BLASTX nr result
ID: Sinomenium22_contig00056183
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00056183
(355 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007023261.1| Tetratricopeptide repeat-like superfamily pr... 58 5e-11
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr... 56 4e-10
ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi... 57 5e-10
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi... 60 7e-10
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi... 60 7e-10
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi... 60 7e-10
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas] 64 7e-10
emb|CBI33742.3| unnamed protein product [Vitis vinifera] 60 7e-10
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,... 54 1e-09
gb|EXB57565.1| hypothetical protein L484_022672 [Morus notabilis] 53 2e-09
ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-09
ref|XP_006305855.1| hypothetical protein CARUB_v10010934mg [Caps... 58 2e-09
emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera] 51 2e-09
ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prun... 54 2e-09
ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containi... 51 2e-09
emb|CBI39683.3| unnamed protein product [Vitis vinifera] 51 2e-09
gb|EYU26180.1| hypothetical protein MIMGU_mgv1a024509mg, partial... 54 2e-09
ref|XP_007226519.1| hypothetical protein PRUPE_ppa025518mg [Prun... 67 3e-09
ref|XP_002311462.1| pentatricopeptide repeat-containing family p... 52 4e-09
ref|XP_002529617.1| pentatricopeptide repeat-containing protein,... 62 4e-09
>ref|XP_007023261.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508778627|gb|EOY25883.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 539
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ ++ KC IK+A ++F M K+D+++W ++IGGLA+HG+ DAL
Sbjct: 285 GNALIDLYAKCGMIKNAVDMFKSMDKKDLISWNTIIGGLAMHGHGADAL 333
Score = 35.0 bits (79), Expect(2) = 5e-11
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
+ L CA LGALD+G +++ AE + NV VG+ L
Sbjct: 251 VTVLSACAKLGALDLGKWVHVYAENNGYKGNVYVGNAL 288
>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 52.8 bits (125), Expect(2) = 4e-10
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ + +K I+ AR IF+ M +RDV+TW MIGG ++HG AR+AL
Sbjct: 503 GNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREAL 551
Score = 37.0 bits (84), Expect(2) = 4e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
IN L C HLGALD+G +IY A + V ++ VG+ L
Sbjct: 469 INLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNAL 506
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = +1
Query: 211 TALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDA 351
TALV ++ KC IKDAR++FD MS+RDV++W++MIG +G +A
Sbjct: 403 TALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEA 449
>ref|XP_001761392.1| predicted protein [Physcomitrella patens]
gi|162687398|gb|EDQ73781.1| predicted protein
[Physcomitrella patens]
Length = 833
Score = 52.8 bits (125), Expect(2) = 5e-10
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ + K ++ AR IFD M +RDV+TW +MIGG ++HG AR+AL
Sbjct: 499 GNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREAL 547
Score = 36.6 bits (83), Expect(2) = 5e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
IN L C HLGALD+G +IY A + V +V +G+ L
Sbjct: 465 INLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNAL 502
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = +1
Query: 211 TALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDA 351
TALV ++ KC IKDAR++FD M +RDV++W++MIG +GY +A
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEA 445
>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 60.5 bits (145), Expect(2) = 7e-10
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
GT+L+ ++ +C + ARE+FD M +R+V+TWT+MI G +HGY R A+
Sbjct: 328 GTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAM 376
Score = 28.5 bits (62), Expect(2) = 7e-10
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L C+ LGALD G ++ A+ F NV +G L
Sbjct: 294 VSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSL 331
>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 59.7 bits (143), Expect(2) = 7e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
GTALV ++ KC ++DAR +FDK+ +DV+ W SMI G A+HG++++AL
Sbjct: 294 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342
Score = 29.3 bits (64), Expect(2) = 7e-10
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L C LGAL+ G ++ E FNV VG L
Sbjct: 260 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTAL 297
