BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00058138
         (428 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus] g...   192   2e-48
sp|Q5QA74.1|RPOA_ACOGR RecName: Full=DNA-directed RNA polymerase...   192   2e-48
gb|AFB74290.1| DNA-directed RNA polymerase subunit alpha, partia...   194   2e-48
gb|AFB74287.1| DNA-directed RNA polymerase subunit alpha, partia...   194   1e-47
gb|ADM14340.1| RNA polymerase alpha subunit [Punica granatum]         194   1e-47
gb|AFB74292.1| DNA-directed RNA polymerase subunit alpha, partia...   191   1e-47
ref|YP_001687169.1| RNA polymerase alpha subunit [Oenothera argi...   193   2e-47
ref|NP_084725.2| RNA polymerase alpha subunit [Oenothera elata s...   193   2e-47
ref|YP_001542479.1| RNA polymerase alpha subunit [Ceratophyllum ...   189   6e-47
ref|YP_740682.1| RNA polymerase alpha subunit [Nandina domestica...   191   7e-47
gb|AFB74294.1| DNA-directed RNA polymerase subunit alpha, partia...   191   9e-47
gb|AFB74286.1| DNA-directed RNA polymerase subunit alpha, partia...   191   9e-47
gb|ADM14339.1| RNA polymerase alpha subunit [Punica granatum]         191   9e-47
ref|YP_009000206.1| RNA polymerase alpha subunit (chloroplast) [...   188   9e-47
gb|AFB74288.1| DNA-directed RNA polymerase subunit alpha, partia...   191   1e-46
gb|AFB74285.1| DNA-directed RNA polymerase subunit alpha, partia...   191   1e-46
gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidops...   190   2e-46
gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]     190   2e-46
gb|AFB74291.1| DNA-directed RNA polymerase subunit alpha, partia...   190   2e-46
ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus mac...   190   2e-46

>ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus]
           gi|161622341|ref|YP_001586213.1| RNA polymerase alpha
           subunit [Acorus americanus]
           gi|90101572|sp|Q3V502.1|RPOA_ACOCL RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|69215818|gb|AAZ03865.1| RNA polymerase alpha chain
           [Acorus americanus] gi|74381741|emb|CAI53826.1| RNA
           polymerase alpha subunit [Acorus calamus]
           gi|160369884|gb|ABX38775.1| RNA polymerase alpha subunit
           [Acorus americanus]
          Length = 337

 Score =  192 bits (488), Expect(2) = 2e-48
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP +KGQADTIGIA+RRALLGEIEGTCIT  K EK+PHEYSTI GIEESVHEILMNLK
Sbjct: 33  ILSPLLKGQADTIGIAMRRALLGEIEGTCITRAKSEKVPHEYSTIAGIEESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGT DAS+CV+GPRCVTAQDIISPPSVE+VDTTQHIASL
Sbjct: 93  EIVLRSNLYGTRDASICVRGPRCVTAQDIISPPSVEVVDTTQHIASL 139



 Score = 26.2 bits (56), Expect(2) = 2e-48
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 72  RADSE*LYYGHFIIS 116
           RADS+ LYYG FI+S
Sbjct: 21  RADSKRLYYGRFILS 35


>sp|Q5QA74.1|RPOA_ACOGR RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP;
           AltName: Full=Plastid-encoded RNA polymerase subunit
           alpha; Short=RNA polymerase subunit alpha
           gi|56122468|gb|AAV74359.1| RpoA [Acorus gramineus]
          Length = 337

 Score =  192 bits (488), Expect(2) = 2e-48
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP +KGQADTIGIA+RRALLGEIEGTCIT  K EK+PHEYSTI GIEESVHEILMNLK
Sbjct: 33  ILSPLLKGQADTIGIAMRRALLGEIEGTCITRAKSEKVPHEYSTIAGIEESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGT DAS+CV+GPRCVTAQDIISPPSVE+VDTTQHIASL
Sbjct: 93  EIVLRSNLYGTRDASICVRGPRCVTAQDIISPPSVEVVDTTQHIASL 139



 Score = 26.2 bits (56), Expect(2) = 2e-48
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 72  RADSE*LYYGHFIIS 116
           RADS+ LYYG FI+S
Sbjct: 21  RADSKRLYYGRFILS 35


>gb|AFB74290.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Opuntia decumbens]
          Length = 323

 Score =  194 bits (492), Expect(2) = 2e-48
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIG+A+RRALLGEIEGTCIT  KFEKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGVAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CV+GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCEASICVRGPRCVTAQDIILPPYVEIVDNTQHIASL 139



 Score = 24.6 bits (52), Expect(2) = 2e-48
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 72  RADSE*LYYGHFIIS 116
           R DS+ LYYG FI+S
Sbjct: 21  RTDSKCLYYGRFILS 35


>gb|AFB74287.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Didierea madagascariensis]
          Length = 333

