BLASTX nr result
ID: Sinomenium22_contig00058575
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00058575
(477 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 83 6e-30
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 79 1e-28
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 80 2e-26
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 75 1e-25
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 75 1e-25
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 74 4e-25
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 68 1e-23
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 68 2e-23
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 70 2e-23
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 67 2e-23
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 67 2e-23
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 68 3e-23
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 67 7e-23
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 67 1e-22
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 66 3e-22
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 68 3e-22
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 66 3e-22
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 66 4e-22
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 71 4e-22
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera] 87 5e-22
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 82.8 bits (203), Expect(2) = 6e-30
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGL 322
YVFTLGGGSVSWRSILQST ALST EAEY+ TEA KEAIWLK L+ DLG+
Sbjct: 164 YVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGV 214
Score = 73.9 bits (180), Expect(2) = 6e-30
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAI + KNQ +HARTK+IDV+YH VR+ I+ G++L++K T +N S LT+ V + KF+H
Sbjct: 227 SAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQH 286
Query: 137 CLDLLNI 117
CL L+ I
Sbjct: 287 CLKLIQI 293
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 79.3 bits (194), Expect(2) = 1e-28
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAI + KNQVFHARTK+ID RYHR+RD ++ G I+VEK HTD+NA+ FLT+ V +K+
Sbjct: 1233 SAIHLAKNQVFHARTKHIDARYHRIRDWVEAGVIIVEKVHTDDNAADFLTKPVSVEKY-- 1290
Query: 137 CLDLLNIT 114
LL+IT
Sbjct: 1291 ---LLSIT 1295
Score = 73.2 bits (178), Expect(2) = 1e-28
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGL 322
YVFT GGG VSW++ LQ+ +ALST EAEYM +TEASKEAIWL L LG+
Sbjct: 1170 YVFTCGGGPVSWKATLQAVTALSTTEAEYMALTEASKEAIWLNGLAGQLGV 1220
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 79.7 bits (195), Expect(2) = 2e-26
Identities = 35/64 (54%), Positives = 50/64 (78%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAI + KNQV+HARTK+IDVR+H++ + + GE+L++K HT ENA+ LT+ V +KF+H
Sbjct: 342 SAIYLEKNQVYHARTKHIDVRFHKISELVSSGELLLKKVHTSENAADMLTKPVTTEKFKH 401
Query: 137 CLDL 126
CL L
Sbjct: 402 CLKL 405
Score = 65.5 bits (158), Expect(2) = 2e-26
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGLK 319
YVFTLGGG + W+S++QS AL T ++EYM I E +KE++WL LV +LG++
Sbjct: 279 YVFTLGGGPICWKSMIQSLVALYTTKSEYMAIAETTKESLWLTGLVKELGIQ 330
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 75.5 bits (184), Expect(2) = 1e-25
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGL 322
YVFTLGG VSW++ LQ T LST EAEYM +TEA+KE IWLK LV+DLGL
Sbjct: 1178 YVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGL 1228
Score = 67.0 bits (162), Expect(2) = 1e-25
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC+ K+QV H RTK+IDVRYH +R I V+K T +N + T+ V + KF+H
Sbjct: 1241 SAICLAKDQVHHERTKHIDVRYHFLR---SEKRIKVKKVGTADNPADMFTKPVPQSKFQH 1297
Query: 137 CLDLLNI 117
CLDLLNI
Sbjct: 1298 CLDLLNI 1304
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 74.7 bits (182), Expect(2) = 1e-25
Identities = 33/52 (63%), Positives = 45/52 (86%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGLK 319
YVFT+GG +VSW++ LQS +ALST EAE+M +TEA+KEA+W+K L+ DLGL+
Sbjct: 454 YVFTVGGNTVSWKANLQSVTALSTTEAEFMALTEAAKEALWIKGLMKDLGLE 505
Score = 67.8 bits (164), Expect(2) = 1e-25
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC++KN H RTK+IDVRY+ +RD ++ G++ V K HT N + LT+S+ +KF+
Sbjct: 517 SAICLSKNSTHHERTKHIDVRYNFIRDVVEAGDVDVLKIHTSRNPADALTKSIPVNKFQS 576
Query: 137 CLDLLNITYVD 105
L+LL + D
Sbjct: 577 ALELLKLVKWD 587
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 73.6 bits (179), Expect(2) = 4e-25
