BLASTX nr result
ID: Sinomenium22_contig00058618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00058618
(308 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein... 119 9e-37
ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prun... 113 5e-35
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis] 115 5e-24
ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containi... 115 5e-24
ref|XP_002305798.2| pentatricopeptide repeat-containing family p... 114 2e-23
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu... 114 2e-23
ref|XP_006377358.1| pentatricopeptide repeat-containing family p... 113 3e-23
ref|XP_007217805.1| hypothetical protein PRUPE_ppa026585mg [Prun... 87 1e-22
ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citr... 86 3e-21
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 106 4e-21
ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat... 86 6e-21
ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat... 86 8e-21
ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat... 86 8e-21
ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Popu... 87 1e-20
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-20
ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group] g... 104 1e-20
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,... 103 2e-20
gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indi... 103 2e-20
>ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780995|gb|EOY28251.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 905
Score = 119 bits (299), Expect(2) = 9e-37
Identities = 53/68 (77%), Positives = 62/68 (91%)
Frame = -3
Query: 204 GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGP 25
GT+LI+MY+RCGNV+KAR+ FD M E+NVVAWTAMISGYGMHG+G QAIELF +MR HGP
Sbjct: 570 GTALINMYSRCGNVSKAREAFDSMEEKNVVAWTAMISGYGMHGHGSQAIELFSEMRVHGP 629
Query: 24 RPNDVTFV 1
RPN+VTFV
Sbjct: 630 RPNNVTFV 637
Score = 59.7 bits (143), Expect(2) = 9e-37
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC 183
NSMISGYEQNGF KEAV +F+ MQD GV+PDS T V AC
Sbjct: 501 NSMISGYEQNGFGKEAVGLFYLMQDSGVKPDSTTFVCLLSAC 542
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L+S YA+ G++ AR+VFD M E+ VVAW +MISGY +G+G +A+ LF+ M+ G +P
Sbjct: 471 ALVSFYAKSGDLGVARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVGLFYLMQDSGVKP 530
Query: 18 NDVTFV 1
+ TFV
Sbjct: 531 DSTTFV 536
>ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prunus persica]
gi|462409071|gb|EMJ14405.1| hypothetical protein
PRUPE_ppb012387mg [Prunus persica]
Length = 588
Score = 113 bits (282), Expect(2) = 5e-35
Identities = 53/68 (77%), Positives = 58/68 (85%)
Frame = -3
Query: 204 GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGP 25
GTSLI MYARCGNV+KAR+VFD M ERNV+AWTAMISGY +GYG QA+ELF QMR HGP
Sbjct: 253 GTSLIIMYARCGNVSKAREVFDSMNERNVIAWTAMISGYATNGYGIQAVELFCQMRAHGP 312
Query: 24 RPNDVTFV 1
PN VTFV
Sbjct: 313 VPNTVTFV 320
Score = 60.5 bits (145), Expect(2) = 5e-35
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC 183
NSMISGYEQNGF++EA+EVF +M+++GVEPDS T V AC
Sbjct: 184 NSMISGYEQNGFSREAIEVFNQMRELGVEPDSTTFVSVLAAC 225
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/66 (48%), Positives = 50/66 (75%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L+++Y++ G++ AR++FD M ER+VVAW +MISGY +G+ +AIE+F+QMR G P
Sbjct: 154 ALVTLYSKSGDLDAARKLFDKMPERSVVAWNSMISGYEQNGFSREAIEVFNQMRELGVEP 213
Query: 18 NDVTFV 1
+ TFV
Sbjct: 214 DSTTFV 219
>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 124 bits (312), Expect = 1e-26
Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 8/89 (8%)
Frame = -3
