BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00001313
         (1919 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...   857   0.0  
ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...   854   0.0  
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   852   0.0  
ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplast...   851   0.0  
gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]                 851   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...   849   0.0  
ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplast...   848   0.0  
ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplast...   832   0.0  
ref|XP_006347707.1| PREDICTED: DNA gyrase subunit A, chloroplast...   832   0.0  
ref|XP_006347706.1| PREDICTED: DNA gyrase subunit A, chloroplast...   832   0.0  
gb|AAG51377.1|AC011560_9 putative DNA gyrase subunit A; 1114-760...   830   0.0  
ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana] gi|...   830   0.0  
gb|AAF19580.1|AC011708_23 putative DNA gyrase A subunit [Arabido...   830   0.0  
ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplast...   830   0.0  
ref|XP_002463658.1| hypothetical protein SORBIDRAFT_01g003750 [S...   830   0.0  
ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplast...   830   0.0  
ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Caps...   829   0.0  
ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplast...   827   0.0  
gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]        827   0.0  
ref|XP_002884807.1| DNA gyrase subunit A family protein [Arabido...   826   0.0  

>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score =  857 bits (2214), Expect = 0.0
 Identities = 442/600 (73%), Positives = 506/600 (84%), Gaps = 3/600 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIP-VRRELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            MA S+ LR++Y  L R++   PL+S         LSELRFLST               + 
Sbjct: 1    MASSSGLRISY--LLRHQLAPPLVSNRFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRR 58

Query: 1614 EG--RPEEDSGERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDV 1441
            +   + E D G+ GNG V V+    G  GRIV T LHKEAT+AYMAYAMSVL+GRALPDV
Sbjct: 59   DEPVKDEGDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDV 118

Query: 1440 RDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFS 1261
            RDGLKPVHRRILFA+HELG+SSR+PF+KCARVVGEVLGKFHPHGD+AVY+SLVRMAQDFS
Sbjct: 119  RDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFS 178

Query: 1260 MRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEP 1081
            +R PLI+GHGNFGSIDADPPAAMRYTECRLEAL+EAMLL+DL++NTVDFVPNFDNSQKEP
Sbjct: 179  LRSPLIQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEP 238

Query: 1080 SLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPD 901
            SLLPAR+PTLLLNGSSGIAVGMATNIPPHNLGE+VDAL VLIHNPEATLQELLEYMPGPD
Sbjct: 239  SLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPD 298

Query: 900  FPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVE 721
            FPTGGLIMGN GILEAYRTGRGRI VRGK +VE LD KTKRTA+IIKEIPYQTNK+ LVE
Sbjct: 299  FPTGGLIMGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVE 358

Query: 720  KIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMV 541
            +IAELVENK L+GISDIRDES ++ MRIVIELKR +DP+I+ NNL+R T+LQSSFSCNMV
Sbjct: 359  RIAELVENKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMV 418

Query: 540  GILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQ 361
            GI+NGQPKLMGLKELLQAFLDFRCSV+ERRAR+KL  AQER+HIVEGI++GLDNLD +I+
Sbjct: 419  GIINGQPKLMGLKELLQAFLDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIR 478

Query: 360  LIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXX 181
            LIR +SS+++A+ +L  ++ LSEKQAEA+LDI+LR+LT LERKKF+DE  SL E I    
Sbjct: 479  LIREASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISKLE 538

Query: 180  XXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                    I QLIEQEA ELK+KF  PRRS+LED++ GQ+EDIDVIPNEEMLLAFSEKGY
Sbjct: 539  ELLSSRNNILQLIEQEATELKDKFPNPRRSVLEDTDSGQVEDIDVIPNEEMLLAFSEKGY 598


>ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
            chloroplastic/mitochondrial-like, partial [Cucumis
            sativus]
          Length = 799

 Score =  854 bits (2207), Expect = 0.0
 Identities = 441/600 (73%), Positives = 505/600 (84%), Gaps = 3/600 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIP-VRRELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            MA S+ LR++Y  L R++   PL+S         LSELRFLST               + 
Sbjct: 1    MASSSGLRISY--LLRHQLAPPLVSNRFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRR 58

Query: 1614 EG--RPEEDSGERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDV 1441
            +   + E D G+ GNG V V+    G  GRIV T LHKEAT+AYMAYAMSVL+GRALPDV
Sbjct: 59   DEPVKDEGDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDV 118

Query: 1440 RDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFS 1261
            RDGLKPVHRRILFA+HELG+SSR+PF+KCARVVGEVLGKFHPHGD+AVY+SLVRMAQDFS
Sbjct: 119  RDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFS 178

Query: 1260 MRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEP 1081
            +R PLI+GH NFGSIDADPPAAMRYTECRLEAL+EAMLL+DL++NTVDFVPNFDNSQKEP
Sbjct: 179  LRSPLIQGHXNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEP 238

Query: 1080 SLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPD 901
            SLLPAR+PTLLLNGSSGIAVGMATNIPPHNLGE+VDAL VLIHNPEATLQELLEYMPGPD
Sbjct: 239  SLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPD 298

Query: 900  FPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVE 721
            FPTGGLIMGN GILEAYRTGRGRI VRGK +VE LD KTKRTA+IIKEIPYQTNK+ LVE
Sbjct: 299  FPTGGLIMGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVE 358

Query: 720  KIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMV 541
            +IAELVENK L+GISDIRDES ++ MRIVIELKR +DP+I+ NNL+R T+LQSSFSCNMV
Sbjct: 359  RIAELVENKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMV 418

Query: 540  GILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQ 361
            GI+NGQPKLMGLKELLQAFLDFRCSV+ERRAR+KL  AQER+HIVEGI++GLDNLD +I+
Sbjct: 419  GIINGQPKLMGLKELLQAFLDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIR 478

Query: 360  LIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXX 181
            LIR +SS+++A+ +L  ++ LSEKQAEA+LDI+LR+LT LERKKF+DE  SL E I    
Sbjct: 479  LIREASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISKLE 538

Query: 180  XXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                    I QLIEQEA ELK+KF  PRRS+LED++ GQ+EDIDVIPNEEMLLAFSEKGY
Sbjct: 539  ELLSSRNNILQLIEQEATELKDKFPNPRRSVLEDTDSGQVEDIDVIPNEEMLLAFSEKGY 598


>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score =  852 bits (2202), Expect = 0.0
 Identities = 438/586 (74%), Positives = 494/586 (84%)
 Frame = -3

Query: 1758 SSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXRDKDEGRPEEDSGERG 1579
            SSL R++F +PL          LS LRFLS                    R      E G
Sbjct: 21   SSLLRHQFSLPL-------HHRLSYLRFLSVTAPPRKPHLV---------RARRRDDEEG 64

Query: 1578 NGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDVRDGLKPVHRRILFA 1399
            NG ++++ K  G  GRIVPTELHKEATEAYMAYAMSVL+GRALPDVRDGLKPVHRRILFA
Sbjct: 65   NGSLVLKEKD-GRDGRIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFA 123

Query: 1398 LHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMRYPLIRGHGNFGS 1219
            +HELG+SSR+P++KCARVVGEVLGKFHPHGD+AVY+SLVRMAQDFS+R PLI+GHGNFGS
Sbjct: 124  MHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGS 183

Query: 1218 IDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSLLPARIPTLLLNG 1039
            +DADPPAAMRYTECRLEALTEAMLL DL+ +TVDF+PNFDNSQKEPSLLPAR+PTLLLNG
Sbjct: 184  VDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPSLLPARLPTLLLNG 243

