BLASTX nr result
ID: Stemona21_contig00002269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00002269
(509 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 72 7e-14
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 72 3e-13
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 9e-13
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 62 2e-12
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 65 2e-12
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 66 3e-12
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 66 3e-12
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 63 1e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 65 2e-11
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 59 3e-11
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 63 4e-11
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 64 5e-11
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 64 5e-11
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 8e-11
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 60 2e-10
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 60 2e-10
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 59 2e-10
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 60 4e-10
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 57 6e-10
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 68 8e-10
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 72.4 bits (176), Expect(2) = 7e-14
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F Y PK + L ++ FADD ++ G +SI + KVL EF K SGL++++E S
Sbjct: 575 FGYHPKCRA-----IGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKS 629
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
+YL+G + ++ F G LP+RYL LPLVS R+ A LP
Sbjct: 630 TMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLP 676
Score = 30.0 bits (66), Expect(2) = 7e-14
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R LI L S ++W +AF L A + E+++L
Sbjct: 693 LSFAGRLNLISSTLWSICNFWMAAFRLPRACIREIDKL 730
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 71.6 bits (174), Expect(2) = 3e-13
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F Y PK + + L ++ FADD +V G +SI + KV EF K SGL ++LE S
Sbjct: 687 FGYHPKCKTMG-----LTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKS 741
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
VYL+G R V F +G LP+RYL LPL++ R+ LP
Sbjct: 742 TVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLP 788
Score = 28.9 bits (63), Expect(2) = 3e-13
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LS+A R LI VL S ++W +AF L + E+E++
Sbjct: 805 LSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKM 842
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 63.2 bits (152), Expect(2) = 9e-13
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
FN+ PK E LN + +++FADD L+F + D+ S+ ++ Q+F SGL + E S
Sbjct: 672 FNFHPKCERLN-----ITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKS 726
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
+Y G + + H Q G LP RYL +PL S ++ P
Sbjct: 727 NIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKP 773
Score = 35.4 bits (80), Expect(2) = 9e-13
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -2
Query: 142 LLSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERLIR 20
LLS+A R +LIK +L S Q+YW+ F L+ + +E++ R
Sbjct: 789 LLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCR 829
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 61.6 bits (148), Expect(2) = 2e-12
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Frame = -3
Query: 504 NYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSR 325
+Y P+ +N L ++ FADD +VF G KSI + ++F S L+++LE S
Sbjct: 835 SYHPRCRNMN-----LTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKST 889
Query: 324 VYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
++++G + + +L F+ G LP++YL LPL++ R+ LP
Sbjct: 890 IFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLP 935
Score = 35.8 bits (81), Expect(2) = 2e-12
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R +LIK VL S ++W S F L A L E+E++
Sbjct: 952 LSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKM 989
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 65.5 bits (158), Expect(2) = 2e-12
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F + PK + L L ++ FADD ++ G +S+ + +V+ F K+SGL++N+E +
Sbjct: 92 FGFHPKCKNLG-----LTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKT 146
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRV 217
+Y +G H R ++ F G LP+RYL LPLV+ R+
Sbjct: 147 TLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRL 186
Score = 32.0 bits (71), Expect(2) = 2e-12
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R LI VL S ++W SAF L A L E+ +
Sbjct: 210 LSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSI 247
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 66.2 bits (160), Expect(2) = 3e-12
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = -3
Query: 504 NYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSR 325
+Y PK D+++ +++FADD +VF G S+ + + L +F SGL +N + +