Query: 243 DAGCW-----SGAGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGY 88
D GCW G GF + GTSLI+MY RCGNV+KAR+VFD M+ERNVV WTAMISGY
Sbjct: 307 DFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGY 366
Query: 87 GMHGYGPQAIELFHQMRTHGPRPNDVTFV 1
GMHGYG QA+ELF +MR +GPRPN++TFV
Sbjct: 367 GMHGYGRQAMELFTEMRAYGPRPNNITFV 395
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+LI++YA+ ++ A++VFD M +R ++AW ++ISGY +G ++I LFH M G +P
Sbjct: 229 ALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQP 288
Query: 18 NDVTFV 1
+ T V
Sbjct: 289 DSATIV 294
>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 124 bits (312), Expect = 1e-26
Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 8/89 (8%)
Frame = -3
Query: 243 DAGCW-----SGAGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGY 88
D GCW G GF + GTSLI+MY RCGNV+KAR+VFD M+ERNVV WTAMISGY
Sbjct: 243 DFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGY 302
Query: 87 GMHGYGPQAIELFHQMRTHGPRPNDVTFV 1
GMHGYG QA+ELF +MR +GPRPN++TFV
Sbjct: 303 GMHGYGRQAMELFTEMRAYGPRPNNITFV 331
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+LI++YA+ ++ A++VFD M +R ++AW ++ISGY +G ++I LFH M G +P
Sbjct: 165 ALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQP 224
Query: 18 NDVTFV 1
+ T V
Sbjct: 225 DSATIV 230
>gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis]
Length = 586
Score = 115 bits (289), Expect = 5e-24
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -3
Query: 237 GCWS-----GAGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGM 82
GCW G G + GTSLI+MYARCGNV+KAR+VFD M ERNVV WTA+IS YGM
Sbjct: 232 GCWVHDYIVGNGLDLTVVLGTSLINMYARCGNVSKAREVFDSMSERNVVTWTAVISAYGM 291
Query: 81 HGYGPQAIELFHQMRTHGPRPNDVTFV 1
HGYG QA+ELFH+M+ HG PN+VTFV
Sbjct: 292 HGYGSQAMELFHRMKAHGSCPNNVTFV 318
Score = 70.5 bits (171), Expect(2) = 3e-12
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L++ YA+ G++ AR+VFD M ER VVAW +MIS Y +G +AIE+F +MR G RP
Sbjct: 152 ALVNFYAKSGDLGVARKVFDEMSERTVVAWNSMISAYEQNGCAREAIEVFCRMRERGVRP 211
Query: 18 NDVTFV 1
+ TFV
Sbjct: 212 DSTTFV 217
Score = 26.6 bits (57), Expect(2) = 3e-12
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC 183
NS++ +GFA + V + RM V P S T AC
Sbjct: 81 NSLVKASSSSGFAIDTVVFYLRMLQSRVSPSSYTFTSVIKAC 122
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC----MLDVGMW 162
NSMIS YEQNG A+EA+EVF RM++ GV PDS T V AC L +G W
Sbjct: 182 NSMISAYEQNGCAREAIEVFCRMRERGVRPDSTTFVSVLSACSQLGALGLGCW 234
>ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Citrus sinensis]
Length = 580
Score = 115 bits (289), Expect = 5e-24
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = -3
Query: 201 TSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPR 22
TSLI+MYARCGNV+KAR++FD M E NV+AWTAMISGYGMHGYG A+ELFH+MR HG R
Sbjct: 246 TSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTGAVELFHRMRAHGVR 305
Query: 21 PNDVTFV 1
PN+VTFV
Sbjct: 306 PNNVTFV 312
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L++ YA+ NV AR+VFD M +++VVAW +MISGY +G+ +AI LF+ MR G P
Sbjct: 146 ALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNP 205
Query: 18 NDVTFV 1
+ T V
Sbjct: 206 DSTTCV 211
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LACM----LDVGMW 162
NSMISGYEQNGFAKEA+ +F M+D GV PDS T V AC +D+G W
Sbjct: 176 NSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRW 228
>ref|XP_002305798.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550340302|gb|EEE86309.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 591
Score = 114 bits (284), Expect = 2e-23
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -3
Query: 237 GCWS-----GAGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGM 82
