BLASTX nr result
ID: Sinomenium22_contig00056019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00056019
(766 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002836134.1| hypothetical chloroplast RF2 [Megaleranthis ... 86 1e-14
gb|ABQ14933.1| Ycf2 [Saxifraga stolonifera] 85 3e-14
gb|AEZ48753.1| hypothetical chloroplast RF2, partial [Sparganium... 84 7e-14
ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica... 84 7e-14
ref|YP_001123242.1| hypothetical protein ArhiCp064 [Arabis hirsu... 83 9e-14
ref|YP_053198.1| Ycf2 [Nymphaea alba] gi|50346848|ref|YP_053219.... 83 1e-13
gb|ADD30889.1| putative RF2 protein [Ximenia americana] gi|34080... 83 1e-13
ref|XP_006850224.1| hypothetical protein AMTR_s00543p00008950 [A... 82 2e-13
gb|ADD30893.1| putative RF2 protein [Ficus sp. Moore 315] gi|340... 82 2e-13
ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifol... 82 2e-13
ref|YP_762304.1| hypothetical chloroplast RF2 [Morus indica] gi|... 82 2e-13
ref|YP_009019931.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
ref|YP_008993735.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
ref|YP_009000376.1| hypothetical protein BN845_0850 (chloroplast... 82 2e-13
ref|YP_008993907.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
ref|YP_008993821.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
ref|YP_008993649.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
ref|YP_008993391.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
ref|YP_008993219.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) ... 82 2e-13
>ref|YP_002836134.1| hypothetical chloroplast RF2 [Megaleranthis saniculifolia]
gi|229577815|ref|YP_002836151.1| hypothetical
chloroplast RF2 [Megaleranthis saniculifolia]
gi|226933926|gb|ACO92059.1| hypothetical chloroplast RF2
[Megaleranthis saniculifolia]
gi|226933943|gb|ACO92076.1| hypothetical chloroplast RF2
[Megaleranthis saniculifolia]
Length = 2288
Score = 86.3 bits (212), Expect = 1e-14
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADLLTLSITEPDL YHKGFAFSIDSYRLD
Sbjct: 607 YTLHHDFESEERFQEMADLLTLSITEPDLVYHKGFAFSIDSYRLD 651
>gb|ABQ14933.1| Ycf2 [Saxifraga stolonifera]
Length = 2274
Score = 84.7 bits (208), Expect = 3e-14
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSYRLD
Sbjct: 604 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYRLD 648
>gb|AEZ48753.1| hypothetical chloroplast RF2, partial [Sparganium eurycarpum]
Length = 2260
Score = 83.6 bits (205), Expect = 7e-14
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YH+GFAFSIDSYRLD
Sbjct: 598 YTLHHDFESEERFQEMADLFTLSITEPDLVYHRGFAFSIDSYRLD 642
>ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica]
gi|114330032|ref|YP_740713.1| hypothetical chloroplast
RF2 [Nandina domestica]
gi|122165906|sp|Q09FP8.1|YCF2_NANDO RecName:
Full=Protein Ycf2 gi|114054515|gb|ABI49908.1|
hypothetical chloroplast RF2 [Nandina domestica]
gi|114054534|gb|ABI49927.1| hypothetical chloroplast RF2
[Nandina domestica]
Length = 2299
Score = 83.6 bits (205), Expect = 7e-14
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADLLTLSITEPDL YHKGFAFSIDSY LD
Sbjct: 604 YTLHHDFESEERFQEMADLLTLSITEPDLVYHKGFAFSIDSYGLD 648
>ref|YP_001123242.1| hypothetical protein ArhiCp064 [Arabis hirsuta]
gi|139389706|ref|YP_001123262.1| hypothetical protein
ArhiCp084 [Arabis hirsuta]
gi|205412799|sp|A4QK61.1|YCF2_ARAHI RecName:
Full=Protein Ycf2 gi|134286440|dbj|BAF50066.1|
hypothetical protein [Arabis hirsuta]
gi|134286461|dbj|BAF50087.1| hypothetical protein
[Arabis hirsuta]
Length = 2296
Score = 83.2 bits (204), Expect = 9e-14
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFEAEERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 602 YTLRHDFEAEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 646
>ref|YP_053198.1| Ycf2 [Nymphaea alba] gi|50346848|ref|YP_053219.1| Ycf2 [Nymphaea
alba] gi|68053155|sp|Q6EVY7.1|YCF2_NYMAL RecName:
Full=Protein Ycf2 gi|50250372|emb|CAF28638.1| ycf2
[Nymphaea alba] gi|50250393|emb|CAF28659.1| ycf2
[Nymphaea alba]
Length = 2253
Score = 82.8 bits (203), Expect = 1e-13
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 346 KYTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
+YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 602 RYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 647
>gb|ADD30889.1| putative RF2 protein [Ximenia americana]
gi|340807071|gb|AEK71677.1| hypothetical chloroplast RF2
[Ximenia americana]
Length = 2285
Score = 82.8 bits (203), Expect = 1e-13
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 346 KYTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
+YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 601 RYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 646
>ref|XP_006850224.1| hypothetical protein AMTR_s00543p00008950 [Amborella trichopoda]
gi|548853828|gb|ERN11805.1| hypothetical protein
AMTR_s00543p00008950 [Amborella trichopoda]
Length = 2100