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAI + KNQ FH R+K+IDVR H VRD I GEI V K HT +N S LT+S+ KF+H
Sbjct: 1139 SAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKH 1198
Query: 137 CLDLLNI 117
CL+L+N+
Sbjct: 1199 CLNLINM 1205
Score = 67.0 bits (162), Expect(2) = 4e-25
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGL 322
YVFT GG+VSW++ LQS ALST EAEYM +TEA KEAIWLK + +L +
Sbjct: 1076 YVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITEELAM 1126
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 67.8 bits (164), Expect(2) = 1e-23
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
YVFT+GG +VSW++ LQ+T ALST EAEYM I+EA KEAIWL+ L +L
Sbjct: 1050 YVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTEL 1098
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC+TK+Q+FH RTK+IDVRYH +R I G++ V K T +N + +T+ V KFE
Sbjct: 1113 SAICLTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFEL 1172
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1173 CSSLVGVT 1180
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 68.2 bits (165), Expect(2) = 2e-23
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC++KN FH RTK+++V+++ +RD I+ GE+ V K HT N + LT+ + KFE
Sbjct: 1240 SAICLSKNNAFHDRTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKKFEE 1299
Query: 137 CLDLLNI 117
LD+L +
Sbjct: 1300 ALDVLKL 1306
Score = 66.6 bits (161), Expect(2) = 2e-23
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGLK 319
YVFT+GG +VSW+S LQ ALS+ +AE++ +TEA KEAIW++ L+ D+GL+
Sbjct: 1177 YVFTVGGNTVSWKSSLQHVVALSSTQAEFIALTEAVKEAIWIRGLLEDMGLQ 1228
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 70.5 bits (171), Expect(2) = 2e-23
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAI + KNQ FH R+K+IDVR H VRD I +GEI V K T +N S LT+S+ KF+H
Sbjct: 666 SAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGEIGVGKVPTKDNPSDMLTKSLNVTKFKH 725
Query: 137 CLDLLNI 117
CL+L+N+
Sbjct: 726 CLNLINM 732
Score = 63.9 bits (154), Expect(2) = 2e-23
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGL 322
YVFT+ GG+VSW++ LQS ALS EAEYM +TE KE IWLK ++ +L +
Sbjct: 603 YVFTVFGGAVSWKANLQSVVALSATEAEYMAMTEVVKEVIWLKGIIEELAM 653
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 67.4 bits (163), Expect(2) = 2e-23
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
YVFT+GG VSW++ LQ+T ALST EAEYM I+EA KEAIWL+ L +L
Sbjct: 1181 YVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTEL 1229
Score = 67.0 bits (162), Expect(2) = 2e-23
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC+TK+Q+FH RTK+IDVRYH +R I G++ V K T +N + +T+ V KFE
Sbjct: 1244 SAICLTKDQMFHERTKHIDVRYHIIRGVIVEGDVKVCKISTHDNPADMMTKPVSATKFEL 1303
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1304 CSSLVGVT 1311
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 67.4 bits (163), Expect(2) = 2e-23
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
YVFT+GG VSW++ LQ+T ALST EAEYM I+EA KEAIWL+ L +L
Sbjct: 1149 YVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTEL 1197
Score = 67.0 bits (162), Expect(2) = 2e-23
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC+TK+Q+FH RTK+IDVRYH +R I G++ V K T +N + +T+ V KFE
Sbjct: 1212 SAICLTKDQMFHERTKHIDVRYHIIRGVIVEGDVKVCKISTHDNPADMMTKPVSATKFEL 1271
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1272 CSSLVGVT 1279
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 68.2 bits (165), Expect(2) = 3e-23
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC+TK+Q+FH RTK+IDVRYH +R I G++ V K T +N + +T+ V KFE
Sbjct: 1070 SAICLTKDQMFHERTKHIDVRYHFIRSVITEGDVKVCKISTHDNPADMMTKPVPATKFEL 1129
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1130 CSSLVGVT 1137
Score = 65.9 bits (159), Expect(2) = 3e-23
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
YVFT+GG +VSW++ LQ+T ALST EAEYM I+EA KE IWL+ L +L
Sbjct: 1007 YVFTIGGCAVSWKANLQATVALSTTEAEYMAISEACKETIWLRGLYTEL 1055
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 66.6 bits (161), Expect(2) = 7e-23
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC TK+Q+FH RTK+IDVRYH +R I G++ V K T +N + +T+ V KFE
Sbjct: 1143 SAICFTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPTTKFEL 1202
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1203 CSSLVGVT 1210
Score = 66.2 bits (160), Expect(2) = 7e-23
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
YVFT+GG +VSW++ LQ+T ALST E EYM I+EA KEAIWL+ L +L