GCW G G + GTSLI+MY RCGNV+KAR+VFD M+ERNVVAWTAMISGYG
Sbjct: 231 GCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGT 290
Query: 81 HGYGPQAIELFHQMRTHGPRPNDVTFV 1
+GYG QA+ELFH+MR +G PN +TFV
Sbjct: 291 NGYGSQAVELFHEMRRNGLLPNSITFV 317
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = -3
Query: 201 TSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPR 22
T+L+S Y +CG + AR+VFD MR+R+VV W +MISGY +G+ +AI LF +M+ G
Sbjct: 150 TALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVE 209
Query: 21 PNDVTFV 1
PN TFV
Sbjct: 210 PNSATFV 216
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC 183
NSMISGYEQNGFAKEA+ +F RM+++GVEP+SAT V AC
Sbjct: 181 NSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSAC 222
>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 592
Score = 114 bits (284), Expect = 2e-23
Identities = 50/68 (73%), Positives = 62/68 (91%)
Frame = -3
Query: 204 GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGP 25
GT+L++MY+RCGNV+KAR+VFD M E+N+VAWTAMISGYGMHG+G QAIELF++M GP
Sbjct: 257 GTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGP 316
Query: 24 RPNDVTFV 1
RPN+VTFV
Sbjct: 317 RPNNVTFV 324
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L+S YA+ G+V AR+VFD M E+ VVAW +MISGY +G+G +A+ELF M+ G +P
Sbjct: 158 ALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKP 217
Query: 18 NDVTFV 1
+ TFV
Sbjct: 218 DSSTFV 223
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC----MLDVGMW 162
NSMISGYEQNGF KEAVE+FF MQD+GV+PDS+T V AC + +G W
Sbjct: 188 NSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFW 240
>ref|XP_006377358.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550327646|gb|ERP55155.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 585
Score = 113 bits (282), Expect = 3e-23
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -3
Query: 237 GCWS-----GAGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGM 82
GCW G G + GTSLI+MY RCGNV+KAR+VFD M+ERNVVAWTAMISGYG
Sbjct: 231 GCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGT 290
Query: 81 HGYGPQAIELFHQMRTHGPRPNDVTFV 1
+GYG QA+ELFH+MR +G PN +TFV
Sbjct: 291 NGYGSQAVELFHEMRRNGLFPNSITFV 317
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/66 (46%), Positives = 49/66 (74%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L+++Y +CG++ AR+VFD +RER++VAW +MISGY +G+ +AI LF +M+ G P
Sbjct: 151 ALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEP 210
Query: 18 NDVTFV 1
+ TFV
Sbjct: 211 DSATFV 216
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC----MLDVGMW 162
NSMISGYEQNGFAKEA+ +F RM++ GVEPDSAT V AC +G W
Sbjct: 181 NSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCW 233
>ref|XP_007217805.1| hypothetical protein PRUPE_ppa026585mg [Prunus persica]
gi|462413955|gb|EMJ19004.1| hypothetical protein
PRUPE_ppa026585mg [Prunus persica]
Length = 715
Score = 86.7 bits (213), Expect(2) = 1e-22
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = -3
Query: 201 TSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPR 22
T+LI MYA+CG+V AR VFD ++VV W+AMI GYG+HG G +AI+L+H M+ G R
Sbjct: 383 TALIDMYAKCGSVDYARMVFDRTPNKDVVVWSAMIVGYGLHGRGREAIDLYHSMQQAGVR 442
Query: 21 PNDVTFV 1
PNDVTF+
Sbjct: 443 PNDVTFL 449
Score = 45.4 bits (106), Expect(2) = 1e-22
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC 183
N+MISGY +NG+A+EAVE+F M + PDS T+ LAC
Sbjct: 313 NAMISGYAKNGYAEEAVELFREMISKSMRPDSITMRSAILAC 354
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L +MYA+ G V AR F M+ N++ W AMISGY +GY +A+ELF +M + RP
Sbjct: 283 ALTAMYAKSGQVMAARSFFYQMKTPNLILWNAMISGYAKNGYAEEAVELFREMISKSMRP 342
Query: 18 NDVT 7
+ +T
