BLASTX nr result
ID: Stemona21_contig00001613
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00001613
(1314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group] g... 394 e-107
ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea ma... 392 e-106
ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [S... 392 e-106
ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citr... 390 e-106
emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group] 390 e-106
ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation spec... 390 e-106
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec... 390 e-106
gb|ACG33128.1| cleavage and polyadenylation specificity factor 5... 390 e-106
gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kD... 389 e-105
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec... 389 e-105
ref|XP_006653045.1| PREDICTED: cleavage and polyadenylation spec... 389 e-105
gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus pe... 389 e-105
ref|NP_001148753.1| LOC100282369 [Zea mays] gi|195621890|gb|ACG3... 389 e-105
emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group] 389 e-105
ref|XP_006827703.1| hypothetical protein AMTR_s00009p00259100 [A... 387 e-105
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p... 387 e-105
ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation spec... 387 e-105
gb|ADT92189.1| cleavage and polyadenylation specificity factor 5... 385 e-104
ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation spec... 385 e-104
ref|XP_004234388.1| PREDICTED: cleavage and polyadenylation spec... 385 e-104
>ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group]
gi|113565872|dbj|BAF16215.1| Os04g0683100, partial
[Oryza sativa Japonica Group]
Length = 259
Score = 394 bits (1012), Expect = e-107
Identities = 191/210 (90%), Positives = 200/210 (95%), Gaps = 3/210 (1%)
Frame = +2
Query: 233 ARKEG-GEMVSS--PVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSV 403
AR EG G+MVSS PVVN+YPL++YTFG KEPKMEKDTSVADR ARMKVNYMKEGMRTSV
Sbjct: 50 ARGEGEGKMVSSSSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSV 109
Query: 404 EAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNW 583
EAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNW
Sbjct: 110 EAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNW 169
Query: 584 QVGECVAVWWRPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLF 763
QVGECVAVWWRPNFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLF
Sbjct: 170 QVGECVAVWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLF 229
Query: 764 ELYDNVQRYGPVISTIPQQLSRFQFNMVNS 853
ELYDNVQRYGPVISTIPQQLSRFQFNMV+S
Sbjct: 230 ELYDNVQRYGPVISTIPQQLSRFQFNMVSS 259
>ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea mays]
gi|514741959|ref|XP_004960022.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Setaria italica] gi|194705542|gb|ACF86855.1| unknown
[Zea mays] gi|218195850|gb|EEC78277.1| hypothetical
protein OsI_17973 [Oryza sativa Indica Group]
gi|222629797|gb|EEE61929.1| hypothetical protein
OsJ_16671 [Oryza sativa Japonica Group]
gi|223944619|gb|ACN26393.1| unknown [Zea mays]
gi|414584722|tpg|DAA35293.1| TPA: cleavage and
polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 392 bits (1007), Expect = e-106
Identities = 185/198 (93%), Positives = 193/198 (97%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SSPVVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 800 ISTIPQQLSRFQFNMVNS 853
ISTIPQQLSRFQFNMV+S
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
gi|241939980|gb|EES13125.1| hypothetical protein
SORBIDRAFT_06g033360 [Sorghum bicolor]
Length = 202
Score = 392 bits (1006), Expect = e-106
Identities = 184/198 (92%), Positives = 193/198 (97%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SSPVVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQ+GECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQIGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 800 ISTIPQQLSRFQFNMVNS 853
ISTIPQQLSRFQFNMV+S
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citrus clementina]
gi|568874546|ref|XP_006490376.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Citrus sinensis] gi|557523777|gb|ESR35144.1|
hypothetical protein CICLE_v10005929mg [Citrus
clementina]
Length = 200
Score = 390 bits (1003), Expect = e-106
Identities = 185/200 (92%), Positives = 193/200 (96%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+SPVVN YPLSSYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKL ANSP+ P+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL+LVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM+ +
Sbjct: 181 PVISTIPQQLSRFQFNMITA 200
>emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]
Length = 202
Score = 390 bits (1003), Expect = e-106
Identities = 184/198 (92%), Positives = 192/198 (96%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SSPVVN+YPL++YTFG KEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 800 ISTIPQQLSRFQFNMVNS 853
ISTIPQQLSRFQFNMV+S
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X1 [Solanum tuberosum]
gi|565373499|ref|XP_006353310.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X2 [Solanum tuberosum]
gi|565373501|ref|XP_006353311.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X3 [Solanum tuberosum]
gi|565373503|ref|XP_006353312.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X4 [Solanum tuberosum]
Length = 200
Score = 390 bits (1002), Expect = e-106
Identities = 185/200 (92%), Positives = 193/200 (96%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+S VVN YPLSSYTFG KEPKMEKDTSVADRLARMKVNY KEGMRTSVE ILLVQEHN
Sbjct: 1 MVTSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKLAANSP QPNWQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL++VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM++S
Sbjct: 181 PVISTIPQQLSRFQFNMIHS 200
>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Cucumis sativus]
Length = 200
Score = 390 bits (1001), Expect = e-106
Identities = 183/200 (91%), Positives = 193/200 (96%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+SPVVN YPLSSYTFG KEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKL ANSPS QP+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM+ +
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
>gb|ACG33128.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 390 bits (1001), Expect = e-106
Identities = 184/198 (92%), Positives = 192/198 (96%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SSPVVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHL EREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLFEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 800 ISTIPQQLSRFQFNMVNS 853
ISTIPQQLSRFQFNMV+S
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kDa subunit
[Theobroma cacao]
Length = 200
Score = 389 bits (1000), Expect = e-105
Identities = 184/200 (92%), Positives = 193/200 (96%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+SPVVN YPLSSYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKL ANSP+ P+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL+LVHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM+ +