Sbjct: 683 HYHPKT-----ADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTN 737
Query: 324 VYLSGHFRK*VLGNSH--FQAGNLPIRYLALPLVSFRVK 214
+YL+G L SH F LPIRYL LPL+S ++K
Sbjct: 738 LYLAGTDEVEALAISHYGFPISTLPIRYLGLPLMSRKLK 776
Score = 30.8 bits (68), Expect(2) = 3e-12
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R +LI V+ ++W S F+L L + ++E L
Sbjct: 794 LSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESL 831
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 65.9 bits (159), Expect(2) = 3e-12
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = -3
Query: 501 YRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSRV 322
Y PK D+++ +++FADD +VF G S+ + + L +F SGL +N + + +
Sbjct: 684 YHPKT-----ADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNL 738
Query: 321 YLSGHFRK*VLGNSH--FQAGNLPIRYLALPLVSFRVK 214
YL+G L SH F LPIRYL LPL+S ++K
Sbjct: 739 YLAGTDEVEALAISHYGFPISTLPIRYLGLPLMSRKLK 776
Score = 30.8 bits (68), Expect(2) = 3e-12
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R +LI V+ ++W S F+L L + ++E L
Sbjct: 794 LSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESL 831
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F + PK + L L ++ FADD ++ G +S+ + +V+ F K+SGL++N+E +
Sbjct: 604 FGFHPKCKNLG-----LTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLKINMEKT 658
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRV 217
+Y +G H R ++ F LP+RYL LPLV+ R+
Sbjct: 659 TLYTAGVSDHNRHMMISRYPFGLAQLPVRYLGLPLVTKRL 698
Score = 32.0 bits (71), Expect(2) = 1e-11
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R LI VL S ++W SAF L A L E+ +
Sbjct: 722 LSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSI 759
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 65.1 bits (157), Expect(2) = 2e-11
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F + PK + L L ++ FADD +V G +SI + +V EF K+SGL ++LE S
Sbjct: 334 FGFHPKCQRLG-----LTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKS 388
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
+Y++G ++ + F G LP+RYL LPLV+ R+ + P
Sbjct: 389 TLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSP 435
Score = 29.3 bits (64), Expect(2) = 2e-11
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 136 SFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
SFA R LIK VL S ++W +AF L + E+++L
Sbjct: 453 SFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKL 489
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = -3
Query: 465 VNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSRVYLS---GHFRK* 295
+NL ++ FADD L+F GD+ S+ + F S L+ N+ S+++L+ G+
Sbjct: 518 LNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDS 577
Query: 294 VLGNSHFQAGNLPIRYLALPLVSFRVK 214
VL ++F G P+RYL +PL++ +++
Sbjct: 578 VLQVTNFSLGTCPVRYLGIPLITSKLR 604
Score = 35.0 bits (79), Expect(2) = 3e-11
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -2
Query: 142 LLSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERLIR 20
+LSFA R +LI+ VL S Q YW+S +L L ++E+ +R
Sbjct: 626 VLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLR 666
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 63.2 bits (152), Expect(2) = 4e-11
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F Y P+ + L L ++ FADD ++ G +S+ + KVL +F + GL++ +E +
Sbjct: 408 FGYHPRCKTLG-----LTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKT 462
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRV 217
+YL+G H R+ + F G LP+RYL LPLV+ R+
Sbjct: 463 TLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRL 502
Score = 30.0 bits (66), Expect(2) = 4e-11
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R LI VL S ++W +AF L + E+ R+
Sbjct: 526 LSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRI 563
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 64.3 bits (155), Expect(2) = 5e-11
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F Y PK + L L ++ FADD +V G +S+ + +V F KQSGL++++ +
Sbjct: 205 FGYHPKCKNLG-----LTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKT 259
Query: 327 RVYLSGHFR---K*VLGNSHFQAGNLPIRYLALPLVSFR 220
+Y +G + K HF G LP+RYL LPLV+ R
Sbjct: 260 TIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKR 298
Score = 28.5 bits (62), Expect(2) = 5e-11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LS+A R L+ VL S ++W SAF L + E+++L
Sbjct: 323 LSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKL 360
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 63.5 bits (153), Expect(2) = 5e-11
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
FNY PK + L + N+ FADD L+F +GD+ S+ + + + F K +GL +N +
Sbjct: 58 FNYHPKCDKLK-----ITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKC 112
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
+ +G ++ +L S FQ G LP +YL +P+ S ++ +H P
Sbjct: 113 SLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSP 159
Score = 29.3 bits (64), Expect(2) = 5e-11
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 142 LLSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERLIR 20
LLS+A R +L+ V+ + +YW + F + L ++E + R
Sbjct: 175 LLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICR 215
