BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00056689
         (298 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007051367.1| Pentatricopeptide repeat-containing protein,...    68   2e-09
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_006444679.1| hypothetical protein CICLE_v10023806mg [Citr...    66   4e-09
ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Caps...    65   8e-09
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                          65   8e-09
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...    65   8e-09
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...    65   8e-09
ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Popu...    64   2e-08
ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutr...    64   3e-08
ref|XP_006386676.1| pentatricopeptide repeat-containing family p...    62   8e-08
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...    60   2e-07
gb|EYU39754.1| hypothetical protein MIMGU_mgv1a001778mg [Mimulus...    59   9e-07
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06

>ref|XP_007051367.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508703628|gb|EOX95524.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 807

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/59 (59%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
 Frame = +3

Query: 120 GRRTLSSALHGTPS-HLENLLLVASVSKTLSDSGTRNLEADSIPLSESLVLQILRRNSI 293
           G  ++SS L  +PS HL N+LL+AS++KTLS+SGTRNL+ +SIP+SE LV+QILR++S+
Sbjct: 7   GLSSVSSPLLKSPSIHLGNILLIASLTKTLSESGTRNLDPNSIPISEPLVIQILRKHSL 65


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 37/61 (60%), Positives = 46/61 (75%)
 Frame = +3

Query: 111 MCHGRRTLSSALHGTPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLVLQILRRNS 290
           M HGR   SSA  G    L ++LLVAS+SKTLS+ GTR+ + +SIP+SESLV+QIL RNS
Sbjct: 1   MRHGRTLSSSAAAGAGVKLGDMLLVASISKTLSERGTRSPDLESIPISESLVVQILGRNS 60

Query: 291 I 293
           I
Sbjct: 61  I 61


>ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Citrus sinensis]
          Length = 790

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = +3

Query: 111 MCHGRRTLSSALHGTPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLVLQILRRNS 290
           M HGR+TLS  ++     L ++LL+A V+KTL +SGTRNL+  SIP+SE LVLQ+L +NS
Sbjct: 1   MRHGRKTLSPPVNSASLQLGSILLLAFVTKTLKESGTRNLDPRSIPISEPLVLQVLGKNS 60

Query: 291 I 293
           +
Sbjct: 61  L 61


>ref|XP_006444679.1| hypothetical protein CICLE_v10023806mg [Citrus clementina]
           gi|557546941|gb|ESR57919.1| hypothetical protein
           CICLE_v10023806mg [Citrus clementina]
          Length = 619

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = +3

Query: 111 MCHGRRTLSSALHGTPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLVLQILRRNS 290
           M HGR+TLS  ++     L ++LL+A V+KTL +SGTRNL+  SIP+SE LVLQ+L +NS
Sbjct: 1   MRHGRKTLSPPVNSASLQLGSILLLAFVTKTLKESGTRNLDPRSIPISEPLVLQVLGKNS 60

Query: 291 I 293
           +
Sbjct: 61  L 61


>ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Capsella rubella]
           gi|482558640|gb|EOA22832.1| hypothetical protein
           CARUB_v10003556mg [Capsella rubella]
          Length = 802

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 8/69 (11%)
 Frame = +3

Query: 111 MCHGRRT--------LSSALHGTPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLV 266
           M HGR +        LS A +     L N+LLVAS+SKTLS SGTR+L+A+SIP+SES+V
Sbjct: 1   MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISESVV 60

Query: 267 LQILRRNSI 293
           LQILRR+SI
Sbjct: 61  LQILRRSSI 69


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 8/69 (11%)
 Frame = +3

Query: 111 MCHGRRT--------LSSALHGTPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLV 266
           M HGR +        LS A +     L N+LLVAS+SKTLS SGTR+L+A+SIP+SE +V
Sbjct: 1   MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60

Query: 267 LQILRRNSI 293
           LQILRRNSI
Sbjct: 61  LQILRRNSI 69


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 8/69 (11%)
 Frame = +3

Query: 111 MCHGRRT--------LSSALHGTPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLV 266
           M HGR +        LS A +     L N+LLVAS+SKTLS SGTR+L+A+SIP+SE +V
Sbjct: 1   MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60

