BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00057344
         (341 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   108   6e-26
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   106   1e-25
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     106   2e-25
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   112   2e-25
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   104   6e-25
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   111   8e-25
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   103   8e-25
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   117   2e-24
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         104   2e-24
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   104   2e-24
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     104   2e-24
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         102   2e-24
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     103   4e-24
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi...   105   5e-24
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     101   5e-24
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]   100   5e-24
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]         100   9e-24
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]        107   9e-24
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   101   1e-23
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...   110   2e-23

>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  108 bits (270), Expect(2) = 6e-26
 Identities = 53/92 (57%), Positives = 66/92 (71%)
 Frame = +2

Query: 5   LLLVETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKE 184
           L   E ++Y EAI+ K+S +W+ AM +E ESL KN TW+LV +PK  K+VG KW FKKK 
Sbjct: 453 LSCAEPKNYLEAISCKDSPKWMTAMQEEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKKL 512

Query: 185 GTPGVEDARFKARLVAKGYTQRECIDYNEVLS 280
           G P VE  RFKA LVAK YTQRE +D+NE+ S
Sbjct: 513 GIPHVEPERFKATLVAKAYTQREGMDFNEIFS 544



 Score = 34.7 bits (78), Expect(2) = 6e-26
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SP+VKH+SIR LLA+V+ +NLE
Sbjct: 543 FSPMVKHTSIRVLLALVSLWNLE 565


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  106 bits (265), Expect(2) = 1e-25
 Identities = 50/88 (56%), Positives = 64/88 (72%)
 Frame = +2

Query: 17   ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
            E  +Y EAI S +  +WI AM DE+ESL KNHTWELVK PK +K +  KW FK+KEG   
Sbjct: 1022 EPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISS 1081

Query: 197  VEDARFKARLVAKGYTQRECIDYNEVLS 280
             ++AR+KARL+AKGY+Q   ID+N+V S
Sbjct: 1082 SDEARYKARLIAKGYSQIPGIDFNDVFS 1109



 Score = 35.4 bits (80), Expect(2) = 1e-25
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 273  YSPVVKHSSIRTLLAIVAHFNLE 341
            +SPVVKHSSIRTLL+IVA  + E
Sbjct: 1108 FSPVVKHSSIRTLLSIVAMHDYE 1130


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  106 bits (264), Expect(2) = 2e-25
 Identities = 51/88 (57%), Positives = 64/88 (72%)
 Frame = +2

Query: 17   ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
            E  +Y EAI S +  +WI AM DE+ESL KNHTWELVK PK +K +  KW FK+KEG   
Sbjct: 787  EPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSP 846

Query: 197  VEDARFKARLVAKGYTQRECIDYNEVLS 280
             ++AR+KARLVAKGY+Q   ID+N+V S
Sbjct: 847  SDEARYKARLVAKGYSQIPGIDFNDVFS 874



 Score = 35.0 bits (79), Expect(2) = 2e-25
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SPVVKHSSIRTLL IVA  + E
Sbjct: 873 FSPVVKHSSIRTLLGIVAMHDYE 895


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  112 bits (279), Expect(2) = 2e-25
 Identities = 52/93 (55%), Positives = 67/93 (72%)
 Frame = +2

Query: 2   ALLLVETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKK 181
           +L L E +SY EA   KE ++W  A  +E++SL KN TW+LV +P N+KI+G +W FK K
Sbjct: 511 SLSLEEPESYQEATQDKEWLKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLK 570

Query: 182 EGTPGVEDARFKARLVAKGYTQRECIDYNEVLS 280
            G PGVE  RFKARLVAKGYTQRE +DY E+ +
Sbjct: 571 SGIPGVEPVRFKARLVAKGYTQREGVDYQEIFA 603



 Score = 29.3 bits (64), Expect(2) = 2e-25
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           ++PVVKH+SIR L+++V   ++E
Sbjct: 602 FAPVVKHTSIRVLMSVVVDQDME 624


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 983

 Score =  104 bits (260), Expect(2) = 6e-25
 Identities = 50/88 (56%), Positives = 62/88 (70%)
 Frame = +2

Query: 17  ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
           E   Y EAI S +  +WI  M DE+ESL KNHTWELVK PK +K +  KW FK+KEG   
Sbjct: 557 EPSIYSEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSP 616

