BLASTX nr result
ID: Sinomenium22_contig00056678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00056678
(323 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
emb|CBI17034.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_002525492.1| pentatricopeptide repeat-containing protein,... 117 1e-24
emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera] 117 1e-24
ref|XP_007200169.1| hypothetical protein PRUPE_ppa016573mg [Prun... 117 2e-24
gb|EXB44216.1| Pentatricopeptide repeat-containing protein [Moru... 114 2e-23
gb|EXB44215.1| hypothetical protein L484_002907 [Morus notabilis] 114 2e-23
ref|XP_004292402.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
ref|XP_007157018.1| hypothetical protein PHAVU_002G036600g [Phas... 107 2e-21
ref|XP_006441713.1| hypothetical protein CICLE_v10024266mg [Citr... 107 2e-21
emb|CBI17032.3| unnamed protein product [Vitis vinifera] 105 7e-21
ref|XP_006347001.1| PREDICTED: pentatricopeptide repeat-containi... 105 9e-21
ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containi... 105 9e-21
ref|XP_006478452.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_007015025.1| Tetratricopeptide repeat-like superfamily pr... 102 6e-20
gb|EYU22705.1| hypothetical protein MIMGU_mgv1a020969mg [Mimulus... 101 1e-19
ref|XP_004233974.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|NP_177298.1| pentatricopeptide repeat-containing protein [Ar... 100 2e-19
dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana] 100 2e-19
ref|XP_004511470.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 117 bits (294), Expect = 1e-24
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
Frame = +1
Query: 4 SVISSCNRER--GRQVHGLALKTCFDACVYAGNALISMYSKSSD--NDALSVFESMPTRN 171
SVIS+C + GRQVH LALKT FD+CVY GNALI MY KS ++A +V+E+M RN
Sbjct: 170 SVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRN 229
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLC 312
L++WNSMIAGF + G R LE FS MH GI FDR+TLVS+ + LC
Sbjct: 230 LVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLC 276
>emb|CBI17034.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 117 bits (294), Expect = 1e-24
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
Frame = +1
Query: 4 SVISSCNRER--GRQVHGLALKTCFDACVYAGNALISMYSKSSD--NDALSVFESMPTRN 171
SVIS+C + GRQVH LALKT FD+CVY GNALI MY KS ++A +V+E+M RN
Sbjct: 14 SVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRN 73
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLC 312
L++WNSMIAGF + G R LE FS MH GI FDR+TLVS+ + LC
Sbjct: 74 LVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLC 120
>ref|XP_002525492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535171|gb|EEF36850.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 542
Score = 117 bits (294), Expect = 1e-24
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 SVISSCNRERGRQVHGLALKTCFDACVYAGNALISMYSKSSDND--ALSVFESMPTRNLI 177
S +SSC+ + G+QVH LA K DA VY GN LISMYS + D+D A SVF ++ RNL+
Sbjct: 171 SNLSSCDYDHGKQVHALAFKMGLDATVYIGNTLISMYSNNGDSDDEAWSVFANLEYRNLV 230
Query: 178 TWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASL 309
+WNSMIAGF +R L + + FS MHR+GIGFDR+TL+SV++SL
Sbjct: 231 SWNSMIAGFQVRKLGAKAISLFSQMHRDGIGFDRATLLSVLSSL 274
>emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera]
Length = 558
Score = 117 bits (294), Expect = 1e-24
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
Frame = +1
