BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00001861
         (1498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   316   1e-83
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              313   9e-83
gb|EMT03118.1| DNA-directed RNA polymerase I subunit rpa49 [Aegi...   307   7e-81
dbj|BAJ90975.1| predicted protein [Hordeum vulgare subsp. vulgare]    305   3e-80
dbj|BAJ94402.1| predicted protein [Hordeum vulgare subsp. vulgar...   305   3e-80
gb|AFW60354.1| A49-like RNA polymerase I associated factor famil...   303   1e-79
ref|NP_001150836.1| LOC100284469 [Zea mays] gi|195642286|gb|ACG4...   302   3e-79
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   300   1e-78
gb|EAY88445.1| hypothetical protein OsI_09911 [Oryza sativa Indi...   298   5e-78
ref|XP_004979718.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   1e-77
ref|XP_003577359.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   2e-77
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   287   9e-75
gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Moru...   286   2e-74
ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|5...   285   4e-74
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   284   8e-74
gb|EOY23991.1| DNA-directed RNA polymerase I subunit rpa49, puta...   282   2e-73
ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603...   282   3e-73
ref|NP_001068274.1| Os11g0615100 [Oryza sativa Japonica Group] g...   282   3e-73
ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267...   281   4e-73
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616...   276   1e-71

>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
            vinifera]
          Length = 421

 Score =  316 bits (810), Expect = 1e-83
 Identities = 189/408 (46%), Positives = 258/408 (63%), Gaps = 17/408 (4%)
 Frame = +1

Query: 82   LDVEVEVLTETAEKAAPVVGYFPSGYDPTLSEETS----PRLRSFRHARFPNRLDLVV-- 243
            ++V++EV+ E  EK  P+VGYFPSG+DP   ++      P ++ FR+    NRL LVV  
Sbjct: 27   VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSP 86

Query: 244  DGGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGA 423
            +   V FVG SY+GEAA+  Q+CTYALGVLDKETQTLKI+PIA NKI RLEP V     +
Sbjct: 87   NDSKVNFVGTSYSGEAASA-QVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDAS 145

Query: 424  RDEHSEGL------EEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQI 585
             DE S  L      EE+  +M DLT+LYGTKK  T   K ++L   + DP +++ LD ++
Sbjct: 146  VDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL-NQKDDPRSQKDLDRKL 204

Query: 586  VDSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNG 765
             +  ++KEALE     + RNIPP+D TA  P++AY LD+II K E  +LLDIL+++++  
Sbjct: 205  KEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGV 264

Query: 766  DFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXX 945
            +  SS        +  FV NRI KL+ ++D+ +KTT ACI SYI HLLK+ +  S     
Sbjct: 265  EVESS-------AYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMD--- 314

Query: 946  XXXXXXXXXXXXXIPRVIYQKLMRMF-VDSESRTLSSEKRELLIGFILVLTLFADGFRTD 1122
                         IP ++ QK   MF +DS+SR L+ EK++LLI ++LVLTL+AD FRTD
Sbjct: 315  -----ASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTD 369

Query: 1123 PSDIARDLKVPDKSLAPYYLQLGCKF-SQG---VMTLPVPLDFPELKK 1254
            PSDIARDL++    L  ++  LGCK  SQ    + TLPVPL FP L++
Sbjct: 370  PSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPRLRQ 417


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  313 bits (803), Expect = 9e-83
 Identities = 188/404 (46%), Positives = 254/404 (62%), Gaps = 17/404 (4%)
 Frame = +1

Query: 94   VEVLTETAEKAAPVVGYFPSGYDPTLSEETS----PRLRSFRHARFPNRLDLVV--DGGN 255
            +EV+ E  EK  P+VGYFPSG+DP   ++      P ++ FR+    NRL LVV  +   
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDSK 60

Query: 256  VEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEH 435
            V FVG SY+GEAA+  Q+CTYALGVLDKETQTLKI+PIA NKI RLEP V     + DE 
Sbjct: 61   VNFVGTSYSGEAASA-QVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEP 119

Query: 436  SEGL------EEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSE 597
            S  L      EE+  +M DLT+LYGTKK  T   K ++L   + DP +++ LD ++ +  
Sbjct: 120  SSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL-NQKDDPRSQKDLDRKLKEVV 178

Query: 598  VDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFAS 777
            ++KEALE     + RNIPP+D TA  P++AY LD+II K E  +LLDIL+++++  +  S
Sbjct: 179  INKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVES 238

Query: 778  STKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXXXXX 957
            S        +  FV NRI KL+ ++D+ +KTT ACI SYI HLLK+ +  S         
Sbjct: 239  S-------AYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMD------- 284

Query: 958  XXXXXXXXXIPRVIYQKLMRMF-VDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDI 1134
                     IP ++ QK   MF +DS+SR L+ EK++LLI ++LVLTL+AD FRTDPSDI
Sbjct: 285  -ASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDI 343

Query: 1135 ARDLKVPDKSLAPYYLQLGCKF-SQG---VMTLPVPLDFPELKK 1254
            ARDL++    L  ++  LGCK  SQ    + TLPVPL FP L++
Sbjct: 344  ARDLRMSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPRLRQ 387


>gb|EMT03118.1| DNA-directed RNA polymerase I subunit rpa49 [Aegilops tauschii]
          Length = 421

 Score =  307 bits (787), Expect = 7e-81
 Identities = 189/399 (47%), Positives = 239/399 (59%), Gaps = 13/399 (3%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLSEETSPRLRSFRHARFPNRLDLVVD--GGNVE 261
            +EV V       AAPVVGYFP+GYDP  + E  PR+R FRH +  NR++LVV   GG  +
Sbjct: 27   IEVTVDASFPGAAAPVVGYFPTGYDPLAAAEP-PRVRLFRHEKHHNRVELVVGAPGGGPD 85

Query: 262  FVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEHS- 438
            FVGRSYAGEAAA PQLC YALGVLDK T TLKI+PIA NKILRLEP    +  A  + S 
Sbjct: 86   FVGRSYAGEAAA-PQLCGYALGVLDKATGTLKIVPIASNKILRLEPHFEAQQPAHSQQSA 144