>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 60.5 bits (145), Expect(2) = 7e-10
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
GT+L+ ++ +C + ARE+FD M +R+V+TWT+MI G +HGY R A+
Sbjct: 264 GTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAM 312
Score = 28.5 bits (62), Expect(2) = 7e-10
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L C+ LGALD G ++ A+ F NV +G L
Sbjct: 230 VSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSL 267
>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 63.5 bits (153), Expect(2) = 7e-10
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +1
Query: 211 TALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
TAL+ ++ KC CI+ AREIFD+M +D W+SMI GLAIHG A DAL
Sbjct: 232 TALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDAL 279
Score = 25.4 bits (54), Expect(2) = 7e-10
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEER 182
+ L CA +GALDIG ++ ++R
Sbjct: 197 VGVLSACAMVGALDIGKWVHAYIKKR 222
>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 59.7 bits (143), Expect(2) = 7e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
GTALV ++ KC ++DAR +FDK+ +DV+ W SMI G A+HG++++AL
Sbjct: 228 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 276
Score = 29.3 bits (64), Expect(2) = 7e-10
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L C LGAL+ G ++ E FNV VG L
Sbjct: 194 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTAL 231
>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 515
Score = 53.9 bits (128), Expect(2) = 1e-09
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ ++ KC +++A +F + K+D+++W ++IGGLA+HG A DAL
Sbjct: 397 GNALIDMYAKCGNVENAIVVFKSLDKKDLISWNTLIGGLAVHGRAADAL 445
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
+ L CA LGALD+G +++ A+ + NV +G+ L
Sbjct: 363 VTVLSACARLGALDLGKWVHMYAQSNGYKGNVYIGNAL 400
>gb|EXB57565.1| hypothetical protein L484_022672 [Morus notabilis]
Length = 584
Score = 53.1 bits (126), Expect(2) = 2e-09
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ ++ KC + AR +FD M KRDV+TW SM+ G HG ++A+
Sbjct: 259 GNALINMYAKCGNLDAARSVFDSMIKRDVLTWNSMVVGYGGHGLGKEAI 307
Score = 34.7 bits (78), Expect(2) = 2e-09
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
+ L CAH+GA +IG +++ +A +R F+ NV VG+ L
Sbjct: 225 VGLLSSCAHVGAQNIGVEMHRMACKREFLRNVFVGNAL 262
>ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cicer arietinum]
Length = 576
Score = 59.7 bits (143), Expect(2) = 2e-09
Identities = 23/48 (47%), Positives = 36/48 (75%)
Frame = +1
Query: 211 TALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
TAL+ ++ KC C++ AR++FD++ RDV WT+MI GLA HG ++A+
Sbjct: 241 TALIDMYSKCGCVESARKVFDEVVDRDVFVWTAMISGLACHGLCKEAI 288
Score = 28.1 bits (61), Expect(2) = 2e-09
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEER 182
I+ L GCA GAL +G K++ + +E+
Sbjct: 206 ISVLRGCADSGALSVGRKVHGIVKEK 231
>ref|XP_006305855.1| hypothetical protein CARUB_v10010934mg [Capsella rubella]
gi|482574566|gb|EOA38753.1| hypothetical protein
CARUB_v10010934mg [Capsella rubella]
Length = 574
Score = 58.2 bits (139), Expect(2) = 2e-09
Identities = 22/49 (44%), Positives = 38/49 (77%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
GT L+ ++ KC C+++A +F+++ +++V TWT+MI GLA HG+AR A+
Sbjct: 344 GTTLIDLYAKCGCLEEAILVFERLPEKNVYTWTAMINGLAAHGHARGAV 392
Score = 29.6 bits (65), Expect(2) = 2e-09
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 114 LCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
L CAH+GAL +G +++ + N T+G L
Sbjct: 313 LSACAHVGALHLGRRVHCYVIKNSIEINTTMGTTL 347
>emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 50.8 bits (120), Expect(3) = 2e-09
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ ++ KC + A IF+ M KRDV TW SMI G +HG +A+
Sbjct: 640 GNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAI 688
Score = 35.4 bits (80), Expect(3) = 2e-09
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L CAH+GAL +G +++ A ER V N+ VG+ L
Sbjct: 606 VSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNAL 643
Score = 20.8 bits (42), Expect(3) = 2e-09
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +2
Query: 2 ELAGRVFNKIHSMDIGAWNA 61
E A +VF ++ + D+ +WN+
Sbjct: 553 ETAHKVFEEMPARDLVSWNS 572
>ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
gi|462402068|gb|EMJ07625.1| hypothetical protein
PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 53.9 bits (128), Expect(3) = 2e-09
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +1
Query: 211 TALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
