BLASTX nr result

ID: Sinomenium22_contig00059365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00059365
         (379 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   144   1e-32
emb|CAN80310.1| hypothetical protein VITISV_043561 [Vitis vinifera]   136   3e-30
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]   129   3e-28
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   129   3e-28
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   129   3e-28
ref|XP_004142477.1| PREDICTED: uncharacterized mitochondrial pro...   129   4e-28
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]   129   4e-28
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  128   7e-28
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]   128   7e-28
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]   128   7e-28
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]   128   7e-28
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              127   1e-27
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   127   1e-27
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]   127   2e-27
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   126   4e-27
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   126   4e-27
gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subc...   125   6e-27
emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]   125   6e-27
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]        125   6e-27
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   124   1e-26

>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  144 bits (363), Expect = 1e-32
 Identities = 71/128 (55%), Positives = 97/128 (75%), Gaps = 3/128 (2%)
 Frame = +3

Query: 3   STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
           S+S ++  LISSLN  FA+KDL PLN+FLG+ +  S + +HL+Q+KYI D L RA +S+S
Sbjct: 16  SSSLLIEQLISSLNSCFALKDLSPLNFFLGIEVLNSRSSLHLSQAKYICDFLQRAGLSES 75

Query: 183 KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP-- 356
           K M +PMA+G  LS+ DG+ ++DPTL+RS+VGAL YCTITRP+I++ VNK  QFMH+P  
Sbjct: 76  KSMASPMAAGPVLSIADGTRLEDPTLYRSLVGALQYCTITRPDIAYTVNKLCQFMHAPTS 135

Query: 357 -HLLMASR 377
            HL +  R
Sbjct: 136 THLQVVKR 143


>emb|CAN80310.1| hypothetical protein VITISV_043561 [Vitis vinifera]
          Length = 291

 Score =  136 bits (343), Expect = 3e-30
 Identities = 67/116 (57%), Positives = 88/116 (75%)
 Frame = +3

Query: 9   SSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDSKP 188
           S  ++ L+ SL   FAIKDL  L+YFL + +  S +G+HL+Q KYI DLL    M+DSK 
Sbjct: 129 SESISQLVLSLGHHFAIKDLRLLHYFLVIKVHRSTSGLHLSQHKYITDLLACTSMTDSKS 188

Query: 189 MQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
           + +PMASG+ALS++DG+P++D T +RS+VGAL YCT+TRPNISF VNK  QFMHSP
Sbjct: 189 VHSPMASGYALSIHDGTPLEDGTTYRSVVGALQYCTLTRPNISFVVNKVCQFMHSP 244


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score =  129 bits (325), Expect = 3e-28
 Identities = 61/117 (52%), Positives = 86/117 (73%)
 Frame = +3

Query: 6    TSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDSK 185
            +S+ ++ LI+ L+  FA++DL  L+YFLG+ ++Y    ++L+Q+KY+ DLLHR  M D+K
Sbjct: 959  SSTQISSLIAKLDSIFALRDLXQLSYFLGIEVSYHEGSMNLSQTKYVSDLLHRTEMFDTK 1018

Query: 186  PMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            P +TP A G  LS +DG PMD+ T +RS+VGAL Y TITRP+I+FAVNK  QFM  P
Sbjct: 1019 PAKTPGAVGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKTCQFMQQP 1075


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  129 bits (325), Expect = 3e-28
 Identities = 61/118 (51%), Positives = 86/118 (72%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            S+S+ ++ LI+ L+  FA++DLG L++FLG+ ++Y+   + L+Q+KYI DLLHR  + D+
Sbjct: 1090 SSSTQISSLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDT 1149

Query: 183  KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            KP  TP A G  LS +DG PM D T +RS+VGAL Y T+TRP+I+FAVNK  QFM  P
Sbjct: 1150 KPANTPGAVGKNLSKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQP 1207


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  129 bits (325), Expect = 3e-28
 Identities = 63/118 (53%), Positives = 83/118 (70%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            S+  ++  LI  L+  FA++DLG L+YFLG+ +TY    +HL+QSKYI DLL R  M DS
Sbjct: 1033 SSPVLIQQLIHKLHSLFALRDLGQLSYFLGIEVTYDGGSMHLSQSKYITDLLQRTSMLDS 1092

Query: 183  KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            K   TP   G +LS +DG  MDD T++RS+VGAL Y T+TRP+I+F+VNK  QFMH P
Sbjct: 1093 KAAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSVNKACQFMHRP 1150


>ref|XP_004142477.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Cucumis sativus]
          Length = 203

 Score =  129 bits (324), Expect = 4e-28
 Identities = 66/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITY-SPNGIHLNQSKYIKDLLHRAVMSD 179
           S+S  + +LI SLN  FA+KDLG L+YFLG+ ++Y    G+ L+QSKYI DLLH+  M++
Sbjct: 49  SSSIALDELIKSLNSTFALKDLGKLSYFLGIEVSYPEKGGMFLSQSKYILDLLHQTKMAE 108