Query: 1038 SSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFPTGGLIMGNVGIL 859
            SSGIAVGMATNIPPHN+GELVD L VLI NPEATLQELLEYMPGPDFPTGGLIMGN+GIL
Sbjct: 244  SSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDFPTGGLIMGNIGIL 303

Query: 858  EAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKIAELVENKVLEGI 679
            EAYRTGRGRIIVRGK +VE LD KTKRTA+IIKEIPYQTNK++LVEKIAELVENK L+GI
Sbjct: 304  EAYRTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSSLVEKIAELVENKSLDGI 363

Query: 678  SDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGILNGQPKLMGLKE 499
            SDIRDES +S MRIVIELKR SDP+I+LN L+R TALQSSFSCNM+GIL+GQPKLMGLKE
Sbjct: 364  SDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKLMGLKE 423

Query: 498  LLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLIRGSSSNTMATGA 319
            LLQAFLDFRCSV+ERRAR+KLSQAQER+HIVEGI+VGLDNLD +I++I+ + SN MA+  
Sbjct: 424  LLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNAMASTG 483

Query: 318  LMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXXXXXXXLIFQLIE 139
            L  E+ LSE+QAEA+LDISLR++T LER+KFV E  SL EQI            I QLIE
Sbjct: 484  LRNEFGLSERQAEAILDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQILQLIE 543

Query: 138  QEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
            QEA ELKN+F TPRRS+LED++ GQLED+DVIPNEEMLLA SEKGY
Sbjct: 544  QEAIELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLLAVSEKGY 589


>ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X3 [Solanum tuberosum]
          Length = 957

 Score =  851 bits (2199), Expect = 0.0
 Identities = 441/604 (73%), Positives = 501/604 (82%), Gaps = 7/604 (1%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXRDKDE 1612
            MA ST +RL       + F   + S    +RR  SELRFLS+             R K  
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTA-IPSRFSGLRRASSELRFLSSVTPPRKQVRPVSARRKVT 76

Query: 1611 GRPEEDSGERGNGGVLVEPKSSGPGG-------RIVPTELHKEATEAYMAYAMSVLIGRA 1453
               EE+ G+ GNG V++  +    GG       RIV TELHKEATEAYM+YAMSVL+GRA
Sbjct: 77   ---EEEVGDEGNGSVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLGRA 133

Query: 1452 LPDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMA 1273
            LPDVRDGLKPVHRRIL+A+HELG+SS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMA
Sbjct: 134  LPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVRMA 193

Query: 1272 QDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNS 1093
            QDFS+R PLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLL DL+ NTVDFVPNFDNS
Sbjct: 194  QDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNS 253

Query: 1092 QKEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYM 913
            QKEPSLLPARIP LLLNG+SGIAVGMATNIPPHNLGELVDAL+ LIHNPEATLQELLEYM
Sbjct: 254  QKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 313

Query: 912  PGPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKA 733
            PGPDFPTGG+IMGN+GILEAYRTGRGR+++RGK D+E LD KTKR AIII+EIPYQTNKA
Sbjct: 314  PGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKA 373

Query: 732  TLVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFS 553
            +LVEKIA+LVENK LEG+SDIRDES +S MR+VIELKR SDP I+LNNL+R TALQSSFS
Sbjct: 374  SLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSSFS 433

Query: 552  CNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLD 373
            CNMVGILNGQPKLMGLKELLQAFLDFRCSV+ERRA+YKLSQAQER HIVEGII+GLDNLD
Sbjct: 434  CNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVEGIIIGLDNLD 493

Query: 372  NIIQLIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQI 193
             +I+ IR +SS+ +AT  L +E++L+EKQAEA+LDISLR+LT+LER KFVDE  SL  QI
Sbjct: 494  EVIKTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRAQI 553

Query: 192  XXXXXXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFS 13
                        I QLIE+EA E+K+K+ TPRRS LED++ G LEDIDVIPNEEMLLA S
Sbjct: 554  SKLEELLSSKKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLAIS 613

Query: 12   EKGY 1
            EKGY
Sbjct: 614  EKGY 617


>gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score =  851 bits (2198), Expect = 0.0
 Identities = 439/598 (73%), Positives = 499/598 (83%), Gaps = 1/598 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXRDKDE 1612
            M+LS  LR ++     Y  P    S    +R  LS LRFLS                +  
Sbjct: 1    MSLSYTLRFSFLRHNLYLAP----SGVSALRPNLSHLRFLSVTPTRPLLSPVKAR--RAG 54

Query: 1611 GRPEEDSGERGNGGVLVEPKSSGPG-GRIVPTELHKEATEAYMAYAMSVLIGRALPDVRD 1435
            G+ +ED    G+   +V   S G G GR+VPTELHKEATE+YMAYA+SVL+GRALPDVRD
Sbjct: 55   GQEDEDGAGNGSLTAIVNDGSGGGGDGRVVPTELHKEATESYMAYALSVLLGRALPDVRD 114

Query: 1434 GLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMR 1255
            GLKPVHRRILFA+HELG+SSR+PF+KCARVVGEVLGKFHPHGD+AVY+SLVRMAQDFS+R
Sbjct: 115  GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 174

Query: 1254 YPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSL 1075
            +PLI+GHGNFGSIDADPPAAMRYTECRLEALTEA+LL DL+ +TVDFVPNFDNS KEPSL
Sbjct: 175  FPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAILLADLEQDTVDFVPNFDNSHKEPSL 234

Query: 1074 LPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFP 895
            LPAR+PTLLLNG+SGIAVGMATNIPPHNLGELVD L  LI NPEA+LQELLEYMPGPDFP
Sbjct: 235  LPARLPTLLLNGTSGIAVGMATNIPPHNLGELVDVLCALIQNPEASLQELLEYMPGPDFP 294

Query: 894  TGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKI 715
            TGGLIMGN+GILEAYRTGRGRI+VRGKAD+E LD KTKR+A+IIKEIPYQTNK++LVEKI
Sbjct: 295  TGGLIMGNLGILEAYRTGRGRIVVRGKADIELLDSKTKRSAVIIKEIPYQTNKSSLVEKI 354

Query: 714  AELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGI 535
            AELVENK LEGISDIRDES +S MR+VIELKR SDP+I+LNNL+R TALQSSFSCNMVGI
Sbjct: 355  AELVENKSLEGISDIRDESDRSGMRVVIELKRGSDPSIVLNNLYRLTALQSSFSCNMVGI 414

Query: 534  LNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLI 355
            L+GQPK MGLKELLQ+FLDFRCSV+ERRARYKLSQAQ+R+HIVEGI+VGLDNLD++I +I
Sbjct: 415  LDGQPKQMGLKELLQSFLDFRCSVVERRARYKLSQAQDRRHIVEGIVVGLDNLDSVIDII 474

Query: 354  RGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXX 175
            R +SSN  A+  L  E+ LS+KQAEA+LDI+LR+L  LERKKFV E  SL EQI      
Sbjct: 475  REASSNAAASAGLRNEFNLSDKQAEAILDINLRRLNLLERKKFVGESRSLMEQISKLTEL 534

Query: 174  XXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                  I QLIEQEA ELK+KF +PRRS+LEDS+ GQLEDIDVIPNEEMLLAFSEKGY
Sbjct: 535  LSSRKNILQLIEQEAIELKSKFSSPRRSILEDSDGGQLEDIDVIPNEEMLLAFSEKGY 592


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score =  849 bits (2194), Expect = 0.0
 Identities = 430/572 (75%), Positives = 489/572 (85%), Gaps = 4/572 (0%)
 Frame = -3