Query: 267 LQILRRNSI 293
           LQILRRNSI
Sbjct: 61  LQILRRNSI 69


>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320808|gb|EFH51230.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 802

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 8/69 (11%)
 Frame = +3

Query: 111 MCHGRRT--------LSSALHGTPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLV 266
           M HGR +        LS A +     L N+LLVAS+SKTLS SGTR L+A+SIP+SE +V
Sbjct: 1   MRHGRGSAVSAAISGLSPATNSPFPQLCNVLLVASLSKTLSQSGTRGLDANSIPISEPVV 60

Query: 267 LQILRRNSI 293
           LQILRRNSI
Sbjct: 61  LQILRRNSI 69


>ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Populus trichocarpa]
           gi|550345304|gb|EEE81962.2| hypothetical protein
           POPTR_0002s18390g [Populus trichocarpa]
          Length = 776

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = +3

Query: 171 NLLLVASVSKTLSDSGTRNLEADSIPLSESLVLQILRRNSI 293
           N+LLVA ++KTLS+SGTR+L+ DSIPLSESLVLQILRRNS+
Sbjct: 3   NILLVAYLTKTLSESGTRSLDPDSIPLSESLVLQILRRNSL 43


>ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutrema salsugineum]
           gi|557097371|gb|ESQ37807.1| hypothetical protein
           EUTSA_v10028437mg [Eutrema salsugineum]
          Length = 801

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/69 (55%), Positives = 53/69 (76%), Gaps = 8/69 (11%)
 Frame = +3

Query: 111 MCHGRRT-LSSALHG-TPSHLE------NLLLVASVSKTLSDSGTRNLEADSIPLSESLV 266
           M HGR + +S+A+ G +P+ +       N+L+VAS+SKTLS SGTRNL+A+S P+SE +V
Sbjct: 1   MRHGRASAVSAAIAGLSPAKIPPFPQLCNVLVVASLSKTLSHSGTRNLDANSTPISEPIV 60

Query: 267 LQILRRNSI 293
           LQILRRNS+
Sbjct: 61  LQILRRNSL 69


>ref|XP_006386676.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550345301|gb|ERP64473.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 776

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = +3

Query: 171 NLLLVASVSKTLSDSGTRNLEADSIPLSESLVLQILRRNSI 293
           N+LLVA ++KTLS+SGTR+L+ DSIPLSE LVLQILRRNS+
Sbjct: 3   NILLVAYLTKTLSESGTRSLDPDSIPLSEYLVLQILRRNSL 43


>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/58 (56%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
 Frame = +3

Query: 123 RRTLSSALHGTPSH-LENLLLVASVSKTLSDSGTRNLEADSIPLSESLVLQILRRNSI 293
           R +L S+L  + S+ LE++LLVA ++K LS+SG RNL+ D IPLSE L+LQILR+NS+
Sbjct: 34  RFSLCSSLSSSSSNQLESILLVAFLNKALSESGVRNLDPDFIPLSEPLILQILRQNSL 91


>gb|EYU39754.1| hypothetical protein MIMGU_mgv1a001778mg [Mimulus guttatus]
          Length = 760

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
 Frame = +3

Query: 126 RTLSSALHGTPSHLENLLLVASVSKTLSDSG---TRNLEADSIPLSESLVLQILRRNSI 293
           ++ + A+ GT S L NLL+VA+++KTLS+ G   +   +ADSIPLSE+LVLQ+LRR S+
Sbjct: 26  KSTNGAVSGTASELGNLLIVAAIAKTLSNPGGIHSLEKDADSIPLSENLVLQVLRRGSL 84


>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
           gi|449523383|ref|XP_004168703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
          Length = 803

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
 Frame = +3

Query: 111 MCHGR-RT--LSSALHG----TPSHLENLLLVASVSKTLSDSGTRNLEADSIPLSESLVL 269
           M HGR RT  LS   H     T SHL +LLL+AS++KTLS+SGTR L+  S+P+S  L+L
Sbjct: 1   MRHGRTRTCFLSIESHSRTASTLSHLSHLLLLASITKTLSESGTRTLQHHSLPISHPLLL 60

Query: 270 QILRRNSI 293
           QIL   S+
Sbjct: 61  QILHSRSL 68