Query: 4 SVISSCNRER--GRQVHGLALKTCFDACVYAGNALISMYSKSSD--NDALSVFESMPTRN 171
SVIS+C + GRQVH LALKT FD+CVY GNALI MY KS ++A +V+E+M RN
Sbjct: 45 SVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRN 104
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLC 312
L++WNSMIAGF + G R LE FS MH GI FDR+TLVS+ + LC
Sbjct: 105 LVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLC 151
>ref|XP_007200169.1| hypothetical protein PRUPE_ppa016573mg [Prunus persica]
gi|462395569|gb|EMJ01368.1| hypothetical protein
PRUPE_ppa016573mg [Prunus persica]
Length = 755
Score = 117 bits (292), Expect = 2e-24
Identities = 64/118 (54%), Positives = 80/118 (67%), Gaps = 12/118 (10%)
Frame = +1
Query: 4 SVISSCNRER---GRQVHGLALKTCFDACVYAGNALISMYSKS---------SDNDALSV 147
SV+SSC GRQVH LALK DACVY NALI+MYSK S ++A +V
Sbjct: 171 SVLSSCAESDVGYGRQVHALALKMSLDACVYVANALITMYSKICNHGGVYDVSKDEAWNV 230
Query: 148 FESMPTRNLITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRSN 321
F+SM RNLI+WNSMIAGF RGL + + F M+ +G GFDR+TL+SV++S+CRSN
Sbjct: 231 FKSMEFRNLISWNSMIAGFQYRGLGAQAIHLFIQMYLDGNGFDRATLLSVLSSMCRSN 288
>gb|EXB44216.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 822
Score = 114 bits (284), Expect = 2e-23
Identities = 60/109 (55%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Frame = +1
Query: 4 SVISSCNRERGR---QVHGLALKTCFDACVYAGNALISMYSKS-SDNDALSVFESMPTRN 171
SV+SSC GR QVH LALK C DAC+Y N LI MY+K N+A SVF SM RN
Sbjct: 176 SVLSSCREGEGRFGRQVHALALKMCLDACLYVANTLIMMYNKCHGGNEAWSVFNSMEYRN 235
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRS 318
+TWNSMIA F GL R ++ F MH GI FDR+TL+SV S C S
Sbjct: 236 TVTWNSMIAAFQFHGLGARGIDLFIQMHHMGISFDRATLLSVFTSFCES 284
>gb|EXB44215.1| hypothetical protein L484_002907 [Morus notabilis]
Length = 741
Score = 114 bits (284), Expect = 2e-23
Identities = 60/109 (55%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Frame = +1
Query: 4 SVISSCNRERGR---QVHGLALKTCFDACVYAGNALISMYSKS-SDNDALSVFESMPTRN 171
SV+SSC GR QVH LALK C DAC+Y N LI MY+K N+A SVF SM RN
Sbjct: 176 SVLSSCREGEGRFGRQVHALALKMCLDACLYVANTLIMMYNKCHGGNEAWSVFNSMEYRN 235
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRS 318
+TWNSMIA F GL R ++ F MH GI FDR+TL+SV S C S
Sbjct: 236 TVTWNSMIAAFQFHGLGARGIDLFIQMHHMGISFDRATLLSVFTSFCES 284
>ref|XP_004292402.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Fragaria vesca subsp. vesca]
Length = 792
Score = 108 bits (269), Expect = 1e-21
Identities = 62/114 (54%), Positives = 75/114 (65%), Gaps = 8/114 (7%)
Frame = +1
Query: 4 SVISSCNRE--RGRQVHGLALKTCFDACVYAGNALISMYSK------SSDNDALSVFESM 159
SV+SSC E RGRQVH LALK DA Y NALI+MYSK S +DA VF +M
Sbjct: 212 SVLSSCAAETVRGRQVHALALKMSLDASTYVANALITMYSKGGVCDVSRHDDAWKVFTTM 271
Query: 160 PTRNLITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRSN 321
+RNLI+WNSMIAGF RGL + + F MH +G+ DR+TL+SV +SL R N
Sbjct: 272 ESRNLISWNSMIAGFQCRGLGAQAILLFVQMHLDGLESDRATLLSVFSSLNRVN 325
>ref|XP_007157018.1| hypothetical protein PHAVU_002G036600g [Phaseolus vulgaris]
gi|561030433|gb|ESW29012.1| hypothetical protein
PHAVU_002G036600g [Phaseolus vulgaris]
Length = 767
Score = 107 bits (267), Expect = 2e-21
Identities = 59/114 (51%), Positives = 78/114 (68%), Gaps = 12/114 (10%)
Frame = +1
Query: 4 SVISSCNR---ERGRQVHGLALKTCFDACVYAGNALISMYSKSSDN---------DALSV 147
S++S+C ERG Q+H +ALK DA VY NALI+MYSK S + DA ++
Sbjct: 182 SLLSACEEHDIERGIQLHAVALKISLDANVYVANALIAMYSKHSGSTGGYDGAADDAWTM 241
Query: 148 FESMPTRNLITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASL 309