Query: 1704 VRRELSELRFLSTXXXXXXXXXXXXXRDKDEGRPEEDSGERGNGGVLV----EPKSSGPG 1537
            +R+  SELRFLS+                   R EE+ G+ GNG V++    E +    G
Sbjct: 32   LRKTSSELRFLSSVTPPPRKQLRPV----SARRKEEEVGDEGNGSVILRDRGENEDRNGG 87

Query: 1536 GRIVPTELHKEATEAYMAYAMSVLIGRALPDVRDGLKPVHRRILFALHELGMSSRRPFRK 1357
             R+V TELHKEATEAYM+YAMSVL+GRALPDVRDGLKPVHRRIL+A+HELG+SS++P++K
Sbjct: 88   ERVVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKK 147

Query: 1356 CARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTEC 1177
            CARVVGEVLGKFHPHGD+AVY+SLVRMAQDFS+R PLIRGHGNFGSIDADPPAAMRYTEC
Sbjct: 148  CARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTEC 207

Query: 1176 RLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMATNIPP 997
            RLEALTE+MLL DL+ NTVDFVPNFDNSQKEPSLLPAR+P LLLNG+SGIAVGMATNIPP
Sbjct: 208  RLEALTESMLLADLEQNTVDFVPNFDNSQKEPSLLPARVPNLLLNGASGIAVGMATNIPP 267

Query: 996  HNLGELVDALAVLIHNPEATLQELLEYMPGPDFPTGGLIMGNVGILEAYRTGRGRIIVRG 817
            HNLGELVDAL+ LIHNPEATLQELLEYMPGPDFPTGG+IMGN+GILEA+RTGRGR+++RG
Sbjct: 268  HNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMGNIGILEAFRTGRGRVVIRG 327

Query: 816  KADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKIAELVENKVLEGISDIRDESAKSEMRI 637
            K D+E LD KTKR AIII+EIPYQTNKA+LVEKIA+LVENK+LEG+SDIRDES +S MRI
Sbjct: 328  KTDIELLDSKTKRAAIIIQEIPYQTNKASLVEKIADLVENKILEGVSDIRDESDRSGMRI 387

Query: 636  VIELKRASDPNIILNNLFRHTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIE 457
            VIELKR SDP I+LNNL+R TALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSV+E
Sbjct: 388  VIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVE 447

Query: 456  RRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLIRGSSSNTMATGALMREYKLSEKQAEA 277
            RRAR+KLSQAQER HIVEGIIVGLDNLD +I  IR +SSN +A  +L +E++LSEKQAEA
Sbjct: 448  RRARFKLSQAQERNHIVEGIIVGLDNLDEVINTIRKASSNALAAASLRKEFELSEKQAEA 507

Query: 276  LLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXXXXXXXLIFQLIEQEAFELKNKFGTPR 97
            +LDISLR+LT+LER KFV+E  SL  QI            I QLIE+EA E+KNKF  PR
Sbjct: 508  ILDISLRRLTALERNKFVEEGKSLRTQISKLEELLSSKKQILQLIEEEAIEIKNKFFNPR 567

Query: 96   RSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
            RS+LED++ G LEDIDVIPNEEMLLA SEKGY
Sbjct: 568  RSMLEDTDSGDLEDIDVIPNEEMLLAISEKGY 599


>ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Solanum lycopersicum]
          Length = 953

 Score =  848 bits (2190), Expect = 0.0
 Identities = 440/603 (72%), Positives = 501/603 (83%), Gaps = 3/603 (0%)
 Frame = -3

Query: 1800 SLAMALSTMLRLTYSSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXRD 1621
            S +MA ST +RL      ++ F   + S    +R+  SELRFLS+             R 
Sbjct: 15   SNSMAFSTGIRLLRCYHHQFTFTA-IPSRFSGLRKASSELRFLSSVTPSRKHVRPVSARR 73

Query: 1620 KDEGRPEEDSGERGNGGVLVEPKSSGPGG---RIVPTELHKEATEAYMAYAMSVLIGRAL 1450
            K     EE+ GE GNG V++  +    GG   RIV TELHKEATEAYM+YAMSVL+GRAL
Sbjct: 74   KVT---EEEVGEEGNGSVVLRDRDGNEGGGGERIVHTELHKEATEAYMSYAMSVLLGRAL 130

Query: 1449 PDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQ 1270
            PDVRDGLKPVHRRIL+A+HELG+SS++P++K ARVVGEVLGKFHPHGD+AVY+SLVRMAQ
Sbjct: 131  PDVRDGLKPVHRRILYAMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNAVYDSLVRMAQ 190

Query: 1269 DFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQ 1090
            DFS+R PLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLL DL+ NTVDFVPNFDNSQ
Sbjct: 191  DFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQ 250

Query: 1089 KEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMP 910
            KEPSLLPARIP LLLNG+SGIAVGMATNIPPHNLGELVDAL+ LIHNPEATLQELLEYMP
Sbjct: 251  KEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMP 310

Query: 909  GPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKAT 730
            GPDFPTGG+IMGN+GILEAYRTGRGR+++RGK D+E LD KTKR AIII+EIPYQTNKA+
Sbjct: 311  GPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKAS 370

Query: 729  LVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSC 550
            LVEKIA+LVENK LEG+SDIRDES +S MR+VIELKR SDP I+LNNL+R T LQSSFSC
Sbjct: 371  LVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTPLQSSFSC 430

Query: 549  NMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDN 370
            NMVGILNGQPKLMGLKELLQAFLDFRCSV+ERRA+YKLSQAQER HIVEGII+GLDNLD 
Sbjct: 431  NMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEGIIIGLDNLDE 490

Query: 369  IIQLIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIX 190
            +I  IR +SS+ +AT  L +E++L+EKQAEA+LDISLR+LT+LER KFVDE  SL  QI 
Sbjct: 491  VINTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRTQIS 550

Query: 189  XXXXXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSE 10
                       I QLIE+EA E+K+K+ TPRRS LED++ G LEDIDVIPNEEMLLA SE
Sbjct: 551  KLEELLSSEKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIPNEEMLLAISE 610

Query: 9    KGY 1
            KGY
Sbjct: 611  KGY 613


>ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Cicer arietinum]
          Length = 942

 Score =  832 bits (2149), Expect = 0.0
 Identities = 433/606 (71%), Positives = 494/606 (81%), Gaps = 5/606 (0%)
 Frame = -3

Query: 1803 HSLAMALSTMLRLTYSSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXR 1624
            H+  M+ S+  RL   +L+ +    P ++     RR  SELRFLS               
Sbjct: 10   HNSTMSFSSAFRLL--TLSPFT---PTITRFSFFRRTSSELRFLSASTRRRPSISVKASS 64

Query: 1623 DKDEGRPEEDSGERGNGGVLVEPKSSGPG-----GRIVPTELHKEATEAYMAYAMSVLIG 1459
             + +  PE+D    GNG + V   + G G     GRIV TELHKEATEAYM+YAMSVL+G
Sbjct: 65   GRRD-EPEQDGN--GNGSLAVIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVLLG 121

Query: 1458 RALPDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVR 1279
            RALPDVRDGLKPVHRRILFA+HELG+SS++PF+KCARVVGEVLGKFHPHGDSAVY+S+VR
Sbjct: 122  RALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSMVR 181

Query: 1278 MAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFD 1099
            MAQDFS+R PL+ GHGNFGSIDADPPAAMRYTECRLE L EAMLL DLD +TVDF PNFD
Sbjct: 182  MAQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPNFD 241

