 9e-44
Identities = 98/148 (66%), Positives = 113/148 (76%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 ASLVSRSALCLKSADAPVSRARANVRASKRALEVGFARSQLGGLKLTLDHPALTPVQP-A 198
A+L S S L + + P +R + + +GF SQL G+K++ + P L P++P +
Sbjct: 5 ATLGSSSVLRFQKPEPPKTRPSSQL--------LGFVTSQLSGVKISYNIPDLAPIKPIS 56
Query: 199 IPLQPI---VARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLR 369
P P VARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYK+VWWEAGKRYVKLR
Sbjct: 57 APFTPALRPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLR 116
Query: 370 LSTKALKTIEKNGLDAVAKKAGIDLRKE 453
LSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 117 LSTKALKTIEKNGLDAVAKKAGIDLRKE 144
>ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precursor, putative [Ricinus
communis] gi|223531726|gb|EEF33548.1| 50S ribosomal
protein L28, chloroplast precursor, putative [Ricinus
communis]
Length = 143
Score = 181 bits (460), Expect = 1e-43
Identities = 96/146 (65%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
Frame = +1
Query: 19 AASLVSRSALCLKSADAPVSRARANVRASKRALEVGFARSQLGGLKLTLDHPALT-PVQP 195
A + S LC + P A ++ ++ E+GF SQL G+K++ + P L+ P P
Sbjct: 2 AMATASSGLLCFRRPYLPTKLASSSKTSA--VSEIGFVTSQLSGIKISYNLPYLSNPTTP 59
Query: 196 AIPLQPIVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLS 375
PLQ IVARRVCPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYK++WWEAGKRYVKLRLS
Sbjct: 60 --PLQSIVARRVCPFTGKKANRANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLS 117
Query: 376 TKALKTIEKNGLDAVAKKAGIDLRKE 453
TKALKTIEKNGLDAVAKKAGIDL K+
Sbjct: 118 TKALKTIEKNGLDAVAKKAGIDLSKK 143
>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 153
Score = 180 bits (457), Expect = 3e-43
Identities = 89/114 (78%), Positives = 100/114 (87%), Gaps = 2/114 (1%)
Frame = +1
Query: 118 EVGFARSQLGGLKLTLD--HPALTPVQPAIPLQPIVARRVCPFTGKKANKANKVSFSNHK 291
E+GF SQL G++++ + P P PA LQP++ARR+CPFTGKKAN+ANKVSFSNHK
Sbjct: 42 EIGFVTSQLSGIRISYNPPEPLSAPFSPA--LQPVIARRICPFTGKKANRANKVSFSNHK 99
Query: 292 TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 453
TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 100 TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 153
>ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Populus trichocarpa]
gi|550329333|gb|EEF01745.2| hypothetical protein
POPTR_0010s07920g [Populus trichocarpa]
Length = 153
Score = 180 bits (456), Expect = 4e-43
Identities = 89/114 (78%), Positives = 100/114 (87%), Gaps = 2/114 (1%)
Frame = +1
Query: 118 EVGFARSQLGGLKLTLD--HPALTPVQPAIPLQPIVARRVCPFTGKKANKANKVSFSNHK 291
E+GF SQL G++++ + P P PA LQP++ARR+CPFTGKKAN+ANKVSFSNHK
Sbjct: 42 EIGFVTSQLSGIRISYNPPKPLSAPFSPA--LQPVIARRICPFTGKKANRANKVSFSNHK 99
Query: 292 TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 453
TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 100 TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 153
>gb|ABK95755.1| unknown [Populus trichocarpa]
Length = 150
Score = 180 bits (456), Expect = 4e-43
Identities = 89/114 (78%), Positives = 100/114 (87%), Gaps = 2/114 (1%)
Frame = +1
Query: 118 EVGFARSQLGGLKLTLD--HPALTPVQPAIPLQPIVARRVCPFTGKKANKANKVSFSNHK 291
E+GF SQL G++++ + P P PA LQP++ARR+CPFTGKKAN+ANKVSFSNHK
Sbjct: 39 EIGFVTSQLSGIRISYNPPKPLSAPFSPA--LQPVIARRICPFTGKKANRANKVSFSNHK 96
Query: 292 TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 453
TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 97 TKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 150
>ref|XP_006420294.1| hypothetical protein CICLE_v10006136mg [Citrus clementina]
