BLASTX nr result

ID: Sinomenium22_contig00057313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00057313
         (312 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006473738.1| PREDICTED: F-box protein SKIP23-like [Citrus...    56   5e-06
ref|XP_006435277.1| hypothetical protein CICLE_v10001350mg [Citr...    56   5e-06

>ref|XP_006473738.1| PREDICTED: F-box protein SKIP23-like [Citrus sinensis]
          Length = 406

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = -3

Query: 310 SELPDDLLRLIAKRLKSTTG---FSGVCRSWRSVAPKKLSHLRHLRPPWLM---QRSQRH 149
           +ELP +L+  I+K+LK  +    F  VCR+WR   PK  +HL   + PWLM    +SQ  
Sbjct: 8   TELPAELIEAISKKLKFYSDYIRFQRVCRNWRLSIPKTPNHLPP-QLPWLMLPQSQSQSQ 66

Query: 148 SHFPCGLFQLDGTMVRQVEIYENG-KERYIGSSGIWLIVVTQNGVI 14
           S   C  F L    V  + + E   + R+ GSS  W+I++ +   I
Sbjct: 67  SQTHCAFFNLSANKVHLLNLPEASLRSRHCGSSHGWVIILDETPAI 112


>ref|XP_006435277.1| hypothetical protein CICLE_v10001350mg [Citrus clementina]
           gi|557537399|gb|ESR48517.1| hypothetical protein
           CICLE_v10001350mg [Citrus clementina]
          Length = 406

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = -3

Query: 310 SELPDDLLRLIAKRLKSTTG---FSGVCRSWRSVAPKKLSHLRHLRPPWLM---QRSQRH 149
           +ELP +L+  I+K+LK  +    F  VCR+WR   PK  +HL   + PWLM    +SQ  
Sbjct: 8   TELPAELIEAISKKLKFYSDYIRFQRVCRNWRLSIPKTPNHLPP-QLPWLMLPQSQSQSQ 66

Query: 148 SHFPCGLFQLDGTMVRQVEIYENG-KERYIGSSGIWLIVVTQNGVI 14
           S   C  F L    V  + + E   + R+ GSS  W+I++ +   I
Sbjct: 67  SQTHCAFFNLSANKVHLLNLPEASLRSRHCGSSHGWVIILDETPAI 112


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