BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00000505
         (2654 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30132.3| unnamed protein product [Vitis vinifera]             1057   0.0  
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1056   0.0  
ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm...  1040   0.0  
gb|EMJ05458.1| hypothetical protein PRUPE_ppa001942mg [Prunus pe...  1033   0.0  
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...  1031   0.0  
gb|EOY08861.1| Dna gyrase b2 isoform 1 [Theobroma cacao]             1030   0.0  
ref|XP_006355766.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1027   0.0  
gb|EXB28637.1| DNA gyrase subunit B [Morus notabilis]                1025   0.0  
ref|XP_004252016.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1025   0.0  
dbj|BAK07312.1| predicted protein [Hordeum vulgare subsp. vulgare]   1021   0.0  
ref|XP_006850688.1| hypothetical protein AMTR_s00034p00235670 [A...  1020   0.0  
ref|XP_002323244.2| DNA topoisomerase 2 family protein [Populus ...  1019   0.0  
ref|XP_003566839.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1018   0.0  
ref|XP_002307976.2| hypothetical protein POPTR_0006s03770g [Popu...  1014   0.0  
ref|XP_004967734.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1011   0.0  
gb|ESW34084.1| hypothetical protein PHAVU_001G123100g [Phaseolus...  1007   0.0  
ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1002   0.0  
ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group] g...  1002   0.0  
ref|XP_004493400.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1001   0.0  
ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplast...  1001   0.0  

>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 549/706 (77%), Positives = 588/706 (83%), Gaps = 6/706 (0%)
 Frame = -3

Query: 2496 AQRFRSHSLASFPRPRPCLFS-RTGFLVC----HSPRNEAGRARAFMSSSALSDAVQEKS 2332
            A RF +HS           F  R GF +     H     A   RAFMSSS  +DA QE +
Sbjct: 2    ASRFYAHSSMHSLTSSVLFFKPRVGFQLRRVSNHFLIRNAASPRAFMSSSIATDAFQEST 61

Query: 2331 NTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASRIDV 2152
            +++AYGSEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDNAIDEAQAG+AS++DV
Sbjct: 62   SSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDV 121

Query: 2151 VLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXXXXXXXXXXXXXXXXXXXX 1972
            VLL D SVSITDNGRGIPT++H VTKKSSLETVLT+LHA                     
Sbjct: 122  VLLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVG 181

Query: 1971 XXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPAEFCTRQGTCITFWPDKEV 1792
               VNALSEALEVTVWRDG EY+QKYSRGKPVTSLT   LP E    QGT I FWPDKEV
Sbjct: 182  LSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEV 241

Query: 1791 FTTSINFDFDTIAGRIRELAFLNPELRITLRM-DKGDSKTQYNEYYYAGGLVEYVNWLNT 1615
            FTT I FD++TIAGRIRELAFLNPEL ITLR  DK   K QYNEY YAGGLVEYV WLNT
Sbjct: 242  FTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNT 301

Query: 1614 DKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSIRTIDGGTHIDGMKASLTR 1435
            DKKP+HD + FRK  +GIS+DVALQWCSDAY+DTMLGYANSIRTIDGGTHIDGMKASLTR
Sbjct: 302  DKKPVHDVVGFRKVADGISIDVALQWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASLTR 361

Query: 1434 TINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKVVEQ 1255
            T+NNLGKKSKIIKEKDI LSGEHVREGLTC++SVKVPNPEFEGQTKTRLGNPEVRKVV+Q
Sbjct: 362  TLNNLGKKSKIIKEKDITLSGEHVREGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQ 421

Query: 1254 CVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVRTKSVLKSSSLPGKLADCS 1075
             VQE LTEYLELHPD LDLI                 RELVR KSVLKSSSLPGKLADCS
Sbjct: 422  TVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARELVRQKSVLKSSSLPGKLADCS 481

Query: 1074 ATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIERKDEAAMYKNEEIQNLI 895
            +TNPEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNIERKDEAAMYK+EEIQNLI
Sbjct: 482  STNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKSEEIQNLI 541

Query: 894  LGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYAGV 715
            LGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+ALFDEGCIY GV
Sbjct: 542  LGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGV 601

Query: 714  PPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGLGEMMPSQLWDTTLDPEKR 535
            PPL+KVERGK VHYCYD+AELKQLQ++ P NASY IQRFKGLGEMMP QLW+TT+DPE+R
Sbjct: 602  PPLFKVERGKQVHYCYDDAELKQLQHSLPPNASYSIQRFKGLGEMMPVQLWETTMDPERR 661

Query: 534  LLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLEHLDI 397
            LLKQLVVEDAAEANVVFSSLMGARVD+RKELIQKSA T+KL+ LDI
Sbjct: 662  LLKQLVVEDAAEANVVFSSLMGARVDFRKELIQKSASTMKLDQLDI 707


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 719

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 539/667 (80%), Positives = 576/667 (86%), Gaps = 1/667 (0%)
 Frame = -3

Query: 2394 AGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLV 2215
            A   RAFMSSS  +DA QE ++++AYGSEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLV
Sbjct: 53   AASPRAFMSSSIATDAFQESTSSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLV 112

Query: 2214 YEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHA 2035
            YEILDNAIDEAQAG+AS++DVVLL D SVSITDNGRGIPT++H VTKKSSLETVLT+LHA
Sbjct: 113  YEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHA 172

Query: 2034 XXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHS 1855
                                    VNALSEALEVTVWRDG EY+QKYSRGKPVTSLT   
Sbjct: 173  GGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRV 232

Query: 1854 LPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRM-DKGDSK 1678
            LP E    QGT I FWPDKEVFTT I FD++TIAGRIRELAFLNPEL ITLR  DK   K
Sbjct: 233  LPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEK 292

Query: 1677 TQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYA 1498
             QYNEY YAGGLVEYV WLNTDKKP+HD + FRK  +GIS+DVALQWCSDAY+DTMLGYA
Sbjct: 293  NQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVALQWCSDAYSDTMLGYA 352

Query: 1497 NSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNP 1318
            NSIRTIDGGTHIDGMKASLTRT+NNLGKKSKIIKEKDI LSGEHVREGLTC++SVKVPNP
Sbjct: 353  NSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVISVKVPNP 412

Query: 1317 EFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRE 1138
            EFEGQTKTRLGNPEVRKVV+Q VQE LTEYLELHPD LDLI                 RE
Sbjct: 413  EFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARE 472

Query: 1137 LVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKI 958
            LVR KSVLKSSSLPGKLADCS+TNPEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKI
Sbjct: 473  LVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKI 532

Query: 957  LNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLL 778
            LNIERKDEAAMYK+EEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLL
Sbjct: 533  LNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLL 592

Query: 777  LTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRF 598
            LTFFFRYQ+ALFDEGCIY GVPPL+KVERGK VHYCYD+AELKQLQ++ P NASY IQRF
Sbjct: 593  LTFFFRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNASYSIQRF 652

Query: 597  KGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTI 418
            KGLGEMMP QLW+TT+DPE+RLLKQLVVEDAAEANVVFSSLMGARVD+RKELIQKSA T+
Sbjct: 653  KGLGEMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGARVDFRKELIQKSASTM 712

Query: 417  KLEHLDI 397
            KL+ LDI
Sbjct: 713  KLDQLDI 719


>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
            gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
            putative [Ricinus communis]
          Length = 732

 Score = 1040 bits (2688), Expect = 0.0
 Identities = 535/732 (73%), Positives = 596/732 (81%), Gaps = 6/732 (0%)
 Frame = -3

Query: 2574 MALLRPGASPPLQLRFLARRLFSSA-AAQRFRSHSLASFPRPRPCLFSRTGF----LVCH 2410
            MALL    +  L L  L R L +S  +       S +S  RP      R  F    +   
Sbjct: 1    MALLLKPRNLNLPLPCLLRLLMASRYSPSSLHCQSFSSLSRPLVSFKPRVSFQWRAVTSR 60

Query: 2409 SPRNEAGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRG 2230
                 AG ARAFMSSS  ++  QE ++++AYGS+QIQVL+GL+PVRKRPGMYIGSTG RG
Sbjct: 61   VTVQNAGSARAFMSSSTATEPFQESASSKAYGSDQIQVLKGLEPVRKRPGMYIGSTGPRG 120

Query: 2229 LHHLVYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVL 2050
            LHHLVYEILDNAIDEAQAGYASR+DV+L  D SVSI+DNGRGIPTD+H VTKKS+LETVL
Sbjct: 121  LHHLVYEILDNAIDEAQAGYASRVDVILHSDNSVSISDNGRGIPTDLHPVTKKSALETVL 180

Query: 2049 TILHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTS 1870
            T+LHA                        VNALSE LEVTVWRDG EY+Q+YSRG PVT 
Sbjct: 181  TVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEGLEVTVWRDGMEYRQRYSRGNPVTI 240

Query: 1869 LTCHSLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDK 1690
            L CHSL  E   RQGTC+ FWPDKEVFTT+I FD++TIAGR+RELAFLNP+L ITL+ + 
Sbjct: 241  LMCHSLAVESRDRQGTCVRFWPDKEVFTTAIEFDYNTIAGRVRELAFLNPKLTITLKKED 300

Query: 1689 GD-SKTQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADT 1513
             D  K QY+EY+YAGGL+EYV WLNTDKKPLHD + F KE +GI++D+ALQWCSDAY+DT
Sbjct: 301  NDPEKNQYDEYFYAGGLIEYVKWLNTDKKPLHDVVGFGKEIDGITIDMALQWCSDAYSDT 360