gi|557522167|gb|ESR33534.1| hypothetical protein
CICLE_v10006136mg [Citrus clementina]
Length = 154
Score = 179 bits (453), Expect = 8e-43
Identities = 94/127 (74%), Positives = 107/127 (84%), Gaps = 4/127 (3%)
Frame = +1
Query: 85 RANVRASKRALEVGFARSQLGGLKLTLDHPAL-TPV--QPAIP-LQPIVARRVCPFTGKK 252
++ V+A + E+GF SQL G+K++ P + TP+ +P P LQPIVARRVCPFTGKK
Sbjct: 28 KSMVKAVSSSEELGFVTSQLSGIKISYSLPDVATPISSRPFAPGLQPIVARRVCPFTGKK 87
Query: 253 ANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKA 432
+NKANKVSFSNHKT K QFVNLQYK+VWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKA
Sbjct: 88 SNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKA 147
Query: 433 GIDLRKE 453
GIDLRKE
Sbjct: 148 GIDLRKE 154
>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
vinifera]
Length = 146
Score = 179 bits (453), Expect = 8e-43
Identities = 92/125 (73%), Positives = 106/125 (84%), Gaps = 4/125 (3%)
Frame = +1
Query: 91 NVRASKRALEVGFARSQLGGLKLTLDHPAL-TPVQPA---IPLQPIVARRVCPFTGKKAN 258
+++ +K A ++ F SQ GG+K++ H L P+ A +PL+P VARRVCPFTGKKAN
Sbjct: 23 SLKKAKMASDLAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRP-VARRVCPFTGKKAN 81
Query: 259 KANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGI 438
KANKVSFSNHKTKKLQFVNLQYK++WWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGI
Sbjct: 82 KANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGI 141
Query: 439 DLRKE 453
DLRKE
Sbjct: 142 DLRKE 146
>ref|XP_004296393.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 150
Score = 176 bits (446), Expect = 5e-42
Identities = 92/149 (61%), Positives = 114/149 (76%), Gaps = 4/149 (2%)
Frame = +1
Query: 16 AAASLVSRSALCLKSADAPVSRARANVRASKRALEVGFARSQLGGLKLTLDHPALTP--- 186
A+A+ S LC + + S+ ++ ++ +VGF SQL GLK++ D + P
Sbjct: 3 ASATAAVFSGLCFRRGSSDSSKRLSS--KTQAVSDVGFVTSQLSGLKISHDMSSQLPSPI 60
Query: 187 VQPAIP-LQPIVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVK 363
P++P LQPIVARR+CPFTGKKANKANK+SFS HKTKKLQFVNLQYKR+WWE GKR++K
Sbjct: 61 FTPSLPGLQPIVARRICPFTGKKANKANKISFSAHKTKKLQFVNLQYKRIWWEGGKRFLK 120
Query: 364 LRLSTKALKTIEKNGLDAVAKKAGIDLRK 450
LRLSTKA+KTIEKNGL+AVAKKAGIDLRK
Sbjct: 121 LRLSTKAIKTIEKNGLEAVAKKAGIDLRK 149
>ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutrema salsugineum]
gi|557111658|gb|ESQ51942.1| hypothetical protein
EUTSA_v10017390mg [Eutrema salsugineum]
Length = 142
Score = 176 bits (445), Expect = 7e-42
Identities = 88/129 (68%), Positives = 108/129 (83%), Gaps = 4/129 (3%)
Frame = +1
Query: 79 RARANVRASKRALEVGFARSQLGGLKLTLDHPALTPVQPAIP----LQPIVARRVCPFTG 246
R ++ ++ ++ E+GF SQL G++++ P+ + ++P LQPIVARR+CPFTG
Sbjct: 14 RMTSSPKSVAKSTELGFLTSQLSGVRISHGPPSDVISRISVPSFPGLQPIVARRICPFTG 73
Query: 247 KKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAK 426
KKAN+ANKVSFSNHKTKKLQFVNLQYK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAK
Sbjct: 74 KKANRANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAK 133
Query: 427 KAGIDLRKE 453
KAGIDLRK+
Sbjct: 134 KAGIDLRKK 142
>gb|EMJ24856.1| hypothetical protein PRUPE_ppa012783mg [Prunus persica]
Length = 154
Score = 176 bits (445), Expect = 7e-42
Identities = 90/149 (60%), Positives = 112/149 (75%), Gaps = 4/149 (2%)
Frame = +1
Query: 16 AAASLVSRSALCLKSADAPVSRARANVRASKRALEVGFARSQLGGLKLTLDHPALTPVQP 195
A + +LC + A++ S+ ++ ++GF SQLGG+K++ D + P
Sbjct: 7 AGVFFANTRSLCFRKAES--SKRLLQPFKAEAVSDIGFVTSQLGGIKISYDMSSQLPKSI 64
Query: 196 AI----PLQPIVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVK 363