Query: 439  ----EGLEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSEVDK 606
                  + +      DLT  YGTKKD+  D+KW+SL E R DP+A   LD  + +S+   
Sbjct: 145  AEAGSSVADTELNRQDLTQAYGTKKDKDKDNKWKSLKEQRNDPSAY--LDLDLGESKTTA 202

Query: 607  EALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFASSTK 786
            +A +       RNIPP+D  A   EKAY  DEII K  R HLLDI+   ES G+F     
Sbjct: 203  DATDSEASVEVRNIPPYDPAADTSEKAYLFDEIIPKNIRPHLLDIVGHFES-GEFGLK-- 259

Query: 787  FWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXXXXXXXX 966
                 G+  FV NR++KL+ ++ +D +   A ILSYITHLL  +   S            
Sbjct: 260  -----GYGSFVSNRVNKLQELQGEDQER-LAWILSYITHLLSLLARNSSMSKQKRKEKDQ 313

Query: 967  XXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIARDL 1146
                  IP+ +++KL+ MF +  S +LS+EK ELL+ +ILVLTLFAD FR++P+DI  DL
Sbjct: 314  TIRGPMIPQAVHRKLLLMFTEPGSSSLSTEKHELLVNYILVLTLFADDFRSEPTDICVDL 373

Query: 1147 KVPDKSLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
            K+  + L PYY QLGCK      F    MTLP PL FP+
Sbjct: 374  KMNRQMLKPYYDQLGCKSVSTGAFKPFFMTLPAPLKFPQ 412


>dbj|BAJ90975.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 431

 Score =  305 bits (781), Expect = 3e-80
 Identities = 192/402 (47%), Positives = 239/402 (59%), Gaps = 16/402 (3%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLSEETSPRLRSFRHARFPNRLDLVVD--GGNVE 261
            +EV V       AAPVVGYFP+GYDP L+    PR R FRH +  NR++LVVD  GG  +
Sbjct: 38   IEVTVDASFPGAAAPVVGYFPTGYDP-LAAADPPRARLFRHEKHHNRVELVVDAPGGGPD 96

Query: 262  FVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEHS- 438
            FVGRSYAGEAAA PQLC YALGVLDK T TLKI+PIA NKILRLEP    +  A  + S 
Sbjct: 97   FVGRSYAGEAAA-PQLCGYALGVLDKATGTLKIVPIASNKILRLEPHFEVQQPAHSQQSA 155

Query: 439  ----EGLEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLD---SQIVDSE 597
                  + +      DLT  YGTKKD+  D+KW+SL E R DP+A   LD   S+  D+ 
Sbjct: 156  AEACSSVADTELNRQDLTQAYGTKKDKDKDNKWKSLKEQRNDPSAYLDLDLGESKTADAT 215

Query: 598  VDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFAS 777
              + ++E       RNIPP+D  A   EKAY  DEII K  R HLLDI+   ES G+F  
Sbjct: 216  DSQASME------VRNIPPYDPAADTSEKAYLFDEIIPKNIRPHLLDIVGHFES-GEFGL 268

Query: 778  STKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXXXXX 957
                    G+  FV NR++KL  ++ +D +   A ILSYITHLL  +   S         
Sbjct: 269  K-------GYGSFVSNRVNKLHELQGEDQER-LAWILSYITHLLSLLARNSSMSKQKRKE 320

Query: 958  XXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIA 1137
                     IP+ +++KL+ MF +  S +LS+EK ELLI +ILVLTLFAD FR++P+DI 
Sbjct: 321  KDQTIRGPMIPQAVHRKLLLMFTEPGSSSLSTEKYELLINYILVLTLFADDFRSEPTDIC 380

Query: 1138 RDLKVPDKSLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
             DLK+  + L PYY QLGCK      F    MTLP PL FP+
Sbjct: 381  ADLKMNRQMLKPYYDQLGCKSVSTGAFKPFFMTLPAPLKFPQ 422


>dbj|BAJ94402.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326529171|dbj|BAK00979.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 433

 Score =  305 bits (781), Expect = 3e-80
 Identities = 192/402 (47%), Positives = 239/402 (59%), Gaps = 16/402 (3%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLSEETSPRLRSFRHARFPNRLDLVVD--GGNVE 261
            +EV V       AAPVVGYFP+GYDP L+    PR R FRH +  NR++LVVD  GG  +
Sbjct: 40   IEVTVDASFPGAAAPVVGYFPTGYDP-LAAADPPRARLFRHEKHHNRVELVVDAPGGGPD 98

Query: 262  FVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEHS- 438
            FVGRSYAGEAAA PQLC YALGVLDK T TLKI+PIA NKILRLEP    +  A  + S 
Sbjct: 99   FVGRSYAGEAAA-PQLCGYALGVLDKATGTLKIVPIASNKILRLEPHFEVQQPAHSQQSA 157

Query: 439  ----EGLEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLD---SQIVDSE 597
                  + +      DLT  YGTKKD+  D+KW+SL E R DP+A   LD   S+  D+ 
Sbjct: 158  AEACSSVADTELNRQDLTQAYGTKKDKDKDNKWKSLKEQRNDPSAYLDLDLGESKTADAT 217

Query: 598  VDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFAS 777
              + ++E       RNIPP+D  A   EKAY  DEII K  R HLLDI+   ES G+F  
Sbjct: 218  DSQASME------VRNIPPYDPAADTSEKAYLFDEIIPKNIRPHLLDIVGHFES-GEFGL 270

Query: 778  STKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXXXXX 957
                    G+  FV NR++KL  ++ +D +   A ILSYITHLL  +   S         
Sbjct: 271  K-------GYGSFVSNRVNKLHELQGEDQER-LAWILSYITHLLSLLARNSSMSKQKRKE 322

Query: 958  XXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIA 1137
                     IP+ +++KL+ MF +  S +LS+EK ELLI +ILVLTLFAD FR++P+DI 
Sbjct: 323  KDQTIRGPMIPQAVHRKLLLMFTEPGSSSLSTEKYELLINYILVLTLFADDFRSEPTDIC 382

Query: 1138 RDLKVPDKSLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
             DLK+  + L PYY QLGCK      F    MTLP PL FP+
Sbjct: 383  ADLKMNRQMLKPYYDQLGCKSVSTGAFKPFFMTLPAPLKFPQ 424


>gb|AFW60354.1| A49-like RNA polymerase I associated factor family protein [Zea mays]
          Length = 458