Query: 197 VEDARFKARLVAKGYTQRECIDYNEVLS 280
            ++AR+KARLVAKGY+Q   ID+N+V S
Sbjct: 617 SDEARYKARLVAKGYSQIPSIDFNDVFS 644



 Score = 35.0 bits (79), Expect(2) = 6e-25
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SP+VKHSSIRTLL+IVA  + E
Sbjct: 643 FSPIVKHSSIRTLLSIVAMHDYE 665


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  111 bits (277), Expect(2) = 8e-25
 Identities = 51/91 (56%), Positives = 68/91 (74%)
 Frame = +2

Query: 8    LLVETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEG 187
            ++ E QSY EA+ S++  +W  A  DE++SL KN TW+LV +PK++KI+G +W FK K G
Sbjct: 835  IVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSG 894

Query: 188  TPGVEDARFKARLVAKGYTQRECIDYNEVLS 280
             PGVE  RFKARLVAKGYTQRE +DY E+ +
Sbjct: 895  IPGVEPTRFKARLVAKGYTQREGVDYQEIFA 925



 Score = 28.1 bits (61), Expect(2) = 8e-25
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           ++PVVKH SIR L+++V   +LE
Sbjct: 924 FAPVVKHVSIRILMSLVVDKDLE 946


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score =  103 bits (258), Expect(2) = 8e-25
 Identities = 48/88 (54%), Positives = 64/88 (72%)
 Frame = +2

Query: 17  ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
           E  +Y EAI S +  +WI AM DE++SL KNHTW+LVK PK +K++  KW FK+KEG   
Sbjct: 650 EPSTYSEAIVSDDCNRWITAMHDEMDSLEKNHTWKLVKLPKEKKLIHCKWIFKRKEGMSP 709

Query: 197 VEDARFKARLVAKGYTQRECIDYNEVLS 280
            ++AR+KA LVAKGY+Q   ID+N+V S
Sbjct: 710 TDEARYKAMLVAKGYSQIPGIDFNDVFS 737



 Score = 35.4 bits (80), Expect(2) = 8e-25
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SPVVKHSSIRTLL+IVA  + E
Sbjct: 736 FSPVVKHSSIRTLLSIVAMHDYE 758


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  117 bits (292), Expect = 2e-24
 Identities = 51/89 (57%), Positives = 72/89 (80%)
 Frame = +2

Query: 14   VETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTP 193
            +E ++Y EAI S E+ QW+ A+ +E++SL KN TWELV +PK++K+VGSKW FK+K+GT 
Sbjct: 769  MEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTL 828

Query: 194  GVEDARFKARLVAKGYTQRECIDYNEVLS 280
            G E  R+KARLVAKG++Q+E +DYNE+ S
Sbjct: 829  GNEAPRYKARLVAKGFSQKEGVDYNEIFS 857


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  104 bits (259), Expect(2) = 2e-24
 Identities = 48/89 (53%), Positives = 64/89 (71%)
 Frame = +2

Query: 14   VETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTP 193
            VE   Y EA+  +   +W  AM++EIES  KN TW  V RP+ Q+I+GS+W +K K+G P
Sbjct: 842  VEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIP 901

Query: 194  GVEDARFKARLVAKGYTQRECIDYNEVLS 280
            GVE+ RFKARLVAKGY QRE +DY+E+ +
Sbjct: 902  GVEEPRFKARLVAKGYAQREGVDYHEIFA 930



 Score = 33.5 bits (75), Expect(2) = 2e-24
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           ++PVVKH SIR LL+IVA  NLE
Sbjct: 929 FAPVVKHVSIRILLSIVAQENLE 951


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  104 bits (259), Expect(2) = 2e-24
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = +2

Query: 17   ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
            E  +Y EAI S +  +WI AM DE+ESL KNHTWE VK PK +K +  KW FK+KEG   
Sbjct: 850  EPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSP 909

Query: 197  VEDARFKARLVAKGYTQRECIDYNEVLS 280
             ++AR+KARLVAKGY+Q   ID+N+V S
Sbjct: 910  SDEARYKARLVAKGYSQIPGIDFNDVFS 937



 Score = 33.5 bits (75), Expect(2) = 2e-24
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +3

