BLASTX nr result
ID: Sinomenium22_contig00058294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00058294
(341 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 102 4e-20
ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prun... 98 1e-18
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,... 96 4e-18
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis] 91 1e-16
ref|XP_006377358.1| pentatricopeptide repeat-containing family p... 91 1e-16
ref|XP_006449336.1| hypothetical protein CICLE_v100181752mg, par... 90 3e-16
ref|XP_002305798.2| pentatricopeptide repeat-containing family p... 90 3e-16
ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein... 90 3e-16
ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_004505055.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutr... 84 2e-14
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu... 82 8e-14
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar... 81 2e-13
ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Caps... 80 2e-13
ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi... 79 7e-13
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ... 79 9e-13
ref|XP_007159386.1| hypothetical protein PHAVU_002G233900g [Phas... 75 9e-12
>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Vitis vinifera]
Length = 561
Score = 102 bits (255), Expect = 4e-20
Identities = 54/96 (56%), Positives = 62/96 (64%)
Frame = -3
Query: 288 HQQQEPARSSSPPHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXA 109
H Q + SP HS A+QVLL AGPRLKPLQQVH+H+I+SG SR A
Sbjct: 5 HGNQTLQTTLSPSHSPAYQVLLHAGPRLKPLQQVHAHLIVSGSYRSRALLTKLLTLACTA 64
Query: 108 GSIAYTRQLFLSVPNPDSFLFNSLINACSKSNFPLD 1
GSI YTRQLF S+ NPDSFLFN++I A SK F D
Sbjct: 65 GSILYTRQLFFSITNPDSFLFNAIIKASSKFGFSCD 100
>ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prunus persica]
gi|462409071|gb|EMJ14405.1| hypothetical protein
PRUPE_ppb012387mg [Prunus persica]
Length = 588
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/92 (56%), Positives = 60/92 (65%)
Frame = -3
Query: 282 QQEPARSSSPPHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGS 103
+Q SS P S ++ LLRAGP L+ LQQVH HI++SG + SR AGS
Sbjct: 4 KQLAVTGSSTPQSPVYRALLRAGPSLRALQQVHGHIVVSGSHRSRALLTKLITLACEAGS 63
Query: 102 IAYTRQLFLSVPNPDSFLFNSLINACSKSNFP 7
I YTR+LFLSVPNPDSFLFNSLI A SK FP
Sbjct: 64 IFYTRRLFLSVPNPDSFLFNSLIKASSKFGFP 95
>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 386
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = -3
Query: 252 PHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLS 73
PHS A+ LL+AGPRLKPLQQVH+++I+SG HSR AGSI YTRQ+FLS
Sbjct: 10 PHSPAYHFLLQAGPRLKPLQQVHAYVIVSGSGHSRSLLTKLLNLACAAGSIIYTRQIFLS 69
Query: 72 VPNPDSFLFNSLINACSK 19
V NPDSFLFN+LI + SK
Sbjct: 70 VANPDSFLFNTLIKSTSK 87
>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = -3
Query: 249 HSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSV 70
HS H+ LLR+GPRL+ LQQVH+HII+SGL+ SR AGSI Y R+LF +V
Sbjct: 90 HSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTV 149
Query: 69 PNPDSFLFNSLINACSKSNFPLD 1
PNPDSFLF+SL+ SK F +D
Sbjct: 150 PNPDSFLFDSLLKVTSKFGFSID 172
>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = -3
Query: 249 HSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSV 70
HS H+ LLR+GPRL+ LQQVH+HII+SGL+ SR AGSI Y R+LF +V
Sbjct: 26 HSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTV 85
Query: 69 PNPDSFLFNSLINACSKSNFPLD 1
PNPDSFLF+SL+ SK F +D
Sbjct: 86 PNPDSFLFDSLLKVTSKFGFSID 108
>gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis]
Length = 586
Score = 91.3 bits (225), Expect = 1e-16
Identities = 49/100 (49%), Positives = 60/100 (60%)
Frame = -3
Query: 300 MEPKHQQQEPARSSSPPHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXX 121