+I LQPIVARR+CPFTGKK+N+ANK+SFS HKTKKLQFVNLQYKRVWWEAGKR++K
Sbjct: 65 SIFSPPALQPIVARRICPFTGKKSNRANKISFSAHKTKKLQFVNLQYKRVWWEAGKRFLK 124
Query: 364 LRLSTKALKTIEKNGLDAVAKKAGIDLRK 450
LRLSTKALKTIEKNG+DAVAKKAGIDLRK
Sbjct: 125 LRLSTKALKTIEKNGIDAVAKKAGIDLRK 153
>emb|CBI23685.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 176 bits (445), Expect = 7e-42
Identities = 91/118 (77%), Positives = 101/118 (85%), Gaps = 4/118 (3%)
Frame = +1
Query: 112 ALEVGFARSQLGGLKLTLDHPAL-TPVQPA---IPLQPIVARRVCPFTGKKANKANKVSF 279
A ++ F SQ GG+K++ H L P+ A +PL+P VARRVCPFTGKKANKANKVSF
Sbjct: 2 ASDLAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRP-VARRVCPFTGKKANKANKVSF 60
Query: 280 SNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 453
SNHKTKKLQFVNLQYK++WWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 61 SNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 118
>ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana]
gi|21542433|sp|O22795.2|RK28_ARATH RecName: Full=50S
ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|20196843|gb|AAB80662.2|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21387067|gb|AAM47937.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21592705|gb|AAM64654.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S
ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 175 bits (443), Expect = 1e-41
Identities = 90/129 (69%), Positives = 108/129 (83%), Gaps = 3/129 (2%)
Frame = +1
Query: 76 SRARANVRASKRALEVGFARSQLGGLKLTLD-HPALTPVQ-PAIP-LQPIVARRVCPFTG 246
S A++ +++ + E+GF SQL GL+++ + + P+ P +QPIVARR+CPFTG
Sbjct: 15 SSAKSMTKSTVTSKELGFLTSQLSGLRISYTPSDVINRISLPSFPGIQPIVARRICPFTG 74
Query: 247 KKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAK 426
KKAN+ANKVSFSNHKTKKLQFVNLQYKRVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAK
Sbjct: 75 KKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAK 134
Query: 427 KAGIDLRKE 453
KAGIDLRK+
Sbjct: 135 KAGIDLRKK 143
>ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Capsella rubella]
gi|482563829|gb|EOA28019.1| hypothetical protein
CARUB_v10024195mg [Capsella rubella]
Length = 166
Score = 175 bits (443), Expect = 1e-41
Identities = 91/131 (69%), Positives = 107/131 (81%), Gaps = 5/131 (3%)
Frame = +1
Query: 76 SRARANVRASKRALEVGFARSQLGGLKLTLDHPALTPVQ----PAIP-LQPIVARRVCPF 240
S A+ +++ + E+GF SQL GL+++ H + P+ P +QPIVARR+CPF
Sbjct: 38 SSAKTVAKSTVTSKELGFLTSQLSGLRIS--HAPTDVINRISVPSFPGIQPIVARRICPF 95
Query: 241 TGKKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 420
TGKKAN+ANKVSFSNHKTKKLQFVNLQYKRVWWEAGKR+VKLRLSTKALKTIEKNGLDAV
Sbjct: 96 TGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAV 155
Query: 421 AKKAGIDLRKE 453
AKKAGIDLRK+
Sbjct: 156 AKKAGIDLRKK 166
>ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata] gi|297325292|gb|EFH55712.1| 50S ribosomal
protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 174 bits (441), Expect = 2e-41
Identities = 93/139 (66%), Positives = 110/139 (79%), Gaps = 5/139 (3%)
Frame = +1
Query: 52 LKSADAPVSRARANVRASKRALEVGFARSQLGGLKLTLDHPALTPVQ----PAIP-LQPI 216
L+ +P S A++ V + E+GF SQL G++++ H + P+ P +QPI
Sbjct: 11 LRMTSSPKSVAKSTVTSK----ELGFLTSQLSGVRIS--HAPSDVINRISVPSFPGIQPI 64
Query: 217 VARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTI 396
VARR+CPFTGKKAN+ANKVSFSNHKTKKLQFVNLQYKRVWWEAGKR+VKLRLSTKALKTI
Sbjct: 65 VARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTI 124
Query: 397 EKNGLDAVAKKAGIDLRKE 453
EKNGLDAVAKKAGIDLRK+
Sbjct: 125 EKNGLDAVAKKAGIDLRKK 143