 Score =  194 bits (493), Expect = 1e-47
 Identities = 95/107 (88%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  KFEKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CV+GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCEASICVRGPRCVTAQDIILPPYVEIVDNTQHIASL 139


>gb|ADM14340.1| RNA polymerase alpha subunit [Punica granatum]
          Length = 337

 Score =  194 bits (493), Expect = 1e-47
 Identities = 95/107 (88%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  KFEKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CVKGP CVTAQDII PPSVEI+D TQHIASL
Sbjct: 93  EIVLRSNLYGTCNASICVKGPGCVTAQDIILPPSVEIIDNTQHIASL 139


>gb|AFB74292.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Pereskiopsis diguetii]
          Length = 325

 Score =  191 bits (484), Expect(2) = 1e-47
 Identities = 93/107 (86%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIG+A+RRALLGEIEGTCIT  K EKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGVAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CV+GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCEASICVRGPRCVTAQDIILPPYVEIVDNTQHIASL 139



 Score = 24.6 bits (52), Expect(2) = 1e-47
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 72  RADSE*LYYGHFIIS 116
           R DS+ LYYG FI+S
Sbjct: 21  RTDSKCLYYGRFILS 35


>ref|YP_001687169.1| RNA polymerase alpha subunit [Oenothera argillicola]
           gi|169143063|ref|YP_001687483.1| RNA polymerase alpha
           subunit [Oenothera parviflora]
           gi|159792980|gb|ABW98736.1| RNA polymerase alpha subunit
           [Oenothera argillicola] gi|159895589|gb|ABX10153.1| RNA
           polymerase alpha subunit [Oenothera parviflora]
          Length = 366

 Score =  193 bits (491), Expect = 2e-47
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  KFEKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CVKGP CVTAQDI+ PPSVEI+D TQHIASL
Sbjct: 93  EIVLRSNLYGTCNASICVKGPGCVTAQDILLPPSVEIIDNTQHIASL 139


>ref|NP_084725.2| RNA polymerase alpha subunit [Oenothera elata subsp. hookeri]
           gi|169142892|ref|YP_001687315.1| RNA polymerase alpha
           subunit [Oenothera glazioviana]
           gi|169142977|ref|YP_001687399.1| RNA polymerase alpha
           subunit [Oenothera biennis]
           gi|172045760|sp|Q9MTJ3.2|RPOA_OENEH RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|159793150|gb|ABW98904.1| RNA polymerase alpha subunit
           [Oenothera biennis] gi|159895504|gb|ABX10069.1| RNA
           polymerase alpha subunit [Oenothera glazioviana]
           gi|162423699|emb|CAB67191.2| RNA polymerase alpha
           subunit [Oenothera elata subsp. hookeri]
          Length = 366

 Score =  193 bits (491), Expect = 2e-47
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  KFEKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CVKGP CVTAQDI+ PPSVEI+D TQHIASL
Sbjct: 93  EIVLRSNLYGTCNASICVKGPGCVTAQDILLPPSVEIIDNTQHIASL 139


>ref|YP_001542479.1| RNA polymerase alpha subunit [Ceratophyllum demersum]
           gi|172048124|sp|A8SED5.1|RPOA_CERDE RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|148508476|gb|ABQ81483.1| RNA polymerase alpha subunit
           [Ceratophyllum demersum] gi|227481150|emb|CAP62529.1|
           RNA polymerase alpha subunit [Ceratophyllum demersum]
          Length = 337

 Score =  189 bits (479), Expect(2) = 6e-47
 Identities = 93/107 (86%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGI++RRALLGEIEGTCIT  KF+K+ HEYSTIVGIEESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGISMRRALLGEIEGTCITRAKFDKVTHEYSTIVGIEESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGT DAS+CV+GPR VTAQDIISPPSVEIVDTTQHIA+L
Sbjct: 93  EIVLRSNLYGTLDASICVRGPRSVTAQDIISPPSVEIVDTTQHIANL 139



 Score = 24.6 bits (52), Expect(2) = 6e-47
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 72  RADSE*LYYGHFIIS 116
           R DS+ LYYG FI+S
Sbjct: 21  RVDSKRLYYGRFILS 35


>ref|YP_740682.1| RNA polymerase alpha subunit [Nandina domestica]
           gi|122165930|sp|Q09FS9.1|RPOA_NANDO RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|114054503|gb|ABI49896.1| RNA polymerase alpha subunit
           [Nandina domestica]
          Length = 338

 Score =  191 bits (486), Expect = 7e-47
 Identities = 96/107 (89%), Positives = 101/107 (94%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGIEESVHEILMNLK
Sbjct: 33  VLSPLMKGQADTIGIAMRRALLGEIEGTCITHAKSEKIPHEYSTIVGIEESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTCDAS+CVKGP  +TA+DIISPPSVEIVDTTQHIASL
Sbjct: 93  EIVLRSNLYGTCDASICVKGPINITAKDIISPPSVEIVDTTQHIASL 139