Query: 1098 NSQKEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLE 919
            NSQKEPS+LPAR+PTLLLNGSSGIAVGMATNIPPHNLGE+VD L V+IHNPEATLQELLE
Sbjct: 242  NSQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATLQELLE 301

Query: 918  YMPGPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTN 739
            YMPGPDFPTGGLIMGN+GILEAYRTGRGR+IVRGK D+E LD KTKRTAIIIKEIPYQTN
Sbjct: 302  YMPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIPYQTN 361

Query: 738  KATLVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSS 559
            KA LVEKIAELVENK LEGISDIRDES +S MRIVIELKR SDP I+LNNL+R T+LQS+
Sbjct: 362  KAALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQST 421

Query: 558  FSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDN 379
            FSCNMVGILNGQPK MGLKELLQAFLDFRCSV+ERRAR++LS+AQ+R+H+VEGI+VG +N
Sbjct: 422  FSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILVGFNN 481

Query: 378  LDNIIQLIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAE 199
            LD +I++IR +SSNT+A   L  E+ LSEKQAEALLD+SLR+LT  E   FV E  SL E
Sbjct: 482  LDRVIRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENKSLVE 541

Query: 198  QIXXXXXXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLA 19
            QI            I +LIEQEA +LKNKF +PRRS+LED++ GQL+DIDVIPNEEMLLA
Sbjct: 542  QISKLEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIPNEEMLLA 601

Query: 18   FSEKGY 1
             SEKGY
Sbjct: 602  LSEKGY 607


>ref|XP_006347707.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Solanum tuberosum]
          Length = 996

 Score =  832 bits (2148), Expect = 0.0
 Identities = 441/644 (68%), Positives = 501/644 (77%), Gaps = 47/644 (7%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXRDKDE 1612
            MA ST +RL       + F   + S    +RR  SELRFLS+             R K  
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTA-IPSRFSGLRRASSELRFLSSVTPPRKQVRPVSARRKVT 76

Query: 1611 GRPEEDSGERGNGGVLVEPKSSGPGG-------RIVPTELHKEATEAYMAYAMSVLIGRA 1453
               EE+ G+ GNG V++  +    GG       RIV TELHKEATEAYM+YAMSVL+GRA
Sbjct: 77   ---EEEVGDEGNGSVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLGRA 133

Query: 1452 LPDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMA 1273
            LPDVRDGLKPVHRRIL+A+HELG+SS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMA
Sbjct: 134  LPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVRMA 193

Query: 1272 QDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNS 1093
            QDFS+R PLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLL DL+ NTVDFVPNFDNS
Sbjct: 194  QDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNS 253

Query: 1092 QKEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYM 913
            QKEPSLLPARIP LLLNG+SGIAVGMATNIPPHNLGELVDAL+ LIHNPEATLQELLEYM
Sbjct: 254  QKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 313

Query: 912  PGPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKA 733
            PGPDFPTGG+IMGN+GILEAYRTGRGR+++RGK D+E LD KTKR AIII+EIPYQTNKA
Sbjct: 314  PGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKA 373

Query: 732  TLVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFS 553
            +LVEKIA+LVENK LEG+SDIRDES +S MR+VIELKR SDP I+LNNL+R TALQSSFS
Sbjct: 374  SLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSSFS 433

Query: 552  CNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVE---------- 403
            CNMVGILNGQPKLMGLKELLQAFLDFRCSV+ERRA+YKLSQAQER HIVE          
Sbjct: 434  CNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVERPKQVLPTRR 493

Query: 402  ------------------------------GIIVGLDNLDNIIQLIRGSSSNTMATGALM 313
                                          GII+GLDNLD +I+ IR +SS+ +AT  L 
Sbjct: 494  QAYASYQEKSSFPFCNFLLGIIPSSSNHLMGIIIGLDNLDEVIKTIRKASSHALATANLR 553

Query: 312  REYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXXXXXXXLIFQLIEQE 133
            +E++L+EKQAEA+LDISLR+LT+LER KFVDE  SL  QI            I QLIE+E
Sbjct: 554  KEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRAQISKLEELLSSKKQILQLIEEE 613

Query: 132  AFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
            A E+K+K+ TPRRS LED++ G LEDIDVIPNEEMLLA SEKGY
Sbjct: 614  ALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLAISEKGY 657


>ref|XP_006347706.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Solanum tuberosum]
          Length = 997

 Score =  832 bits (2148), Expect = 0.0
 Identities = 441/644 (68%), Positives = 501/644 (77%), Gaps = 47/644 (7%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXRDKDE 1612
            MA ST +RL       + F   + S    +RR  SELRFLS+             R K  
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTA-IPSRFSGLRRASSELRFLSSVTPPRKQVRPVSARRKVT 76

Query: 1611 GRPEEDSGERGNGGVLVEPKSSGPGG-------RIVPTELHKEATEAYMAYAMSVLIGRA 1453
               EE+ G+ GNG V++  +    GG       RIV TELHKEATEAYM+YAMSVL+GRA
Sbjct: 77   ---EEEVGDEGNGSVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLGRA 133

Query: 1452 LPDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMA 1273
            LPDVRDGLKPVHRRIL+A+HELG+SS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMA
Sbjct: 134  LPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVRMA 193

Query: 1272 QDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNS 1093
            QDFS+R PLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLL DL+ NTVDFVPNFDNS
Sbjct: 194  QDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNS 253

Query: 1092 QKEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYM 913
            QKEPSLLPARIP LLLNG+SGIAVGMATNIPPHNLGELVDAL+ LIHNPEATLQELLEYM
Sbjct: 254  QKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 313

Query: 912  PGPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKA 733
            PGPDFPTGG+IMGN+GILEAYRTGRGR+++RGK D+E LD KTKR AIII+EIPYQTNKA
Sbjct: 314  PGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKA 373

Query: 732  TLVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFS 553
            +LVEKIA+LVENK LEG+SDIRDES +S MR+VIELKR SDP I+LNNL+R TALQSSFS
Sbjct: 374  SLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSSFS 433

Query: 552  CNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVE---------- 403
            CNMVGILNGQPKLMGLKELLQAFLDFRCSV+ERRA+YKLSQAQER HIVE          
Sbjct: 434  CNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVERPKQVLPTRR 493

Query: 402  ------------------------------GIIVGLDNLDNIIQLIRGSSSNTMATGALM 313
                                          GII+GLDNLD +I+ IR +SS+ +AT  L 
Sbjct: 494  QAYASYQEKSSFPFCNFLLGIIPSSSNHLMGIIIGLDNLDEVIKTIRKASSHALATANLR 553

Query: 312  REYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXXXXXXXLIFQLIEQE 133
            +E++L+EKQAEA+LDISLR+LT+LER KFVDE  SL  QI            I QLIE+E
Sbjct: 554  KEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRAQISKLEELLSSKKQILQLIEEE 613

Query: 132  AFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
            A E+K+K+ TPRRS LED++ G LEDIDVIPNEEMLLA SEKGY
Sbjct: 614  ALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLAISEKGY 657


>gb|AAG51377.1|AC011560_9 putative DNA gyrase subunit A; 1114-7603 [Arabidopsis thaliana]
          Length = 917

 Score =  830 bits (2145), Expect = 0.0
 Identities = 425/598 (71%), Positives = 499/598 (83%), Gaps = 1/598 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRR-ELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            M+LS+ LRL+ S L R  F  PL      +RR E S  RF S+             +  D
Sbjct: 19   MSLSSTLRLSSSLLRRSFFRFPLTDPLCRLRRTEPSATRFFSSRTPRSGKFVVGAGKRGD 78

