BLASTX nr result
ID: Sinomenium22_contig00056051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00056051
(500 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAZ40333.1| hypothetical protein [Raphanus sativus] 77 2e-12
ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, part... 67 3e-09
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 64 2e-08
gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-... 64 2e-08
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 64 3e-08
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 63 4e-08
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus] 63 4e-08
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 63 4e-08
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 63 4e-08
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 63 4e-08
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 63 4e-08
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-... 63 4e-08
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 63 4e-08
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 63 4e-08
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 63 5e-08
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 63 5e-08
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 63 5e-08
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 63 5e-08
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 63 5e-08
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 62 6e-08
>emb|CAZ40333.1| hypothetical protein [Raphanus sativus]
Length = 785
Score = 77.4 bits (189), Expect = 2e-12
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Frame = +2
Query: 74 FKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQHVRKTTHDXXXXXXXXXXXXXIES 253
F VV ++ PLDL+ P+K R+HGE DFI LQ V K
Sbjct: 632 FCVVYGIVPRGPLDLSTAPDKTRLHGEAIDFITNLQDVHKLAQSHLESATTKYKLAADTK 691
Query: 254 VSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFPGEII-KIYPNAYQLKLPSTICTSN 427
G VW LT + +Y KL ++ P E++ +I PN Y+++LPS + TS+
Sbjct: 692 RCELIFEPGDLVWVYLTKERLPLRDYNKLKSKKLGPVEVVERINPNVYRVRLPSHLRTSD 751
Query: 428 MFNVKHLVPYLGD 466
+FN+KHL P+ GD
Sbjct: 752 VFNIKHLSPFKGD 764
>ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
gi|462418685|gb|EMJ22948.1| hypothetical protein
PRUPE_ppb022800mg, partial [Prunus persica]
Length = 722
Score = 66.6 bits (161), Expect = 3e-09
Identities = 52/157 (33%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQL- 178
WD L AEFA+NN N +T SPF++V V+ P+DLAPLP R F +
Sbjct: 465 WDLILPVAEFAYNNSANRTTGKSPFEIVYGVMPRPPIDLAPLPIDARPSESATTFAEHIR 524
Query: 179 QHVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWA-ILTNDCTTHEYCKLAARNFF 355
Q + +T+ + G YV + H + KL AR+
Sbjct: 525 QKISLSTNTYQLAANTHRRTQDFQE--------GDYVMVRVCPERFPKHSFKKLHARSMG 576
Query: 356 PGEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLG 463
P I+ K+ NAY ++LPS + S +FNV L PY G
Sbjct: 577 PYRILRKLGANAYLVELPSDVHISPIFNVSDLFPYRG 613
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 64.3 bits (155), Expect = 2e-08
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1337 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1396
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1397 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGP 1456
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S+ FNV L PYLG+ ++E SR
Sbjct: 1457 FKVLAKINENAYKIDLPADFRVSSTFNVADLKPYLGE---EDELESR 1500
>gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1223
Score = 63.9 bits (154), Expect = 2e-08
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVE---DFIG 172
W+ L EFA+N + +T +SPF+VV P+D+ PLP R+H + + +FI
Sbjct: 936 WEECLPHVEFAYNRATHSTTKVSPFQVVYGFNPRAPIDILPLPTSERVHNDTKARAEFIL 995
Query: 173 QLQHVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTNDCTTHEYCKLAARNF 352
++ K + + V L G VW L D + +L
Sbjct: 996 KMHESTKLNIENMTEKCRIAGSKGRQEV---KLRPGDLVWLHLRKD----RFPELRKSKL 1048
Query: 353 FPGE------IIKIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
P + KI NAY+L+LP S FN+ L PYLG+ ++E SR
Sbjct: 1049 MPRADGLFKIVEKINDNAYKLELPPEFGVSPTFNISDLKPYLGE---EDELESR 1099
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 63.5 bits (153), Expect = 3e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1043 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1102
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1103 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFADLRKSKLMPRADGP 1162
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 1163 FKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGE---EDELESR 1206
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 63.2 bits (152), Expect = 4e-08
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T PF++V ++ P+DL PLP R++ + + +
Sbjct: 1416 WEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELML 1475
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTNDCTTH-EYCKLAARNFFP 358
+ +TT + + G VW L D + KL R P
Sbjct: 1476 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGP 1535
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY+L+LP+ S FN+ L PYLG+ ++E SR
Sbjct: 1536 FKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGE---EDELESR 1579
>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
Length = 962
Score = 63.2 bits (152), Expect = 4e-08
Identities = 49/154 (31%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
WD LAQAEFA NN+ N ST PF+VV DLA LP + E E + ++Q
Sbjct: 253 WDLALAQAEFAFNNMKNRSTGKCPFEVVYTKQPRLTFDLASLPTTIDTSSEAEKMVEKIQ 312
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTN-DCTTHEYCKLAARNFFP 358
++ + H+ T G V L T Y KL R P
Sbjct: 313 NLHEEVHNHLKESTQSYKKAADRKRRQATFTEGDLVMIHLRKIRFPTGTYNKLKDRQLGP 372
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPY 457
++ KI NAY+++LP + +FNV L Y
Sbjct: 373 FRVLEKIGDNAYRIELPLDLNVHPIFNVADLKQY 406
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 576 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 635
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 636 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGP 695
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 696 FKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGE---EDELESR 739