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 59.7 bits (143), Expect(2) = 8e-11
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
FN+ PK E + L +++FADD L+F + D SI+ + F K SGL+ ++E S
Sbjct: 675 FNFHPKCER-----IKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKS 729
Query: 327 RVYLSG--HFRK*VLGNS-HFQAGNLPIRYLALPLVS 226
+Y G H L + G+LP RYL +PL S
Sbjct: 730 CIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLAS 766
Score = 32.3 bits (72), Expect(2) = 8e-11
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 142 LLSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERLIR 20
LLS+A R +L+K +L S Q+YW F L + +E R
Sbjct: 792 LLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCR 832
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F Y P+ + L ++ FADD +VF G S+ V + ++F SGL ++LE S
Sbjct: 942 FGYHPRCRNMG-----LTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKS 996
Query: 327 RVY---LSGHFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
++ +S +L F +G+LP+RYL LPL++ R+ LP
Sbjct: 997 TLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLP 1043
Score = 30.4 bits (67), Expect(2) = 2e-10
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LS+A R +L+ V+ S +W SAF L A + E+E++
Sbjct: 1060 LSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQI 1097
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = -3
Query: 504 NYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSR 325
+Y PKA L+ + +++FADD ++F G S+ + + L +F SGL++N + S
Sbjct: 682 HYHPKASNLS-----ISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSH 736
Query: 324 VYLSGHFRK*VLGNS--HFQAGNLPIRYLALPLVSFRVKAVHSLP 196
+YL+G + N+ F G LPIRYL LPL++ +++ P
Sbjct: 737 LYLAGLNQLESNANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEP 781
Score = 30.4 bits (67), Expect(2) = 2e-10
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 154 NEC*LLSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
N+C LSFA R +LI V+ ++W S FLL + +E L
Sbjct: 795 NKC--LSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESL 835
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 58.9 bits (141), Expect(2) = 2e-10
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = -3
Query: 465 VNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSRVY---LSGHFRK* 295
+ L ++ FADD ++ G +SI + +V F K SGL++++E S ++ LS R
Sbjct: 249 MGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQ 308
Query: 294 VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
+ + F+ G LPIRYL LPLV+ R+ +V P
Sbjct: 309 LHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAP 341
Score = 32.0 bits (71), Expect(2) = 2e-10
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LSFA R LI ++ S ++W SAF L A + E+E+L
Sbjct: 358 LSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKL 395
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 60.1 bits (144), Expect(2) = 4e-10
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = -3
Query: 507 FNYRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENS 328
F Y PK L+ + ++ FADD L+F +GD SI ++K EF + SGL+ NL S
Sbjct: 480 FKYHPKYAKLD-----VTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQANLNKS 534
Query: 327 RVYLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
+Y G R+ ++ + LP +YL +PL S ++ + P
Sbjct: 535 SIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYP 581
Score = 29.6 bits (65), Expect(2) = 4e-10
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 139 LSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERLIRN 17
LS+A R +L+K VL Q W+ F++ + +E L R+
Sbjct: 598 LSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRS 638
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 57.0 bits (136), Expect(2) = 6e-10
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = -3
Query: 501 YRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSRV 322
Y PK L + +++FADD ++F G S+ + + L++F SGL MN +++
Sbjct: 580 YHPKTSQLE-----ISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQL 634
Query: 321 YLSG--HFRK*VLGNSHFQAGNLPIRYLALPLVSFRVKAVHSLP 196
Y +G + + F+ G+LP+RYL LPL+S ++ P
Sbjct: 635 YHAGLSQSESDSMASYGFKLGSLPVRYLGLPLMSRKLTIAEYAP 678
Score = 32.0 bits (71), Expect(2) = 6e-10
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 142 LLSFAARPELIK*VLLSYQHYWSSAFLLALATLVEMERL 26
LLSFA R +L+ V+ ++W S+F+L L + ++E L
Sbjct: 694 LLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESL 732
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 67.8 bits (164), Expect(2) = 8e-10
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = -3
Query: 501 YRPKAEGLNGVDVNLYNIIFADDPLVFLKGDQKSIANVEKVLQEFGKQSGLEMNLENSRV 322
Y PK E + L ++ FADD +VF+ G Q SI V V +EF +SGL+++LE S +
Sbjct: 986 YHPKCE-----KIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTI 1040
Query: 321 YLSG---HFRK*VLGNSHFQAGNLPIRYLALPLVS 226
YL+G R L + F G LP+RYL LPL++
Sbjct: 1041 YLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLT 1075
Score = 20.8 bits (42), Expect(2) = 8e-10
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 191 LIELVRTKITVW 156
LIE V+TKI+ W
Sbjct: 1086 LIEAVKTKISSW 1097