BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00058807
         (426 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   129   4e-42
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   128   7e-41
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   110   1e-33
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   117   3e-33
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   117   4e-33
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         116   1e-32
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   116   1e-32
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   115   2e-32
gb|ABW74566.1| integrase [Boechera divaricarpa]                       110   4e-32
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       111   6e-32
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         115   1e-31
ref|XP_007028892.1| Uncharacterized protein TCM_024822 [Theobrom...    94   2e-31
gb|AAT38797.2| Polyprotein, putative [Solanum demissum]                95   3e-29
gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]       102   5e-29
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              107   8e-29
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...    98   1e-28
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...    98   1e-28
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...    98   1e-28
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...    98   1e-28
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   100   2e-28

>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score =  129 bits (325), Expect(2) = 4e-42
 Identities = 61/97 (62%), Positives = 76/97 (78%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLKEHGIRHQL 308
           +KTW+Y LKE S  ++ FK F +M ENES   +K+LRSDRGGE I   DFLKE+GI+HQ 
Sbjct: 529 RKTWIYLLKEKSATFECFKTFKAMVENESNLKLKSLRSDRGGEYIVFADFLKENGIKHQK 588

Query: 309 TVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFW 419
           T+  TPQQNGVAERKNR +MELARSMLKA+++ + FW
Sbjct: 589 TLRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFW 625



 Score = 67.8 bits (164), Expect(2) = 4e-42
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F     WRAS+ LELV TDLCGPM+T + GGN YFLTFIDDYS+K
Sbjct: 486 FPTGGSWRASKPLELVHTDLCGPMRTTTHGGNRYFLTFIDDYSRK 530


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  128 bits (321), Expect(2) = 7e-41
 Identities = 61/97 (62%), Positives = 72/97 (74%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLKEHGIRHQL 308
           +K W+YFLKE SE    FK+F +  EN+SGY IKTLRSDRGGE I   +F KE GI HQ+
Sbjct: 520 RKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQM 579

Query: 309 TVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFW 419
           T   T QQNGVAERKNR +ME+ARSMLKA+ + N FW
Sbjct: 580 TARMTTQQNGVAERKNRTIMEMARSMLKAKNLPNEFW 616



 Score = 65.1 bits (157), Expect(2) = 7e-41
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F     WRAS+ LEL+ TDLCGPM+T + GGN YF+TFIDD+S+K
Sbjct: 477 FPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRK 521


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  110 bits (275), Expect(2) = 1e-33
 Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
 Frame = +3

Query: 135 TWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRHQL 308
           +WVYFLK  SE ++ FK F +  EN+SG  IK+LR+DRGGE ++     F +E+GIR +L
Sbjct: 536 SWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRREL 595

Query: 309 TVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
           T  YTP+QNGVAERKNR V+E+ARS LKA+ + + FW +
Sbjct: 596 TAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGE 634



 Score = 58.5 bits (140), Expect(2) = 1e-33
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = +1

Query: 19  WRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           WRA+ CLELV  DLCGPM+  S GG+ YFL F DDYS+
Sbjct: 497 WRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSR 534


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  117 bits (294), Expect(2) = 3e-33
 Identities = 61/102 (59%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLK---EHGIR 299
           +KTWVYFLKE SEV++ FK F +  E ESG  IKT+RSDRGGE  +  +FLK   ++GIR
Sbjct: 558 RKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS-KEFLKYCEDNGIR 616

Query: 300 HQLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
            QLTV  +PQQNGVAERKNR ++E+ARSMLK++R+    WA+
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658



 Score = 50.1 bits (118), Expect(2) = 3e-33
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F  ++  RA + LEL+ TD+CGP++  S G + YFL FIDD+S+K
Sbjct: 515 FPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  117 bits (294), Expect(2) = 4e-33
 Identities = 61/102 (59%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLK---EHGIR 299
           +KTWVYFLKE SEV++ FK F +  E ESG  IKT+RSDRGGE  +  +FLK   ++GIR
Sbjct: 558 RKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS-KEFLKYCEDNGIR 616

Query: 300 HQLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
            QLTV  +PQQNGVAERKNR ++E+ARSMLK++R+    WA+
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658