Query: 180 SKPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSPH 359
           ++P+ TPM SG  LS   G    DP L+RS+VGAL Y T T P ISF+VNK YQFM SP 
Sbjct: 109 AQPIATPMISGPILSACQGELFYDPYLYRSVVGALQYATFTHPEISFSVNKAYQFMRSPT 168

Query: 360 LL 365
           +L
Sbjct: 169 IL 170


>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
          Length = 1635

 Score =  129 bits (324), Expect = 4e-28
 Identities = 60/117 (51%), Positives = 84/117 (71%)
 Frame = +3

Query: 6    TSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDSK 185
            +S+ ++ LI  L+  F ++DLG L+YFLG+ ++Y    ++L+Q+KY+ DLLHR  M D+K
Sbjct: 885  SSTQISSLIXKLDSIFTLRDLGQLSYFLGIEVSYHEGSMNLSQTKYVSDLLHRTEMFDTK 944

Query: 186  PMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            P +TP   G  LS +DG PMD+ T +RS+VGAL Y TITRP+I+FAVNK  QFM  P
Sbjct: 945  PAKTPGVVGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKACQFMQQP 1001


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  128 bits (322), Expect = 7e-28
 Identities = 64/120 (53%), Positives = 85/120 (70%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            ST      L+  LNK FA+KDLG L+YFLG+ +T  PNGI L Q KY  DLL R  MS+ 
Sbjct: 1130 STEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNC 1189

Query: 183  KPMQTPMASGHALSLYDGSPM--DDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            KP+ TP++    L+LY+GSP+  +D T +RSIVGAL Y T+TRP+I+++VNK  QF+H+P
Sbjct: 1190 KPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 1249


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score =  128 bits (322), Expect = 7e-28
 Identities = 60/117 (51%), Positives = 85/117 (72%)
 Frame = +3

Query: 6    TSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDSK 185
            +S+ ++ LI+ L+  F ++DLG L+YFLG+ + Y    ++L+Q+KY+ DLLHR  M D+K
Sbjct: 1847 SSTQISSLIAKLDSIFTLRDLGQLSYFLGIEVFYHEGSMNLSQTKYVSDLLHRTEMFDTK 1906

Query: 186  PMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            P +TP A G  LS +DG PM++ T +RS+VGAL Y TITRP+I+FAVNK  QFM  P
Sbjct: 1907 PAKTPGAVGKNLSKFDGDPMNEVTQYRSVVGALQYSTITRPDIAFAVNKACQFMQQP 1963


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/106 (57%), Positives = 84/106 (79%)
 Frame = +3

Query: 39   LNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDSKPMQTPMASGHA 218
            LN   + +DLGPLN+FLG+ +  S + +HL+Q+KYI DLL RA +S+SK M +PMA+G  
Sbjct: 872  LNGDLSEQDLGPLNFFLGIEVLNSGSSLHLSQAKYICDLLQRAGLSESKSMASPMAAGPV 931

Query: 219  LSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            LS+ DG+ ++DPTL+RS+VGAL YCTITRP+I++ VNK  QFMH+P
Sbjct: 932  LSIADGTRLEDPTLYRSLVGALQYCTITRPDIAYTVNKLCQFMHAP 977


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score =  128 bits (322), Expect = 7e-28
 Identities = 60/117 (51%), Positives = 85/117 (72%)
 Frame = +3

Query: 6    TSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDSK 185
            +S+ ++ LI+ L+  F ++DLG L+YFL + ++Y    ++L+Q+KY+ DLLHR  M D+K
Sbjct: 928  SSTQISSLIAKLDSIFTLRDLGHLSYFLSIEVSYHEGSMNLSQTKYVSDLLHRIEMFDTK 987

Query: 186  PMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            P +TP A G  LS +DG PMD+ T +RS+VGAL Y TITRP+I+FAVNK  QFM  P
Sbjct: 988  PAKTPGAVGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKACQFMQQP 1044


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  127 bits (320), Expect = 1e-27
 Identities = 61/118 (51%), Positives = 86/118 (72%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            + SS ++ LI +LN  F++KDLG ++YFLG+   Y+ + +HL Q KYI DLL +  + DS
Sbjct: 1076 NNSSHISHLIHNLNSLFSMKDLGSVHYFLGIETVYNGDHLHLTQHKYIVDLLKKTKLHDS 1135

Query: 183  KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            +P  TP+ SG  LS+YDG  ++DP+ +RSIVGAL Y T+TRP+I +AVN+  QFMHSP
Sbjct: 1136 RPYPTPVLSGKKLSVYDGVKLEDPSEYRSIVGALQYLTLTRPDICYAVNQVCQFMHSP 1193


