BLASTX nr result
ID: Sinomenium22_contig00056492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00056492
(286 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007015858.1| Tetratricopeptide repeat (TPR)-like superfam... 62 1e-07
gb|ADE76509.1| unknown [Picea sitchensis] 62 1e-07
ref|XP_006489632.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_006489631.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_006420340.1| hypothetical protein CICLE_v10004631mg [Citr... 61 1e-07
gb|ACE80804.1| pentatricopeptide repeat protein [Cycas revoluta] 61 2e-07
ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_007035253.1| Tetratricopeptide repeat-like superfamily pr... 60 2e-07
ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_007216398.1| hypothetical protein PRUPE_ppa022530mg [Prun... 60 3e-07
gb|ABK26521.1| unknown [Picea sitchensis] 60 3e-07
ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily p... 60 4e-07
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_007022731.1| Pentatricopeptide repeat superfamily protein... 59 5e-07
ref|XP_004293078.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
emb|CBI29560.3| unnamed protein product [Vitis vinifera] 59 5e-07
emb|CBI18837.3| unnamed protein product [Vitis vinifera] 59 5e-07
>ref|XP_007015858.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508786221|gb|EOY33477.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 875
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
AA G W++ KVRKLME R+VRK+PG SW++VK +TH FLA
Sbjct: 717 AATGNWQERTKVRKLMEKRKVRKEPGYSWIEVKNKTHSFLA 757
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFL 165
AAAGRW+DV KVRK+M+DR V+K PG SW++VK + H F+
Sbjct: 88 AAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFM 127
>ref|XP_006489632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like isoform X2 [Citrus sinensis]
Length = 574
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
+ GRW++V +VRK+M+DRRVRK+ G SW++VKG+ HVFLA
Sbjct: 416 SGVGRWDEVAEVRKVMKDRRVRKEGGRSWIEVKGKVHVFLA 456
>ref|XP_006489631.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like isoform X1 [Citrus sinensis]
Length = 575
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
+ GRW++V +VRK+M+DRRVRK+ G SW++VKG+ HVFLA
Sbjct: 416 SGVGRWDEVAEVRKVMKDRRVRKEGGRSWIEVKGKVHVFLA 456
>ref|XP_006420340.1| hypothetical protein CICLE_v10004631mg [Citrus clementina]
gi|557522213|gb|ESR33580.1| hypothetical protein
CICLE_v10004631mg [Citrus clementina]
Length = 575
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
+ GRW++V +VRK+M+DRRVRK+ G SW++VKG+ HVFLA
Sbjct: 416 SGVGRWDEVAEVRKVMKDRRVRKEGGRSWIEVKGKVHVFLA 456
>gb|ACE80804.1| pentatricopeptide repeat protein [Cycas revoluta]
Length = 152
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLAARCGR-NAKTAHTGLQRPA 108
AA GRW+D+ KVRKLM +RRV+K PG SW++V + H FL A+ + L+R +
Sbjct: 1 AATGRWDDMEKVRKLMTERRVKKIPGCSWIEVNNKVHAFLVGDTSHPQAQKIYAELERLS 60
Query: 107 GE 102
G+
Sbjct: 61 GQ 62
>ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Solanum tuberosum]
Length = 804
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLAARCGRNAKTAHTGLQ 117
AAAGRW+D KVRKLM D+ V+K+PG SW++V+ HVFL TAH +Q
Sbjct: 646 AAAGRWDDAAKVRKLMRDQGVKKEPGCSWIKVENTVHVFLV------GDTAHPEIQ 695
>ref|XP_007035253.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508714282|gb|EOY06179.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 572
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
+ AGRW++V +VRKLM+DRRV+K+ G SWL+VKG HVF A
Sbjct: 412 SVAGRWDEVAEVRKLMKDRRVKKEGGKSWLEVKGNVHVFWA 452
>ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Solanum lycopersicum]
Length = 804
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLAARCGRNAKTAHTGLQ 117
AAAGRW+D KVRKLM D+ V+K+PG SW++V+ HVFL TAH +Q
Sbjct: 646 AAAGRWDDAAKVRKLMRDQGVKKEPGCSWIKVENTVHVFLV------GDTAHPEIQ 695
>ref|XP_007216398.1| hypothetical protein PRUPE_ppa022530mg [Prunus persica]
gi|462412548|gb|EMJ17597.1| hypothetical protein
PRUPE_ppa022530mg [Prunus persica]
Length = 689
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFL 165
AA GRW+DV KVRKLM DR V+K+PG SW+ V+ HVFL
Sbjct: 531 AAIGRWDDVAKVRKLMRDRGVKKEPGCSWIDVENMVHVFL 570
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFL 165
AAAGRW+D KVRK+M+DR V+K+PG SW++V+ + H F+
Sbjct: 212 AAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFI 251
>ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508713722|gb|EOY05619.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 788
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFL 165
A AGRW+DV K RKLM DR V K+PG SW++V+ + HVFL
Sbjct: 630 ATAGRWDDVAKTRKLMRDRGVHKEPGCSWVEVENKVHVFL 669
>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFL 165
A GRW+DV KVRKLM D+ V+K+PG SW++V+ + HVFL
Sbjct: 641 ATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFL 680
>ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Oryza brachyantha]
Length = 749
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFL 165
+AAGRW D +VRKLM DR V+K+PG SW++V +THVFL
Sbjct: 591 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKTHVFL 630
>ref|XP_007022731.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508722359|gb|EOY14256.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 616
Score = 59.3 bits (142), Expect = 5e-07
Identities = 22/44 (50%), Positives = 35/44 (79%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLAARC 153
A A RW++V K+RKLM DR ++K+PG+SW++++ THVF++ C
Sbjct: 458 AKAKRWDEVVKIRKLMRDRNIKKEPGVSWIEIRNVTHVFVSEDC 501
>ref|XP_004293078.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Fragaria vesca subsp. vesca]
Length = 872
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/41 (56%), Positives = 35/41 (85%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
AAAG W++ +KVR+LM +R+V+K PG SW++VK +T++FLA
Sbjct: 714 AAAGNWQERDKVRRLMNERKVKKQPGYSWIEVKNKTYIFLA 754
>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 358
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
A+AGRWE+V VRK M DR V+K PG SW++VK R HVF+A
Sbjct: 197 ASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVA 237
>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
A+AGRWE+V VRK M DR V+K PG SW++VK R HVF+A
Sbjct: 558 ASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVA 598
>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
A+AGRWE+V VRK M DR V+K PG SW++VK R HVF+A
Sbjct: 530 ASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVA 570
>emb|CBI18837.3| unnamed protein product [Vitis vinifera]
Length = 1589
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -3
Query: 284 AAAGRWEDVNKVRKLMEDRRVRKDPGLSWLQVKGRTHVFLA 162
A+AGRWE+V VRK M DR V+K PG SW++VK R HVF+A
Sbjct: 184 ASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVA 224