Query: 1614 EGRPEEDSGERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDVRD 1435
            E + +E+SG   NGG++V    SG   RIVP ELHKEATE+YM+YA+SVL+GRALPDVRD
Sbjct: 79   E-QVKEESGAN-NGGLVV----SGDESRIVPFELHKEATESYMSYALSVLLGRALPDVRD 132

Query: 1434 GLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMR 1255
            GLKPVHRRILFA+HELGMSS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMAQ FS+R
Sbjct: 133  GLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLR 192

Query: 1254 YPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSL 1075
             PLI+GHGNFGSIDADPPAAMRYTECRL+ L EA+LL+DLD +TVDFV NFDNSQKEP++
Sbjct: 193  CPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAV 252

Query: 1074 LPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFP 895
            LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PDFP
Sbjct: 253  LPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFP 312

Query: 894  TGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKI 715
            TGG+IMGN+G+L+AYRTGRGR++VRGKA+VE LD KTKR A+II EIPYQTNKATLV+KI
Sbjct: 313  TGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKI 372

Query: 714  AELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGI 535
            AELVENK LEGISDIRDES ++ MR+VIELKR  DP ++LNNL+RHTALQSSFSCNMVGI
Sbjct: 373  AELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGI 432

Query: 534  LNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLI 355
             +G+PKLMGLKELLQAF+DFRCSV+ERRAR+KLS AQ+RKHI+EGI+VGLDN+D +I+LI
Sbjct: 433  CDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIELI 492

Query: 354  RGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXX 175
              +SS++ AT AL  EY LSEKQAEA+L+I+LR+LT+LERKKF DE +SL EQI      
Sbjct: 493  TKASSHSSATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITKLEQL 552

Query: 174  XXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                  I +LIEQEA ELK++F +PRRS+LEDS+ G LEDIDVIPNEEML+A SEKGY
Sbjct: 553  LSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAVSEKGY 610


>ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana]
            gi|110808536|sp|Q9CAF6.2|GYRA_ARATH RecName:
            Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
            gi|332641422|gb|AEE74943.1| DNA gyrase subunit A
            [Arabidopsis thaliana]
          Length = 950

 Score =  830 bits (2145), Expect = 0.0
 Identities = 425/598 (71%), Positives = 499/598 (83%), Gaps = 1/598 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRR-ELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            M+LS+ LRL+ S L R  F  PL      +RR E S  RF S+             +  D
Sbjct: 19   MSLSSTLRLSSSLLRRSFFRFPLTDPLCRLRRTEPSATRFFSSRTPRSGKFVVGAGKRGD 78

Query: 1614 EGRPEEDSGERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDVRD 1435
            E + +E+SG   NGG++V    SG   RIVP ELHKEATE+YM+YA+SVL+GRALPDVRD
Sbjct: 79   E-QVKEESGAN-NGGLVV----SGDESRIVPFELHKEATESYMSYALSVLLGRALPDVRD 132

Query: 1434 GLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMR 1255
            GLKPVHRRILFA+HELGMSS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMAQ FS+R
Sbjct: 133  GLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLR 192

Query: 1254 YPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSL 1075
             PLI+GHGNFGSIDADPPAAMRYTECRL+ L EA+LL+DLD +TVDFV NFDNSQKEP++
Sbjct: 193  CPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAV 252

Query: 1074 LPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFP 895
            LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PDFP
Sbjct: 253  LPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFP 312

Query: 894  TGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKI 715
            TGG+IMGN+G+L+AYRTGRGR++VRGKA+VE LD KTKR A+II EIPYQTNKATLV+KI
Sbjct: 313  TGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKI 372

Query: 714  AELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGI 535
            AELVENK LEGISDIRDES ++ MR+VIELKR  DP ++LNNL+RHTALQSSFSCNMVGI
Sbjct: 373  AELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGI 432

Query: 534  LNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLI 355
             +G+PKLMGLKELLQAF+DFRCSV+ERRAR+KLS AQ+RKHI+EGI+VGLDN+D +I+LI
Sbjct: 433  CDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIELI 492

Query: 354  RGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXX 175
              +SS++ AT AL  EY LSEKQAEA+L+I+LR+LT+LERKKF DE +SL EQI      
Sbjct: 493  TKASSHSSATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITKLEQL 552

Query: 174  XXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                  I +LIEQEA ELK++F +PRRS+LEDS+ G LEDIDVIPNEEML+A SEKGY
Sbjct: 553  LSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAVSEKGY 610


>gb|AAF19580.1|AC011708_23 putative DNA gyrase A subunit [Arabidopsis thaliana]
          Length = 899

 Score =  830 bits (2145), Expect = 0.0
 Identities = 425/598 (71%), Positives = 499/598 (83%), Gaps = 1/598 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRR-ELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            M+LS+ LRL+ S L R  F  PL      +RR E S  RF S+             +  D
Sbjct: 1    MSLSSTLRLSSSLLRRSFFRFPLTDPLCRLRRTEPSATRFFSSRTPRSGKFVVGAGKRGD 60

Query: 1614 EGRPEEDSGERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDVRD 1435
            E + +E+SG   NGG++V    SG   RIVP ELHKEATE+YM+YA+SVL+GRALPDVRD
Sbjct: 61   E-QVKEESGAN-NGGLVV----SGDESRIVPFELHKEATESYMSYALSVLLGRALPDVRD 114

Query: 1434 GLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMR 1255
            GLKPVHRRILFA+HELGMSS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMAQ FS+R
Sbjct: 115  GLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLR 174

Query: 1254 YPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSL 1075
             PLI+GHGNFGSIDADPPAAMRYTECRL+ L EA+LL+DLD +TVDFV NFDNSQKEP++
Sbjct: 175  CPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAV 234

Query: 1074 LPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFP 895
            LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PDFP
Sbjct: 235  LPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFP 294

Query: 894  TGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKI 715
            TGG+IMGN+G+L+AYRTGRGR++VRGKA+VE LD KTKR A+II EIPYQTNKATLV+KI
Sbjct: 295  TGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKI 354

Query: 714  AELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGI 535
            AELVENK LEGISDIRDES ++ MR+VIELKR  DP ++LNNL+RHTALQSSFSCNMVGI
Sbjct: 355  AELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGI 414

Query: 534  LNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLI 355
             +G+PKLMGLKELLQAF+DFRCSV+ERRAR+KLS AQ+RKHI+EGI+VGLDN+D +I+LI
Sbjct: 415  CDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIELI 474

Query: 354  RGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXX 175
              +SS++ AT AL  EY LSEKQAEA+L+I+LR+LT+LERKKF DE +SL EQI      
Sbjct: 475  TKASSHSSATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITKLEQL 534

Query: 174  XXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                  I +LIEQEA ELK++F +PRRS+LEDS+ G LEDIDVIPNEEML+A SEKGY
Sbjct: 535  LSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAVSEKGY 592


>ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 939

 Score =  830 bits (2144), Expect = 0.0
 Identities = 431/606 (71%), Positives = 494/606 (81%), Gaps = 9/606 (1%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIP-VRRELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            MAL++ LRL+ S+  R R P PL       +R  L +LRFLS                  
Sbjct: 1    MALASGLRLS-STFLRCRLPAPLNPTRFSALRHSLFDLRFLSASSSSRTRTRTRLRPRPI 59

