BLASTX nr result

ID: Stemona21_contig00001968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00001968
         (515 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358683.1| PREDICTED: rhomboid protein 1, mitochondrial...    61   1e-07
ref|XP_004252251.1| PREDICTED: rhomboid protein 1, mitochondrial...    61   2e-07
gb|EMJ11407.1| hypothetical protein PRUPE_ppa015911mg [Prunus pe...    57   3e-06

>ref|XP_006358683.1| PREDICTED: rhomboid protein 1, mitochondrial-like [Solanum
           tuberosum]
          Length = 335

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = +1

Query: 307 LLQRGLRSLEASLQRRRFDAGQLFSSPRRYWR--YLTPTSDGVVLGLIATNVAVFLLWRN 480
           L+ R +  +   L RR F +  L  S RR WR  +   ++DGVVL LI TNVAVFLLWR 
Sbjct: 93  LVNRTVGLVRTQLGRRSFHSNFLVGSTRRSWRSSFGRFSTDGVVLCLILTNVAVFLLWRV 152

Query: 481 VDTEFMRKNFM 513
            D+ FM +NFM
Sbjct: 153 ADSRFMMRNFM 163


>ref|XP_004252251.1| PREDICTED: rhomboid protein 1, mitochondrial-like [Solanum
           lycopersicum]
          Length = 319

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/59 (57%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = +1

Query: 343 LQRRRFDAGQLFSSPRRYWR--YLTPTSDGVVLGLIATNVAVFLLWRNVDTEFMRKNFM 513
           L RR F +  L  S RR WR  Y   ++DGVVL LI TNVAVFLLWR  D+ FM +NFM
Sbjct: 89  LGRRNFHSNSLVGSIRRSWRSSYGRFSTDGVVLCLIFTNVAVFLLWRVADSRFMMRNFM 147


>gb|EMJ11407.1| hypothetical protein PRUPE_ppa015911mg [Prunus persica]
          Length = 344

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/72 (48%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +1

Query: 301 ESLLQRGLRSLEASLQRRRFDAGQLFSSPRRYWR-YLTPTSDG-VVLGLIATNVAVFLLW 474
           +SL    L  L A   ++ F     F+SPR  WR +    SDG VVLGLI  NVAVF+LW
Sbjct: 102 KSLSDFRLGFLRAQFPKQSFRFNPNFTSPRSPWRSWFRRVSDGDVVLGLIIANVAVFILW 161

Query: 475 RNVDTEFMRKNF 510
           R  D  FM KNF
Sbjct: 162 RIADPSFMAKNF 173


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