BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00056184
         (444 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...    96   7e-18
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...    96   7e-18
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...    95   9e-18
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...    95   9e-18
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A...    95   1e-17
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ...    95   1e-17
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ...    95   1e-17
emb|CBI40277.3| unnamed protein product [Vitis vinifera]               95   1e-17
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...    95   1e-17
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]    95   1e-17
ref|XP_007157771.1| hypothetical protein PHAVU_002G097400g [Phas...    94   2e-17
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su...    94   2e-17
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su...    94   3e-17
ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prun...    94   3e-17
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...    93   4e-17
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su...    93   4e-17
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su...    93   4e-17
ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi...    93   4e-17
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-...    92   6e-17
gb|AFK41039.1| unknown [Medicago truncatula]                           92   6e-17

>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
           gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 3-like [Citrus
           sinensis] gi|557524889|gb|ESR36195.1| hypothetical
           protein CICLE_v10028849mg [Citrus clementina]
          Length = 319

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI+VLKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 267 IFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
           gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
           family protein [Theobroma cacao]
          Length = 318

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI+VLKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI++LKQKLDAVR +EDTEEAD+QFGELGAHMRGG
Sbjct: 536 IFTVESTGAIKASQLVLNAIEILKQKLDAVRPSEDTEEADDQFGELGAHMRGG 588


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 318

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAIKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
           gi|548856809|gb|ERN14637.1| hypothetical protein
           AMTR_s00038p00194050 [Amborella trichopoda]
          Length = 324

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI+VLKQKLDAVRL+ DTEE DEQFGELGAHMRGG
Sbjct: 270 IFTVESTGAIKASQLVINAIEVLKQKLDAVRLSLDTEEGDEQFGELGAHMRGG 322


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Glycine max]
          Length = 320

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/53 (86%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGA+KASQLV NAI++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 268 IFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 320


>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Glycine max]
          Length = 319

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/53 (86%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGA+KASQLV NAI++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 267 IFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319


>emb|CBI40277.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI VLKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 154 IFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 206


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
           vinifera]
          Length = 318

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI VLKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQLV NAI VLKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_007157771.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
           gi|561031186|gb|ESW29765.1| hypothetical protein
           PHAVU_002G097400g [Phaseolus vulgaris]
          Length = 318

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/53 (86%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIK+SQLV NAI++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAIKSSQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Fragaria vesca subsp. vesca]
          Length = 318

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/53 (86%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQL+ NAI++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAIKASQLLLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Cicer arietinum]
          Length = 319

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 45/53 (84%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGA+KASQL+ NAI++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 267 IFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319


>ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
           gi|462397216|gb|EMJ03015.1| hypothetical protein
           PRUPE_ppa008812mg [Prunus persica]
          Length = 318

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 45/53 (84%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGA+KASQL+ NAI++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum tuberosum]
          Length = 319

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/53 (84%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVE+TGA+KASQLV NAI+VLKQKLDAVRL++DT EAD+QFGELGAHMRGG
Sbjct: 267 IFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Solanum lycopersicum]
          Length = 319

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/53 (84%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVE+TGA+KASQLV NAI+VLKQKLDAVRL++DT EAD+QFGELGAHMRGG
Sbjct: 267 IFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Cucumis sativus]
          Length = 320

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGAIKASQL+ NAI +LKQKLDAVRL++DT EAD+QFGELGAHMRGG
Sbjct: 268 IFTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG 320


>ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata]
           gi|297329735|gb|EFH60154.1| RBP36A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 319

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGA+KASQLV NAI +LKQKLDAVRL++DT EAD+QFGELGAHMRGG
Sbjct: 267 IFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319


>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
           gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
           [Medicago truncatula] gi|355508950|gb|AES90092.1|
           DNA-directed RNA polymerase II subunit RPB3-A [Medicago
           truncatula]
          Length = 318

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 44/53 (83%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGA+KASQL+ N+I++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAVKASQLLLNSIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>gb|AFK41039.1| unknown [Medicago truncatula]
          Length = 318

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 44/53 (83%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   IFTVESTGAIKASQLVTNAIQVLKQKLDAVRLTEDTEEADEQFGELGAHMRGG 161
           IFTVESTGA+KASQL+ N+I++LKQKLDAVRL+EDT EAD+QFGELGAHMRGG
Sbjct: 266 IFTVESTGAVKASQLLLNSIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318