Sbjct: 343 DSIT 346
Score = 30.8 bits (68), Expect(2) = 2e-11
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 305 SMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
S+ISGY QNG EA+ +F M+ + V+ D LV
Sbjct: 213 SIISGYAQNGQPLEALRIFGLMRKLNVKLDWIVLV 247
Score = 59.3 bits (142), Expect = 5e-07
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = -3
Query: 195 LISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMR 37
L+++YA+CG + AR VFD + ER +V+WT++ISGY +G +A+ +F MR
Sbjct: 183 LVALYAKCGRIESARAVFDCLSERTIVSWTSIISGYAQNGQPLEALRIFGLMR 235
>ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citrus clementina]
gi|557532232|gb|ESR43415.1| hypothetical protein
CICLE_v10011274mg [Citrus clementina]
Length = 636
Score = 85.5 bits (210), Expect(2) = 3e-21
Identities = 37/66 (56%), Positives = 50/66 (75%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+LI+MYARCGN+ KAR +FDGM + VV+WTA+I GYG+HG+G A++LF +M G RP
Sbjct: 308 ALINMYARCGNLKKARAIFDGMPRKTVVSWTAIIGGYGIHGHGEVAVQLFDEMLKSGIRP 367
Query: 18 NDVTFV 1
+ FV
Sbjct: 368 DGTAFV 373
Score = 42.0 bits (97), Expect(2) = 3e-21
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
N+MISGY QNG A + +E++ M+ +GV PD+ T V
Sbjct: 237 NAMISGYAQNGLATDVLELYREMKSLGVCPDAVTFV 272
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = -3
Query: 204 GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGP 25
G L++MY +CG+V R++FD + E+ ++ W AMISGY +G +EL+ +M++ G
Sbjct: 205 GNCLMTMYVKCGSVDYGRKLFDQVPEKGLITWNAMISGYAQNGLATDVLELYREMKSLGV 264
Query: 24 RPNDVTFV 1
P+ VTFV
Sbjct: 265 CPDAVTFV 272
>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Vitis vinifera]
Length = 561
Score = 106 bits (264), Expect = 4e-21
Identities = 53/82 (64%), Positives = 59/82 (71%), Gaps = 8/82 (9%)
Frame = -3
Query: 243 DAGCWSGAGFSDS--------GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGY 88
D GCW ++ GTSLI+MY RCGNV+KAR+VFD M ERNVVAWTAMISGY
Sbjct: 235 DLGCWVHDYIVNNSFDVNVVLGTSLINMYTRCGNVSKAREVFDEMNERNVVAWTAMISGY 294
Query: 87 GMHGYGPQAIELFHQMRTHGPR 22
GMHGYG +AIELF MR HG R
Sbjct: 295 GMHGYGREAIELFRLMRIHGMR 316
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+LI+ YA+ G+V +A++VFD M ER ++AW +MISGY +G+ +A+ LF++MR G
Sbjct: 157 ALIAFYAKSGDVGEAKKVFDRMPERTIIAWNSMISGYDQNGFSKEAVGLFYRMRELGVEF 216
Query: 18 NDVTFV 1
+ TFV
Sbjct: 217 DSATFV 222
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC----MLDVGMW 162
NSMISGY+QNGF+KEAV +F+RM+++GVE DSAT V AC LD+G W
Sbjct: 187 NSMISGYDQNGFSKEAVGLFYRMRELGVEFDSATFVSVLSACSQSGALDLGCW 239
>ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Citrus sinensis]
Length = 636
Score = 85.5 bits (210), Expect(2) = 6e-21
Identities = 37/66 (56%), Positives = 50/66 (75%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+LI+MYARCGN+ KAR +FDGM + VV+WTA+I GYG+HG+G A++LF +M G RP
Sbjct: 308 ALINMYARCGNLKKARAIFDGMPRKTVVSWTAIIGGYGIHGHGEVAVQLFDEMLKSGIRP 367
Query: 18 NDVTFV 1
+ FV
Sbjct: 368 DGTAFV 373
Score = 40.8 bits (94), Expect(2) = 6e-21
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
N+MISGY QNG A +E++ M+ +GV PD T V
Sbjct: 237 NAMISGYAQNGLATHVLELYREMKSLGVCPDGVTFV 272
Score = 67.0 bits (162), Expect = 3e-09
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = -3
Query: 204 GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGP 25
G L++MY +CG+V R++FD + E+ ++ W AMISGY +G +EL+ +M++ G
Sbjct: 205 GNCLMTMYVKCGSVDYGRKLFDQVPEKGLITWNAMISGYAQNGLATHVLELYREMKSLGV 264
Query: 24 RPNDVTFV 1
P+ VTFV
Sbjct: 265 CPDGVTFV 272
>ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 85.9 bits (211), Expect(2) = 8e-21
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Frame = -3