ME K Q EP HS AH+ LLRAG R++PLQQ H+HI++SG + SR
Sbjct: 1 MEAKRQFTEPFA-----HSPAHEALLRAGSRIRPLQQAHAHIVVSGSHRSRALLTKLLTL 55
Query: 120 XXXAGSIAYTRQLFLSVPNPDSFLFNSLINACSKSNFPLD 1
AGSI Y +L SV NPD+FLFNSL+ A S S F +D
Sbjct: 56 ACKAGSIGYAHRLLYSVRNPDAFLFNSLVKASSSSGFAID 95
>ref|XP_006377358.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550327646|gb|ERP55155.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 585
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = -3
Query: 252 PHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLS 73
PHS A+ LL+AGPRL L QVH+HII+SG SR AGSI+YTRQ+FL+
Sbjct: 10 PHSPAYNFLLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLA 69
Query: 72 VPNPDSFLFNSLINACSKSN 13
VPNPDSFLF SLI + SKS+
Sbjct: 70 VPNPDSFLFTSLIKSTSKSH 89
>ref|XP_006449336.1| hypothetical protein CICLE_v100181752mg, partial [Citrus
clementina] gi|557551947|gb|ESR62576.1| hypothetical
protein CICLE_v100181752mg, partial [Citrus clementina]
Length = 226
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = -3
Query: 252 PHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLS 73
PHS A++ +L+AGPRLKPLQ+VH+H+I+SG SR AG I Y +++F
Sbjct: 6 PHSPAYEAILKAGPRLKPLQKVHAHLIVSGYGRSRSILTKLLSLVCDAGFITYAQRIFFC 65
Query: 72 VPNPDSFLFNSLINACSKSNFPLD 1
+P+PDSFLFN+LI SKSNF D
Sbjct: 66 IPSPDSFLFNTLIIRNSKSNFSTD 89
>ref|XP_002305798.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550340302|gb|EEE86309.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 591
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = -3
Query: 252 PHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLS 73
PHS A+ +LL+AGPRLK L QVH+H+I+SG SR AGSI+YTRQ+FL
Sbjct: 10 PHSPAYNLLLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLI 69
Query: 72 VPNPDSFLFNSLINACSK 19
VPNPDSFLF SLI + SK
Sbjct: 70 VPNPDSFLFTSLIRSTSK 87
>ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780995|gb|EOY28251.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 905
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/101 (49%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 MEPKHQQQEPARSSSPPHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXX 121
ME K + P S HS ++ +LRAGPRLKPLQQVH+ I+I+GL HS+
Sbjct: 318 MEAKQLHRAPPSS----HSPTYRAILRAGPRLKPLQQVHARIVITGLGHSQSLITKLLSF 373
Query: 120 XXXAGS-IAYTRQLFLSVPNPDSFLFNSLINACSKSNFPLD 1
A S + YTR+LFLS+ PD+FLF+SLI SK NFPL+
Sbjct: 374 ACAATSPVCYTRRLFLSISKPDTFLFHSLITLTSKFNFPLE 414
>ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Citrus sinensis]
Length = 580
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = -3
Query: 252 PHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLS 73
PHS A++ +L+AGPRLKPLQQVH+H+I++G SR AG I Y +++F
Sbjct: 6 PHSPAYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFC 65
Query: 72 VPNPDSFLFNSLINACSKSNFPLD 1
+P+PDSFLFN+LI SK+NF D
Sbjct: 66 IPSPDSFLFNTLIIRNSKANFSTD 89
>ref|XP_004505055.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cicer arietinum]
Length = 587
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/100 (45%), Positives = 63/100 (63%)
Frame = -3
Query: 300 MEPKHQQQEPARSSSPPHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXX 121
ME ++++ R S+ ++ ++RAGP ++PLQQ H+H+I++G S+
Sbjct: 1 MEGSKEREDKQRKSAE-----YEAVIRAGPHVRPLQQAHAHLIVTGCYRSKALLTKLLTL 55
Query: 120 XXXAGSIAYTRQLFLSVPNPDSFLFNSLINACSKSNFPLD 1
AGSIAYTR+LFLSV PDSFLFNSLI A S+ F LD
Sbjct: 56 SCAAGSIAYTRRLFLSVTGPDSFLFNSLIKASSQYGFSLD 95
>ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutrema salsugineum]
gi|557111688|gb|ESQ51972.1| hypothetical protein
EUTSA_v10016424mg [Eutrema salsugineum]
Length = 583
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/89 (48%), Positives = 54/89 (60%)
Frame = -3
Query: 267 RSSSPPHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTR 88