>gb|AFB74294.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Pereskia sacharosa]
          Length = 320

 Score =  191 bits (485), Expect = 9e-47
 Identities = 94/107 (87%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CV+GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCEASICVRGPRCVTAQDIILPPYVEIVDNTQHIASL 139


>gb|AFB74286.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Blossfeldia liliputana]
          Length = 329

 Score =  191 bits (485), Expect = 9e-47
 Identities = 94/107 (87%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CV+GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCEASICVRGPRCVTAQDIILPPYVEIVDNTQHIASL 139


>gb|ADM14339.1| RNA polymerase alpha subunit [Punica granatum]
          Length = 337

 Score =  191 bits (485), Expect = 9e-47
 Identities = 94/107 (87%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  KFEKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRS LYGTC+AS+CVKGP CVTAQDII PPSVEI+D TQHIASL
Sbjct: 93  EIVLRSYLYGTCNASICVKGPGCVTAQDIILPPSVEIIDNTQHIASL 139


>ref|YP_009000206.1| RNA polymerase alpha subunit (chloroplast) [Silene paradoxa]
           gi|555944296|gb|AGZ18197.1| RNA polymerase alpha subunit
           (chloroplast) [Silene paradoxa]
          Length = 324

 Score =  188 bits (477), Expect(2) = 9e-47
 Identities = 90/107 (84%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP +KGQADTIGIA+RRALLGE+EGTCIT  K EKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLLKGQADTIGIAMRRALLGEMEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EI+LRSNLYGTC+AS+C++GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIILRSNLYGTCEASICIRGPRCVTAQDIILPPYVEIVDNTQHIASL 139



 Score = 24.6 bits (52), Expect(2) = 9e-47
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 72  RADSE*LYYGHFIIS 116
           R DS+ LYYG FI+S
Sbjct: 21  RTDSKCLYYGRFILS 35


>gb|AFB74288.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Maihuenia poeppigii]
          Length = 331

 Score =  191 bits (484), Expect = 1e-46
 Identities = 93/107 (86%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYST+VGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTVVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CV+GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCEASICVRGPRCVTAQDIILPPYVEIVDNTQHIASL 139


>gb|AFB74285.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Anredera baselloides]
          Length = 335

 Score =  191 bits (484), Expect = 1e-46
 Identities = 93/107 (86%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EI+LRSNLYGTC+AS+CV+GPRCVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIILRSNLYGTCEASICVRGPRCVTAQDIILPPYVEIVDNTQHIASL 139


>gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidopsis corallina]
          Length = 337

 Score =  190 bits (483), Expect = 2e-46
 Identities = 95/107 (88%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTCDAS+CV+GP  VTAQDIISPPSVEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCDASICVRGPGYVTAQDIISPPSVEIVDNTQHIASL 139


>gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]
          Length = 339

 Score =  190 bits (482), Expect = 2e-46
 Identities = 97/107 (90%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGIEESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIEESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGT DAS+CVKGP  VTAQDIISPPSVEIVDTTQHIASL
Sbjct: 93  EIVLRSNLYGTRDASICVKGPGYVTAQDIISPPSVEIVDTTQHIASL 139


>gb|AFB74291.1| DNA-directed RNA polymerase subunit alpha, partial (chloroplast)
           [Portulacaria afra]
          Length = 333

 Score =  190 bits (482), Expect = 2e-46
 Identities = 93/107 (86%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGI+ESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIQESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGTC+AS+CV+GP+CVTAQDII PP VEIVD TQHIASL
Sbjct: 93  EIVLRSNLYGTCEASICVRGPKCVTAQDIILPPYVEIVDNTQHIASL 139


>ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus macranthus]
           gi|158514028|sp|A1XGS0.1|RPOA_RANMC RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|85540836|gb|ABC70788.1| RNA polymerase alpha subunit
           [Ranunculus macranthus]
          Length = 346

 Score =  190 bits (482), Expect = 2e-46
 Identities = 97/107 (90%), Positives = 100/107 (93%)
 Frame = +1

Query: 106 LLSPFMKGQADTIGIAIRRALLGEIEGTCITSVKFEKIPHEYSTIVGIEESVHEILMNLK 285
           +LSP MKGQADTIGIA+RRALLGEIEGTCIT  K EKIPHEYSTIVGIEESVHEILMNLK
Sbjct: 33  ILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTIVGIEESVHEILMNLK 92

Query: 286 EIVLRSNLYGTCDASLCVKGPRCVTAQDIISPPSVEIVDTTQHIASL 426
           EIVLRSNLYGT DAS+CVKGP  VTAQDIISPPSVEIVDTTQHIASL
Sbjct: 93  EIVLRSNLYGTRDASICVKGPGYVTAQDIISPPSVEIVDTTQHIASL 139