Query: 1512 MLGYANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSV 1333
            +LGYANSIRTIDGGTHIDG KASLTRT+N+LGKKSKIIKEKDINLSGEHVREGLTCIVSV
Sbjct: 361  ILGYANSIRTIDGGTHIDGFKASLTRTLNSLGKKSKIIKEKDINLSGEHVREGLTCIVSV 420

Query: 1332 KVPNPEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXX 1153
            KVP+PEFEGQTKTRLGNPEVRKVV+Q VQE+LTEYLELHPD LD I              
Sbjct: 421  KVPSPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAA 480

Query: 1152 XXXRELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLP 973
               RELVR KSVL++SSLPGKLADCS+TNPEESEIFIVEGDSAGGSAKQGRDRRFQA+LP
Sbjct: 481  KKARELVRQKSVLRTSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILP 540

Query: 972  LRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAH 793
            LRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAH
Sbjct: 541  LRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAH 600

Query: 792  IRTLLLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASY 613
            IRTLLLTFFFRYQKALF+EGCIY GVPPLYKVERGK V+YCYDEAELK+L+++FP NASY
Sbjct: 601  IRTLLLTFFFRYQKALFEEGCIYVGVPPLYKVERGKQVYYCYDEAELKKLRSSFPQNASY 660

Query: 612  GIQRFKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQK 433
             IQRFKGLGEMMP QLW+TT+DPE+RLLKQLVVEDAAEANVVFSSLMGARVD RKELIQ 
Sbjct: 661  NIQRFKGLGEMMPLQLWETTMDPEQRLLKQLVVEDAAEANVVFSSLMGARVDVRKELIQS 720

Query: 432  SAGTIKLEHLDI 397
            SA  + ++ LDI
Sbjct: 721  SARAVNIDLLDI 732


>gb|EMJ05458.1| hypothetical protein PRUPE_ppa001942mg [Prunus persica]
          Length = 738

 Score = 1033 bits (2670), Expect = 0.0
 Identities = 537/740 (72%), Positives = 598/740 (80%), Gaps = 14/740 (1%)
 Frame = -3

Query: 2574 MALLRPGASPPLQLRFLARRLFSSAA--------AQRFRSHSLAS-----FPRPRPCLFS 2434
            MALL     PP  LRF+A R  S ++        +  F S SLA       P+PR  +  
Sbjct: 1    MALLLLRPPPPPYLRFMALRFLSHSSLHPHFPSSSSSFSSSSLARPSLLFNPQPRTHI-P 59

Query: 2433 RTGFLVCHSPRNEAGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMY 2254
              G   C   RN A   RAFMSS+  ++A Q  S + AYGS+QIQVLEGLDPVRKRPGMY
Sbjct: 60   LNGVPSCCVVRN-AVAPRAFMSSTPATEAFQGSSGSNAYGSDQIQVLEGLDPVRKRPGMY 118

Query: 2253 IGSTGSRGLHHLVYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTK 2074
            IGSTG RGLHHLVYEILDNA+DEAQAG+A++I+VVLL DGSVSI DNGRGIPTD+H  TK
Sbjct: 119  IGSTGPRGLHHLVYEILDNAVDEAQAGFATKIEVVLLADGSVSIADNGRGIPTDMHPATK 178

Query: 2073 KSSLETVLTILHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKY 1894
            KS+LETVLT+LHA                        VNALSE LEVTVWRDG EY+QKY
Sbjct: 179  KSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGMEYQQKY 238

Query: 1893 SRGKPVTSLTCHSLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPEL 1714
            SRGKPVT+L+CH LP E   RQGT I FWPDKEVFTT+I+FD++TIAGRIRELAFLNP L
Sbjct: 239  SRGKPVTTLSCHVLPIESQDRQGTRIRFWPDKEVFTTAIHFDYNTIAGRIRELAFLNPNL 298

Query: 1713 RITLRMDKGD-SKTQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQW 1537
             ITLR +  D  K  +NEY+YAGGLVEYV WLNTDKKPLHD + FRKE +GI++DVALQW
Sbjct: 299  MITLRQEDTDPEKNHHNEYFYAGGLVEYVRWLNTDKKPLHDVVGFRKEVDGITIDVALQW 358

Query: 1536 CSDAYADTMLGYANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVRE 1357
            CSDAY+DTMLGYANSIRT+DGGTHIDG KASLTRT+N+LGKKSKIIKEKDI LSGEHVRE
Sbjct: 359  CSDAYSDTMLGYANSIRTVDGGTHIDGTKASLTRTLNSLGKKSKIIKEKDITLSGEHVRE 418

Query: 1356 GLTCIVSVKVPNPEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXX 1177
            GLTC++SVKV NPEFEGQTKTRLGNPEVR+VV+Q +QE+LTEYLELHPD LD I      
Sbjct: 419  GLTCVISVKVANPEFEGQTKTRLGNPEVRRVVDQSLQEYLTEYLELHPDVLDSILSKSLN 478

Query: 1176 XXXXXXXXXXXRELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRD 997
                       RELVR KSVL+SSSLPGKLADCS+TNPEESEIFIVEGDSAGGSAKQGRD
Sbjct: 479  ALKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRD 538

Query: 996  RRFQAVLPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILT 817
            RRFQA+LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILT
Sbjct: 539  RRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILT 598

Query: 816  DADVDGAHIRTLLLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQN 637
            DAD+DGAHIRTLLLTFFFRYQ+ALFDEG IY GVPPLYKVERGK   YCYD+AELK LQ+
Sbjct: 599  DADIDGAHIRTLLLTFFFRYQRALFDEGYIYVGVPPLYKVERGKQAKYCYDDAELKMLQS 658

Query: 636  TFPANASYGIQRFKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVD 457
            +FP NASY IQRFKGLGEMMP+QLW+TT++PE+RLLK+L VEDAAEAN+VFSSLMGARVD
Sbjct: 659  SFPPNASYNIQRFKGLGEMMPAQLWETTMNPEQRLLKRLGVEDAAEANIVFSSLMGARVD 718

Query: 456  YRKELIQKSAGTIKLEHLDI 397
            YRKELI+ SA  + L+ LDI
Sbjct: 719  YRKELIKNSASMVNLDQLDI 738


>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
            subunit [Nicotiana benthamiana]
          Length = 731

 Score = 1031 bits (2665), Expect = 0.0
 Identities = 537/734 (73%), Positives = 595/734 (81%), Gaps = 8/734 (1%)
 Frame = -3

Query: 2574 MALLRPGASPPLQ--LRFLARR-LFSSAAAQRFRSHSLASFPRP----RPCLFSRTGFLV 2416
            MALL+P    PLQ  LR +A R L  S       S S  S  RP     P + ++   L 
Sbjct: 1    MALLKPF---PLQHSLRCMASRFLLHSHYHTHTLSFSSISLSRPSIVLNPRVINKLRRLS 57

Query: 2415 CHSPRNEAGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGS 2236
                       RAFMSSS  ++A QE + ++ YGSEQIQVLEGLDPVRKRPGMYIGSTG 
Sbjct: 58   DAILIRNMVSLRAFMSSSTTTEAFQENTKSKGYGSEQIQVLEGLDPVRKRPGMYIGSTGP 117

Query: 2235 RGLHHLVYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLET 2056
            RGLHHLVYEILDNA+DEAQAG+A++IDVVL  D SVSI DNGRGIPT++H VTKKSSLET
Sbjct: 118  RGLHHLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPVTKKSSLET 177

Query: 2055 VLTILHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPV 1876
            VLT+LHA                        VNALS+ALEVT+WRDGKEY+QKYSRGKP+
Sbjct: 178  VLTVLHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQKYSRGKPI 237

Query: 1875 TSLTCHSLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRM 1696
            T+L CH LP E   RQGT I FWPDKEVFTT + FD++TIAGRIRELAFLNPEL I L+ 
Sbjct: 238  TTLICHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNPELTIALKK 297

Query: 1695 DKGD-SKTQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYA 1519
            +  D  K Q NEY+YAGGLVEYV WLN DKKPLHD L FRKE +GI++D+ALQWCSDAY+
Sbjct: 298  EDIDPEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYS 357

Query: 1518 DTMLGYANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIV 1339
            DTMLGYANSIRTIDGGTHIDG+KA+LTR +NNLGKKSK IKEKDI+LSGEHVREGLTC++
Sbjct: 358  DTMLGYANSIRTIDGGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHVREGLTCVI 417

Query: 1338 SVKVPNPEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXX 1159
            SVKVPNPEFEGQTKTRLGNPEVRKVV+Q VQE+LTEYLELHPD LD I            
Sbjct: 418  SVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAAL 477

Query: 1158 XXXXXRELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAV 979
                 RELVR KSVLKSSSLPGKLADCSATNPEE+EIFIVEGDSAGGSAKQGRDRRFQA+
Sbjct: 478  AAKRARELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAI 537

Query: 978  LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG 799
            LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG
Sbjct: 538  LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG 597

Query: 798  AHIRTLLLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANA 619
            AHIRTLLLTFFFRYQ+ALF+EGCIY GVPPLYKVERGK V+YCYD+AELK++Q +FP+NA
Sbjct: 598  AHIRTLLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNA 657

Query: 618  SYGIQRFKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELI 439
            SY IQRFKGLGEMMP+QLW+TT++PE RLLKQLVVEDAAEANVVFSSLMG+RVD RK+LI
Sbjct: 658  SYNIQRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLI 717