F+SM RNLI+WNSMIAGF LRGL + + F++M+ GIGFDR+TL+SV +SL
Sbjct: 242 FKSMEYRNLISWNSMIAGFQLRGLGDKAIRLFTHMYCNGIGFDRATLLSVFSSL 295
>ref|XP_006441713.1| hypothetical protein CICLE_v10024266mg [Citrus clementina]
gi|557543975|gb|ESR54953.1| hypothetical protein
CICLE_v10024266mg [Citrus clementina]
Length = 717
Score = 107 bits (267), Expect = 2e-21
Identities = 57/105 (54%), Positives = 72/105 (68%)
Frame = +1
Query: 4 SVISSCNRERGRQVHGLALKTCFDACVYAGNALISMYSKSSDNDALSVFESMPTRNLITW 183
SV+ SC+ G+ VH LALK DA VY NALI+MYSKS ++A VFE+M RN+I+W
Sbjct: 172 SVLISCDYLHGKLVHALALKFSLDAHVYVSNALINMYSKSCADEAWKVFENMEFRNVISW 231
Query: 184 NSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRS 318
NSMIA F L + +E F+ M EGIGFDR+TL+SV+ SL S
Sbjct: 232 NSMIAAFRACKLEAQAIELFAKMKNEGIGFDRATLLSVLTSLSGS 276
>emb|CBI17032.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 105 bits (262), Expect = 7e-21
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
Frame = +1
Query: 4 SVISSCNRER--GRQVHGLALKTCFDACVYAGNALISMYSKS--SDNDALSVFESMPTRN 171
SVIS+ + GRQVH LA+KT FD+CVY GN LI MY +S ++A +V+E+M RN
Sbjct: 160 SVISTSGGDGDCGRQVHALAVKTSFDSCVYVGNVLIMMYCRSCGGTDEAWNVYEAMGFRN 219
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLC 312
L++WN MI GF + G R LE FS MH GI FDR+TLV++ + LC
Sbjct: 220 LVSWNFMITGFQVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCLC 266
>ref|XP_006347001.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Solanum tuberosum]
Length = 607
Score = 105 bits (261), Expect = 9e-21
Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
Frame = +1
Query: 4 SVISSCNRE--RGRQVHGLALKTCFDACVYAGNALISMYSKSS-DNDALSVFESMPTRNL 174
SV+S C+ RGRQVH L +KT FD CVY NALI+MYS++S +A VF M RN+
Sbjct: 161 SVLSVCDTSTSRGRQVHALVMKTGFDTCVYVCNALIAMYSRNSGSTEAWKVFNDMEFRNI 220
Query: 175 ITWNSMIAGFLLRGLVGRCLEFFSYMHREG-IGFDRSTLVSVIASL 309
++WN+MIA F + G + + FFS MHR+ +GFDR+TLVSV++SL
Sbjct: 221 VSWNTMIALFQICGQGDKAMRFFSLMHRDSCLGFDRATLVSVLSSL 266
>ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
gi|449503335|ref|XP_004161951.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
Length = 629
Score = 105 bits (261), Expect = 9e-21
Identities = 56/103 (54%), Positives = 69/103 (66%), Gaps = 10/103 (9%)
Frame = +1
Query: 28 ERGRQVHGLALKTCFDACVYAGNALISMYSK----------SSDNDALSVFESMPTRNLI 177
ERGRQ+HG ALK DA VY NALI+MYSK S D+DA ++F+SM +LI
Sbjct: 56 ERGRQIHGFALKISLDAFVYVANALITMYSKICSEDGAFKDSKDDDAWTMFKSMENPSLI 115
Query: 178 TWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIAS 306
TWNSMIAGF R L + + F M+R GIGFDR+TLVS ++S
Sbjct: 116 TWNSMIAGFCFRKLGHQAIYLFMQMNRHGIGFDRATLVSTLSS 158
>ref|XP_006478452.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Citrus sinensis]
Length = 744
Score = 104 bits (260), Expect = 1e-20
Identities = 56/105 (53%), Positives = 71/105 (67%)
Frame = +1
Query: 4 SVISSCNRERGRQVHGLALKTCFDACVYAGNALISMYSKSSDNDALSVFESMPTRNLITW 183
SV+ SC+ G+ VH LALK DA VY NALI+MYSKS ++A VFE+M RN+I+W
Sbjct: 172 SVLISCDYLHGKLVHALALKFSLDAHVYVANALINMYSKSCADEAWKVFENMEFRNVISW 231
Query: 184 NSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRS 318
NSMIA F L + +E F+ M EG GFDR+TL+SV+ SL S
Sbjct: 232 NSMIAAFRACKLEAQAIELFAKMKNEGNGFDRATLLSVLTSLSGS 276
>ref|XP_007015025.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508785388|gb|EOY32644.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 741
Score = 102 bits (254), Expect = 6e-20