Query: 273  YSPVVKHSSIRTLLAIVAHFNLE 341
            +SP++KHSSIRTLL IVA  + E
Sbjct: 936  FSPIMKHSSIRTLLGIVAMHDYE 958


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  104 bits (259), Expect(2) = 2e-24
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = +2

Query: 17   ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
            E  +Y EAI S +  +WI AM DE+ESL KNHTWE VK PK +K +  KW FK+KEG   
Sbjct: 850  EPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSP 909

Query: 197  VEDARFKARLVAKGYTQRECIDYNEVLS 280
             ++AR+KARLVAKGY+Q   ID+N+V S
Sbjct: 910  SDEARYKARLVAKGYSQIPGIDFNDVFS 937



 Score = 33.5 bits (75), Expect(2) = 2e-24
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +3

Query: 273  YSPVVKHSSIRTLLAIVAHFNLE 341
            +SP++KHSSIRTLL IVA  + E
Sbjct: 936  FSPIMKHSSIRTLLGIVAMHDYE 958


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  102 bits (254), Expect(2) = 2e-24
 Identities = 49/88 (55%), Positives = 63/88 (71%)
 Frame = +2

Query: 17  ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
           E  +Y EAI S +  +WI AM DE+ESL KNHTWELVK PK +K +  KW FK+K+G   
Sbjct: 597 EPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISP 656

Query: 197 VEDARFKARLVAKGYTQRECIDYNEVLS 280
            ++A +KARLVAKGY+Q   ID+N+V S
Sbjct: 657 SDEAMYKARLVAKGYSQIPGIDFNDVFS 684



 Score = 35.4 bits (80), Expect(2) = 2e-24
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SPVVKHSSIRTLL+IVA  + E
Sbjct: 683 FSPVVKHSSIRTLLSIVAMHDYE 705


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  103 bits (256), Expect(2) = 4e-24
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = +2

Query: 17  ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
           E  +Y EAI S    +WI AM DE+ESL KNHTWELVK PK +K +  KW FK+K+G   
Sbjct: 694 EPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGMSP 753

Query: 197 VEDARFKARLVAKGYTQRECIDYNEVLS 280
            ++AR+KARLVAKGY+Q   ID+N+V S
Sbjct: 754 SDEARYKARLVAKGYSQIPGIDFNDVFS 781



 Score = 33.9 bits (76), Expect(2) = 4e-24
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SPV+KHSSIRTLL+IVA  + E
Sbjct: 780 FSPVLKHSSIRTLLSIVAVHDYE 802


>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  105 bits (263), Expect(2) = 5e-24
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = +2

Query: 14   VETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTP 193
            +E   Y EA  S    +W  AM++E+ES  KNHTW +VKRP++QK++GS+W +K K G P
Sbjct: 812  IEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIP 871

Query: 194  GVEDARFKARLVAKGYTQRECIDYNEVLS 280
            GVE+ RFKARLVAKGY QR+ IDY+E+ +
Sbjct: 872  GVEEGRFKARLVAKGYAQRKGIDYHEIFA 900



 Score = 30.8 bits (68), Expect(2) = 5e-24
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           ++PVVKH SIR L++IVA  +LE
Sbjct: 899 FAPVVKHVSIRILMSIVAQEDLE 921


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  101 bits (251), Expect(2) = 5e-24
 Identities = 48/88 (54%), Positives = 63/88 (71%)
 Frame = +2

Query: 17  ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
           E  +Y +AI S +  +WI AM DE+ESL KNH+WEL K PK +K +  KW FK+KEG   
Sbjct: 724 EPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSP 783

Query: 197 VEDARFKARLVAKGYTQRECIDYNEVLS 280
            ++AR+KARLVAKGY+Q   ID+N+V S
Sbjct: 784 SDEARYKARLVAKGYSQIPGIDFNDVFS 811



 Score = 35.4 bits (80), Expect(2) = 5e-24
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SPVVKHSSIRTLL+IVA  + E
Sbjct: 810 FSPVVKHSSIRTLLSIVAMHDYE 832


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score =  100 bits (249), Expect(2) = 5e-24
 Identities = 43/85 (50%), Positives = 64/85 (75%)
 Frame = +2