 Score = 49.3 bits (116), Expect(2) = 4e-33
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F  ++  RA + LEL+ TD+CGP++  S G + YFL FIDD+S+K
Sbjct: 515 FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  116 bits (290), Expect(2) = 1e-32
 Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 3/102 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLK---EHGIR 299
           +KTWVYFLKE SEV++ FK F +  E ESG  IKT+RSDRGGE  +  +FLK   ++GIR
Sbjct: 558 RKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS-KEFLKYCEDNGIR 616

Query: 300 HQLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
            QLTV  +PQQNGV ERKNR ++E+ARSMLK++R+    WA+
Sbjct: 617 RQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAE 658



 Score = 49.3 bits (116), Expect(2) = 1e-32
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F  ++  RA + LEL+ TD+CGP++  S G + YFL FIDD+S+K
Sbjct: 515 FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  116 bits (290), Expect(2) = 1e-32
 Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 3/102 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLK---EHGIR 299
           +KTWVYFLKE SEV++ FK F +  E ESG  IKT+RSDRGGE  +  +FLK   ++GIR
Sbjct: 558 RKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS-KEFLKYCEDNGIR 616

Query: 300 HQLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
            QLTV  +PQQNGV ERKNR ++E+ARSMLK++R+    WA+
Sbjct: 617 RQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAE 658



 Score = 49.3 bits (116), Expect(2) = 1e-32
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F  ++  RA + LEL+ TD+CGP++  S G + YFL FIDD+S+K
Sbjct: 515 FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  115 bits (288), Expect(2) = 2e-32
 Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 3/102 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLK---EHGIR 299
           +KTWVYFLKE SEV++ FK F +  E ESG  IKT+RSD GGE  +  +FLK   ++GIR
Sbjct: 558 RKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTS-KEFLKYCEDNGIR 616

Query: 300 HQLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
            QLTV  +PQQNGVAERKNR ++E+ARSMLK++R+    WA+
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658



 Score = 49.3 bits (116), Expect(2) = 2e-32
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F  ++  RA + LEL+ TD+CGP++  S G + YFL FIDD+S+K
Sbjct: 515 FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  110 bits (275), Expect(2) = 4e-32
 Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
 Frame = +3

Query: 135 TWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRHQL 308
           +WVYFLK   E +  FKNF ++ E +S   +K LR+DRGGE  +     F ++ GI H+L
Sbjct: 372 SWVYFLKSKGEAFDMFKNFKALVEKQSEQQVKVLRTDRGGEFTSTKFNQFCEKEGIHHEL 431

Query: 309 TVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
           T  YTP+QNGVAERKN  V+E+ARSMLK R + N FWA+
Sbjct: 432 TTAYTPEQNGVAERKNTTVVEMARSMLKERNLPNQFWAE 470



 Score = 53.5 bits (127), Expect(2) = 4e-32
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = +1

Query: 22  RASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           RA++ LE+V  DLCGPMQTAS GG+ YFL   DDYS+
Sbjct: 334 RATQYLEIVHADLCGPMQTASLGGSKYFLMLTDDYSR 370


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  111 bits (277), Expect(2) = 6e-32
 Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALT--DFLKEHGIRH 302
           +KTWVYFLKE SE ++ FK F  M E  +   IK +RSDRGGE  + T  ++ +E GIR 
Sbjct: 579 RKTWVYFLKEKSEAFEVFKKFKVMVERTTDKQIKAVRSDRGGEYTSTTFMEYCEEQGIRR 638

Query: 303 QLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
            LT  YTPQQNGVAERKNR ++++ RSMLK++++   FWA+
Sbjct: 639 FLTAPYTPQQNGVAERKNRTILDMVRSMLKSKKMPKEFWAE 679



 Score = 52.0 bits (123), Expect(2) = 6e-32
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           F  K  + A + LEL+ TD+CGP+   SF G  YF+TFIDD+S+K
Sbjct: 536 FPKKAQYWAKQPLELIHTDICGPITPESFSGKRYFITFIDDFSRK 580


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  115 bits (288), Expect(2) = 1e-31
 Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 3/102 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIALTDFLK---EHGIR 299
           +KTWVYFLKE SEV++ FK F +  E ESG  IKT+RSD GGE  +  +FLK   ++GIR
Sbjct: 55  RKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTS-KEFLKYCEDNGIR 113