Query: 438  QKSAGTIKLEHLDI 397
            Q SA  + LE LDI
Sbjct: 718  QNSASMMNLEQLDI 731


>gb|EOY08861.1| Dna gyrase b2 isoform 1 [Theobroma cacao]
          Length = 726

 Score = 1030 bits (2663), Expect = 0.0
 Identities = 524/722 (72%), Positives = 592/722 (81%), Gaps = 7/722 (0%)
 Frame = -3

Query: 2541 LQLRFLARRLFSSAAAQRFRS---HSLASFPRPRPCLFSRTGFL---VCHSPRNEAGRAR 2380
            L+  +L  RL +S++     S   HSLAS PR       R  F    +C  P       +
Sbjct: 5    LRYPYLHLRLMASSSRFFLHSPCFHSLASLPRSSLFFKPRKSFALRSICRLPVQNVVTPK 64

Query: 2379 AFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILD 2200
            AFMSS+  ++A Q   +++AY SEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILD
Sbjct: 65   AFMSSNITTEAFQGSKSSKAYNSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILD 124

Query: 2199 NAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXXXX 2020
            NA+DEAQAG+A++I+VVLL DGSVSITDNGRGIPTD+H +TKKS+LETVLT+LHA     
Sbjct: 125  NAVDEAQAGFATQINVVLLSDGSVSITDNGRGIPTDLHPITKKSALETVLTVLHAGGKFG 184

Query: 2019 XXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPAEF 1840
                               VNALSE LEVTVWRDG EY+QKYSRGKPV++LTCH L  E 
Sbjct: 185  GSSSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGMEYEQKYSRGKPVSTLTCHVLSTES 244

Query: 1839 CTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRM-DKGDSKTQYNE 1663
              RQGTCI FWPDKE+FTT+I FD++T+AGRIRELAFLNP+L ITL+  D    K+ YNE
Sbjct: 245  KHRQGTCIRFWPDKEIFTTAIEFDYNTLAGRIRELAFLNPKLTITLKKEDNNPEKSLYNE 304

Query: 1662 YYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSIRT 1483
            Y++AGGLVEYV WLNTDKKPLHD L F +  +G ++DVALQWCSDAY+DTMLGYANSIRT
Sbjct: 305  YFFAGGLVEYVKWLNTDKKPLHDVLGFSRRIDGATIDVALQWCSDAYSDTMLGYANSIRT 364

Query: 1482 IDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFEGQ 1303
            IDGGTHI+G+KASLTRT+NNLGKKSK+IK+KDI+LSGEHVREGLTCI+SVK+PNPEFEGQ
Sbjct: 365  IDGGTHIEGVKASLTRTLNNLGKKSKVIKDKDISLSGEHVREGLTCIISVKIPNPEFEGQ 424

Query: 1302 TKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVRTK 1123
            TKTRLGNPEVRKVV+Q VQE L E+LELHPD LD I                 RELVR K
Sbjct: 425  TKTRLGNPEVRKVVDQSVQEFLAEFLELHPDVLDSILSKSLNAFKAALAAKRARELVRQK 484

Query: 1122 SVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIER 943
            SVLKSSSLPGKLADCS+TNPEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNIER
Sbjct: 485  SVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 544

Query: 942  KDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFF 763
            +DEAAMYKNEEIQNLILGLGLGVKGEDFKKE LRYHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 545  RDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFF 604

Query: 762  RYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGLGE 583
            RYQ+ALFDEGCIY GVPPLYKVERGK V+YCYD+++LK++Q+ FP NASY IQRFKGLGE
Sbjct: 605  RYQRALFDEGCIYVGVPPLYKVERGKQVYYCYDDSDLKRVQSMFPQNASYNIQRFKGLGE 664

Query: 582  MMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLEHL 403
            MMP+QLW+TT+DP++RLLKQLVVEDAAEAN+VFSSLMGARVD RKELIQ SA  I L+ L
Sbjct: 665  MMPAQLWETTMDPDQRLLKQLVVEDAAEANMVFSSLMGARVDARKELIQNSASKINLDKL 724

Query: 402  DI 397
            DI
Sbjct: 725  DI 726


>ref|XP_006355766.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Solanum tuberosum]
          Length = 729

 Score = 1027 bits (2656), Expect = 0.0
 Identities = 517/663 (77%), Positives = 566/663 (85%), Gaps = 1/663 (0%)
 Frame = -3

Query: 2382 RAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEIL 2203
            RAFMSSS  ++A QE   ++AYGSEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEIL
Sbjct: 67   RAFMSSSITTEAFQENIKSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEIL 126

Query: 2202 DNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXXX 2023
            DNA+DEAQAGYA++IDV L  D SV ITDNGRGIPT++H VTKKSSLETVLT+LHA    
Sbjct: 127  DNAVDEAQAGYATKIDVALHADNSVGITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKF 186

Query: 2022 XXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPAE 1843
                                VNALSEALEVT+WRDGKEYKQKYSRGKPVT+L C  LP E
Sbjct: 187  GGSSSGYSVSGGLHGVGLSVVNALSEALEVTIWRDGKEYKQKYSRGKPVTTLICQELPME 246

Query: 1842 FCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGD-SKTQYN 1666
               RQGT I FWPDKEVFTT I FD++TIAGRIRELAFLNPEL I L+ D  D  K Q+ 
Sbjct: 247  MKDRQGTSIQFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELTIVLKKDDIDPEKIQHA 306

Query: 1665 EYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSIR 1486
            EY+YAGGLVEYV WLN DKKPLHD L FRKE +GI++D+ALQWCSDAY+DTMLGYANSIR
Sbjct: 307  EYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDTMLGYANSIR 366

Query: 1485 TIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFEG 1306
            TIDGGTHIDG+KA+LTRT+N+LGKKSK IKEKDINLSGEHVREGLTC++SVKVPNPEFEG
Sbjct: 367  TIDGGTHIDGVKAALTRTLNSLGKKSKTIKEKDINLSGEHVREGLTCVISVKVPNPEFEG 426

Query: 1305 QTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVRT 1126
            QTKTRLGNPEVRKVV+Q VQE+LTEYLELHPD LD I                 RELVR 
Sbjct: 427  QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRARELVRQ 486

Query: 1125 KSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIE 946
            KSVL+SSSLPGKLADCSATNPEE+EIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNIE
Sbjct: 487  KSVLRSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIE 546

Query: 945  RKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF 766
            RKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF
Sbjct: 547  RKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF 606

Query: 765  FRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGLG 586
            FRYQ+ALF+EGCIY GVPPLYKVERGK  +YCYD+ EL+++Q +FP+NASY IQRFKGLG
Sbjct: 607  FRYQRALFEEGCIYVGVPPLYKVERGKQAYYCYDDVELRKVQRSFPSNASYNIQRFKGLG 666

Query: 585  EMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLEH 406
            EMMP+QLW+TT++PE RLLKQLVVEDAAEANVVFSSLMG++VD RK+LIQ SA  I LE 
Sbjct: 667  EMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSKVDVRKQLIQHSASMINLEQ 726

Query: 405  LDI 397
            LDI
Sbjct: 727  LDI 729


>gb|EXB28637.1| DNA gyrase subunit B [Morus notabilis]
          Length = 749

 Score = 1025 bits (2649), Expect = 0.0
 Identities = 532/742 (71%), Positives = 595/742 (80%), Gaps = 25/742 (3%)
 Frame = -3

Query: 2547 PPLQLRFLARRLFSSAAAQRFRSHSLASFPRPRPCLFSRTGFLVCHSPRNEAG------- 2389
            PPL LR +A R F S ++     +S +S    RP LF +T        RN +        
Sbjct: 9    PPLYLRLMASR-FVSFSSLHSHYYSSSSLLLSRPLLFLKTPRTSFRLKRNSSNGFLLPNV 67

Query: 2388 -RARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVY 2212
               RAFMSS A ++A +  + ++AYGS+QIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVY
Sbjct: 68   VAPRAFMSSGAATEATKGSAGSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVY 127

Query: 2211 EILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAX 2032
            EILDNA+DEAQAG+AS+IDVVL ED SVSI DNGRGIP D+H VTKKSSLETVLT+LHA 
Sbjct: 128  EILDNAVDEAQAGFASKIDVVLHEDDSVSIADNGRGIPIDLHPVTKKSSLETVLTVLHAG 187

Query: 2031 XXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSL 1852
                                   VNALSEALEVT+WRD  EY+QKYSRGKPVT+L  H+L
Sbjct: 188  GKFGGSSSGYSVSGGLHGVGLSVVNALSEALEVTIWRDEMEYQQKYSRGKPVTTLISHAL 247

Query: 1851 PAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGD-SKT 1675
            P E   +QGT I FWPDKEVFTT I FD++TIAGRIRELAFLNP L I L+ +  D +K 
Sbjct: 248  PVELKDQQGTRIRFWPDKEVFTTEIEFDYNTIAGRIRELAFLNPLLTINLKKEDSDPAKI 307

Query: 1674 QYNEYYYAGGLVEYVNWLNTDK----------------KPLHDTLAFRKETEGISVDVAL 1543
            Q +EY+YAGGLVEYV WLNTDK                KPLHD + FRK+ +GI++DVAL
Sbjct: 308  QSHEYFYAGGLVEYVKWLNTDKVVLNVLRLLTNSSLIQKPLHDIVGFRKQVDGIAIDVAL 367

Query: 1542 QWCSDAYADTMLGYANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHV 1363
            QW SDAY+DTMLGYANSIRT+DGGTHIDG+KA+LTRT+NNLGKKSKI+KEKD+ LSGEHV
Sbjct: 368  QWSSDAYSDTMLGYANSIRTVDGGTHIDGIKAALTRTLNNLGKKSKIVKEKDLTLSGEHV 427