Query: 26  SYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPGVED 205
           ++ EAI ++E  +W+GAM +EI+ LHKN TW+LV+ P+ ++ +G KW +KKKE     E 
Sbjct: 163 TFQEAIHNQEKSRWMGAMVEEIQFLHKNQTWDLVEPPEGKRAIGCKWVYKKKEAISKKEG 222

Query: 206 ARFKARLVAKGYTQRECIDYNEVLS 280
            +FKARLVAKGY+QR+ +DY+E+ S
Sbjct: 223 EKFKARLVAKGYSQRKGVDYDEIFS 247



 Score = 36.2 bits (82), Expect(2) = 5e-24
 Identities = 13/23 (56%), Positives = 22/23 (95%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SP+V+H+SIRT+L +VAHF+++
Sbjct: 246 FSPMVRHTSIRTVLGLVAHFDMQ 268


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score =  100 bits (249), Expect(2) = 9e-24
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = +2

Query: 17  ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
           E  +Y EAI S +  +WI AM DE+ESL KNHTWELVK PK +K +  KW FK+KE    
Sbjct: 201 EPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKECISP 260

Query: 197 VEDARFKARLVAKGYTQRECIDYNEVLS 280
            ++A +KARLVAKGY+Q   ID+N+V S
Sbjct: 261 SDEAMYKARLVAKGYSQIPGIDFNDVFS 288



 Score = 35.4 bits (80), Expect(2) = 9e-24
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SPVVKHSSIRTLL+IVA  + E
Sbjct: 287 FSPVVKHSSIRTLLSIVAMHDYE 309


>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
          Length = 494

 Score =  107 bits (268), Expect(2) = 9e-24
 Identities = 51/92 (55%), Positives = 67/92 (72%)
 Frame = +2

Query: 5   LLLVETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKE 184
           L + E QSY EA ++KE  +W  A  +E++SL KN TW LV +PK++KI+G +W FK K 
Sbjct: 66  LSMEEPQSYQEATSNKEWKKWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKS 125

Query: 185 GTPGVEDARFKARLVAKGYTQRECIDYNEVLS 280
           G PGVE  R+KARLVAKGYTQRE +DY E+ +
Sbjct: 126 GIPGVEPVRYKARLVAKGYTQREGVDYQEIFA 157



 Score = 28.1 bits (61), Expect(2) = 9e-24
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           ++PV KH+SIR L+++V   +LE
Sbjct: 156 FAPVAKHTSIRILMSVVVDQDLE 178


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  101 bits (252), Expect(2) = 1e-23
 Identities = 43/88 (48%), Positives = 65/88 (73%)
 Frame = +2

Query: 17   ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
            E ++Y EA+ S E  +W  A  +E++S+ KN TW+++ +P+ ++++G KW FK+K G PG
Sbjct: 822  EPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPG 881

Query: 197  VEDARFKARLVAKGYTQRECIDYNEVLS 280
            VE  R+KARLVAKG++QRE IDY E+ S
Sbjct: 882  VEPPRYKARLVAKGFSQREGIDYQEIFS 909



 Score = 33.5 bits (75), Expect(2) = 1e-23
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +SPVVKH SIR LL+IV  F++E
Sbjct: 908 FSPVVKHVSIRYLLSIVVQFDME 930


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score =  110 bits (275), Expect(2) = 2e-23
 Identities = 49/88 (55%), Positives = 67/88 (76%)
 Frame = +2

Query: 17  ETQSYHEAITSKESIQWIGAMSDEIESLHKNHTWELVKRPKNQKIVGSKWAFKKKEGTPG 196
           E +SY EA+ S +  QW  AM +E++S  K+HTW+L+++P+ QK++G KW FK K G PG
Sbjct: 732 EPKSYEEALKSSKRKQWENAMKEEMDSHKKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPG 791

Query: 197 VEDARFKARLVAKGYTQRECIDYNEVLS 280
           VE  R+KARLVAKG++Q+E IDYNEV S
Sbjct: 792 VEKQRYKARLVAKGFSQQEGIDYNEVFS 819



 Score = 24.3 bits (51), Expect(2) = 2e-23
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 273 YSPVVKHSSIRTLLAIVAHFNLE 341
           +S VVKH SIR +L+++ + + E
Sbjct: 818 FSLVVKHVSIRLMLSLMVNMDYE 840