++ +S A++ ++RAGPRL LQQVH H I++G SR A +IAYT
Sbjct: 2 KTKEAANSAAYEAIIRAGPRLNQLQQVHGHFIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 87 QLFLSVPNPDSFLFNSLINACSKSNFPLD 1
LFLSVP PD FLFNS+I SK FPLD
Sbjct: 62 LLFLSVPLPDDFLFNSVIKTTSKLRFPLD 90
>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 592
Score = 82.0 bits (201), Expect = 8e-14
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = -3
Query: 288 HQQQEPARSSSPPHSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXA 109
H Q + +++ HS + ++ AGPRLKPLQQ+H+ III+GL +R A
Sbjct: 5 HGNQTTSSTTTLTHSPIYHSIILAGPRLKPLQQIHARIIITGLGRTRSLITKLLSFAYAA 64
Query: 108 GS-IAYTRQLFLSVPNPDSFLFNSLINACSKSNFP 7
S I+YTR+LF S+P PD+FLF+SLI SK +FP
Sbjct: 65 ASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFP 99
>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = -3
Query: 246 SEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSVP 67
S ++ ++ AGP L+ LQQ H+H++++G + SR AGSIAYTR+LF SV
Sbjct: 10 SAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVS 69
Query: 66 NPDSFLFNSLINACSKSNFPLD 1
+PDSFLFNSLI A SK F LD
Sbjct: 70 DPDSFLFNSLIKASSKFGFSLD 91
>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
[Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 583
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = -3
Query: 249 HSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSV 70
+S A++ ++RAGPR+K LQQVH+H+I++G SR A +IAYT LFLSV
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67
Query: 69 PNPDSFLFNSLINACSKSNFPL 4
P PD FLFNS+I + SK PL
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPL 89
>ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Capsella rubella]
gi|482564899|gb|EOA29089.1| hypothetical protein
CARUB_v10025353mg [Capsella rubella]
Length = 579
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = -3
Query: 249 HSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSV 70
+S A++ ++RAGPR+K LQQVH+H+I++G SR A +IAYT LFLSV
Sbjct: 4 NSAAYEAVVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 63
Query: 69 PNPDSFLFNSLINACSKSNFPL 4
P PD FLFNS+I + SK PL
Sbjct: 64 PLPDDFLFNSVIKSTSKLRLPL 85
>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like isoform X1 [Glycine max]
gi|571467023|ref|XP_006583818.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g33760-like isoform X2 [Glycine max]
Length = 582
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = -3
Query: 246 SEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSVP 67
S ++ ++ AGP L+ LQQ H+H++++G + SR AGSIAYTR+LF SV
Sbjct: 10 SAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVS 69
Query: 66 NPDSFLFNSLINACSKSNFPLD 1
+PDSFLFNSLI A S F LD
Sbjct: 70 DPDSFLFNSLIKASSNFGFSLD 91
>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325308|gb|EFH55728.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 583
Score = 78.6 bits (192), Expect = 9e-13
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = -3
Query: 249 HSEAHQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSV 70
+S A++ ++RAGPR+K LQQVH+H+I++ SR A +IAYT LFLSV
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67
Query: 69 PNPDSFLFNSLINACSKSNFPL 4
P PD FLFNS+I + SK PL
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPL 89
>ref|XP_007159386.1| hypothetical protein PHAVU_002G233900g [Phaseolus vulgaris]
gi|561032801|gb|ESW31380.1| hypothetical protein
PHAVU_002G233900g [Phaseolus vulgaris]
Length = 582
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = -3
Query: 237 HQVLLRAGPRLKPLQQVHSHIIISGLNHSRXXXXXXXXXXXXAGSIAYTRQLFLSVPNPD 58
++ ++RAG LK LQQ H+H++++G + SR AGSIAYTR+LF SV +PD
Sbjct: 13 YEAVVRAGRDLKRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPD 72
Query: 57 SFLFNSLINACSKSNFPLD 1
+FLFNSL+ A SK F D
Sbjct: 73 AFLFNSLVKASSKFGFSHD 91