Query: 222 AGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIEL 52
+GF+ + +LI+MYARCGN+ KA+ VFDGM ER +V+WTA+I GYGMHG+G A++L
Sbjct: 282 SGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQL 341
Query: 51 FHQMRTHGPRPNDVTFV 1
F +M G P+ FV
Sbjct: 342 FKEMIRSGIEPDGTAFV 358
Score = 40.0 bits (92), Expect(2) = 8e-21
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
N+M+SGY QNG A +E++ M GV PD TLV
Sbjct: 222 NAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLV 257
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = -3
Query: 192 ISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRPND 13
I+MY +CG+V A+++FD M + +++W AM+SGY +G +EL+ M +G P+
Sbjct: 194 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 253
Query: 12 VTFV 1
VT V
Sbjct: 254 VTLV 257
>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 85.9 bits (211), Expect(2) = 8e-21
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Frame = -3
Query: 222 AGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIEL 52
+GF+ + +LI+MYARCGN+ KA+ VFDGM ER +V+WTA+I GYGMHG+G A++L
Sbjct: 273 SGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQL 332
Query: 51 FHQMRTHGPRPNDVTFV 1
F +M G P+ FV
Sbjct: 333 FKEMIRSGIEPDGTAFV 349
Score = 40.0 bits (92), Expect(2) = 8e-21
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
N+M+SGY QNG A +E++ M GV PD TLV
Sbjct: 213 NAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLV 248
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = -3
Query: 192 ISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRPND 13
I+MY +CG+V A+++FD M + +++W AM+SGY +G +EL+ M +G P+
Sbjct: 185 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 244
Query: 12 VTFV 1
VT V
Sbjct: 245 VTLV 248
>ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Populus trichocarpa]
gi|550336888|gb|EEE92945.2| hypothetical protein
POPTR_0006s22800g [Populus trichocarpa]
Length = 604
Score = 87.4 bits (215), Expect(2) = 1e-20
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = -3
Query: 225 GAGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIE 55
G GFS + +L++MYARCGN+ KAR +FDGM ++VV+WTA+I GYGMHG G A+E
Sbjct: 242 GFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVE 301
Query: 54 LFHQMRTHGPRPNDVTFV 1
LF +M G +P+ FV
Sbjct: 302 LFDEMIRGGIKPDGTAFV 319
Score = 38.1 bits (87), Expect(2) = 1e-20
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
N+MI+GY QNG A +E++ M+ G PD TLV
Sbjct: 183 NAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLV 218
Score = 56.6 bits (135), Expect(2) = 3e-10
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -3
Query: 213 SDSGTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRT 34
S G L++MY + G + R++FD M + ++ W AMI+GY +G +EL+ +M +
Sbjct: 148 SSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMES 207
Query: 33 HGPRPNDVTFV 1
G P+ +T V
Sbjct: 208 KGFCPDPLTLV 218
Score = 33.5 bits (75), Expect(2) = 3e-10
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
NS++SGY N K+ V +F M+++GVE + T++
Sbjct: 82 NSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTML 117
>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 85.1 bits (209), Expect(2) = 1e-20
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = -3
Query: 201 TSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPR 22
TSLI MYA+CG+V AR+VFD +++VV W+AMI GYG+HG G +AI L+H M+ G
Sbjct: 395 TSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVF 454
Query: 21 PNDVTFV 1
PNDVTF+
Sbjct: 455 PNDVTFI 461
Score = 40.0 bits (92), Expect(2) = 1e-20
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATL 204
N+MISGY +NG A+EAV +F M ++PDS T+