 Score =  303 bits (777), Expect = 1e-79
 Identities = 184/394 (46%), Positives = 239/394 (60%), Gaps = 20/394 (5%)
 Frame = +1

Query: 124  AAPVVGYFPSGYDPTLSE---ETSPRLRSFRHARFPNRLDLVV--DGGNVEFVGRSYAGE 288
            AAPVVGYFPSGYDP  +    E++P  + FRH + P  +DLVV   GG  +FVGRSYAGE
Sbjct: 68   AAPVVGYFPSGYDPLTTAAGAESAPGTQLFRHEKHPTWVDLVVRSPGGGHDFVGRSYAGE 127

Query: 289  AAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEHSEGLEEEVR-- 462
            AA  PQ+C YALGVLDK + TL+I+PIAG KILRLEP +  +  A  +HSE   E     
Sbjct: 128  AAV-PQVCDYALGVLDKASGTLRIVPIAGKKILRLEPHLEVQHPAHSQHSEVASEAASAA 186

Query: 463  -----KMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSEVDKEALEDAK 627
                 K+ DLT +YG K DR  D+KWRSL E R DP+A E +D  I ++ V+    ++  
Sbjct: 187  GNDELKVQDLTMMYGAKTDRDKDNKWRSLKEQRNDPSAYEDIDLGISETNVNANDRQEPV 246

Query: 628  MGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFASSTKFWQDNGF 807
            +   RNIPP+D TA   E AY LDEII K+ R HLL+I+   ES G+ +S        G+
Sbjct: 247  L--VRNIPPYDPTADTSENAYLLDEIIPKSMREHLLEIVRHFES-GEISSK-------GY 296

Query: 808  PMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSR--SRXXXXXXXXXXXXXX 981
              FV  R+HKL+ ++ +D K  FA ILSYI HLL  +       +R              
Sbjct: 297  GSFVSKRVHKLKELQGEDKKR-FAWILSYIQHLLSLLARNGSMSNRKWKGRNENQISHGP 355

Query: 982  XIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIARDLKVPDK 1161
              P+ +Y++L+ MF +  S  + +EK+ELL  +ILVLTLFAD FR++PSDI  DLK+  +
Sbjct: 356  ATPQAVYRRLLFMFTEPGSSVMPTEKKELLTNYILVLTLFADDFRSNPSDICEDLKMTRQ 415

Query: 1162 SLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
            +L PYY QLGCK      F    MTLP PL FP+
Sbjct: 416  NLKPYYDQLGCKSVTEGAFKSTFMTLPAPLKFPK 449


>ref|NP_001150836.1| LOC100284469 [Zea mays] gi|195642286|gb|ACG40611.1| A49-like RNA
            polymerase I associated factor family protein [Zea mays]
          Length = 442

 Score =  302 bits (773), Expect = 3e-79
 Identities = 183/394 (46%), Positives = 238/394 (60%), Gaps = 20/394 (5%)
 Frame = +1

Query: 124  AAPVVGYFPSGYDPTLSE---ETSPRLRSFRHARFPNRLDLVV--DGGNVEFVGRSYAGE 288
            AAPVVGYFPSGYDP  +    E++P  + FRH + P  +DLVV   GG  +FVGRSYAGE
Sbjct: 52   AAPVVGYFPSGYDPLTTAAGAESAPGTQLFRHEKHPTWVDLVVRSPGGGHDFVGRSYAGE 111

Query: 289  AAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEHSEGLEEEVR-- 462
            AA  PQ+C YALGVLDK + TL+I+PIAG KILRLEP +  +  A  +HSE   E     
Sbjct: 112  AAV-PQVCDYALGVLDKASGTLRIVPIAGKKILRLEPHLEVQHPAHSQHSEVASEAASAA 170

Query: 463  -----KMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSEVDKEALEDAK 627
                 K+ DLT +YG K DR  D+KWRSL E R DP+A E +D  I ++ V+    ++  
Sbjct: 171  GNDELKVQDLTMMYGAKTDRDKDNKWRSLKEQRNDPSAYEDIDLGISETNVNANDRQEPV 230

Query: 628  MGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFASSTKFWQDNGF 807
            +   RNIPP+D TA   E AY LDEII K+ R H L+I+   ES G+ +S        G+
Sbjct: 231  L--VRNIPPYDPTADTSENAYLLDEIIPKSMREHFLEIVRHFES-GEISSK-------GY 280

Query: 808  PMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSR--SRXXXXXXXXXXXXXX 981
              FV  R+HKL+ ++ +D K  FA ILSYI HLL  +       +R              
Sbjct: 281  GSFVSKRVHKLKELQGEDKKR-FAWILSYIQHLLSLLARNGSMSNRKWKGRNENQISHGP 339

Query: 982  XIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIARDLKVPDK 1161
              P+ +Y++L+ MF +  S  + +EK+ELL  +ILVLTLFAD FR++PSDI  DLK+  +
Sbjct: 340  ATPQAVYRRLLFMFTEPGSSVMPTEKKELLTNYILVLTLFADDFRSNPSDICEDLKMTRQ 399

Query: 1162 SLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
            +L PYY QLGCK      F    MTLP PL FP+
Sbjct: 400  NLKPYYDQLGCKSVTEGAFKSTFMTLPAPLKFPK 433


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
            gi|449480549|ref|XP_004155927.1| PREDICTED:
            uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  300 bits (768), Expect = 1e-78
 Identities = 170/408 (41%), Positives = 245/408 (60%), Gaps = 17/408 (4%)
 Frame = +1

Query: 82   LDVEVEVLTETAEKAAPVVGYFPSGYDP----TLSEETSPRLRSFRHARFPNRLDLVVD- 246
            +D +++VL+   +K  PVVGYFPSG+DP       +  S R R ++H   PNR+ LVV  
Sbjct: 41   MDAKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVSP 100

Query: 247  -GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEP-------T 402
             G NV+FVG +Y GEA AG Q CTYALGVLDK TQ+LKI+PIA N I RL+P       T
Sbjct: 101  TGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDVT 160

Query: 403  VTDRPGARDEHSEGLEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQ 582
              + P   +E   G +++  +M +LT+LYGTKK +    K  +L +   DP  +  LD +
Sbjct: 161  ENESPSVANEELSG-QDKANRMRELTALYGTKKSKKQAQKLHAL-KQEDDPETKSDLDGR 218

