BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00055414
         (260 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japono...   170   2e-40
gb|AGE93276.1| RNA polymerase beta subunit [Chamaedorea seifrizii]    170   2e-40
gb|AFB18327.1| RNA polymerase beta subunit, partial [Chamaedorea...   170   2e-40
gb|AEZ01419.1| RNA polymerase beta subunit (chloroplast) [Japono...   170   2e-40
ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis s...   170   2e-40
ref|YP_784378.1| RNA polymerase beta subunit [Drimys granadensis...   170   2e-40
gb|AHE41627.1| RNA polymerase beta subunit protein, partial (chl...   169   3e-40
gb|AHE41625.1| RNA polymerase beta subunit protein, partial (chl...   169   3e-40
gb|AHE41623.1| RNA polymerase beta subunit protein, partial (chl...   169   3e-40
gb|AHE41621.1| RNA polymerase beta subunit protein (chloroplast)...   169   3e-40
gb|AHE41619.1| RNA polymerase beta subunit protein (chloroplast)...   169   3e-40
ref|YP_008963683.1| RNA polymerase beta subunit (chloroplast) [L...   169   3e-40
ref|YP_008963472.1| RNA polymerase beta subunit (chloroplast) [P...   169   3e-40
ref|YP_008081357.1| RNA polymerase beta subunit (chloroplast) [T...   169   3e-40
gb|AAZ03991.1| RNA polymerase beta chain [Acorus americanus]          169   3e-40
ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus] gi...   169   3e-40
ref|YP_005097866.1| RNA polymerase beta subunit (chloroplast) [C...   169   3e-40
ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|YP_004769939.1| RNA polymerase beta subunit (chloroplast) [W...   169   3e-40
ref|YP_004769622.1| RNA polymerase beta subunit (chloroplast) [S...   169   3e-40

>gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japonolirion osense]
          Length = 1070

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE IHLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 490 GIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 549

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 550 RQAVPLSRSEKCIVGTGLERQAALDS 575


>gb|AGE93276.1| RNA polymerase beta subunit [Chamaedorea seifrizii]
          Length = 1068

 Score =  170 bits (430), Expect = 2e-40
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWEHIHLRS FPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 488 GIQEEQVVPARYRQEFLTIAWEHIHLRSFFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 547

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQ ALDS
Sbjct: 548 RQAVPLSRSEKCIVGTGLERQTALDS 573


>gb|AFB18327.1| RNA polymerase beta subunit, partial [Chamaedorea seifrizii]
          Length = 1079

 Score =  170 bits (430), Expect = 2e-40
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWEHIHLRS FPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 499 GIQEEQVVPARYRQEFLTIAWEHIHLRSFFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 558

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQ ALDS
Sbjct: 559 RQAVPLSRSEKCIVGTGLERQTALDS 584


>gb|AEZ01419.1| RNA polymerase beta subunit (chloroplast) [Japonolirion osense]
          Length = 1070

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE IHLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 490 GIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 549

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 550 RQAVPLSRSEKCIVGTGLERQAALDS 575


>ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis saniculifolia]
           gi|226933874|gb|ACO92007.1| RNA polymerase beta subunit
           [Megaleranthis saniculifolia]
          Length = 1071

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE IHLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 491 GIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 550

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 551 RQAVPLSRSEKCIVGTGLERQAALDS 576


>ref|YP_784378.1| RNA polymerase beta subunit [Drimys granadensis]
           gi|122164449|sp|Q06H05.1|RPOB_DRIGR RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|112032654|gb|ABH88289.1| RNA polymerase beta subunit
           [Drimys granadensis]
          Length = 1071

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE IHLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 490 GIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 549

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 550 RQAVPLSRSEKCIVGTGLERQAALDS 575


>gb|AHE41627.1| RNA polymerase beta subunit protein, partial (chloroplast)
           [Mytilaria laosensis]
          Length = 793

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 473 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 532

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 533 RQAVPLSRSEKCIVGTGLERQAALDS 558