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFA SIDSYRLD
Sbjct: 432 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFALSIDSYRLD 476
>gb|ADD30893.1| putative RF2 protein [Ficus sp. Moore 315]
gi|340807156|gb|AEK71751.1| hypothetical chloroplast RF2
[Ficus sp. M. J. Moore 315]
Length = 2289
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFA SIDSYRLD
Sbjct: 606 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFALSIDSYRLD 650
>ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifolia]
gi|289065151|ref|YP_003434036.1| hypothetical
chloroplast RF21 [Typha latifolia]
gi|281371816|gb|ADA63743.1| hypothetical chloroplast
RF21 [Typha latifolia] gi|281371834|gb|ADA63761.1|
hypothetical chloroplast RF21 [Typha latifolia]
Length = 2293
Score = 82.4 bits (202), Expect = 2e-13
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YH+GF+FSIDSYRLD
Sbjct: 599 YTLHHDFESEERFQEMADLFTLSITEPDLVYHRGFSFSIDSYRLD 643
>ref|YP_762304.1| hypothetical chloroplast RF2 [Morus indica]
gi|114804324|ref|YP_762321.1| hypothetical chloroplast
RF2 [Morus indica] gi|122166751|sp|Q09WV7.1|YCF2_MORIN
RecName: Full=Protein Ycf2 gi|78100359|gb|ABB21000.1|
hypothetical chloroplast RF2 [Morus indica]
gi|78100376|gb|ABB21017.1| hypothetical chloroplast RF2
[Morus indica]
Length = 2292
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFA SIDSYRLD
Sbjct: 606 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFALSIDSYRLD 650
>ref|YP_009019931.1| hypothetical chloroplast RF21 (chloroplast) [Azadirachta indica]
gi|595789742|ref|YP_009019949.1| hypothetical
chloroplast RF21 (chloroplast) [Azadirachta indica]
gi|586947578|gb|AHJ91361.1| hypothetical chloroplast
RF21 (chloroplast) [Azadirachta indica]
gi|586947597|gb|AHJ91380.1| hypothetical chloroplast
RF21 (chloroplast) [Azadirachta indica]
Length = 2275
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 602 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 646
>ref|YP_008993735.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia salicifolia]
gi|573972436|ref|YP_008993754.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia salicifolia]
Length = 2298
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 607 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 651
>ref|YP_009000376.1| hypothetical protein BN845_0850 (chloroplast) [Arabis alpina]
gi|575771070|ref|YP_009000396.1| hypothetical protein
BN845_1270 (chloroplast) [Arabis alpina]
gi|571025848|emb|CCW28223.1| hypothetical protein
BN845_0850 (chloroplast) [Arabis alpina]
gi|571025868|emb|CCW28243.1| hypothetical protein
BN845_1270 (chloroplast) [Arabis alpina]
Length = 2292
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 606 YTLRHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 650
>ref|YP_008993907.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia sprengeri]
gi|570772356|ref|YP_008993926.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia sprengeri]
Length = 2298
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 607 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 651
>ref|YP_008993821.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia sinica]
gi|570772258|ref|YP_008993840.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia sinica]
Length = 2298
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 607 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 651
>ref|YP_008993649.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia odora]
gi|570760248|ref|YP_008993668.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia odora]
Length = 2298
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 607 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 651
>ref|YP_008993391.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia pyramidata]
gi|570759987|ref|YP_008993410.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia pyramidata]
Length = 2298
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 607 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 651
>ref|YP_008993219.1| hypothetical chloroplast RF21 (chloroplast) [Magnolia cathcartii]
gi|570759813|ref|YP_008993238.1| hypothetical
chloroplast RF21 (chloroplast) [Magnolia cathcartii]
Length = 2298
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 607 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 651
>ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) [Liquidambar formosana]
gi|568244972|ref|YP_008963754.1| hypothetical
chloroplast RF21 (chloroplast) [Liquidambar formosana]
gi|491650414|gb|AGL13474.1| hypothetical chloroplast
RF21 (chloroplast) [Liquidambar formosana]
gi|491650433|gb|AGL13493.1| hypothetical chloroplast
RF21 (chloroplast) [Liquidambar formosana]
Length = 2297
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 YTLCHDFEAEERFQEIADLLTLSITEPDLGYHKGFAFSIDSYRLD 209
YTL HDFE+EERFQE+ADL TLSITEPDL YHKGFAFSIDSY LD
Sbjct: 602 YTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLD 646