Query: 1614 EGRPEEDSG--------ERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIG 1459
            +  P ED G        + GNG VLV+        RIV  ELHKEAT+AYMAYAMSVL+G
Sbjct: 60   KATPSEDGGLLEGAGEGQNGNGSVLVKDSDE----RIVRVELHKEATDAYMAYAMSVLLG 115

Query: 1458 RALPDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVR 1279
            RALPD+RDGLKPVHRRIL+A+HEL +SSR+PF KCARVVGEVLGKFHPHGD+AVY+SLVR
Sbjct: 116  RALPDIRDGLKPVHRRILYAMHELRLSSRKPFVKCARVVGEVLGKFHPHGDTAVYDSLVR 175

Query: 1278 MAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFD 1099
            MAQDFS+R PLI GHGNFGSIDADP AAMRYTECRLEALTEAMLL+DL+ +TVDFVPNFD
Sbjct: 176  MAQDFSLRSPLINGHGNFGSIDADPAAAMRYTECRLEALTEAMLLSDLEQDTVDFVPNFD 235

Query: 1098 NSQKEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLE 919
            NSQKEPSLLPAR+P LLLNGSSGIAVGMATNIPPHNLGELVD L+VLIHNPEATLQELLE
Sbjct: 236  NSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDVLSVLIHNPEATLQELLE 295

Query: 918  YMPGPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTN 739
            YMPGPDFPTGGLIMGN+GILEAYRTGRGRI+VRGK D+E LD K KR+AIIIKEIPYQTN
Sbjct: 296  YMPGPDFPTGGLIMGNLGILEAYRTGRGRIVVRGKTDIESLDSKGKRSAIIIKEIPYQTN 355

Query: 738  KATLVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSS 559
            KA LVEKIA+LVENK+L+GISDIRDES ++ MR+VIELKR SDP+I+LNNL+R T+LQSS
Sbjct: 356  KAALVEKIAQLVENKILDGISDIRDESDRTGMRVVIELKRGSDPSIVLNNLYRLTSLQSS 415

Query: 558  FSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDN 379
            FSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRA++KLSQAQ+R+HIVEGI VGLDN
Sbjct: 416  FSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRAKFKLSQAQDRRHIVEGIAVGLDN 475

Query: 378  LDNIIQLIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAE 199
            L  ++++   +S+NT+A+  L  E+ LSEKQAEA+LD + R+L  LERKKF +E  SL E
Sbjct: 476  LQRVMRISLEASNNTIASSLLRNEFNLSEKQAEAILDFNFRRLNVLERKKFDNESESLKE 535

Query: 198  QIXXXXXXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLA 19
            QI            I Q++EQEA ++KNKF  PRRS+LEDS+ GQL+DIDVIPN+EMLLA
Sbjct: 536  QISKLEELLSSKKRILQVVEQEAIDIKNKFANPRRSMLEDSDGGQLDDIDVIPNDEMLLA 595

Query: 18   FSEKGY 1
            FSEKGY
Sbjct: 596  FSEKGY 601


>ref|XP_002463658.1| hypothetical protein SORBIDRAFT_01g003750 [Sorghum bicolor]
            gi|241917512|gb|EER90656.1| hypothetical protein
            SORBIDRAFT_01g003750 [Sorghum bicolor]
          Length = 845

 Score =  830 bits (2144), Expect = 0.0
 Identities = 418/544 (76%), Positives = 482/544 (88%), Gaps = 5/544 (0%)
 Frame = -3

Query: 1617 DEGRPEEDS----GERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRAL 1450
            D+GR    +    GE G GG  V+        RI+P ELHKEAT+AYM+YAMSVL+GRAL
Sbjct: 70   DDGRAAAPAAAGGGEDGGGGAAVKE-------RILPVELHKEATQAYMSYAMSVLLGRAL 122

Query: 1449 PDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQ 1270
            PDVRDGLKPVHRRIL+A+HE+G++SRRPFRKCARVVGEVLGKFHPHGD+AVYESLVRMAQ
Sbjct: 123  PDVRDGLKPVHRRILYAMHEMGLASRRPFRKCARVVGEVLGKFHPHGDTAVYESLVRMAQ 182

Query: 1269 DFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQ 1090
            DFSMRYPL++GHGNFGS+DADPPAAMRYTECRL++L EAM LTDL+LNTVDFVPNFDNSQ
Sbjct: 183  DFSMRYPLVQGHGNFGSVDADPPAAMRYTECRLDSLAEAMFLTDLELNTVDFVPNFDNSQ 242

Query: 1089 KEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMP 910
            KEPSLLPAR+P+LLLNGSSGIAVGMATNIPPHNLGELVD L+V+I NPEATLQELLE MP
Sbjct: 243  KEPSLLPARVPSLLLNGSSGIAVGMATNIPPHNLGELVDVLSVIIQNPEATLQELLECMP 302

Query: 909  GPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKAT 730
            GPDFPTGG I+GN GILEAY++GRGRI+VRGK D+E +DEK+KRTAIIIKEIPYQTNKAT
Sbjct: 303  GPDFPTGGTILGNQGILEAYKSGRGRIVVRGKTDIETIDEKSKRTAIIIKEIPYQTNKAT 362

Query: 729  LVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSC 550
            LV+KIAEL E+KVLEGISDIRDES ++ MR+VIELKR++DP I+LNNL+RHTALQSSFSC
Sbjct: 363  LVQKIAELAEDKVLEGISDIRDESDRTGMRVVIELKRSADPAIVLNNLYRHTALQSSFSC 422

Query: 549  NMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDN 370
            NMV IL+GQPKLMGLKE+LQAFLDFRCSVIERRARYKLSQA ERKHIVEGI++GLDNLD 
Sbjct: 423  NMVAILDGQPKLMGLKEILQAFLDFRCSVIERRARYKLSQALERKHIVEGIVIGLDNLDA 482

Query: 369  IIQLIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIX 190
            +IQ+IR +S++T ATGAL++E+ LSEKQAEALLDI+L++LTSLERKKFVDE   L+E+I 
Sbjct: 483  VIQMIRETSNHTAATGALVKEFDLSEKQAEALLDITLKRLTSLERKKFVDEAKILSEEIS 542

Query: 189  XXXXXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLL-AFS 13
                      LIFQLI+QEA +LKNKF TPRRSL++DS   +++DID+IPNEEMLL   S
Sbjct: 543  KLNELLSSKELIFQLIQQEAADLKNKFSTPRRSLIDDSVSCEVDDIDIIPNEEMLLKILS 602

Query: 12   EKGY 1
            EKGY
Sbjct: 603  EKGY 606


>ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 935

 Score =  830 bits (2143), Expect = 0.0
 Identities = 424/568 (74%), Positives = 475/568 (83%)
 Frame = -3

Query: 1704 VRRELSELRFLSTXXXXXXXXXXXXXRDKDEGRPEEDSGERGNGGVLVEPKSSGPGGRIV 1525
            +R   SELRFLS                +   R ++++G                 GR+V
Sbjct: 38   LRHAPSELRFLSARAPRRPASAF-----RSARRRDDENGSVTTAASATTDNGYVSEGRVV 92

Query: 1524 PTELHKEATEAYMAYAMSVLIGRALPDVRDGLKPVHRRILFALHELGMSSRRPFRKCARV 1345
            PTELHKEATEAYMAYAMSVL+GRALPDVRDGLKPVHRRILFA+HELG+SS++PF+KCARV
Sbjct: 93   PTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARV 152

Query: 1344 VGEVLGKFHPHGDSAVYESLVRMAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEA 1165
            VGEVLGKFHPHGD+AVY+SLVRMAQDFS+R PLI+GHGNFGSIDADPPAAMRYTECRL+ 
Sbjct: 153  VGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLDD 212

Query: 1164 LTEAMLLTDLDLNTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLG 985
            LTEAMLLTDL+ +TVDFVPNFDNSQKEPSLLPAR+PTLLLNGSSGIAVGMATNIPPHNLG
Sbjct: 213  LTEAMLLTDLEQDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLG 272

Query: 984  ELVDALAVLIHNPEATLQELLEYMPGPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADV 805
            E+VD L VLIHNPEATLQELLEYMPGPDFPTGGLIMGN+GILEAYRTGRGR+I+RGK D+
Sbjct: 273  EVVDVLCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIIRGKTDI 332

Query: 804  EFLDEKTKRTAIIIKEIPYQTNKATLVEKIAELVENKVLEGISDIRDESAKSEMRIVIEL 625
            E LD KTKRTAIIIKEIPYQTNKATLVEKIAELVENK L+GISDIRDES +S MRIVIEL
Sbjct: 333  ELLDSKTKRTAIIIKEIPYQTNKATLVEKIAELVENKSLDGISDIRDESDRSGMRIVIEL 392

Query: 624  KRASDPNIILNNLFRHTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRAR 445
            KR SDP I+LNNL+R T+LQS+FSCNMVGILNGQPK MGLKELLQAFLDFRCSV+ERRAR
Sbjct: 393  KRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAR 452

Query: 444  YKLSQAQERKHIVEGIIVGLDNLDNIIQLIRGSSSNTMATGALMREYKLSEKQAEALLDI 265
            +KLSQAQER+HIVEGI++G DNLD +I++IR +SSN+ A   L   + LSEKQAEALLDI
Sbjct: 453  FKLSQAQERRHIVEGILIGFDNLDGVIRIIREASSNSAAAAGLRNAFSLSEKQAEALLDI 512

Query: 264  SLRKLTSLERKKFVDEQNSLAEQIXXXXXXXXXXXLIFQLIEQEAFELKNKFGTPRRSLL 85
            SLR+L+  E   FV E  SL EQI            I +LIEQEA ELK+KF  PRRS+L
Sbjct: 513  SLRRLSLRESGNFVAESKSLMEQISKLEELLSSRKNILELIEQEAIELKSKFSNPRRSML 572

Query: 84   EDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
            ED++ GQLEDIDVIPNEEM+LA SEKGY
Sbjct: 573  EDTDNGQLEDIDVIPNEEMILALSEKGY 600


>ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Capsella rubella]
            gi|482565389|gb|EOA29578.1| hypothetical protein
            CARUB_v10012909mg [Capsella rubella]
          Length = 950

 Score =  829 bits (2142), Expect = 0.0
 Identities = 422/598 (70%), Positives = 495/598 (82%), Gaps = 1/598 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRR-ELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            M+LS+ LRL+ S L R  F  PL      +RR E S  RF S+             +  D
Sbjct: 19   MSLSSTLRLSSSLLRRSFFRFPLTDPLCRLRRTEPSTARFFSSRTPRSGKFVVGAAKRAD 78

Query: 1614 EGRPEEDSGERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDVRD 1435
            E    +D     NGG++V    SG   RIVP ELHKEATE+YM+YA+SVL+GRALPDVRD
Sbjct: 79   E--QFKDGSGSNNGGLVV----SGDDSRIVPFELHKEATESYMSYALSVLLGRALPDVRD 132

Query: 1434 GLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMR 1255
            GLKPVHRRILFA+HELGMSS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMAQ FS+R
Sbjct: 133  GLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLR 192

Query: 1254 YPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSL 1075
             PLI+GHGNFGSIDADPPAAMRYTECRL+ L EA+LL+DLD +TVDFV NFDNSQKEP++
Sbjct: 193  CPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAV 252

Query: 1074 LPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFP 895
            LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PDFP
Sbjct: 253  LPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFP 312

Query: 894  TGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKI 715
            TGG+IMGN+G+L+AYRTGRGR++VRGKA+VE LD KTKR A+II EIPYQTNKATLV+KI
Sbjct: 313  TGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKI 372

Query: 714  AELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGI 535
            AELVENK LEGISDIRDES ++ MR+VIELKR  DP ++LNNL+RHTALQSSFSCNMVGI
Sbjct: 373  AELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGI 432

Query: 534  LNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLI 355
             +G+PKLMGLKELLQAF+DFRCSV+ERRAR+KLS AQ+RKHI+EGI+VGLDN+D +IQLI
Sbjct: 433  CDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNMDKVIQLI 492

Query: 354  RGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXX 175
            + ++S++ A  AL  EY LSEKQA+A+L+ISLR+LT+LERKKF DE +SL EQI      
Sbjct: 493  KNATSHSSAATALQSEYGLSEKQADAILEISLRRLTALERKKFTDESSSLTEQITKLEQL 552

Query: 174  XXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                  I +LIEQEA ELK++F +PRRS+LEDS+ G LEDIDVIPNEEML+A SEKGY
Sbjct: 553  LSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAISEKGY 610


>ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Cicer arietinum]
          Length = 944

 Score =  827 bits (2136), Expect = 0.0
 Identities = 433/608 (71%), Positives = 494/608 (81%), Gaps = 7/608 (1%)
 Frame = -3

Query: 1803 HSLAMALSTMLRLTYSSLARYRFPIPLLSAAIPVRRELSELRFLSTXXXXXXXXXXXXXR 1624
            H+  M+ S+  RL   +L+ +    P ++     RR  SELRFLS               
Sbjct: 10   HNSTMSFSSAFRLL--TLSPFT---PTITRFSFFRRTSSELRFLSASTRRRPSISVKASS 64

Query: 1623 DKDEGRPEEDSGERGNGGVLVEPKSSGPG-----GRIVPTELHKEATEAYMAYAMSVLIG 1459
             + +  PE+D    GNG + V   + G G     GRIV TELHKEATEAYM+YAMSVL+G
Sbjct: 65   GRRD-EPEQDGN--GNGSLAVIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVLLG 121

Query: 1458 RALPDVRDGLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVR 1279
            RALPDVRDGLKPVHRRILFA+HELG+SS++PF+KCARVVGEVLGKFHPHGDSAVY+S+VR
Sbjct: 122  RALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSMVR 181

Query: 1278 MAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFD 1099
            MAQDFS+R PL+ GHGNFGSIDADPPAAMRYTECRLE L EAMLL DLD +TVDF PNFD
Sbjct: 182  MAQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPNFD 241

Query: 1098 NSQKEPSLLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEAT--LQEL 925
            NSQKEPS+LPAR+PTLLLNGSSGIAVGMATNIPPHNLGE+VD L V+IHNPEAT  LQEL
Sbjct: 242  NSQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATVSLQEL 301

Query: 924  LEYMPGPDFPTGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQ 745
            LEYMPGPDFPTGGLIMGN+GILEAYRTGRGR+IVRGK D+E LD KTKRTAIIIKEIPYQ
Sbjct: 302  LEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIPYQ 361

Query: 744  TNKATLVEKIAELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQ 565
            TNKA LVEKIAELVENK LEGISDIRDES +S MRIVIELKR SDP I+LNNL+R T+LQ
Sbjct: 362  TNKAALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQ 421

Query: 564  SSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGL 385
            S+FSCNMVGILNGQPK MGLKELLQAFLDFRCSV+ERRAR++LS+AQ+R+H+VEGI+VG 
Sbjct: 422  STFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILVGF 481