Query: 583  IVDSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESN 762
            + +  V+KEALE  +    RNIP ++ +A  P++AYPLD+IILK E   L D+   ++  
Sbjct: 219  MKNVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQET 278

Query: 763  GDFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRX 942
             + +++        +P FV NRI+KL++I+D+++K    CI SYITHL+K+ +  S    
Sbjct: 279  AEISAT--------YPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMG-- 328

Query: 943  XXXXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTD 1122
                          IP ++ QK   MF  +ESR LS++K  LLI  +LVL+LFAD F +D
Sbjct: 329  -----DVSSAKGHKIPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSD 383

Query: 1123 PSDIARDLKVPDKSLAPYYLQLGCKF----SQGVMTLPVPLDFPELKK 1254
            P+DIA+DL+     L  ++  LGCKF    +  + TLP+PL FPEL++
Sbjct: 384  PADIAKDLRTSPYDLRLHFDNLGCKFIRKNNLSLATLPIPLQFPELRQ 431


>gb|EAY88445.1| hypothetical protein OsI_09911 [Oryza sativa Indica Group]
          Length = 438

 Score =  298 bits (762), Expect = 5e-78
 Identities = 184/409 (44%), Positives = 241/409 (58%), Gaps = 23/409 (5%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLSE-----ETSPRLRSFRHARFPNRLDLVVD-- 246
            V+  +    A  AAPVV YFP+GYDP  +        +PR R FRH + P+R++LVV   
Sbjct: 34   VDASLTGAAAAGAAPVVAYFPTGYDPLAAGGGRKGREAPRTRLFRHTKHPSRIELVVGAA 93

Query: 247  ---GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRP 417
               GG  +FVGRSYAGEA   PQL  YALGVLDK + TLK++PIA NKILRLEP +  + 
Sbjct: 94   TGGGGGPDFVGRSYAGEAVL-PQLTGYALGVLDKASGTLKVVPIAANKILRLEPHLEVQK 152

Query: 418  GARDEHSEGLEEEVR-------KMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLD 576
             A  +HS  + E V        K+ D+T  +GT+KD+  D KW+SL E R DP+A   LD
Sbjct: 153  LAHSQHSGAVGEAVSSAGDADLKVQDITKAFGTQKDKAKDIKWQSLNEQRNDPSAFMDLD 212

Query: 577  SQIVDSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVE 756
                D+ V      +++  T RNIPP+D  A   E+AY  DEII K+ R HL+DI+   E
Sbjct: 213  LGNADTSV---GANESQEPTVRNIPPYDPAADTSERAYLFDEIIPKSIRPHLVDIIGHFE 269

Query: 757  SNGDFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRS 936
            S G+ +S        G+  FV NR++KL+ ++ +D K   A ILSYITHLL  +   S S
Sbjct: 270  S-GEISSK-------GYGSFVSNRVNKLQELQGED-KERLAWILSYITHLLSLLARNS-S 319

Query: 937  RXXXXXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFR 1116
                            IP+ +Y+K++ MF +  S  LS+EK ELLI +ILVLTL+AD FR
Sbjct: 320  MSKRHRKENQATSGPVIPQYVYRKMVLMFTEPGSSALSTEKHELLINYILVLTLYADDFR 379

Query: 1117 TDPSDIARDLKVPDKSLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
            +DP DI  DLK+  + + PYY QLGCK      F   VMTLP PL FP+
Sbjct: 380  SDPKDICEDLKMTRQMIKPYYDQLGCKSSSAGAFKSSVMTLPAPLKFPK 428


>ref|XP_004979718.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Setaria
            italica]
          Length = 520

 Score =  296 bits (759), Expect = 1e-77
 Identities = 184/402 (45%), Positives = 233/402 (57%), Gaps = 24/402 (5%)
 Frame = +1

Query: 112  TAEKAAPVVGYFPSGYDPTLS-------EETSPRLRSFRHARFPNRLDLVV--DGGNVEF 264
            TA   AP V YFP+GYDP  +       +E++P  R FRH + P  +DLVV   GG  +F
Sbjct: 124  TAAAPAPAVAYFPTGYDPLAAAAVAAEEDESAPNARLFRHEKHPTWVDLVVGSSGGGPDF 183

Query: 265  VGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEHSEG 444
            VGRSYAGEAA  PQLC YALGVLDK + TL+++PIA NKILRLEP +  +  A  +HSE 
Sbjct: 184  VGRSYAGEAAT-PQLCEYALGVLDKASGTLRVVPIAANKILRLEPHLEVQQPAHSQHSEV 242

Query: 445  LEE-------EVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSEVD 603
              E       +  K+ DLT +YGTK DR  D+KWRSL E R DP+A E +D    +   +
Sbjct: 243  ASEAGSVAGNDELKVQDLTMMYGTKTDRDKDNKWRSLNEQRNDPSAYEDIDLGTSNVHTN 302

Query: 604  KEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFASST 783
                ++ +    RNIPP+D TA   EKAY LDEII K  R HLL+I++  ES G  +S  
Sbjct: 303  ----DNQEPVIVRNIPPYDPTADTSEKAYLLDEIIPKNMRQHLLEIVDHFES-GQISSK- 356

Query: 784  KFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPS--RSRXXXXXX 957
                  G+  FV NR+ KL+ ++  D K   A ILSYI HLL   E              
Sbjct: 357  ------GYSSFVSNRVQKLQELQGQD-KERLAWILSYIQHLLSLYERNGCMSKHHRKHRK 409

Query: 958  XXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIA 1137
                      P  +Y+ L+ +F +  S ++SSEK ELLI +ILVLTLFAD FR+DP DI 
Sbjct: 410  ENKANHGPGTPLAVYRNLLLIFTEPGSSSMSSEKNELLINYILVLTLFADDFRSDPKDIC 469

Query: 1138 RDLKVPDKSLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
             DLK+  + L PYY QLGCK      F    MTLP PL+FP+
Sbjct: 470  ADLKMTRQMLKPYYDQLGCKSVSAGAFKSTFMTLPAPLNFPQ 511


>ref|XP_003577359.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
            [Brachypodium distachyon]
          Length = 472