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  127 bits (320), Expect = 1e-27
 Identities = 61/118 (51%), Positives = 82/118 (69%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            S+  ++  LI  L+  FA++DLG L+YFLG+ +TY    +HL+Q KYI DLL R  M DS
Sbjct: 1070 SSPILIQQLIHKLHSLFALRDLGQLSYFLGIEVTYDGGSLHLSQRKYITDLLQRTSMLDS 1129

Query: 183  KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            K   TP   G +LS +DG  MDD T++RS+VGAL Y T+TRP+I+F++NK  QFMH P
Sbjct: 1130 KAAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSINKACQFMHRP 1187


>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
          Length = 1319

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/117 (50%), Positives = 85/117 (72%)
 Frame = +3

Query: 6    TSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDSK 185
            +S+ ++ LI+ L+  F ++DLG L+YFLG+ ++Y    ++L+Q+KY+ D+LHR  M D+K
Sbjct: 1023 SSTQISSLIAKLDSIFTLRDLGQLSYFLGIEVSYHEGSMNLSQTKYVSDMLHRTEMFDTK 1082

Query: 186  PMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            P +TP A G  LS +DG PMD+ T +RS+VGAL Y TITR +I+FAVNK  QFM  P
Sbjct: 1083 PAKTPGAVGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRLDIAFAVNKACQFMQQP 1139


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  126 bits (316), Expect = 4e-27
 Identities = 64/118 (54%), Positives = 80/118 (67%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            S+S+ V+  I+ LN +FA++DLG +NYFLG+ +  S    HL+Q KY +DLL R  M DS
Sbjct: 1056 SSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDS 1115

Query: 183  KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            KP  TP   G  LS  DG P  D TL+RS VGAL Y T+TRP+ISFAVNK  QFM +P
Sbjct: 1116 KPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATP 1173


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  126 bits (316), Expect = 4e-27
 Identities = 64/118 (54%), Positives = 80/118 (67%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            S+S+ V+  I+ LN +FA++DLG +NYFLG+ +  S    HL+Q KY +DLL R  M DS
Sbjct: 914  SSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDS 973

Query: 183  KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            KP  TP   G  LS  DG P  D TL+RS VGAL Y T+TRP+ISFAVNK  QFM +P
Sbjct: 974  KPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATP 1031


>gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 825

 Score =  125 bits (314), Expect = 6e-27
 Identities = 63/120 (52%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
           ST      L+  LNK FA+KDLG L+YFLG+ +T   NGI L Q KY  DLL R  MS+ 
Sbjct: 620 STEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGILLTQEKYANDLLKRVNMSNC 679

Query: 183 KPMQTPMASGHALSLYDGSPM--DDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
           KP+ TP++    L+LY+GSP+  +D T +RSIVGAL Y T+TRP+I+++VNK  QF+H+P
Sbjct: 680 KPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 739


>emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]
          Length = 864

 Score =  125 bits (314), Expect = 6e-27
 Identities = 64/118 (54%), Positives = 85/118 (72%)
 Frame = +3

Query: 3   STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
           S S+ V  LI  L+  F++K+LG L+YFLG+ +  +P GIHLNQ+KYI DLL +A M D+
Sbjct: 523 SYSTQVTHLIQQLHHQFSLKNLGLLHYFLGLEVHRTPIGIHLNQAKYIIDLLTQATMLDA 582

Query: 183 KPMQTPMASGHALSLYDGSPMDDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
           KP  TPM+S   LS +DG  +++ + +RS VGAL YCT+TRP+I FAVNK  QFMH P
Sbjct: 583 KPCPTPMSSNTNLSFHDGVVLENGSDYRSFVGALQYCTMTRPDIDFAVNKVCQFMHHP 640


>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
          Length = 950

 Score =  125 bits (314), Expect = 6e-27
 Identities = 63/120 (52%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
           ST      L+  LNK FA+KDLG L+YFLG+ +T   NGI L Q KY  DLL R  MS+ 
Sbjct: 207 STEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGIILTQEKYANDLLKRVNMSNC 266

Query: 183 KPMQTPMASGHALSLYDGSPM--DDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
           KP+ TP++    L+LY+GSP+  +D T +RSIVGAL Y T+TRP+I+++VNK  QF+H+P
Sbjct: 267 KPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 326


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  124 bits (311), Expect = 1e-26
 Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3    STSSMVADLISSLNKAFAIKDLGPLNYFLGVGITYSPNGIHLNQSKYIKDLLHRAVMSDS 182
            ST      L+S LNK FA+KDLG LNYFLG+ +    +GI L Q KY  DLL +  MSD 
Sbjct: 1007 STHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDC 1066

Query: 183  KPMQTPMASGHALSLYDGSPM--DDPTLFRSIVGAL*YCTITRPNISFAVNKGYQFMHSP 356
            KP+ TP+++   LS+++GSP+   D T +RSIVGAL Y T+TRP+I+F+VNK  QF+H+P
Sbjct: 1067 KPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAP 1126

Query: 357  HLL 365
              L
Sbjct: 1127 TTL 1129


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