Query: 1362 REGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXX 1183
            REGLTC++SVKVPNPEFEGQTKTRLGNPEVRKVV+Q VQE+LTEYLELHPD LD I    
Sbjct: 428  REGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKA 487

Query: 1182 XXXXXXXXXXXXXRELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQG 1003
                         RELVR KSVL+SSSLPGKLADCS+TNPEESEIFIVEGDSAGGSAKQG
Sbjct: 488  LNALKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQG 547

Query: 1002 RDRRFQAVLPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII 823
            RDRRFQA+LPLRGKILNIERKDEA+MYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII
Sbjct: 548  RDRRFQAILPLRGKILNIERKDEASMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII 607

Query: 822  LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQL 643
            LTDADVDGAHIRTLLLTFFFRYQKALFD GCIY GVPPLYKVERGK V+YC+D+ ELK+L
Sbjct: 608  LTDADVDGAHIRTLLLTFFFRYQKALFDAGCIYVGVPPLYKVERGKQVYYCFDDVELKKL 667

Query: 642  QNTFPANASYGIQRFKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGAR 463
            Q++FP+NASY IQRFKGLGEMMP+QLW+TTLDPE+RLLKQLVVEDAAEAN+VFSSLMGAR
Sbjct: 668  QSSFPSNASYNIQRFKGLGEMMPAQLWETTLDPEQRLLKQLVVEDAAEANIVFSSLMGAR 727

Query: 462  VDYRKELIQKSAGTIKLEHLDI 397
            VDYRKELIQ SA  I L+ LDI
Sbjct: 728  VDYRKELIQNSANMIDLDQLDI 749


>ref|XP_004252016.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Solanum lycopersicum]
          Length = 729

 Score = 1025 bits (2649), Expect = 0.0
 Identities = 534/737 (72%), Positives = 597/737 (81%), Gaps = 11/737 (1%)
 Frame = -3

Query: 2574 MALLRPGASPPLQLRFLARRLFSSAAAQRFRSHSL---ASFPRPRPCLFSRTGFLVCHSP 2404
            MALL+P       L++  RR+ +S       SH+L   ++F  P P +F  T  ++    
Sbjct: 1    MALLKP-----FPLQYSLRRM-ASRYLLHCHSHTLPFSSTFLSP-PSIFLNTR-VITRLR 52

Query: 2403 RNEAG-------RARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGS 2245
            R   G         RAFMSSS  ++A QE + ++AYGSEQIQVLEGLDPVRKRPGMYIGS
Sbjct: 53   RVSDGIFIRNVVSPRAFMSSSVTTEAFQENTKSKAYGSEQIQVLEGLDPVRKRPGMYIGS 112

Query: 2244 TGSRGLHHLVYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSS 2065
            TG RGLHHLVYEILDNA+DEAQAG+A++IDVVL  D SV ITDNGRGIPT++H VTKKSS
Sbjct: 113  TGPRGLHHLVYEILDNAVDEAQAGFATKIDVVLHADNSVGITDNGRGIPTELHPVTKKSS 172

Query: 2064 LETVLTILHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRG 1885
            LETVLT+LHA                        VNALSEALEVT+WRDGKEY+QKYSRG
Sbjct: 173  LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSEALEVTIWRDGKEYQQKYSRG 232

Query: 1884 KPVTSLTCHSLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRIT 1705
            KPVT+L C  LP E    QGT I FWPDKEVFTT I FD++TIAGRIRELAFLNPEL I 
Sbjct: 233  KPVTTLICQELPVEIKDWQGTSIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELTIV 292

Query: 1704 LRMDKGD-SKTQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSD 1528
            L+ D  D  K Q+ EY+YAGGLVEYV WLN DKKPLHD L FRKE +GI++D+ALQWCSD
Sbjct: 293  LKKDDIDPEKIQHAEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSD 352

Query: 1527 AYADTMLGYANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLT 1348
            AY+DT+LGYANSIRTIDGGTHIDG+KA+LTRT+N+LGKKSK IKEKDINLSGEHVREGLT
Sbjct: 353  AYSDTVLGYANSIRTIDGGTHIDGVKAALTRTLNSLGKKSKTIKEKDINLSGEHVREGLT 412

Query: 1347 CIVSVKVPNPEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXX 1168
            C++SVKVPNPEFEGQTKTRLGNPEVRKVV+Q VQE+LTEYLELHPD LD I         
Sbjct: 413  CVISVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALK 472

Query: 1167 XXXXXXXXRELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRF 988
                    RELVR KSVL+SSSLPGKLADCSATNPEE+EIFIVEGDSAGGSAKQGRDRRF
Sbjct: 473  AALAAKRARELVRQKSVLRSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRF 532

Query: 987  QAVLPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDAD 808
            QA+LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDAD
Sbjct: 533  QAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDAD 592

Query: 807  VDGAHIRTLLLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFP 628
            VDGAHIRTLLLTFFFRYQ+ALF+EGCIY GVPPLYKVERGK  +YCYD+ ELK++Q +FP
Sbjct: 593  VDGAHIRTLLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQAYYCYDDVELKKVQRSFP 652

Query: 627  ANASYGIQRFKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRK 448
            +NASY IQRFKGLGEMMP+QLW+TT++PE RLLKQLVVEDAAEANVVFSSLMG++VD RK
Sbjct: 653  SNASYNIQRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSKVDVRK 712

Query: 447  ELIQKSAGTIKLEHLDI 397
            +LIQ SA  I LE LDI
Sbjct: 713  QLIQHSASMINLEQLDI 729


>dbj|BAK07312.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 722

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 521/726 (71%), Positives = 585/726 (80%)
 Frame = -3

Query: 2574 MALLRPGASPPLQLRFLARRLFSSAAAQRFRSHSLASFPRPRPCLFSRTGFLVCHSPRNE 2395
            MALL   + PP  LR L RRL S+A A       L + P P   L  R   +    P   
Sbjct: 1    MALLLRPSPPPPHLRLLLRRLLSTAPAPS----RLLTVPPPSARLPFRPRVVAAAVPGRN 56

Query: 2394 AGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLV 2215
                RAFM+S+A SDA+QEK     Y +  +QVLE LD VRKRPGMYIGSTG RGLHHLV
Sbjct: 57   GVAVRAFMASTAASDAMQEKRVAGEYTAANVQVLEALDGVRKRPGMYIGSTGPRGLHHLV 116

Query: 2214 YEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHA 2035
            YEILDNA+DEAQAGYA+ I+VVL +D SVS+TDNGRGIPTD+H  TKKS +ETVLT++HA
Sbjct: 117  YEILDNAVDEAQAGYATEINVVLHDDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMHA 176

Query: 2034 XXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHS 1855
                                    VNALSEALEVTV RDGKEY+Q YSRGKP+T L+  +
Sbjct: 177  GGKFGGSTSSYSVAGGLHGVGLSVVNALSEALEVTVCRDGKEYRQHYSRGKPLTMLSSTT 236

Query: 1854 LPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGDSKT 1675
            LP E  +RQG+CI FWPDKE+FTT+I FDF TI+ RIRELAFLNPEL ITL  ++ D++ 
Sbjct: 237  LPDESSSRQGSCIRFWPDKEIFTTTIEFDFSTISSRIRELAFLNPELTITLTKEEQDAQV 296

Query: 1674 QYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYAN 1495
            Q+NEY YAGGLVEYV WLNTDKKPLHD +AFRKE +GI VDV+LQWCSD+Y+DT+LGYAN
Sbjct: 297  QHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSLQWCSDSYSDTVLGYAN 356

Query: 1494 SIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPE 1315
            SIRTIDGGTHI+G+K SLTRTINN  KKSKI+K+KDI+LSGEHVREG+TCI+SVKVPNPE
Sbjct: 357  SIRTIDGGTHIEGLKTSLTRTINNFAKKSKIMKDKDISLSGEHVREGMTCIISVKVPNPE 416

Query: 1314 FEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXREL 1135
            FEGQTKTRLGNPEVR++VEQ VQE+LTEYLELHPD LD I                 REL
Sbjct: 417  FEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRAREL 476

Query: 1134 VRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKIL 955
            VRTKSVLKSSSLPGKLADC+++NP E EIFIVEGDSAGGSAKQGRDR+FQA+LPLRGKIL
Sbjct: 477  VRTKSVLKSSSLPGKLADCASSNPAECEIFIVEGDSAGGSAKQGRDRKFQAILPLRGKIL 536

Query: 954  NIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLL 775
            NIER+DEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKI+ILTDADVDGAHIRTLLL
Sbjct: 537  NIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIVILTDADVDGAHIRTLLL 596

Query: 774  TFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFK 595
            TFFFRYQ+ALFDEGCIY GVPPLYKVERGK VHYCYDEA+LK L NTFP NASY  QRFK
Sbjct: 597  TFFFRYQRALFDEGCIYVGVPPLYKVERGKQVHYCYDEADLKDLVNTFPTNASYNTQRFK 656

Query: 594  GLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIK 415
            GLGEMMP QLW+TT+DPE+RLLKQL VEDA EANVVFSSLMGARV+YRKELIQK+A  + 
Sbjct: 657  GLGEMMPLQLWETTMDPERRLLKQLTVEDAVEANVVFSSLMGARVEYRKELIQKAASIVN 716