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Frame = +1
Query: 4 SVISSCNRERGRQVHGLALKTCFDACVYAGNALISMYSKSSD-NDALSVFESMPTRNLIT 180
SV+SSC+ RG+QVH L K DA VY NALI+MYSKS +A ++F+SM +L++
Sbjct: 168 SVLSSCDCFRGKQVHALESKMGLDASVYVANALITMYSKSYKIEEAWTLFKSMHYWSLVS 227
Query: 181 WNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRSN 321
WNSMIAGF L L + + F+ MH GIGFDR+TL+SV +SLC S+
Sbjct: 228 WNSMIAGFQLAKLGMQGIGVFAKMHDVGIGFDRATLLSVFSSLCGSS 274
>gb|EYU22705.1| hypothetical protein MIMGU_mgv1a020969mg [Mimulus guttatus]
Length = 663
Score = 101 bits (252), Expect = 1e-19
Identities = 54/109 (49%), Positives = 77/109 (70%), Gaps = 3/109 (2%)
Frame = +1
Query: 4 SVISSCNRERGRQVHGLALKTCFDACVYAGNALISMYSKSSDN---DALSVFESMPTRNL 174
S++S C+ RG QVHGLAL+T FDA +Y NAL++MY K+S N DA +F++M RNL
Sbjct: 85 SLLSVCDYWRGLQVHGLALRTGFDAWIYVANALMAMYWKNSCNPSRDAWRLFDAMEFRNL 144
Query: 175 ITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRSN 321
+T+NSMIAG ++ + + F M R+GI FDR+TL+S+++SLC N
Sbjct: 145 VTYNSMIAGLGMQEQGDKAMTLFIRMLRDGIVFDRTTLLSLVSSLCGPN 193
>ref|XP_004233974.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Solanum lycopersicum]
Length = 540
Score = 101 bits (252), Expect = 1e-19
Identities = 55/107 (51%), Positives = 75/107 (70%), Gaps = 5/107 (4%)
Frame = +1
Query: 4 SVISSCN---RERGRQVHGLALKTCFDACVYAGNALISMYSKSSDND-ALSVFESMPTRN 171
SV+S C+ RGRQVH L +KT F CVY NALI+MYS+++ +D A VF M RN
Sbjct: 40 SVLSVCDCSSSSRGRQVHALVVKTGFHTCVYVCNALIAMYSRNAGSDEAWKVFNDMEFRN 99
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREG-IGFDRSTLVSVIASL 309
+++WN+MIA F + G + + FFS MHR+ +GFDR+TLVSV++SL
Sbjct: 100 IVSWNTMIALFQMCGQGDKAMSFFSSMHRDSCLGFDRATLVSVLSSL 146
>ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g71420 gi|12323734|gb|AAG51830.1|AC016163_19
hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 100 bits (249), Expect = 2e-19
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 SVISSCNRERGRQVHGLALKTCFDACVYAGNALISMYSKSSDN----DALSVFESMPTRN 171
SV++SC E G+QVHGLALK +Y NA+ISMY + D +A +VFE++ +N
Sbjct: 166 SVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKN 225
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRSN 321
L+TWNSMIA F L + + F MH +G+GFDR+TL+++ +SL +S+
Sbjct: 226 LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSS 275
>dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 100 bits (249), Expect = 2e-19
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 SVISSCNRERGRQVHGLALKTCFDACVYAGNALISMYSKSSDN----DALSVFESMPTRN 171
SV++SC E G+QVHGLALK +Y NA+ISMY + D +A +VFE++ +N
Sbjct: 166 SVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKN 225
Query: 172 LITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASLCRSN 321
L+TWNSMIA F L + + F MH +G+GFDR+TL+++ +SL +S+
Sbjct: 226 LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSS 275
>ref|XP_004511470.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cicer arietinum]
Length = 767
Score = 99.8 bits (247), Expect = 4e-19
Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 13/115 (11%)
Frame = +1
Query: 4 SVISSCNR---ERGRQVHGLALKTCFDACVYAGNALISMYSKSS----------DNDALS 144
SV+S C + E G QVH +ALK D VY NALI+MYSK S +DA +
Sbjct: 179 SVLSVCEQRDIEYGLQVHAVALKMSLDVNVYVANALITMYSKCSGGFGGGYNQTSDDAWA 238
Query: 145 VFESMPTRNLITWNSMIAGFLLRGLVGRCLEFFSYMHREGIGFDRSTLVSVIASL 309
VF+SM RNLI+WNSMI+GF RGL + + F+YM+ GIGF+ +TL+ V++SL
Sbjct: 239 VFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAYMYSNGIGFNCATLLGVLSSL 293