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Vitis vinifera]
gi|297745235|emb|CBI40315.3| unnamed protein product
[Vitis vinifera]
Length = 200
Score = 389 bits (1000), Expect = e-105
Identities = 185/198 (93%), Positives = 194/198 (97%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+SPVVN YPLSSYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKLAANS + QP+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL++VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMV 847
PVISTIPQQLSRFQFNM+
Sbjct: 181 PVISTIPQQLSRFQFNMM 198
>ref|XP_006653045.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oryza brachyantha]
Length = 202
Score = 389 bits (999), Expect = e-105
Identities = 184/198 (92%), Positives = 192/198 (96%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SS VVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 800 ISTIPQQLSRFQFNMVNS 853
ISTIPQQLSRFQFNMV+S
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus persica]
Length = 200
Score = 389 bits (998), Expect = e-105
Identities = 184/200 (92%), Positives = 193/200 (96%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+S VVN YPLSSYTFG KEPKMEKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKINYMKEGMRTSVEAILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKL ANSP+ P+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL+LVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM++S
Sbjct: 181 PVISTIPQQLSRFQFNMISS 200
>ref|NP_001148753.1| LOC100282369 [Zea mays] gi|195621890|gb|ACG32775.1| cleavage and
polyadenylation specificity factor 5 [Zea mays]
gi|224032173|gb|ACN35162.1| unknown [Zea mays]
gi|413920017|gb|AFW59949.1| cleavage and polyadenylation
specificity factor 5 isoform 1 [Zea mays]
gi|413920018|gb|AFW59950.1| cleavage and polyadenylation
specificity factor 5 isoform 2 [Zea mays]
Length = 202
Score = 389 bits (998), Expect = e-105
Identities = 183/198 (92%), Positives = 192/198 (96%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SS VVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLFELYDN+QRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYGPV 184
Query: 800 ISTIPQQLSRFQFNMVNS 853
ISTIPQQLSRFQFNMV+S
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 389 bits (998), Expect = e-105
Identities = 183/195 (93%), Positives = 190/195 (97%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SSPVVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 800 ISTIPQQLSRFQFNM 844
ISTIPQQLSRFQFNM
Sbjct: 185 ISTIPQQLSRFQFNM 199
>ref|XP_006827703.1| hypothetical protein AMTR_s00009p00259100 [Amborella trichopoda]
gi|548832323|gb|ERM95119.1| hypothetical protein
AMTR_s00009p00259100 [Amborella trichopoda]
Length = 200
Score = 387 bits (995), Expect = e-105
Identities = 183/200 (91%), Positives = 195/200 (97%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+S VVN YPLSSYTFG KEPKMEKDTSVA+RLARM+VNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSSVVNAYPLSSYTFGTKEPKMEKDTSVAERLARMRVNYMKEGMRTSVEAILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKLAAN+ + QP+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANAAALQPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL+LVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM+N+
Sbjct: 181 PVISTIPQQLSRFQFNMINA 200
>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
factor im, 25kD subunit, putative [Ricinus communis]
Length = 200
Score = 387 bits (995), Expect = e-105
Identities = 184/200 (92%), Positives = 192/200 (96%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+S VVN YPLSSYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKL ANSP+ P+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL+LVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM+ +
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
>ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 387 bits (993), Expect = e-105
Identities = 182/198 (91%), Positives = 192/198 (96%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SS VVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 6 SSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 65
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEI+GLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 66 HILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 125
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHL+EREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 126 NFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 185
Query: 800 ISTIPQQLSRFQFNMVNS 853
ISTIPQQLSRFQFNMV+S
Sbjct: 186 ISTIPQQLSRFQFNMVSS 203
>gb|ADT92189.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 223
Score = 385 bits (990), Expect = e-104
Identities = 181/197 (91%), Positives = 190/197 (96%)
Frame = +2
Query: 260 SSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 439
SS VVN+YPL++YTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 440 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWWRP 619
HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKLA NSPS PNWQVGECVAVWWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 620 NFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 799
NFET+MYPYCPPHITKPKECKKL++VHLSEREYFAVP+NLKLLAVPLFELYDN+QRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYGPV 184
Query: 800 ISTIPQQLSRFQFNMVN 850
ISTIPQQLSRFQFNM +
Sbjct: 185 ISTIPQQLSRFQFNMAH 201
>ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Fragaria vesca subsp. vesca]
Length = 200
Score = 385 bits (988), Expect = e-104
Identities = 183/200 (91%), Positives = 192/200 (96%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV+S +VN YPLSSYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSAMVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL SKL ANS + P+WQ+GECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSANLVPDWQIGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL+LVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVNS 853
PVISTIPQQLSRFQFNM++S
Sbjct: 181 PVISTIPQQLSRFQFNMISS 200
>ref|XP_004234388.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Solanum lycopersicum]
Length = 200
Score = 385 bits (988), Expect = e-104
Identities = 183/199 (91%), Positives = 191/199 (95%)
Frame = +2
Query: 254 MVSSPVVNIYPLSSYTFGMKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 433
MV++ VVN YPLSSYTFG KE KMEKDTSVADRLARMKVNY KEGMRTSVE ILLVQEHN
Sbjct: 1 MVTTSVVNTYPLSSYTFGTKETKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHN 60
Query: 434 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLASKLAANSPSHQPNWQVGECVAVWW 613
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKLAANSP QPNWQVGECVA+WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQVGECVAIWW 120
Query: 614 RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 793
RPNFETIMYPYCPPHITKPKECKKL++VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 794 PVISTIPQQLSRFQFNMVN 850
PVISTIPQQLSRFQFNM++
Sbjct: 181 PVISTIPQQLSRFQFNMIH 199