BLASTX nr result

ID: Sinomenium22_contig00060006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00060006
         (333 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_009074735.1| conserved hypothetical protein [Streptomyces...    82   8e-14
ref|WP_003038304.1| hypothetical protein [Streptococcus anginosu...    62   6e-08
ref|WP_003946934.1| conserved hypothetical protein, partial [Str...    60   2e-07
ref|NP_738153.1| hypothetical protein CE1543 [Corynebacterium ef...    45   2e-06

>ref|WP_009074735.1| conserved hypothetical protein [Streptomyces sp. AA4]
           gi|302434208|gb|EFL06024.1| conserved hypothetical
           protein [Streptomyces sp. AA4]
          Length = 195

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 51/99 (51%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
 Frame = +3

Query: 33  LCRFGVRVA*ELARGFSRQHGITLLRLKRLCVTSQPVGVRICLYTGLHACTSTTTHWRSY 212
           +C FGVR    L RGFSRQH IT           +    RICL   LHA T TT  WRSY
Sbjct: 1   MCWFGVRAVHALTRGFSRQHRITHFASHGYASRLRVCEQRICLLFLLHAYTRTTIAWRSY 60

Query: 213 PPASPHRLATTRQGPALPT-SVPEG-TGWFGRLAHLDSP 323
            PASPHRL TT  GP L T   PEG T  FG L    SP
Sbjct: 61  LPASPHRLTTTESGPTLHTPDPPEGFTSGFGWLVSTASP 99


>ref|WP_003038304.1| hypothetical protein [Streptococcus anginosus]
           gi|383341230|gb|EID19495.1| hypothetical protein
           HMPREF1043_0707 [Streptococcus anginosus subsp. whileyi
           CCUG 39159]
          Length = 191

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 44/107 (41%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
 Frame = +1

Query: 1   LERLSILYLTTCVGLGYGSRRNSLEAFLGSMGSLCFASNGYASRLSLLGYGFACTPAYTL 180
           L+RLSILYLTTCVGLGYG      +AFLGS+GS      G  S L     GF     YTL
Sbjct: 47  LDRLSILYLTTCVGLGYGQFEPHADAFLGSIGSPDHPPCGRPSGLRHTAGGFTYRQPYTL 106

Query: 181 AP------------VQPLTGGATLLRHPIAWLLPGRVPRSPHPFPKE 285
            P            V P+   A+          P +VPRSP P P +
Sbjct: 107 RPGHFHCPARLPSCVTPVNALAS----------PVQVPRSPSPTPSK 143


>ref|WP_003946934.1| conserved hypothetical protein, partial [Streptomyces albus]
           gi|291353151|gb|EFE80053.1| LOW QUALITY PROTEIN:
           conserved hypothetical protein [Streptomyces albus
           J1074]
          Length = 104

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 45/107 (42%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
 Frame = +3

Query: 3   RTPQYSLPDHLCRFGVRVA*ELARGFSRQHGITLLRLKRLCVTSQPVGVRICLYTGLHAC 182
           RTP+YSLPDHL RF VR A +LARGFSRQH     R+          G+   +Y G    
Sbjct: 3   RTPRYSLPDHLSRFRVRAAMKLARGFSRQH-----RIIHFTTIGSASGLS-HMYDGFTYR 56

Query: 183 TSTT------THWRSYPPASPHRLATTRQGPAL-PTSVPEGTGWFGR 302
           T+ T           Y PASPH   TT  G  L     PEG+G   R
Sbjct: 57  TAYTLTPGQPPPGMDYLPASPHHSPTTSSGHRLHHFPFPEGSGTASR 103


>ref|NP_738153.1| hypothetical protein CE1543 [Corynebacterium efficiens YS-314]
           gi|499388034|ref|WP_011075501.1| hypothetical protein
           [Corynebacterium efficiens] gi|23493383|dbj|BAC18353.1|
           conserved hypothetical protein [Corynebacterium
           efficiens YS-314]
          Length = 261

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4   ERLSILYLTTCVGLGYGSRRNSLEAFLGSMGSLCFA---SNGYASRLSLLGYGFACTPAY 174
           ERLSILYLTTCVGLGYG   +    F        F    +  +AS  +++ YGF  T  +
Sbjct: 120 ERLSILYLTTCVGLGYGPNMHIARGFSRQYRITEFTPLRATHHAS--NIMRYGFTNTSFH 177

Query: 175 TLAP 186
           TL P
Sbjct: 178 TLTP 181



 Score = 32.7 bits (73), Expect(2) = 2e-06
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +2

Query: 209 LPSCVTPSLGYYQAGSRAPH 268
           LP CVTPSL YYQ  S A H
Sbjct: 189 LPHCVTPSLSYYQIRSHARH 208


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