>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550404|gb|ABA93201.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1297
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1056 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1115
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1116 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGP 1175
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 1176 FKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGE---EDELESR 1219
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1498 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1557
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1558 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRKERFPDLRKSKLMPRADGP 1617
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 1618 FKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLGE---EDELESR 1661
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 607 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 666
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 667 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGP 726
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 727 FKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGE---EDELESR 770
>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1238
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1034 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1093
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1094 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGP 1153
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 1154 FKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGE---EDELESR 1197
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1507 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1566
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1567 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRKERFPDLRKSKLMPRADGP 1626
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 1627 FKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLGE---EDELESR 1670
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 63.2 bits (152), Expect = 4e-08
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T PF++V ++ P+DL PLP R++ + + +
Sbjct: 904 WEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELML 963
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTNDCTTH-EYCKLAARNFFP 358
+ +TT + + G VW L D + KL R P
Sbjct: 964 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGP 1023
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY+L+LP+ S FN+ L PYLG+ ++E SR
Sbjct: 1024 FKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGE---EDELESR 1067
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 62.8 bits (151), Expect = 5e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1126 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1185
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1186 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGP 1245
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 1246 FKVLAKINENAYKIDLPADFGVSLTFNVADLKPYLGE---EDEFESR 1289
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 62.8 bits (151), Expect = 5e-08
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N V + +T LSPF+VV PLDL PLP + R + E ++
Sbjct: 990 WEDCLPHVEFAYNRVVHSTTQLSPFEVVYGFNPITPLDLLPLPLQERANMEATKRADYVK 1049
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ + T + + G VW L D KL P
Sbjct: 1050 KMHEKTKETIERIIQSYAAKANKDRKKMLFQPGELVWVHLRKDRFPEKRKSKLMPHGDGP 1109
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
++ KI NAY++ LP SN FNV L P+ G EE++SR
Sbjct: 1110 FRVLEKITDNAYKIDLPGDYTVSNTFNVVDLSPFF----GTEETDSR 1152
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 62.8 bits (151), Expect = 5e-08
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T PF++V ++ P+DL PLP R++ + + +
Sbjct: 1312 WEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTLERVNFDAKYRAELML 1371
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTNDCTTH-EYCKLAARNFFP 358
+ +TT + + G VW L D + KL R P
Sbjct: 1372 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLPPRADGP 1431
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY+L+LP+ S FN+ L PYLG+ ++E SR
Sbjct: 1432 FQVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGE---EDELESR 1475
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 62.8 bits (151), Expect = 5e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T + PF++V ++ P+DL PLP+ +++ + + +
Sbjct: 1126 WEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELML 1185
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTND-CTTHEYCKLAARNFFP 358
+ +TT + + N G VW L + KL R P
Sbjct: 1186 KLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGP 1245
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY++ LP+ S FNV L PYLG+ ++E SR
Sbjct: 1246 FKVLAKINENAYKIDLPADFGVSLTFNVADLKPYLGE---EDEFESR 1289
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 62.8 bits (151), Expect = 5e-08
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EF++N + +T PF++V ++ P+DL PLP R++ + + +
Sbjct: 1009 WEECLPHVEFSYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKHRAELML 1068
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTNDCTTH-EYCKLAARNFFP 358
+ +TT + + G VW L D + KL R P
Sbjct: 1069 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGNLVWLHLRKDRFPNLRKSKLLPRADGP 1128
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI NAY+L+LP+ S FN+ L PYLG+ ++E SR
Sbjct: 1129 FKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGE---EDELESR 1172
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 62.4 bits (150), Expect = 6e-08
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 WDHKLAQAEFAHNNVWNCSTSLSPFKVVCYVILSCPLDLAPLPNKVRIHGEVEDFIGQLQ 181
W+ L EFA+N + +T PF++V ++ P+DL PLP R++ + + +
Sbjct: 1416 WEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELML 1475
Query: 182 HVRKTTHDXXXXXXXXXXXXXIESVSMWNLTWGAYVWAILTNDCTTH-EYCKLAARNFFP 358
+ +TT + + G VW L D + KL R P
Sbjct: 1476 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGP 1535
Query: 359 GEII-KIYPNAYQLKLPSTICTSNMFNVKHLVPYLGDTSGDEESNSR 496
+++ KI N Y+L+LP+ S FN+ L PYLG+ ++E SR
Sbjct: 1536 FKVLQKINDNTYKLELPADFGVSPTFNIADLKPYLGE---EDELESR 1579