Query: 414  LEHLDI 397
            L+HLDI
Sbjct: 717  LDHLDI 722


>ref|XP_006850688.1| hypothetical protein AMTR_s00034p00235670 [Amborella trichopoda]
            gi|548854357|gb|ERN12269.1| hypothetical protein
            AMTR_s00034p00235670 [Amborella trichopoda]
          Length = 747

 Score = 1020 bits (2637), Expect = 0.0
 Identities = 514/663 (77%), Positives = 565/663 (85%), Gaps = 1/663 (0%)
 Frame = -3

Query: 2382 RAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEIL 2203
            RAF SS+   +A Q   ++  YGSEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEIL
Sbjct: 86   RAFTSSTISPEAFQGTLSSTTYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEIL 145

Query: 2202 DNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXXX 2023
            DNAIDEAQAG+A+R+DVVL  D SVSITDNGRGIPT+ H VTKKS+LETVLT+LHA    
Sbjct: 146  DNAIDEAQAGFATRVDVVLHSDNSVSITDNGRGIPTEFHQVTKKSALETVLTVLHAGGKF 205

Query: 2022 XXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPAE 1843
                                VNALSEALE+TVWRDG+EY+Q YSRGKPVT LT H LP E
Sbjct: 206  GGSRSGYSVSGGLHGVGLSVVNALSEALEITVWRDGREYQQTYSRGKPVTDLTSHMLPTE 265

Query: 1842 FCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITL-RMDKGDSKTQYN 1666
              +RQGTCI FWPD+EVFTT+I+FD++TIAGRIRELAFLN +L ITL +MD    K QYN
Sbjct: 266  LNSRQGTCIRFWPDREVFTTTISFDYNTIAGRIRELAFLNTDLAITLTKMDMDSQKAQYN 325

Query: 1665 EYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSIR 1486
            EY YAGGLVEYV WLNTDKKP+HD +  +K+ +GI+VDVALQWCSDAY DT+LGYANSIR
Sbjct: 326  EYCYAGGLVEYVKWLNTDKKPIHDPVFLQKKADGITVDVALQWCSDAYTDTLLGYANSIR 385

Query: 1485 TIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFEG 1306
            T+DGGTHIDG+KASLTRT+NNLGKKSK+IKE DINLSGEHVREGLTCIVSVKVPNPEFEG
Sbjct: 386  TVDGGTHIDGLKASLTRTLNNLGKKSKVIKE-DINLSGEHVREGLTCIVSVKVPNPEFEG 444

Query: 1305 QTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVRT 1126
            QTKTRLGNPEVR+VV+Q VQEHLTEYLELHPD LD +                 RELVRT
Sbjct: 445  QTKTRLGNPEVRRVVDQSVQEHLTEYLELHPDILDSVLLKSLNALKAAMAAKRARELVRT 504

Query: 1125 KSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIE 946
            KSVLKSSSLPGKLADCS+ NPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIE
Sbjct: 505  KSVLKSSSLPGKLADCSSMNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIE 564

Query: 945  RKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF 766
            RKDEAAMYKNEEIQNLILGLGLGVKGEDF+K+ALRYHKIIILTDADVDGAHIRTLLLTFF
Sbjct: 565  RKDEAAMYKNEEIQNLILGLGLGVKGEDFRKDALRYHKIIILTDADVDGAHIRTLLLTFF 624

Query: 765  FRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGLG 586
            FRYQK+LFDEGCIY GVPPL+KVERGK VHYCY++ ELKQLQ+ FP  ASY IQRFKGLG
Sbjct: 625  FRYQKSLFDEGCIYVGVPPLFKVERGKQVHYCYNDMELKQLQDAFPPTASYNIQRFKGLG 684

Query: 585  EMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLEH 406
            EMMP QLW+TTLDP+KR+LKQLVVEDAA+AN+VFSSLMG+RVD+RKELIQ SA  I  +H
Sbjct: 685  EMMPIQLWETTLDPDKRVLKQLVVEDAAKANLVFSSLMGSRVDFRKELIQSSASMINFDH 744

Query: 405  LDI 397
            LDI
Sbjct: 745  LDI 747


>ref|XP_002323244.2| DNA topoisomerase 2 family protein [Populus trichocarpa]
            gi|550320744|gb|EEF05005.2| DNA topoisomerase 2 family
            protein [Populus trichocarpa]
          Length = 722

 Score = 1019 bits (2635), Expect = 0.0
 Identities = 519/728 (71%), Positives = 588/728 (80%), Gaps = 4/728 (0%)
 Frame = -3

Query: 2568 LLRPGASPPLQLRFLARRLFSSAAAQRFRSHSLASFPRPRPCLFSRTGFLVCHSPRN--- 2398
            LL+P  S    L  L   + SS+ +    SHS +   RP     SR  F     P     
Sbjct: 5    LLKPHNSSRHYLSLLRASMASSSFSC---SHSFSFLSRPSVSFNSRVSFPARRVPSRFLV 61

Query: 2397 -EAGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHH 2221
                  RAFMS+S  +++ QE + ++AYGS+QIQVL+GL+PVRKRPGMYIGSTG RGLHH
Sbjct: 62   QNGVSPRAFMSTSVATESQQESAGSKAYGSDQIQVLKGLEPVRKRPGMYIGSTGPRGLHH 121

Query: 2220 LVYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTIL 2041
            LVYEILDNA+DEAQAGYAS I+VVL  D SVSITDNGRGIPTD+H  TKKS+LETVLT+L
Sbjct: 122  LVYEILDNAVDEAQAGYASTINVVLHSDNSVSITDNGRGIPTDLHPETKKSALETVLTVL 181

Query: 2040 HAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTC 1861
            HA                        VNALSE LEVTVWRDGK+Y+QKYSRG PVT+LTC
Sbjct: 182  HAGGKFGGSNSGYRVSGGLHGVGLSVVNALSEELEVTVWRDGKQYQQKYSRGNPVTTLTC 241

Query: 1860 HSLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGDS 1681
            H LP E   R+GT I FWPDKEVFTT I FD+ TIAGR+RELAFLNP+       D    
Sbjct: 242  HELPVESKERRGTHIKFWPDKEVFTTEIQFDYHTIAGRVRELAFLNPK-------DNDPE 294

Query: 1680 KTQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGY 1501
            K Q++E++YAGGLVEYVNWLNTDKKPLHD L FRKE +GI++D+ALQWCSDAY+DT+LGY
Sbjct: 295  KNQFDEHFYAGGLVEYVNWLNTDKKPLHDVLGFRKEVDGIAIDMALQWCSDAYSDTILGY 354

Query: 1500 ANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPN 1321
            ANSIRT+DGGTHIDG KASLTRT+NNLGKKSK+IK+KD++LSGEHVREGLTCI+SVKVP+
Sbjct: 355  ANSIRTVDGGTHIDGAKASLTRTLNNLGKKSKVIKDKDMSLSGEHVREGLTCIISVKVPS 414

Query: 1320 PEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXR 1141
            PEFEGQTKTRLGNPEVRKVVEQ +QE+LTEYLELHPD LD I                 R
Sbjct: 415  PEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDALDSILSKSLNALKAALAAKRAR 474

Query: 1140 ELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGK 961
            ELVR KSVLKSSSLPGKLADCS+T+PEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRGK
Sbjct: 475  ELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 534

Query: 960  ILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 781
            ILNIER+DEAAMYKNEEIQNLILGLGLGVKGEDFKK+ALRYHKIIILTDADVDGAHIRTL
Sbjct: 535  ILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTL 594

Query: 780  LLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQR 601
            LLTFFFRYQ+ALFDEGCIY GVPPLYKVERGK  +YC+D+AELK++Q +FP NASY IQR
Sbjct: 595  LLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAYYCFDDAELKKIQRSFPQNASYNIQR 654

Query: 600  FKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGT 421
            FKGLGEMMP+QLW+TT+DPE+R+LKQLVVEDAAEAN+VFSSLMG RVD+RKELIQ +A  
Sbjct: 655  FKGLGEMMPAQLWETTMDPERRVLKQLVVEDAAEANIVFSSLMGTRVDFRKELIQNAASM 714

Query: 420  IKLEHLDI 397
            I ++HLDI
Sbjct: 715  INVDHLDI 722


>ref|XP_003566839.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Brachypodium distachyon]
          Length = 723

 Score = 1018 bits (2632), Expect = 0.0
 Identities = 519/725 (71%), Positives = 591/725 (81%), Gaps = 1/725 (0%)
 Frame = -3

Query: 2568 LLRPGASPPL-QLRFLARRLFSSAAAQRFRSHSLASFPRPRPCLFSRTGFLVCHSPRNEA 2392
            LLRP  SPPL  LRFL RRL S+AA         ++  RP   LF         +PR   
Sbjct: 4    LLRP--SPPLPHLRFLLRRLLSTAAPTSRLLPVPSTSARP---LFRPRVVAAAAAPRRNG 58

Query: 2391 GRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVY 2212
               RAFM+S+A S+A+QEK  +  Y +  +QVLE LD VRKRPGMYIGSTG RGLHHLVY
Sbjct: 59   VSVRAFMASTAASEAMQEKPASGEYTAANVQVLEALDGVRKRPGMYIGSTGPRGLHHLVY 118

Query: 2211 EILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAX 2032
            EILDNA+DEAQAGYA++I+VVL +D SVS+TDNGRGIPTD+H  TKKS +ETVLT++HA 
Sbjct: 119  EILDNAVDEAQAGYATKINVVLHDDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMHAG 178

Query: 2031 XXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSL 1852
                                   VNALSEAL+VTV+RDGKEY+Q YSRGKP+T+L+  ++
Sbjct: 179  GKFGGSTSSYSVAGGLHGVGLSVVNALSEALDVTVYRDGKEYRQSYSRGKPLTTLSSTTV 238