Query: 300 HQLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
            QLTV  +PQQNGVAERKNR ++E+ARSMLK++R+    WA+
Sbjct: 114 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 155



 Score = 46.6 bits (109), Expect(2) = 1e-31
 Identities = 18/39 (46%), Positives = 31/39 (79%)
 Frame = +1

Query: 19  WRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           +++++ +EL+ TD+CGP++  S G + YFL FIDD+S+K
Sbjct: 18  FKSTKTVELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 56


>ref|XP_007028892.1| Uncharacterized protein TCM_024822 [Theobroma cacao]
           gi|508717497|gb|EOY09394.1| Uncharacterized protein
           TCM_024822 [Theobroma cacao]
          Length = 431

 Score = 94.0 bits (232), Expect(2) = 2e-31
 Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRH 302
           QK WV+FLK   E +  FK F +  EN+SG +I  L +DRGGE ++    +F +E GIR 
Sbjct: 184 QKIWVFFLKFKFETFDNFKKFKTEVENQSGCNINVLSTDRGGEFVSNEFNNFCEEQGIRR 243

Query: 303 QLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
           +L+  YTP+QNG A+RKNR ++E+A S+L A+ + N F A+
Sbjct: 244 ELSAPYTPKQNGAAKRKNRTIVEMATSLLVAKGLPNQFRAE 284



 Score = 67.8 bits (164), Expect(2) = 2e-31
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +1

Query: 19  WRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           WRAS CLELV  DLCGPM T SFGG+ YFL FIDDYS+K
Sbjct: 147 WRASNCLELVHVDLCGPMDTESFGGSKYFLLFIDDYSQK 185


>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
          Length = 1793

 Score = 94.7 bits (234), Expect(2) = 3e-29
 Identities = 50/98 (51%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 WVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGE--CIALTDFLKEHGIRHQLT 311
           WVYF++  SEV+  FK F ++ EN+    IK LRSD GGE       +F     I  QLT
Sbjct: 662 WVYFIRLKSEVFDVFKQFKALVENQCNLRIKALRSDNGGEHTSFQFVEFCNSTCIECQLT 721

Query: 312 VCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
           + YTPQQNGV+ERKNR VME+AR +L  R+I N F A+
Sbjct: 722 LPYTPQQNGVSERKNRTVMEMARCLLLERKIPNQFLAE 759



 Score = 59.7 bits (143), Expect(2) = 3e-29
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           FQ   VWRA++ L+L+ TD+CGP++T S  GN YFL FIDDY++
Sbjct: 616 FQANQVWRANQKLQLIHTDVCGPIKTDSLSGNKYFLLFIDDYTR 659


>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1140

 Score =  102 bits (255), Expect(2) = 5e-29
 Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 WVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRHQLT 311
           WVYFLK  SEV+  F+ F +  EN+ G  IK LRSD G E  +    DFL++ GI HQLT
Sbjct: 557 WVYFLKHKSEVFVAFQRFKATVENQCGSLIKILRSDNGTEFTSNQFKDFLQKAGIHHQLT 616

Query: 312 VCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
           V YTPQQNGV+ERKNR++M +AR +L  + +  + WA+
Sbjct: 617 VTYTPQQNGVSERKNRSIMNMARCLLFEKGLPKVLWAE 654



 Score = 50.8 bits (120), Expect(2) = 5e-29
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           F     WRA+  L+L+ TD+CGPM T S+ G+ YFL FI+D ++
Sbjct: 511 FPINQAWRATEKLQLIHTDVCGPMSTPSYNGSKYFLLFINDLTR 554


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  107 bits (266), Expect(2) = 8e-29
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRH 302
           +KTWVYFL E SE +  FK+F +  E E+   ++ LR+DRGGE  +     F   HGIR 
Sbjct: 544 RKTWVYFLVEKSEAFAVFKSFKTYVEKETSSFLRCLRTDRGGEFTSQEFAIFCDVHGIRR 603