T+L+ ++ KC + A E+F+ + +RDV W++MI GLA+HG RDAL
Sbjct: 404 TSLIDMYAKCGDLDKALEVFNSVERRDVFVWSAMIAGLAMHGQGRDAL 451
Score = 29.3 bits (64), Expect(3) = 2e-09
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFN 197
++TL CA LGA+D+G I++ +++ N
Sbjct: 369 VSTLAACAQLGAIDLGGWIHVYIKKQVMKLN 399
Score = 23.9 bits (50), Expect(3) = 2e-09
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 2 ELAGRVFNKIHSMDIGAWN 58
E A RVF + S DI AWN
Sbjct: 315 EEAWRVFAAMPSQDIAAWN 333
>ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 50.8 bits (120), Expect(3) = 2e-09
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ ++ KC + A IF+ M KRDV TW SMI G +HG +A+
Sbjct: 265 GNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAI 313
Score = 35.4 bits (80), Expect(3) = 2e-09
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L CAH+GAL +G +++ A ER V N+ VG+ L
Sbjct: 231 VSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNAL 268
Score = 20.8 bits (42), Expect(3) = 2e-09
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +2
Query: 2 ELAGRVFNKIHSMDIGAWNA 61
E A +VF ++ + D+ +WN+
Sbjct: 178 ETAHKVFEEMPARDLVSWNS 197
>emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 50.8 bits (120), Expect(3) = 2e-09
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
G AL+ ++ KC + A IF+ M KRDV TW SMI G +HG +A+
Sbjct: 247 GNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAI 295
Score = 35.4 bits (80), Expect(3) = 2e-09
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L CAH+GAL +G +++ A ER V N+ VG+ L
Sbjct: 213 VSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNAL 250
Score = 20.8 bits (42), Expect(3) = 2e-09
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +2
Query: 2 ELAGRVFNKIHSMDIGAWNA 61
E A +VF ++ + D+ +WN+
Sbjct: 160 ETAHKVFEEMPARDLVSWNS 179
>gb|EYU26180.1| hypothetical protein MIMGU_mgv1a024509mg, partial [Mimulus
guttatus]
Length = 651
Score = 53.5 bits (127), Expect(3) = 2e-09
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +1
Query: 208 GTALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
GTALV ++ KC IK A ++F ++ R+ +T+T+MIGGLA+HG A+ AL
Sbjct: 391 GTALVDMYAKCGNIKKAIQVFHEIPGRNALTFTAMIGGLALHGDAKHAL 439
Score = 30.4 bits (67), Expect(3) = 2e-09
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
++ L C+ LGALD+G I+ E+ NV +G L
Sbjct: 357 VSCLSACSQLGALDVGIWIHHYIEKHNLFLNVALGTAL 394
Score = 22.7 bits (47), Expect(3) = 2e-09
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 2 ELAGRVFNKIHSMDIGAWNA 61
+LA ++F+K+ D+ WNA
Sbjct: 304 DLARKLFDKMPEKDVVPWNA 323
>ref|XP_007226519.1| hypothetical protein PRUPE_ppa025518mg [Prunus persica]
gi|462423455|gb|EMJ27718.1| hypothetical protein
PRUPE_ppa025518mg [Prunus persica]
Length = 528
Score = 67.0 bits (162), Expect = 3e-09
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Frame = +1
Query: 67 CFREAVDLFQE----LELTHYVVVRILEHWISETRF-------ICLQKRGISCLM*QWGT 213
CF EA+DLF+E + L ++V +L S F + L + GI + + GT
Sbjct: 221 CFNEAIDLFRESKSHVRLKESLLVSVLNACASVGAFEEGKWINLFLNENGIEYGL-ELGT 279
Query: 214 ALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHG 336
AL+ + KC CI+DA+E+F M +DV TW++MI G AI+G
Sbjct: 280 ALIDFYAKCGCIEDAQEVFSMMPSKDVTTWSAMIMGFAING 320
>ref|XP_002311462.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222851282|gb|EEE88829.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 538
Score = 51.6 bits (122), Expect(2) = 4e-09
Identities = 19/47 (40%), Positives = 34/47 (72%)
Frame = +1
Query: 214 ALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
AL+ ++ KC ++ A ++F M +D+++W ++IGGLA+HG+ DAL
Sbjct: 286 ALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADAL 332
Score = 34.7 bits (78), Expect(2) = 4e-09
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
+N L CA LGALD+G +++ AE + NV V + L
Sbjct: 250 VNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNAL 287
>ref|XP_002529617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530902|gb|EEF32762.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 438
Score = 61.6 bits (148), Expect(2) = 4e-09
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +1
Query: 211 TALVGIFLKCWCIKDAREIFDKMSKRDVMTWTSMIGGLAIHGYARDAL 354
TALV ++ KC CI+ A+EIFD M +D W+SMI GLAIHG A DAL
Sbjct: 372 TALVNMYAKCGCIEKAKEIFDYMPVKDSKAWSSMIVGLAIHGLAEDAL 419
Score = 24.6 bits (52), Expect(2) = 4e-09
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 105 INTLCGCAHLGALDIGNKIYLLAEERYFVFNVTVGDCL 218
+ + CA GALDIG I+ ++R ++ + L
Sbjct: 337 VGVISACAMAGALDIGRWIHAYIKKRMIHIDLELNTAL 374