Query: 1851 PAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGDSKTQ 1672
              E  TRQGTCI FWPDK++FTT+I FDF+TI+ RIRELAFLNPEL ITL  ++ D++  
Sbjct: 239  YGESSTRQGTCIRFWPDKDIFTTTIGFDFNTISSRIRELAFLNPELTITLTKEEDDAEVL 298

Query: 1671 YNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANS 1492
            +NEY YAGGLVEYV WLNTDKKPLHD +AFRKE +GI VDV+LQWCSD+Y+DT+LGYANS
Sbjct: 299  HNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSLQWCSDSYSDTVLGYANS 358

Query: 1491 IRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEF 1312
            IRTIDGGTHI+G+K SLTRT+N+  K SK IK+KDI+LSGEHVREG+TCI++VKVPNPEF
Sbjct: 359  IRTIDGGTHIEGLKTSLTRTVNSFAKNSKAIKDKDISLSGEHVREGMTCIIAVKVPNPEF 418

Query: 1311 EGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELV 1132
            EGQTKTRLGNPEVRK+VEQ VQE+LTEYLELHPD LD I                 RELV
Sbjct: 419  EGQTKTRLGNPEVRKIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRARELV 478

Query: 1131 RTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILN 952
            RTKSVLKSSSLPGKLADC+++NP ESEIFIVEGDSAGGSAKQGRDR+FQA+LPLRGKILN
Sbjct: 479  RTKSVLKSSSLPGKLADCASSNPAESEIFIVEGDSAGGSAKQGRDRKFQAILPLRGKILN 538

Query: 951  IERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLT 772
            IER+DEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLT
Sbjct: 539  IERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLT 598

Query: 771  FFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKG 592
            FFFRYQ+ALFDEGCIY GVPPLYK+ERGK  HYCYDEA+LK+L NTFP NASY  QRFKG
Sbjct: 599  FFFRYQRALFDEGCIYVGVPPLYKIERGKQAHYCYDEADLKELVNTFPTNASYNTQRFKG 658

Query: 591  LGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKL 412
            LGEMMP QLW+TT+DP +RLLKQL VEDAAEANVVFSSLMG+RVDYRKELIQK+AG + L
Sbjct: 659  LGEMMPVQLWETTMDPARRLLKQLTVEDAAEANVVFSSLMGSRVDYRKELIQKAAGMVNL 718

Query: 411  EHLDI 397
            EHLDI
Sbjct: 719  EHLDI 723


>ref|XP_002307976.2| hypothetical protein POPTR_0006s03770g [Populus trichocarpa]
            gi|550335399|gb|EEE91499.2| hypothetical protein
            POPTR_0006s03770g [Populus trichocarpa]
          Length = 733

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 513/729 (70%), Positives = 598/729 (82%), Gaps = 5/729 (0%)
 Frame = -3

Query: 2568 LLRPGASPPLQLRFLARRLFSSAAAQRFRSHSLASFPRPRPCLFSRTGFLVCHSPRN--- 2398
            LL+P  S    +  L   + SS+++    SHS +S  RP      R  F +   P     
Sbjct: 5    LLKPHNSSRHCISLLRATMTSSSSSSVTWSHSFSSLSRPLVSFKPRVSFPLRTVPSRFLV 64

Query: 2397 -EAGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHH 2221
                  RA MS+SA +++ +E ++++AYGS+QIQVL+GL+PVRKRPGMYIGSTG RGLHH
Sbjct: 65   QNGVSPRALMSTSAATESQKESASSKAYGSDQIQVLKGLEPVRKRPGMYIGSTGPRGLHH 124

Query: 2220 LVYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTIL 2041
            LVYEILDNA+DEAQAGYAS+I+VVL  D S+SITDNGRGIPTD+H VTKKS+LETVLT+L
Sbjct: 125  LVYEILDNAVDEAQAGYASKINVVLHSDNSISITDNGRGIPTDLHQVTKKSALETVLTVL 184

Query: 2040 HAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTC 1861
            HA                        VNALSE LEVTVWRDGKEY+QKYSRG PVT+L C
Sbjct: 185  HAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEELEVTVWRDGKEYQQKYSRGNPVTTLMC 244

Query: 1860 HSLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGD- 1684
            + L AE   ++GT I FWPDKEVFTT I FD++T+ GR+RELAFLNP+L I+L+ +  D 
Sbjct: 245  YELSAESKDQKGTRIRFWPDKEVFTTEIQFDYNTVGGRVRELAFLNPKLAISLKKEDNDP 304

Query: 1683 SKTQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLG 1504
             K QY+E++YAGGL+EYVNWLNTDKK LHD ++FRKE +GI++D+ALQWCSDAY+DT+LG
Sbjct: 305  EKNQYDEHFYAGGLIEYVNWLNTDKKSLHDVVSFRKEVDGIAIDMALQWCSDAYSDTILG 364

Query: 1503 YANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVP 1324
            YANSIRT+DGGTHIDG+KASLTRT+NN GKKSK+IK+KDI+LSGEHVREGLTCI+SVKVP
Sbjct: 365  YANSIRTVDGGTHIDGVKASLTRTLNNFGKKSKVIKDKDISLSGEHVREGLTCIISVKVP 424

Query: 1323 NPEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXX 1144
            +PEFEGQTKTRLGNPEVRKVVEQ VQE+LTEYLELHPD LD I                 
Sbjct: 425  SPEFEGQTKTRLGNPEVRKVVEQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRA 484

Query: 1143 RELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRG 964
            RELVR KSVLKSSSLPGKLADCS+T+PEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRG
Sbjct: 485  RELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG 544

Query: 963  KILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRT 784
            KILNIER+DE AMYKNEEIQNLIL LGLGVKGEDFKK+ALRYH+IIILTDADVDGAHIRT
Sbjct: 545  KILNIERRDEEAMYKNEEIQNLILALGLGVKGEDFKKDALRYHRIIILTDADVDGAHIRT 604

Query: 783  LLLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQ 604
            LLLTFFFRYQ+ALFDEGCIY GVPPLYKVERGK V+YC+D+AEL+++Q++FP NASY +Q
Sbjct: 605  LLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVYYCFDDAELRKVQSSFPQNASYNMQ 664

Query: 603  RFKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAG 424
            RFKGLGEMMP+QLW+TT+DPE+RLLKQLVVEDAAEA+VVFSSLMG RVD RKELIQK+A 
Sbjct: 665  RFKGLGEMMPAQLWETTMDPEQRLLKQLVVEDAAEASVVFSSLMGTRVDGRKELIQKAAR 724

Query: 423  TIKLEHLDI 397
             I ++HLDI
Sbjct: 725  MINVDHLDI 733


>ref|XP_004967734.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Setaria italica]
          Length = 728

 Score = 1011 bits (2614), Expect = 0.0
 Identities = 516/727 (70%), Positives = 590/727 (81%), Gaps = 3/727 (0%)
 Frame = -3

Query: 2568 LLRPGASPPLQLRFLARRLFSSAAA---QRFRSHSLASFPRPRPCLFSRTGFLVCHSPRN 2398
            LLRP   PP  LR L RRL S+ A     R      ++   PR  LF     +   +PR 
Sbjct: 4    LLRPPPPPP-HLRALLRRLLSTGAGPVPSRMLPSLRSTAAAPR-FLFGPRVVVAGAAPRR 61

Query: 2397 EAGRARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHL 2218
                 RAFM+S+A S+A+QEK     Y +  +QVLE LD VR RPGMYIGSTG RGLHHL
Sbjct: 62   NGVPVRAFMASTAASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGSTGPRGLHHL 121

Query: 2217 VYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILH 2038
            VYEILDNA+DEAQAG+AS+I+VVL +D SVS+TDNGRGIPTD+H  TKKS +ETVLT++H
Sbjct: 122  VYEILDNAVDEAQAGHASKINVVLHDDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMH 181

Query: 2037 AXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCH 1858
            A                        VNALSEALEVTVWRDGKEY+Q YSRGKP+T+L   
Sbjct: 182  AGGKFGGSKSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQSYSRGKPLTTLNSI 241

Query: 1857 SLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGDSK 1678
            +L  E  +RQGT I FWPDK++FTT+I+FDF+TI+ RIRELAFLNPEL ITL  ++G ++
Sbjct: 242  TLSGETSSRQGTRIRFWPDKDIFTTTISFDFNTISSRIRELAFLNPELTITLTKEEGHTE 301

Query: 1677 TQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYA 1498
             Q+NEY YAGGLVEYV WLNTDKKPLHD +A+RKE +GI+VDV+LQWCSD+Y+DT+LGYA
Sbjct: 302  VQHNEYCYAGGLVEYVKWLNTDKKPLHDPIAYRKELDGITVDVSLQWCSDSYSDTVLGYA 361

Query: 1497 NSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNP 1318
            NSIRTIDGGTHI+G+KASLTRTINNL KKSK IK+KDI LSGEHVREG+TC++SVKVP+P
Sbjct: 362  NSIRTIDGGTHIEGLKASLTRTINNLAKKSKTIKDKDITLSGEHVREGMTCVISVKVPSP 421

Query: 1317 EFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRE 1138
            EFEGQTKTRLGNPEVR++VEQ VQE+LTEYLELHPD LD I                 RE
Sbjct: 422  EFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRARE 481

Query: 1137 LVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKI 958
            LVRTKSVLKSSSLPGKLADC++TNPEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKI
Sbjct: 482  LVRTKSVLKSSSLPGKLADCASTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKI 541