Query: 303 QLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFW 419
           QLT  YTPQQNGVAERKNR +M + RSML A+++   FW
Sbjct: 604 QLTAAYTPQQNGVAERKNRTIMNMVRSMLSAKKLPKTFW 642



 Score = 45.8 bits (107), Expect(2) = 8e-29
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 10  KNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           K+ WRA+  L+LV  D+CGP+   S     Y LTF DD+S+K
Sbjct: 504 KSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRK 545


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
           gi|31429795|gb|AAP51797.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1350

 Score = 97.8 bits (242), Expect(2) = 1e-28
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 WVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRHQLT 311
           WVYFLKE S   + FK F +M EN+S   IK LRSD+GGE I+     + +  GIR QLT
Sbjct: 474 WVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLT 533

Query: 312 VCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
             Y+ QQNGVAERKNR + ++A SML+ + +   FWA+
Sbjct: 534 AGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAE 571



 Score = 54.7 bits (130), Expect(2) = 1e-28
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           F +   WRAS  LELV TD+ G + T S GGN YF+TFIDDY++
Sbjct: 428 FPHSGAWRASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTR 471


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1198

 Score = 97.8 bits (242), Expect(2) = 1e-28
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 WVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRHQLT 311
           WVYFLKE S   + FK F +M EN+S   IK LRSD+GGE I+     + +  GIR QLT
Sbjct: 502 WVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLT 561

Query: 312 VCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
             Y+ QQNGVAERKNR + ++A SML+ + +   FWA+
Sbjct: 562 AGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAE 599



 Score = 54.7 bits (130), Expect(2) = 1e-28
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           F +   WRAS  LELV TD+ G + T S GGN YF+TFIDDY++
Sbjct: 456 FPHSGAWRASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTR 499


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108708461|gb|ABF96256.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score = 97.8 bits (242), Expect(2) = 1e-28
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 WVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRHQLT 311
           WVYFLKE S   + FK F +M EN+S   IK LRSD+GGE I+     + +  GIR QLT
Sbjct: 425 WVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLT 484

Query: 312 VCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
             Y+ QQNGVAERKNR + ++A SML+ + +   FWA+
Sbjct: 485 AGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAE 522



 Score = 54.7 bits (130), Expect(2) = 1e-28
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           F +   WRAS  LELV TD+ G + T S GGN YF+TFIDDY++
Sbjct: 379 FPHSRAWRASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTR 422


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 97.8 bits (242), Expect(2) = 1e-28
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 WVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRHQLT 311
           WVYFLKE S   + FK F +M EN+S   IK LRSD+GGE I+     + +  GIR QLT
Sbjct: 341 WVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLT 400

Query: 312 VCYTPQQNGVAERKNRAVMELARSMLKARRISNIFWAK 425
             Y+ QQNGVAERKNR + ++A SML+ + +   FWA+
Sbjct: 401 AGYSTQQNGVAERKNRTINDMANSMLQDKGMPKSFWAE 438



 Score = 54.7 bits (130), Expect(2) = 1e-28
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +1

Query: 1   FQNKNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSK 132
           F +   WRAS  LELV TD+ G + T S GGN YF+TFIDDY++
Sbjct: 295 FPHSGAWRASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTR 338


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score =  100 bits (250), Expect(2) = 2e-28
 Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
 Frame = +3

Query: 129 QKTWVYFLKETSEVYKYFKNF*SMAENESGYSIKTLRSDRGGECIA--LTDFLKEHGIRH 302
           +K W Y L E SE +++FK F +  E ESG  +  LRSDRGGE  +    ++ KE GI+ 
Sbjct: 527 RKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKR 586

Query: 303 QLTVCYTPQQNGVAERKNRAVMELARSMLKARRISNIFW 419
           QLT  YTPQQNGVAERKNR+VM + R ML    +   FW
Sbjct: 587 QLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFW 625



 Score = 50.8 bits (120), Expect(2) = 2e-28
 Identities = 20/42 (47%), Positives = 31/42 (73%)
 Frame = +1

Query: 10  KNVWRASRCLELVDTDLCGPMQTASFGGN*YFLTFIDDYSKK 135
           ++ W++++ L+LV TD+CGP+  AS  G  Y L FIDD+S+K
Sbjct: 487 ESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRK 528