 Score =  296 bits (758), Expect = 2e-77
 Identities = 187/402 (46%), Positives = 239/402 (59%), Gaps = 14/402 (3%)
 Frame = +1

Query: 82   LDVEVEVLTETAEKAAPVVGYFPSGYDPTLSEETSPRLRSFRHARFPNRLDLVVD--GGN 255
            +DV V+  +  A  AAPVVGYFP+GYDP  + E  PR R FRH +  NR+DLVV   GG 
Sbjct: 76   IDVTVDA-SFAAAAAAPVVGYFPTGYDPLAAAEP-PRARLFRHEKHSNRVDLVVSAPGGG 133

Query: 256  VEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDEH 435
            ++FVGRSYAGE AA P LC YALGVLDK + TLK++PIA NKILRLEP   ++  A  E 
Sbjct: 134  LDFVGRSYAGETAA-PHLCGYALGVLDKASGTLKVVPIAANKILRLEPHFEEQKPAHSEQ 192

Query: 436  SEG------LEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSE 597
            S           EV++   LT  YGT+KD+  D+KW+SL E   DP A   L  ++ DS+
Sbjct: 193  SAAEAGSSVANTEVKRQ-QLTEAYGTQKDKVKDNKWKSLKEETNDPDAY--LGLELGDSK 249

Query: 598  VDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGDFAS 777
               +A +     T RNIPP+D  A   EKAY  DEII K  R HLL+I+   ES G+ +S
Sbjct: 250  TTADATDSQASVTVRNIPPYDPAADTSEKAYLFDEIIPKNIRPHLLEIVGHFES-GEISS 308

Query: 778  STKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXXXXX 957
                    G+  FV NR++KL+++K +  K   A ILSYIT+LL    L   S       
Sbjct: 309  K-------GYGSFVSNRVNKLQHLKGEG-KERLAWILSYITYLLSL--LARNSAMSKRDR 358

Query: 958  XXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIA 1137
                     IP  +++ L+ MF +  S  LS+EK ELLI +ILVLTL+AD F + P+DI 
Sbjct: 359  KENLSHGPTIPPNVHRNLLLMFTEPGSSALSTEKHELLINYILVLTLYADNFTSSPADIC 418

Query: 1138 RDLKVPDKSLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
             DLK+  + L PYYLQLGCK      F   V+TLP PL FP+
Sbjct: 419  EDLKMTREMLKPYYLQLGCKYGSAGAFKPSVITLPAPLKFPQ 460


>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
            communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
            polymerase I 49 kDa polypeptide, putative [Ricinus
            communis]
          Length = 481

 Score =  287 bits (734), Expect = 9e-75
 Identities = 184/433 (42%), Positives = 249/433 (57%), Gaps = 46/433 (10%)
 Frame = +1

Query: 82   LDVEVEVLTETAEKAAPVVGYFPSGYDPTLSEETS-----------------PRLRSFRH 210
            L+V++EV+ +  +K  P+VGYFPSGY P+   E++                 P ++ +R+
Sbjct: 58   LNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYRN 117

Query: 211  A----------------RFPNRLDLVV--DGGNVEFVGRSYAGEAAAGPQLCTYALGVLD 336
            A                R   R++LVV  +G NV+FVG+SY GEA A  QLCTYALGVLD
Sbjct: 118  AQRTKIEKSSNERNEKWRSSERMELVVSPNGSNVDFVGKSYKGEATAA-QLCTYALGVLD 176

Query: 337  KETQTLKIMPIAGNKILRLEPTVTDRPGARDEHS----EGLEEE---VRKMADLTSLYGT 495
            K+T+TLKIMPIAGNKI RLEP +     +  E S    E L +E   VRK   LT  YGT
Sbjct: 177  KKTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSKENMAVRKKT-LTDTYGT 235

Query: 496  KKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSEVDKEALEDAKMGTPRNIPPHDTTAVV 675
            KK   T  K   ++    +P +R+ LD +I +  V+K ALED      RNIPPH+T+A  
Sbjct: 236  KKS-ITQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPHNTSATT 294

Query: 676  PEKAYPLDEIILKAERGHLLDILEMVESNGDFASSTKFWQDNGFPMFVYNRIHKLRNIKD 855
            P++AYPL  IIL  E  +L D+ E++++    A        N +P+FV NRIHKLR I+D
Sbjct: 295  PQEAYPLGRIILTGEWDYLEDLYEILQAGEGAAI-------NAYPVFVRNRIHKLREIQD 347

Query: 856  DDDKTTFACILSYITHLLKFMELPSRSRXXXXXXXXXXXXXXXIPRVIYQKLMRMFVDSE 1035
            + ++ T++ I SYITHLLKF +L S                   P ++ QK M MF   E
Sbjct: 348  EVERKTYSRIFSYITHLLKFKDLHSMD-------GVSSAKNHKFPSILRQKFMGMFT-PE 399

Query: 1036 SRTLSSEKRELLIGFILVLTLFADGFRTDPSDIARDLKVPDKSLAPYYLQLGCKF----S 1203
            SR L  EK +LLI ++LVL+L+AD FRTDP+DIA+DL+V    +  ++  LGCK      
Sbjct: 400  SRKLPVEKIDLLISYVLVLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENK 459

Query: 1204 QGVMTLPVPLDFP 1242
              + TLPVPL FP
Sbjct: 460  LSLATLPVPLKFP 472


>gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
          Length = 438

 Score =  286 bits (731), Expect = 2e-74
 Identities = 165/406 (40%), Positives = 238/406 (58%), Gaps = 15/406 (3%)
 Frame = +1

Query: 82   LDVEVEVLTETAEKAAPVVGYFPSGYDPTLSEETSPRL---RSFRHARFPNRLDLVV--D 246
            ++  ++V+    E+A P+VGYFPSG+DP   ++ S      R FR+   P RL LVV  +
Sbjct: 43   VEATIQVVQNQPERAPPLVGYFPSGFDPKDGDDESSATAMARVFRNRNKPKRLQLVVSPN 102

Query: 247  GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTV------T 408
            G NV+FVG +Y+GEA AG Q C YALGVLDKETQTLKI+PIA NKI RLEP V       
Sbjct: 103  GANVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRGLRLPN 162

Query: 409  DRPGARDEHSEGLEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIV 588
               G+  E       +  K+  LT  YGT K    ++K R  +    DP  ++ +D +I 
Sbjct: 163  KDSGSLAEGERSALSKSEKIKGLTDRYGTNKS-IREAKKRDALYQNDDPETQKDMDEKIK 221

Query: 589  DSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGD 768
               + K+ALE  ++ T RNIPP++  A   ++AYP+++IILK E   L DI  +++   +
Sbjct: 222  QIVIKKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLLQEEAE 281

Query: 769  FASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXX 948
              S       + +P F+ NRI  LR  +D+++K   ACI SYITHL+KF +L S      
Sbjct: 282  LKS-------DDYPSFISNRIQNLRETEDEEEKKRRACIFSYITHLIKFKDLHSMD---- 330

Query: 949  XXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPS 1128
                         P ++ QK   MF+ SE + L+S++ +LLI ++LVLTL+AD F+T+ +
Sbjct: 331  ---GVSSAKRHKFPSILRQKFSAMFLSSEVKKLASKENDLLISYVLVLTLYADRFQTNLT 387

Query: 1129 DIARDLKVPDKSLAPYYLQLGCKF----SQGVMTLPVPLDFPELKK 1254
            DIA+DL++   +L  +Y QLGCK     +    TLPVPL FP+L++
Sbjct: 388  DIAKDLRMTSVTLRVHYEQLGCKLVRQNNLWFATLPVPLQFPDLRQ 433


>ref|XP_002339506.1| predicted protein [Populus trichocarpa]
            gi|566150007|ref|XP_006369274.1| hypothetical protein
            POPTR_0001s20580g [Populus trichocarpa]
            gi|550347732|gb|ERP65843.1| hypothetical protein
            POPTR_0001s20580g [Populus trichocarpa]
          Length = 472

 Score =  285 bits (729), Expect = 4e-74
 Identities = 177/431 (41%), Positives = 249/431 (57%), Gaps = 40/431 (9%)
 Frame = +1

Query: 82   LDVEVEVLTETAEKAAPVVGYFPSGYDPTLSEETS------------PRLRSFRHA---- 213
            LDV++E++    +K  PVVGYFPSGY+P  + + +            P ++ +R+A    
Sbjct: 54   LDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNAQRAK 113

Query: 214  ------------RFPNRLDLVV--DGGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQT 351
                        R   RL+LVV  +G NVEFVG SY GEA A  QLCTYALGVLDK TQT
Sbjct: 114  VEKSSGEKNEKGRTSERLELVVSPNGSNVEFVGNSYKGEAMAA-QLCTYALGVLDKATQT 172

Query: 352  LKIMPIAGNKILRLEPTVTDRPGARDEHSE------GLEEEVRKMADLTSLYGTKKDRTT 513
            LKIMPIAGNKILRLEP +     A  EH+         E+   ++  L   YG KK    
Sbjct: 173  LKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKSIIQ 232

Query: 514  DSKWRSLIEHRKDPTAREPLDSQIVDSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYP 693
            D K ++L     DP +++ L  +I ++ ++K+ALE     + RNIPP++++A+ P++AYP
Sbjct: 233  DKKMQAL-RKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYP 291

Query: 694  LDEIILKAERGHLLDILEMVESNGDFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTT 873
            LD IIL  E   L DI ++++  G+ AS       N +P FV NRI KLR I+D+ +K  
Sbjct: 292  LDGIILTGEWDFLEDIYKILQVGGEVAS-------NAYPTFVCNRIQKLREIQDEVEKKR 344

Query: 874  FACILSYITHLLKFMELPSRSRXXXXXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSS 1053
             +CI SYITHLLKF +  S                   P +I QK   MF   E+R LS 
Sbjct: 345  LSCIFSYITHLLKFKDQHSMD-------GAASARNHQFPSIIRQKFFEMF-KPETRRLSV 396

Query: 1054 EKRELLIGFILVLTLFADGFRTDPSDIARDLKVPDKSLAPYYLQLGCKF----SQGVMTL 1221
            +K +LLI ++LVLTL+AD FRT P+D++ DL++   ++  +Y  LGCK     ++ ++TL
Sbjct: 397  DKIDLLISYVLVLTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTL 456

Query: 1222 PVPLDFPELKK 1254
             VPL+FP+ K+
Sbjct: 457  SVPLEFPQPKR 467


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine
            max]
          Length = 424

 Score =  284 bits (726), Expect = 8e-74
 Identities = 176/403 (43%), Positives = 236/403 (58%), Gaps = 12/403 (2%)
 Frame = +1

Query: 82   LDVEVEVLTETAEKAAPVVGYFPSGYDPTLSEETSP-RLRSFRHARFPNRLDLVV--DGG 252
            ++VEVEV+ E   K  PVVGYFPSG+DP  +    P   + +RH   P RL+LVV     
Sbjct: 36   IEVEVEVVREHPNKTPPVVGYFPSGFDPVKNHGGGPSNFQVYRHRSMPKRLELVVRPPRS 95

Query: 253  NVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGARDE 432
            +VEFVG SYAGEAAA  +   YALGVLDKE  TLK++PIAGNKI RLEP V       +E
Sbjct: 96   SVEFVGTSYAGEAAARHR-AKYALGVLDKEAGTLKVVPIAGNKIFRLEPKVKGVGAFENE 154

Query: 433  HSEGLEEEV---RKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIVDSEVD 603
             +    EE+   +K A+ TS++GTKKD    +K +  +   +DP ++  LD ++    V+
Sbjct: 155  PANSTLEEMTQQQKFAETTSIWGTKKD-IEKAKKKLALRQDEDPDSQRNLDVKMKSVTVN 213

Query: 604  KEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVE--SNGDFAS 777
            K+ALE  +    RNIPP+D +A  P++AY LD+IILK E  +L DI   ++     DF++
Sbjct: 214  KKALESTESHVSRNIPPYDASATTPQEAYILDKIILKGEWDYLEDIYNNLQRGEEADFSA 273

Query: 778  STKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXXXXX 957
                     +P FV NRI +LR IKD+ +K   +CI SYI HL+KF +  S         
Sbjct: 274  ---------YPTFVRNRIERLRKIKDESEKKQLSCIFSYINHLIKFKDQHS--------F 316