Query: 957  LNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLL 778
            LNIERKDEAA+YKNEEIQNLIL LGLGVKGEDFKKEALRYHKI+ILTDADVDGAHIRTLL
Sbjct: 542  LNIERKDEAALYKNEEIQNLILALGLGVKGEDFKKEALRYHKIVILTDADVDGAHIRTLL 601

Query: 777  LTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRF 598
            LTFFFRYQ+ALFDEGCIY GVPPLYKVERGK  HYCYD+A+LK++ NTFPANASY IQRF
Sbjct: 602  LTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKKIVNTFPANASYHIQRF 661

Query: 597  KGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTI 418
            KGLGEMMP+QLW+TT+DPE+RLLKQL VEDAAEANVVFSSLMG RV+YRK+LIQ +A  I
Sbjct: 662  KGLGEMMPAQLWETTMDPERRLLKQLKVEDAAEANVVFSSLMGTRVEYRKQLIQNAASMI 721

Query: 417  KLEHLDI 397
             ++ LDI
Sbjct: 722  NIDQLDI 728


>gb|ESW34084.1| hypothetical protein PHAVU_001G123100g [Phaseolus vulgaris]
          Length = 724

 Score = 1007 bits (2604), Expect = 0.0
 Identities = 517/719 (71%), Positives = 584/719 (81%), Gaps = 2/719 (0%)
 Frame = -3

Query: 2547 PPLQLRFLARRLFS-SAAAQRFRSHSLASFPRPRPCLFSRTGFLVCHSPRNEAGRARAFM 2371
            PPL LRF++ R F+ S+   RF S   ++  + R     R  ++ C  P   A   RAFM
Sbjct: 9    PPL-LRFMSSRFFTCSSFHTRFSSLPPSTLTKTRTSFHLRKIWVPCSVPI--AATPRAFM 65

Query: 2370 SSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAI 2191
            SS   ++A Q+  ++ AYGS+QIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDNA+
Sbjct: 66   SSVPTTEAFQKSESSTAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAV 125

Query: 2190 DEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXXXXXXX 2011
            DEAQAG+ASRIDVVLL D S+SITDNGRGIPTD+H VT KS+LETVLT+LHA        
Sbjct: 126  DEAQAGFASRIDVVLLADDSLSITDNGRGIPTDLHPVTNKSALETVLTVLHAGGKFGGAN 185

Query: 2010 XXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPAEFCTR 1831
                            VNALSE+LE+TVWRDG EY QKYSRGKPVT L C  LP E    
Sbjct: 186  SGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYTQKYSRGKPVTILKCLVLPDEKKDF 245

Query: 1830 QGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGD-SKTQYNEYYY 1654
            +GT + FWPDKEVFTT+I FD++TIAGRIRELAFLNP+L ITL+ +  D  K QYN+Y+Y
Sbjct: 246  RGTRVRFWPDKEVFTTAIQFDYNTIAGRIRELAFLNPKLTITLQKEDNDPDKAQYNKYFY 305

Query: 1653 AGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSIRTIDG 1474
            AGGLVEYV WLN DKK LHD L+FRKET+GI+VD+A QWC DAY+DT+LGYANSIRTIDG
Sbjct: 306  AGGLVEYVKWLNADKKTLHDVLSFRKETDGITVDIAFQWCEDAYSDTILGYANSIRTIDG 365

Query: 1473 GTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFEGQTKT 1294
            GTHI+ MKAS+TRT+N LGKKSK+IK+KDI LSGEHVREGLTC+VSVKVPNPEFEGQTKT
Sbjct: 366  GTHIEAMKASITRTLNGLGKKSKVIKDKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKT 425

Query: 1293 RLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVRTKSVL 1114
            RLGNPEVRKVV+Q + ++LTEYLELHPD LD I                 RELVR KSVL
Sbjct: 426  RLGNPEVRKVVDQSIHDYLTEYLELHPDVLDSILSKSLNAFKAALAAKRARELVRQKSVL 485

Query: 1113 KSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIERKDE 934
            +SSSLPGKLADCS++NPE+ EIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNIER+DE
Sbjct: 486  RSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDE 545

Query: 933  AAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ 754
            AAMYKNEEIQNLILGLGLGVKGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ
Sbjct: 546  AAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ 605

Query: 753  KALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGLGEMMP 574
            KALFDEGCIY GVPPLYKV RGK VHYCYD+A+LK+LQ +FP NASY +QRFKGLGEMMP
Sbjct: 606  KALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKLQRSFPPNASYNMQRFKGLGEMMP 665

Query: 573  SQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLEHLDI 397
             QLW+TT+DP++RLLKQL VEDAAEANVVFSSLMG +VD RKELI+ SA  I L  LDI
Sbjct: 666  LQLWETTMDPKRRLLKQLKVEDAAEANVVFSSLMGTQVDIRKELIRNSASMIDLHQLDI 724


>ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 719

 Score = 1002 bits (2591), Expect = 0.0
 Identities = 501/664 (75%), Positives = 561/664 (84%), Gaps = 1/664 (0%)
 Frame = -3

Query: 2385 ARAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEI 2206
            ++AFMSSSA ++      +++AYGSEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEI
Sbjct: 56   SKAFMSSSAATETSTRSESSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEI 115

Query: 2205 LDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXX 2026
            LDNA+DEAQAG+AS+IDVVL  D SVS+ DNGRGIPTD+H VTKKSSLETVLT+LHA   
Sbjct: 116  LDNAVDEAQAGFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGK 175

Query: 2025 XXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPA 1846
                                 VNALSE+LEV++WRDG E+ QKYSRGKP + LT H   +
Sbjct: 176  FGGSSSGYSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPASILTSHVPSS 235

Query: 1845 EFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGD-SKTQY 1669
            E    QGT I FWPDKEVFTT I FD++TI+GRIRELAFLNP+L ITL  +  D  K QY
Sbjct: 236  ELKNHQGTHIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTITLTKEDNDLEKNQY 295

Query: 1668 NEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSI 1489
            NEY YAGGLVEYV WLN+DK P+H+   FRKET+G+++DVALQWC+DAY+DT+LGYANSI
Sbjct: 296  NEYCYAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSI 355

Query: 1488 RTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFE 1309
            RTIDGGTHIDGMKASLTRT+NNLGKKSKI K+KDI+LSGEHVREGLTC+VSV+V NPEFE
Sbjct: 356  RTIDGGTHIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFE 415

Query: 1308 GQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVR 1129
            GQTKTRLGNPEVRKVVEQ +QE+LTEYLELHPD L+LI                 RELVR
Sbjct: 416  GQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAALAAKRARELVR 475

Query: 1128 TKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNI 949
             KSVL+SSSLPGKLADCS+  PEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNI
Sbjct: 476  QKSVLRSSSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNI 535

Query: 948  ERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTF 769
            ERKDEAAMYKNEEI NLI  LGLG KGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTF
Sbjct: 536  ERKDEAAMYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTF 595

Query: 768  FFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGL 589
            FFRYQKALFDEGCIY GVPPLYKVERGK V+YCYD+ ELK++Q++FP+NASY IQRFKGL
Sbjct: 596  FFRYQKALFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGL 655

Query: 588  GEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLE 409
            GEMMP+QLW+TT+DPE+R+LKQL VEDAAEANVVFSSLMG RVD+RKELIQKSA T+ LE
Sbjct: 656  GEMMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLE 715

Query: 408  HLDI 397
            HLDI
Sbjct: 716  HLDI 719


>ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group]
            gi|75285839|sp|Q5NBJ3.1|GYRB_ORYSJ RecName: Full=DNA
            gyrase subunit B, chloroplastic/mitochondrial; Flags:
            Precursor gi|56783730|dbj|BAD81142.1| putative DNA gyrase
            B subunit [Oryza sativa Japonica Group]
            gi|56783751|dbj|BAD81163.1| putative DNA gyrase B subunit
            [Oryza sativa Japonica Group]
            gi|113532222|dbj|BAF04605.1| Os01g0268300 [Oryza sativa
            Japonica Group]
          Length = 729

 Score = 1002 bits (2590), Expect = 0.0
 Identities = 512/733 (69%), Positives = 585/733 (79%), Gaps = 7/733 (0%)
 Frame = -3

Query: 2574 MALLRPGASPPLQLRFLARRLFSSAAAQRFR------SHSLASFPRPRPCLFSRTGFLVC 2413
            M  L   + PP  LR L RRL S+AA +  R      S S     RPR  + +       
Sbjct: 1    MGPLLRSSPPPRHLRLLLRRLLSTAAGRPSRLLPLPASSSARLLVRPRVAVAAAAA---- 56

Query: 2412 HSPRNEAGRA-RAFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGS 2236
             +P    G A RAFM+S+A S+A+QEK     Y +  +QVLE LD VR RPGMYIGSTGS
Sbjct: 57   GAPLRRNGVAVRAFMASTAASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGSTGS 116

Query: 2235 RGLHHLVYEILDNAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLET 2056
            RGLHHLVYEILDNA+DEAQAGYA+++DV+L  D SVS+TDNGRGIPTD+H  TKKS +ET
Sbjct: 117  RGLHHLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVET 176

Query: 2055 VLTILHAXXXXXXXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPV 1876
            VLT++HA                        VNALSEALEVTVWRDGKEY+Q YSRGK +
Sbjct: 177  VLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAI 236

Query: 1875 TSLTCHSLPAEFCTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRM 1696
            T LT  +L  E  +RQGT I FWPDK +FTT+++FDF+TIAGRIRELAFLNPEL I L  
Sbjct: 237  TMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTK 296

Query: 1695 DKGDSKTQYNEYYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYAD 1516
            ++ D + Q+NEY YAGGLVEYV WLNTDKK LHD +AFRKE +GI+VDV+LQWCSD+Y+D
Sbjct: 297  EEDDLQVQHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSD 356

Query: 1515 TMLGYANSIRTIDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVS 1336
            T+LGYANSIRTIDGGTHIDG+K SLTRTINN  KKSK +K+KDI+LSGEHVREG+TCI++
Sbjct: 357  TVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCIIA 416

Query: 1335 VKVPNPEFEGQTKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXX 1156
            VKVPNPEFEGQTKTRLGNPEVR++VEQ VQE+LTEYLELHPD LD I             
Sbjct: 417  VKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALA 476

Query: 1155 XXXXRELVRTKSVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVL 976
                RELVRTKSVLKSSSLPGKLADC++++PEESEIFIVEGDSAGGSAKQGRDR+FQA+L
Sbjct: 477  AKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAIL 536

Query: 975  PLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGA 796
            PLRGKILNIER+DEAA+YKNEEIQNLI+ LGLGVKGEDF KEALRYHKI+ILTDADVDGA
Sbjct: 537  PLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDGA 596

Query: 795  HIRTLLLTFFFRYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANAS 616
            HIRTLLLTFFFRYQKALFDEGCIY GVPPLYKVERGK  HYCYD+A+LK+L NTFP NAS
Sbjct: 597  HIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNAS 656

Query: 615  YGIQRFKGLGEMMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQ 436
            Y IQRFKGLGEMMP+QLW+TT+DPE+R+LKQL VEDAAEANVVFSSLMG RVD RK+LIQ
Sbjct: 657  YHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLIQ 716

Query: 435  KSAGTIKLEHLDI 397
             +A  + LEHLDI
Sbjct: 717  NAASMVNLEHLDI 729


>ref|XP_004493400.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Cicer arietinum]
          Length = 732

 Score = 1001 bits (2588), Expect = 0.0
 Identities = 518/722 (71%), Positives = 585/722 (81%), Gaps = 9/722 (1%)
 Frame = -3

Query: 2535 LRFLARRLFSSAAAQRFRS--HSLASFPRPRPCL------FSRTGFLVCHSPRNEAGRAR 2380
            LR +A R F + ++ R  S  HS +S P     L      FS T F V     N A   R
Sbjct: 12   LRIMASRNFFTPSSFRLLSYPHSSSSSPSSFSTLSKTRKRFSLTKFSVPSLVPN-AVTPR 70

Query: 2379 AFMSSSALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILD 2200
            A+MSS + ++  Q+  +++AYGS+QIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILD
Sbjct: 71   AYMSSISAAEDFQKNESSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILD 130

Query: 2199 NAIDEAQAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXXXX 2020
            NA+DEAQAG+AS+IDVVL  D SVSITDNGRGIPTD+H VTKKS+LETVLTILHA     
Sbjct: 131  NAVDEAQAGFASKIDVVLHADDSVSITDNGRGIPTDMHPVTKKSALETVLTILHAGGKFG 190

Query: 2019 XXXXXXXXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPAEF 1840
                               VNALSEALEVTVWRDG EY Q YSRGKPVT+L C  LP E 
Sbjct: 191  GINSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGLEYTQTYSRGKPVTTLNCVMLPFEN 250

Query: 1839 CTRQGTCITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGD-SKTQYNE 1663
              RQGT I FWPDKEVFTT+I F+++TIAGRIRELAFLNP+L I LR +  D  K   NE
Sbjct: 251  KDRQGTQIKFWPDKEVFTTAIQFEYNTIAGRIRELAFLNPKLTIALRKEDNDPEKNLSNE 310

Query: 1662 YYYAGGLVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSIRT 1483
            Y+YAGGL EYV WLNTDKK +HD L+FRKE +GI+VD+ALQWC DAY+DT+LGYANSIRT
Sbjct: 311  YFYAGGLAEYVKWLNTDKKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTILGYANSIRT 370

Query: 1482 IDGGTHIDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFEGQ 1303
            +DGGTHIDGMKASLTRT+N+LGKKSK+IKEKDI LSGEHVREGLTC+VSVKVPNPEFEGQ
Sbjct: 371  VDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQ 430

Query: 1302 TKTRLGNPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVRTK 1123
            TKTRLGNPEVRKVV+Q +QE+LTEYLELHPD LD +                 RELVR K
Sbjct: 431  TKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARELVRQK 490

Query: 1122 SVLKSSSLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIER 943
            SVL+SSSLPGKLADCS++NPE+ EIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNIER
Sbjct: 491  SVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 550

Query: 942  KDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFF 763
            +DEAAMYKNEEIQNLILGLGLGVKGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFF+
Sbjct: 551  RDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFY 610

Query: 762  RYQKALFDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGLGE 583
            RYQ+ALFDEGCIY GVPPLYKV RGK VHYCYDEA+LK+L++TF  NASY +QRFKGLGE
Sbjct: 611  RYQRALFDEGCIYVGVPPLYKVVRGKQVHYCYDEADLKKLKSTFAPNASYNMQRFKGLGE 670

Query: 582  MMPSQLWDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLEHL 403
            MMP QLW+TT+DP++RLLKQL VEDAAE N+VFSSLMG+RVD RKELI+ +A  I ++ L
Sbjct: 671  MMPLQLWETTMDPDRRLLKQLTVEDAAEVNIVFSSLMGSRVDVRKELIRNAANMIDIDRL 730

Query: 402  DI 397
            DI
Sbjct: 731  DI 732


>ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 719

 Score = 1001 bits (2588), Expect = 0.0
 Identities = 516/716 (72%), Positives = 582/716 (81%), Gaps = 1/716 (0%)
 Frame = -3

Query: 2541 LQLRFLARRLFSSAAAQRFRSHSLASFPRPRPCLFSRTGFLVCHSPRNEAGRARAFMSSS 2362
            + LRFL+    S++ A RF    L+   R R    S +  LV   P  E   ++AFMSSS
Sbjct: 12   IHLRFLSS---SASVAPRFSFLQLSG-ARFRTMKISTSIRLV---PNAEVS-SKAFMSSS 63

Query: 2361 ALSDAVQEKSNTQAYGSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEA 2182
            A ++      +++AYGSEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDNA+DEA
Sbjct: 64   AATETSTGSESSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEA 123

Query: 2181 QAGYASRIDVVLLEDGSVSITDNGRGIPTDVHHVTKKSSLETVLTILHAXXXXXXXXXXX 2002
            QAG+AS+IDVVL  D SVS+ DNGRGIPTD+H VTKKSSLETVLT+LHA           
Sbjct: 124  QAGFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGSSSGY 183

Query: 2001 XXXXXXXXXXXXXVNALSEALEVTVWRDGKEYKQKYSRGKPVTSLTCHSLPAEFCTRQGT 1822
                         VNALSE+LEV++WRDG E+ QKYSRGKP + LT H   +E    QGT
Sbjct: 184  SVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPTSILTSHVPSSELKNHQGT 243

Query: 1821 CITFWPDKEVFTTSINFDFDTIAGRIRELAFLNPELRITLRMDKGD-SKTQYNEYYYAGG 1645
             I FWPDKEVFTT I FD++TI+GRIRELAFLNP+L I L  +  D  K QYNEY YAGG
Sbjct: 244  HIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTIALTKEDNDLEKNQYNEYCYAGG 303

Query: 1644 LVEYVNWLNTDKKPLHDTLAFRKETEGISVDVALQWCSDAYADTMLGYANSIRTIDGGTH 1465
            LVEYV WLN+DK P+H+   FRKET+G+++DVALQWC+DAY+DT+LGYANSIRTIDGGTH
Sbjct: 304  LVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSIRTIDGGTH 363

Query: 1464 IDGMKASLTRTINNLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLG 1285
            IDGMKASLTRT+NNLGKKSKI K+KDI+LSGEHVREGLTC+VSV+V NPEFEGQTKTRLG
Sbjct: 364  IDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFEGQTKTRLG 423

Query: 1284 NPEVRKVVEQCVQEHLTEYLELHPDTLDLIXXXXXXXXXXXXXXXXXRELVRTKSVLKSS 1105
            NPEVRKVVEQ +QE+LTEYLELHPD L+LI                 RELVR KSVL+SS
Sbjct: 424  NPEVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAALAAKRARELVRQKSVLRSS 483

Query: 1104 SLPGKLADCSATNPEESEIFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNIERKDEAAM 925
            SLPGKLADCS+  PEESEIFIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNIERKDEAAM
Sbjct: 484  SLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAM 543

Query: 924  YKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKAL 745
            YKNEEI NLI  LGLG KGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKAL
Sbjct: 544  YKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKAL 603

Query: 744  FDEGCIYAGVPPLYKVERGKHVHYCYDEAELKQLQNTFPANASYGIQRFKGLGEMMPSQL 565
            FDEGCIY GVPPLYKVERGK V+YCYD+ ELK++Q++FP+NASY IQRFKGLGEMMP+QL
Sbjct: 604  FDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQL 663

Query: 564  WDTTLDPEKRLLKQLVVEDAAEANVVFSSLMGARVDYRKELIQKSAGTIKLEHLDI 397
            W+TT+DPE+R+LKQL VEDAAEANVVFSSLMG RVD+RKELIQKSA T+ LEHLDI
Sbjct: 664  WETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLEHLDI 719