Query: 384  DNLDNIIQLIRGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSL 205
            +NLD +I++IR +SSNT+A   L  E+ LSEKQAEALLD+SLR+LT  E   FV E  SL
Sbjct: 482  NNLDRVIRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENKSL 541

Query: 204  AEQIXXXXXXXXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEML 25
             EQI            I +LIEQEA +LKNKF +PRRS+LED++ GQL+DIDVIPNEEML
Sbjct: 542  VEQISKLEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIPNEEML 601

Query: 24   LAFSEKGY 1
            LA SEKGY
Sbjct: 602  LALSEKGY 609


>gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]
          Length = 932

 Score =  827 bits (2135), Expect = 0.0
 Identities = 410/530 (77%), Positives = 477/530 (90%)
 Frame = -3

Query: 1590 GERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDVRDGLKPVHRR 1411
            GE G  G++V+        RI+P ELHKEATEAYM+YAMSVL+GRALPDVRDGLKPVHRR
Sbjct: 85   GEGGGAGLVVKE-------RILPVELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRR 137

Query: 1410 ILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMRYPLIRGHG 1231
            IL+A+HE+G++SRRPFRKCARVVGEVLGKFHPHGD+AVYESLVRMAQDFSMRYPL++GHG
Sbjct: 138  ILYAMHEMGLASRRPFRKCARVVGEVLGKFHPHGDTAVYESLVRMAQDFSMRYPLVQGHG 197

Query: 1230 NFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSLLPARIPTL 1051
            NFGS+DADPPAAMRYTECRL++L EAM LTDL+LNTVDFVPNFDNSQKEPSLLP+R+P+L
Sbjct: 198  NFGSVDADPPAAMRYTECRLDSLAEAMFLTDLELNTVDFVPNFDNSQKEPSLLPSRVPSL 257

Query: 1050 LLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFPTGGLIMGN 871
            LLNGSSGIAVGMATNIPPHNLGELVD L+V+I N EATLQELLE MPGPDFPTGG I+GN
Sbjct: 258  LLNGSSGIAVGMATNIPPHNLGELVDVLSVIIENREATLQELLERMPGPDFPTGGTILGN 317

Query: 870  VGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKIAELVENKV 691
             GILEAY++GRGRI+VRGK D+E +DEK+KRTAIIIKEIPYQTNKATLV+KIAELVE+KV
Sbjct: 318  QGILEAYKSGRGRIVVRGKTDIETIDEKSKRTAIIIKEIPYQTNKATLVQKIAELVEDKV 377

Query: 690  LEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGILNGQPKLM 511
            LEGISDIRDES ++ MR+VIELKR++DP ++LNNL+RHTALQSSFSCNMV IL+GQPKLM
Sbjct: 378  LEGISDIRDESDRTGMRVVIELKRSADPAVVLNNLYRHTALQSSFSCNMVAILDGQPKLM 437

Query: 510  GLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLIRGSSSNTM 331
            GLKE+LQAFLDFRCSVIERRARYKLSQA ERKHIVEGI++GLDNLD +IQ+IR +S++T 
Sbjct: 438  GLKEILQAFLDFRCSVIERRARYKLSQALERKHIVEGIVIGLDNLDAVIQIIRETSNHTA 497

Query: 330  ATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXXXXXXXLIF 151
            AT AL+ E+ LSEKQAEALLDI+L+KLTSLERKKFVDE  +++E+I           LIF
Sbjct: 498  ATRALVNEFDLSEKQAEALLDITLKKLTSLERKKFVDEAKTMSEEISKLNELLSSKKLIF 557

Query: 150  QLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
            QLI+QEA +LK+KF TPRRS+++DS   +++DID+IPNEEMLL  SEKGY
Sbjct: 558  QLIQQEAADLKSKFSTPRRSVIDDSISSEVDDIDIIPNEEMLLILSEKGY 607


>ref|XP_002884807.1| DNA gyrase subunit A family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297330647|gb|EFH61066.1| DNA gyrase subunit A
            family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 950

 Score =  826 bits (2134), Expect = 0.0
 Identities = 422/598 (70%), Positives = 494/598 (82%), Gaps = 1/598 (0%)
 Frame = -3

Query: 1791 MALSTMLRLTYSSLARYRFPIPLLSAAIPVRR-ELSELRFLSTXXXXXXXXXXXXXRDKD 1615
            M+LS+ LRL+ S L R  F  PL      +RR E S  RF S+             +  D
Sbjct: 19   MSLSSTLRLSSSFLRRSFFRFPLTDPLCRLRRTEPSASRFFSSRTPRSGQFVVGASKRAD 78

Query: 1614 EGRPEEDSGERGNGGVLVEPKSSGPGGRIVPTELHKEATEAYMAYAMSVLIGRALPDVRD 1435
            E   EE      NGG++V    SG   RIVP ELHKEATE+YMAYA+SVL+GRALPDVRD
Sbjct: 79   EQFKEESGAN--NGGLVV----SGDESRIVPFELHKEATESYMAYALSVLLGRALPDVRD 132

Query: 1434 GLKPVHRRILFALHELGMSSRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMAQDFSMR 1255
            GLKPVHRRILFA+HELGMSS++P++KCARVVGEVLGKFHPHGD+AVY+SLVRMAQ FS+R
Sbjct: 133  GLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLR 192

Query: 1254 YPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLTDLDLNTVDFVPNFDNSQKEPSL 1075
             PLI+GHGNFGSIDADPPAAMRYTECRL+ L EA+LL+DLD +TVDFV NFDNSQKEP++
Sbjct: 193  CPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAV 252

Query: 1074 LPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALAVLIHNPEATLQELLEYMPGPDFP 895
            LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PDFP
Sbjct: 253  LPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFP 312

Query: 894  TGGLIMGNVGILEAYRTGRGRIIVRGKADVEFLDEKTKRTAIIIKEIPYQTNKATLVEKI 715
            TGG+IMGN+G+L+AYRTGRGR++VRGKA+VE LD KTKR A+II EIPYQTNKATLV+KI
Sbjct: 313  TGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKI 372

Query: 714  AELVENKVLEGISDIRDESAKSEMRIVIELKRASDPNIILNNLFRHTALQSSFSCNMVGI 535
            AELVENK LEGISDIRDES ++ MR+VIELKR  DP ++LNNL+RHTALQSSFSCNMVGI
Sbjct: 373  AELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGI 432

Query: 534  LNGQPKLMGLKELLQAFLDFRCSVIERRARYKLSQAQERKHIVEGIIVGLDNLDNIIQLI 355
             +G+PKLMGLKELLQAF+DFRCSV+ERRAR+KLS AQ+RKH +EGI+VGLDN+D +I+LI
Sbjct: 433  CDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHNIEGIVVGLDNVDEVIKLI 492

Query: 354  RGSSSNTMATGALMREYKLSEKQAEALLDISLRKLTSLERKKFVDEQNSLAEQIXXXXXX 175
            + +SS++ A+ AL  EY LSEKQAEA+L+I+LR+LT+LERKK  DE +SL EQI      
Sbjct: 493  KNASSHSSASAALQSEYGLSEKQAEAILEITLRRLTTLERKKVTDESSSLTEQITKLEQL 552

Query: 174  XXXXXLIFQLIEQEAFELKNKFGTPRRSLLEDSNEGQLEDIDVIPNEEMLLAFSEKGY 1
                  I +LIEQEA ELK++F +PRRS+LEDS+ G LEDIDVIPNEEML+A SEKGY
Sbjct: 553  LSTRANILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAISEKGY 610