Query: 958  XXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPSDIA 1137
                     IP ++  K   MF  SES+ L  EK  LLI ++LVLTLF+D FRTD +DIA
Sbjct: 317  DVLSAKGHKIPNILRHKFSNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIA 376

Query: 1138 RDLKVPDKSLAPYYLQLGCKFSQG----VMTLPVPLDFPELKK 1254
            +DL +    +   Y  LGCK S+       TLPVPL FPEL++
Sbjct: 377  KDLSMNILPVRQLYEHLGCKISRQKNIFYATLPVPLKFPELRQ 419


>gb|EOY23991.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
            cacao]
          Length = 457

 Score =  282 bits (722), Expect = 2e-73
 Identities = 173/419 (41%), Positives = 239/419 (57%), Gaps = 34/419 (8%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLSE--------------------ETSPRLRSFR 207
            V++++  +   K  P+V YFPSGY+P  ++                       PR++ +R
Sbjct: 45   VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVYR 104

Query: 208  HA--RFPNRLDLVVD--GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAG 375
            +   R  NRL +VV   G NV+FVG +Y+GEAAA  Q+C Y+LGVLD+ET+TLKI+PIA 
Sbjct: 105  NMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAA-QVCRYSLGVLDRETRTLKIIPIAS 163

Query: 376  NKILRLEPTVTDRPGARDEHSEGLEEEVR------KMADLTSLYGTKKDRTTDSKWRSLI 537
            NKI RLEP V     A  + S  ++ E+       KM +LT+LYGTKKDR       +L 
Sbjct: 164  NKIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNNL- 222

Query: 538  EHRKDPTAREPLDSQIVDSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKA 717
            +   DP +++ LD +I     +KEAL +      RNIPPHD++A  P +AYPLD+IILK 
Sbjct: 223  KKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILKG 282

Query: 718  ERGHLLDILEMVESNGDFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYI 897
            +   L DI  ++E   + AS       N +P FV NRI+KL  I+D+ +K   +C+ S+I
Sbjct: 283  DWEFLGDIYGLLEVGAEVAS-------NAYPTFVCNRINKLEGIQDETEKRKLSCVFSFI 335

Query: 898  THLLKFMELPSRSRXXXXXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIG 1077
            THL+KF +  S  R               IP +I Q+   MF D   R  S ++  LLI 
Sbjct: 336  THLVKFNDQFSMDRVASAKGHK-------IPSIIRQRFFTMFTDPGLRKPSRDQINLLIS 388

Query: 1078 FILVLTLFADGFRTDPSDIARDLKVPDKSLAPYYLQLGCKF----SQGVMTLPVPLDFP 1242
            ++LVLTL ADGFRTDPSDIA+DL++    L P++  LGCK     +    TLPVPL FP
Sbjct: 389  YVLVLTLHADGFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVRENNSIFTTLPVPLKFP 447


>ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603859 [Solanum tuberosum]
          Length = 431

 Score =  282 bits (721), Expect = 3e-73
 Identities = 176/407 (43%), Positives = 238/407 (58%), Gaps = 18/407 (4%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLS-----EETSPRLRSFRHARFPNRLDLVV--D 246
            V +E + E     +P+VGYFPSGYDP  +     EE S +L  +R+A+  NRL LVV  +
Sbjct: 40   VTMETIAENPNNISPIVGYFPSGYDPLTNNNDGVEELSTKL--YRNAKRNNRLQLVVSPN 97

Query: 247  GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRPGAR 426
            G  V+FVG +Y+GEA +  QLCTY+LG+LDKETQTLKI+PIA NKI+RLEP V       
Sbjct: 98   GSQVDFVGTNYSGEATSA-QLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGLEAQE 156

Query: 427  DEHSEGLEEEVR------KMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIV 588
             E  +  ++E+       KM +LT  Y +KK      K  SL   ++D   +E  D  I 
Sbjct: 157  TEDPDTAKQELTAEERNDKMRELTQKYSSKKTIRQARKLDSL-RQQEDTGNQEEFDRNIA 215

Query: 589  DSEVDKEALEDA-KMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNG 765
             + ++KEALE A    + RNIPPHD  A +P+ AYPLD II K E   LLDI E+ E+  
Sbjct: 216  GA-INKEALEVAVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGA 274

Query: 766  DFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXX 945
            +            +P FV NR +KL +I+D+D+K   A I S+ITHL+KF +  S     
Sbjct: 275  EMTPDL-------YPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVKFKDKHSMD--- 324

Query: 946  XXXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDP 1125
                          P ++ QK   MF  S+S+ L  EK  LLI ++LVLTLFAD FR+DP
Sbjct: 325  ----GVSSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDP 380

Query: 1126 SDIARDLKVPDKSLAPYYLQLGCKFSQG----VMTLPVPLDFPELKK 1254
            SDIA+DL++   +L P+Y  LGCK  +     + TLPVPL FP +++
Sbjct: 381  SDIAKDLRINAVALRPFYEYLGCKLVREKNVVLATLPVPLVFPSVRR 427


>ref|NP_001068274.1| Os11g0615100 [Oryza sativa Japonica Group] gi|77551894|gb|ABA94691.1|
            expressed protein [Oryza sativa Japonica Group]
            gi|113645496|dbj|BAF28637.1| Os11g0615100 [Oryza sativa
            Japonica Group] gi|215697331|dbj|BAG91325.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  282 bits (721), Expect = 3e-73
 Identities = 179/409 (43%), Positives = 234/409 (57%), Gaps = 23/409 (5%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLSE-----ETSPRLRSFRHARFPNRLDLVVD-- 246
            V+  +    A  AAPVV YFP+GYDP  +        +PR R FRH + P+R++LVV   
Sbjct: 91   VDASLTGAAAAGAAPVVAYFPTGYDPLAAGGGRKGREAPRTRLFRHTKHPSRIELVVGAA 150

Query: 247  ---GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTVTDRP 417
               GG  +FVGRSYAGEA   PQL  YALGVLDK + TLK++PIA NK L          
Sbjct: 151  TGGGGGPDFVGRSYAGEAVL-PQLTGYALGVLDKASGTLKVVPIAANKKL---------- 199

Query: 418  GARDEHSEGLEEEVR-------KMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLD 576
             A  +HS  + E V        K+ D+T  +GT+KD+  D KW+SL E R DP+A   LD
Sbjct: 200  -AHSQHSGAVGEAVSSAGDADLKVQDITKAFGTQKDKAKDIKWQSLNEQRNDPSAFMDLD 258