Sbjct: 325 NAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTV 359
Score = 66.2 bits (160), Expect(2) = 1e-14
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
SL + YA+CG V A+ FD M+ NV+ W AMISGY +G+ +A+ LFH M + +P
Sbjct: 295 SLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKP 354
Query: 18 NDVT 7
+ VT
Sbjct: 355 DSVT 358
Score = 38.9 bits (89), Expect(2) = 1e-14
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -1
Query: 305 SMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLV 201
S+ISGY QNG A EA+ +F +M++ GV+PD LV
Sbjct: 225 SIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALV 259
Score = 69.7 bits (169), Expect = 4e-10
Identities = 27/65 (41%), Positives = 47/65 (72%)
Frame = -3
Query: 195 LISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRPN 16
L+++YA+CG++ A+ VFDG+ R +V+WT++ISGY +G +A+ +F QMR +G +P+
Sbjct: 195 LVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPD 254
Query: 15 DVTFV 1
+ V
Sbjct: 255 WIALV 259
>ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa
Japonica Group] gi|125578708|gb|EAZ19854.1| hypothetical
protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 104 bits (259), Expect = 1e-20
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = -3
Query: 204 GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGP 25
G++L++MYARCG V+KAR FD ++ERNVV WT+MI+GYGMHG+G +AI+LFH MR GP
Sbjct: 248 GSALVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGP 307
Query: 24 RPNDVTFV 1
PNDVTFV
Sbjct: 308 TPNDVTFV 315
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = -3
Query: 201 TSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPR 22
T+L+ +Y++CG + AR++FD +R+R+VVAW AMISGY +G +AIE++ +M+
Sbjct: 148 TALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYREMQVAQVV 207
Query: 21 PNDVTFV 1
P+ TFV
Sbjct: 208 PDSATFV 214
>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 386
Score = 103 bits (258), Expect = 2e-20
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 8/87 (9%)
Frame = -3
Query: 237 GCWS-----GAGFSDS---GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGM 82
GCW G G + GTSLI+MY RCG V KAR+VFD M+E+NVV WTAMISGYG
Sbjct: 231 GCWVHKYTIGHGLDLNVVLGTSLINMYTRCGTVTKAREVFDSMKEKNVVTWTAMISGYGT 290
Query: 81 HGYGPQAIELFHQMRTHGPRPNDVTFV 1
+G+G QA++LF +M+ GP PN VTFV
Sbjct: 291 NGHGRQAVQLFDEMKRRGPCPNSVTFV 317
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = -3
Query: 198 SLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPRP 19
+L++ YA+ G++ AR+VFD MRER+VV+W ++ISGY +G+G +AI LF +MR G P
Sbjct: 151 ALVACYAKSGDLGNARKVFDKMRERSVVSWNSIISGYEQNGFGREAIRLFKKMREEGFEP 210
Query: 18 NDVTFV 1
+ TFV
Sbjct: 211 DSATFV 216
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = -1
Query: 308 NSMISGYEQNGFAKEAVEVFFRMQDVGVEPDSATLVLR*LAC----MLDVGMW 162
NS+ISGYEQNGF +EA+ +F +M++ G EPDSAT V+ AC L +G W
Sbjct: 181 NSIISGYEQNGFGREAIRLFKKMREEGFEPDSATFVIVLSACAQLGALSMGCW 233
>gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 103 bits (258), Expect = 2e-20
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = -3
Query: 204 GTSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGP 25
G++L++MYARCG V+KAR FD ++ERNVV WT+MI+GYGMHG+G +AI+LFH MR GP
Sbjct: 248 GSALVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIKLFHLMRLEGP 307
Query: 24 RPNDVTFV 1
PNDVTFV
Sbjct: 308 TPNDVTFV 315
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = -3
Query: 201 TSLISMYARCGNVAKARQVFDGMRERNVVAWTAMISGYGMHGYGPQAIELFHQMRTHGPR 22
T+L+ +Y++CG + AR++FD +R+R+VVAW AMISGY +G +AIE++ +M+
Sbjct: 148 TALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYREMQVAQVV 207
Query: 21 PNDVTFV 1
P+ TFV
Sbjct: 208 PDSATFV 214