>ref|XP_006489673.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Citrus
sinensis]
Length = 154
Score = 173 bits (439), Expect = 3e-41
Identities = 92/127 (72%), Positives = 105/127 (82%), Gaps = 4/127 (3%)
Frame = +1
Query: 85 RANVRASKRALEVGFARSQLGGLKLTLDHPAL-TPV--QPAIP-LQPIVARRVCPFTGKK 252
++ V+ + E+GF SQL G+K++ P + TP+ +P P LQPIVARRVCPFTGKK
Sbjct: 28 KSMVKVVSSSEELGFVTSQLSGIKISYRLPDVATPISSRPFAPGLQPIVARRVCPFTGKK 87
Query: 253 ANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKA 432
+NKANKVSFSNHKT K QFVNLQYK+VWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKA
Sbjct: 88 SNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKA 147
Query: 433 GIDLRKE 453
IDLRKE
Sbjct: 148 RIDLRKE 154
>gb|AFK44373.1| unknown [Medicago truncatula]
Length = 146
Score = 172 bits (437), Expect = 6e-41
Identities = 87/113 (76%), Positives = 96/113 (84%), Gaps = 1/113 (0%)
Frame = +1
Query: 118 EVGFARSQLGGLKLTLDHPALTPVQ-PAIPLQPIVARRVCPFTGKKANKANKVSFSNHKT 294
++GF SQL GLK++ P A P QPIVA+RVCPFTGKK+N+ANKVSFSNHKT
Sbjct: 34 QLGFLNSQLSGLKISSQTSLKLPTPIVASPFQPIVAKRVCPFTGKKSNRANKVSFSNHKT 93
Query: 295 KKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 453
KKLQFVNLQYKRVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDL K+
Sbjct: 94 KKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLSKK 146
>ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Populus trichocarpa]
gi|550333255|gb|EEE89957.2| hypothetical protein
POPTR_0008s16970g [Populus trichocarpa]
Length = 104
Score = 172 bits (436), Expect = 7e-41
Identities = 86/106 (81%), Positives = 95/106 (89%), Gaps = 2/106 (1%)
Frame = +1
Query: 142 LGGLKLTLD--HPALTPVQPAIPLQPIVARRVCPFTGKKANKANKVSFSNHKTKKLQFVN 315
+GG++++ + P P PAI QP+VARR+CPFTGKKAN+ANKVSFSNHKTKKLQFVN
Sbjct: 1 MGGIRISYNPPKPLTAPFTPAI--QPLVARRICPFTGKKANRANKVSFSNHKTKKLQFVN 58
Query: 316 LQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 453
LQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 59 LQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 104
>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
ribosomal protein L28 precursor, chloroplast - tobacco
gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
ribosomal protein CL28 [Nicotiana tabacum]
Length = 151
Score = 171 bits (434), Expect = 1e-40
Identities = 90/129 (69%), Positives = 104/129 (80%), Gaps = 6/129 (4%)
Frame = +1
Query: 85 RANVRASKRALEVGFARSQLGGLKLTLDH------PALTPVQPAIPLQPIVARRVCPFTG 246
RA++ SK + E+ F SQL GLK++ H P P +P+ LQP VARR+CPFTG
Sbjct: 26 RASLPQSKLSSELSFVTSQLSGLKISSTHFISSSAPLSVPFKPS--LQP-VARRICPFTG 82
Query: 247 KKANKANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAK 426
KK+N+ANKVS SNHKTKKLQFVNLQYKR+WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAK
Sbjct: 83 KKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAK 142
Query: 427 KAGIDLRKE 453
KAGIDL K+
Sbjct: 143 KAGIDLSKK 151
>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
sativus]
Length = 150
Score = 170 bits (431), Expect = 3e-40
Identities = 86/121 (71%), Positives = 101/121 (83%), Gaps = 4/121 (3%)
Frame = +1
Query: 103 SKRALEVGFARSQLGGLKLTLDHPALTPVQ-PAIPLQPI---VARRVCPFTGKKANKANK 270
+K + ++GF SQL G++++ +H ++P PL+P VARR+CPFTGKKANK N
Sbjct: 30 TKPSSDLGFLTSQLSGIRISSNHSLISPSSISTAPLRPSLQPVARRICPFTGKKANKKNL 89
Query: 271 VSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 450
VSFSNHKTKKLQFVNLQYK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK
Sbjct: 90 VSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149
Query: 451 E 453
E
Sbjct: 150 E 150