Query: 577  SQIVDSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVE 756
                D+ V      +++  T RNIPP+D  A   E+AY  DEII K+ R HL+DI+   E
Sbjct: 259  LGNADTSV---GANESQEPTVRNIPPYDPAADTSERAYLFDEIIPKSIRPHLVDIIGHFE 315

Query: 757  SNGDFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRS 936
            S G+ +S        G+  FV NR++KL+ ++ +D K   A ILSYITHLL  +   S S
Sbjct: 316  S-GEISSK-------GYGSFVSNRVNKLQELQGED-KERLAWILSYITHLLSLLARNS-S 365

Query: 937  RXXXXXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFR 1116
                            IP+ +Y+K++ MF +  S  LS+EK ELLI +ILVLTL+AD FR
Sbjct: 366  MSKRHRKENQATSGPVIPQYVYRKMVLMFTEPGSSALSTEKHELLINYILVLTLYADDFR 425

Query: 1117 TDPSDIARDLKVPDKSLAPYYLQLGCK------FSQGVMTLPVPLDFPE 1245
            +DP DI  DLK+  + + PYY QLGCK      F   VMTLP PL FP+
Sbjct: 426  SDPKDICEDLKMTRQMIKPYYDQLGCKSSSAGAFKSSVMTLPAPLKFPK 474


>ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267531 [Solanum
            lycopersicum]
          Length = 410

 Score =  281 bits (720), Expect = 4e-73
 Identities = 178/407 (43%), Positives = 239/407 (58%), Gaps = 18/407 (4%)
 Frame = +1

Query: 88   VEVEVLTETAEKAAPVVGYFPSGYDPTLS-----EETSPRLRSFRHARFPNRLDLVVD-- 246
            V +E + E     +P+VGYFPSGYDP  +     EE S +L  +R+ R  NRL +VV   
Sbjct: 19   VTMETIAENPNNISPMVGYFPSGYDPLRNTNDGVEELSTKL--YRNVRRNNRLQVVVSPY 76

Query: 247  GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTV--TDRPG 420
            G  V+FVG +Y+GEA +  QLCTY+LG+LDKETQTLKI+PIA NKI+RLEP V  ++ P 
Sbjct: 77   GSQVDFVGTNYSGEATSA-QLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGSEVPD 135

Query: 421  ARDEHSEG----LEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIV 588
            A D  +       EE   KM +LT +Y +KK      K  SL   ++D   +E  D  I 
Sbjct: 136  AEDPDTAKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSL-RQQEDTGNQEEFDRNIA 194

Query: 589  DSEVDKEALE-DAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNG 765
             + ++KEALE      + RNIPPHD  A +P+ AYPLD II K E   LLDI E+ E+  
Sbjct: 195  GA-INKEALEVTVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGA 253

Query: 766  DFASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXX 945
            +            +P FV NR +KL +I+D+D+K   A ILS+ITHL+KF +  S     
Sbjct: 254  EMTPDL-------YPSFVRNRSYKLEHIQDEDEKKRLAGILSFITHLVKFKDKHSMD--- 303

Query: 946  XXXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDP 1125
                          P ++ QK   MF  S+S+ L  EK  LLI ++LVLTLFAD FR+DP
Sbjct: 304  ----GVSSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDP 359

Query: 1126 SDIARDLKVPDKSLAPYYLQLGCKFSQG----VMTLPVPLDFPELKK 1254
            SDIA+DL++   +L P+Y  LGCK  +     + TLPVPL FP +++
Sbjct: 360  SDIAKDLRINAVALRPFYEYLGCKLVREKNIVLATLPVPLVFPGVRR 406


>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
          Length = 447

 Score =  276 bits (707), Expect = 1e-71
 Identities = 167/403 (41%), Positives = 236/403 (58%), Gaps = 18/403 (4%)
 Frame = +1

Query: 91   EVEVLTETAEKAAPVVGYFPSGYDPTLS---EETSPRLRSFRHARFPN----RLDLVVD- 246
            +V+ + E   KA P+VGYFPS Y P +    EE  P++R +R+         R++LVV  
Sbjct: 56   KVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSP 115

Query: 247  -GGNVEFVGRSYAGEAAAGPQLCTYALGVLDKETQTLKIMPIAGNKILRLEPTV-----T 408
               +V++VG SY+GEA A PQ C YA+GVLD+ TQTLKI+PIA NKI RLEP V      
Sbjct: 116  RDSSVDYVGTSYSGEAMA-PQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRGSDVA 174

Query: 409  DRPGARDEHSEGLEEEVRKMADLTSLYGTKKDRTTDSKWRSLIEHRKDPTAREPLDSQIV 588
            D+   + E S  ++  ++ M D  + YGTKK      K  +L     DP +++ L  ++ 
Sbjct: 175  DKDAGKGEISAEVQANMKAMLD--TRYGTKKSLRQSKKMHAL-NKENDPESQKDLALKMK 231

Query: 589  DSEVDKEALEDAKMGTPRNIPPHDTTAVVPEKAYPLDEIILKAERGHLLDILEMVESNGD 768
              +++KEALE     T  N+PP+D  A  P++AYPLD+IILK E   + DI   V +  +
Sbjct: 232  SVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSE 291

Query: 769  FASSTKFWQDNGFPMFVYNRIHKLRNIKDDDDKTTFACILSYITHLLKFMELPSRSRXXX 948
              S       + +P FV NRIHKLR I+DD +K T A I SYITHL+KF +  S      
Sbjct: 292  VIS-------DAYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMD---- 340

Query: 949  XXXXXXXXXXXXIPRVIYQKLMRMFVDSESRTLSSEKRELLIGFILVLTLFADGFRTDPS 1128
                        IP++++QK +  F D+ES+ LS +K  LLI ++LVLTL AD FRT+P+
Sbjct: 341  ---GGASAKQHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPT 397

Query: 1129 DIARDLKVPDKSLAPYYLQLGCKF----SQGVMTLPVPLDFPE 1245
            DIA+DL++ +  L  ++ +LGCK     +    TLPVPL FP+
Sbjct: 398  DIAKDLRMSEFKLRDHFEKLGCKLLREKNMLYATLPVPLQFPK 440