Sbjct: 1080 YVFTIGGCAVSWKASLQATVALSTTEVEYMAISEACKEAIWLRGLYTEL 1128
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 66.6 bits (161), Expect(2) = 1e-22
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC+TK+Q+FH RTK+ID+RYH +R I GE+ V K T +N + +T+ V KFE
Sbjct: 1102 SAICLTKDQMFHERTKHIDLRYHFIRGVITEGEVKVCKISTHDNPADMMTKLVPATKFEL 1161
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1162 CSSLVAVT 1169
Score = 65.5 bits (158), Expect(2) = 1e-22
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
YVFT+GG +VSW++ LQ+ ALST EAEYM I+EA KEAIWL+ L +L
Sbjct: 1039 YVFTIGGCAVSWKTSLQAIVALSTTEAEYMAISEACKEAIWLRGLYTEL 1087
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 66.2 bits (160), Expect(2) = 3e-22
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
S IC+TK+Q+FH RTK+IDVRYH +R I G++ V K T +N + +T+ V KFE
Sbjct: 941 SVICLTKDQMFHERTKHIDVRYHFIRGVIAKGDVKVCKISTHDNLADMMTKPVPATKFEL 1000
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1001 CSSLVGVT 1008
Score = 64.7 bits (156), Expect(2) = 3e-22
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -1
Query: 477 VYVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
V VFT+GG +VSW++ LQ+T ALST EA+YM I+EA KEAIWL+ L +L
Sbjct: 877 VIVFTIGGCAVSWKASLQATVALSTTEAKYMAISEACKEAIWLRGLYTEL 926
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 67.8 bits (164), Expect(2) = 3e-22
Identities = 28/52 (53%), Positives = 42/52 (80%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGLK 319
YVFT+GG +VSW++ LQ A+ST EAEY+ + EA+KEA+W+K L+ D+G++
Sbjct: 1223 YVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQ 1274
Score = 63.2 bits (152), Expect(2) = 3e-22
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC++KN V+H RTK+IDVR++ +RD ++ G++ V K HT N LT+ + +KF+
Sbjct: 1286 SAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKS 1345
Query: 137 CLDLLNI 117
L +L +
Sbjct: 1346 ALGVLKL 1352
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 65.9 bits (159), Expect(2) = 3e-22
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDL 328
YVFT+GG +VSW++ LQ+T ALST EAEYM I+EA KE IWL+ L +L
Sbjct: 1110 YVFTVGGCAVSWKASLQATVALSTTEAEYMAISEACKEVIWLRGLYTEL 1158
Score = 65.1 bits (157), Expect(2) = 3e-22
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAIC+TK+Q+FH RTK+ID+RYH +R I G++ V K T +N +T+ V KFE
Sbjct: 1173 SAICLTKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVPATKFEL 1232
Query: 137 CLDLLNIT 114
C L+ +T
Sbjct: 1233 CSSLVGVT 1240
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 66.2 bits (160), Expect(2) = 4e-22
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGL 322
Y+FT GG++SW+S LQ ALST EAEY+ TE KE IWLKR + +LGL
Sbjct: 1196 YLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL 1246
Score = 63.9 bits (154), Expect(2) = 4e-22
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAI ++KN ++HARTK+IDVRYH +R+ +D + V K T+EN + LT+ V ++KFE
Sbjct: 1259 SAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFEL 1318
Query: 137 CLDLLNI 117
C +L+ +
Sbjct: 1319 CKELVGM 1325
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 70.9 bits (172), Expect(2) = 4e-22
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = -1
Query: 474 YVFTLGGGSVSWRSILQSTSALSTIEAEYMVITEASKEAIWLKRLVNDLGLK 319
YVFTL GG+VSW S LQ+ ALST EAEYM T+A KEAIW++RL+ +LG K
Sbjct: 1173 YVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHK 1224
Score = 59.3 bits (142), Expect(2) = 4e-22
Identities = 26/67 (38%), Positives = 45/67 (67%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SA+ + +N FH+RTK+I V+YH VR+ ++ G + ++K HT++N + +T+S+ DKF
Sbjct: 1236 SALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADAMTKSINTDKFIW 1295
Query: 137 CLDLLNI 117
C L +
Sbjct: 1296 CRSLYGL 1302
>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
Length = 215
Score = 87.4 bits (215), Expect(2) = 5e-22
Identities = 37/68 (54%), Positives = 56/68 (82%)
Frame = -2
Query: 317 SAICVTKNQVFHARTKYIDVRYHRVRD*IDLGEILVEKAHTDENASYFLTESVVKDKFEH 138
SAI + KNQV+HARTK+IDVR+H++++ + GE+L+EK HT ENA+ LT+ V +KF+H
Sbjct: 146 SAIYLAKNQVYHARTKHIDVRFHKIKELVSSGELLLEKVHTSENAADMLTKPVTIEKFKH 205
Query: 137 CLDLLNIT 114
CL+L+N++
Sbjct: 206 CLNLINVS 213
Score = 42.7 bits (99), Expect(2) = 5e-22
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -1
Query: 423 STSALSTIEAEYMVITEASKEAIWLKRLVNDLGLK 319
S ALST E EYM I EA KE++WL LV +LG++
Sbjct: 100 SLVALSTTELEYMAIAEAGKESLWLTGLVKELGIQ 134