>gb|AHE41625.1| RNA polymerase beta subunit protein, partial (chloroplast) [Gunnera
           manicata]
          Length = 794

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 474 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 533

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 534 RQAVPLSRSEKCIVGTGLERQAALDS 559


>gb|AHE41623.1| RNA polymerase beta subunit protein, partial (chloroplast)
           [Disanthus cercidifolius subsp. longipes]
          Length = 794

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 474 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 533

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 534 RQAVPLSRSEKCIVGTGLERQAALDS 559


>gb|AHE41621.1| RNA polymerase beta subunit protein (chloroplast) [Itea chinensis]
          Length = 1070

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 490 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 549

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 550 RQAVPLSRSEKCIVGTGLERQAALDS 575


>gb|AHE41619.1| RNA polymerase beta subunit protein (chloroplast) [Saxifraga
           stolonifera]
          Length = 1074

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 494 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 553

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 554 RQAVPLSRSEKCIVGTGLERQAALDS 579


>ref|YP_008963683.1| RNA polymerase beta subunit (chloroplast) [Liquidambar formosana]
           gi|491650363|gb|AGL13423.1| RNA polymerase beta subunit
           (chloroplast) [Liquidambar formosana]
          Length = 1070

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 490 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 549

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 550 RQAVPLSRSEKCIVGTGLERQAALDS 575


>ref|YP_008963472.1| RNA polymerase beta subunit (chloroplast) [Penthorum chinense]
           gi|403226773|gb|AFR25652.1| RNA polymerase beta subunit
           (chloroplast) [Penthorum chinense]
          Length = 1070

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 490 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 549

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 550 RQAVPLSRSEKCIVGTGLERQAALDS 575


>ref|YP_008081357.1| RNA polymerase beta subunit (chloroplast) [Tetracentron sinense]
           gi|479279195|gb|AGJ72049.1| RNA polymerase beta subunit
           (chloroplast) [Tetracentron sinense]
          Length = 1070

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 490 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 549

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 550 RQAVPLSRSEKCIVGTGLERQAALDS 575


>gb|AAZ03991.1| RNA polymerase beta chain [Acorus americanus]
          Length = 1068

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQ+VPARYRQEFLTIAWE IHLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 488 GIQEEQIVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 547

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 548 RQAVPLSRSEKCIVGTGLERQAALDS 573


>ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus]
           gi|74381701|emb|CAI53786.1| RNA polymerase beta subunit
           [Acorus calamus]
          Length = 1083

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQ+VPARYRQEFLTIAWE IHLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 503 GIQEEQIVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 562

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 563 RQAVPLSRSEKCIVGTGLERQAALDS 588


>ref|YP_005097866.1| RNA polymerase beta subunit (chloroplast) [Colocasia esculenta]
           gi|340536631|gb|AEK48398.1| RNA polymerase beta subunit
           (chloroplast) [Colocasia esculenta]
           gi|340536718|gb|AEK48484.1| RNA polymerase beta subunit
           (chloroplast) [Colocasia esculenta]
          Length = 1072

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 492 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 551

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 552 RQAVPLSRSEKCIVGTGLERQAALDS 577


>ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 13  GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 72

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 73  RQAVPLSRSEKCIVGTGLERQAALDS 98


>ref|YP_004769939.1| RNA polymerase beta subunit (chloroplast) [Wolffia australiana]
           gi|341834231|gb|AEK94500.1| RNA polymerase beta subunit
           [Wolffia australiana]
          Length = 1072

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 492 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 551

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 552 RQAVPLSRSEKCIVGTGLERQAALDS 577


>ref|YP_004769622.1| RNA polymerase beta subunit (chloroplast) [Spirodela polyrhiza]
           gi|341834063|gb|AEK94334.1| RNA polymerase beta subunit
           [Spirodela polyrhiza]
          Length = 1072

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 259 GIQEEQVVPARYRQEFLTIAWEHIHLRSIFPFQYFSLGASLIPFIEHNDANRALMSSNMQ 80
           GIQEEQVVPARYRQEFLTIAWE +HLRSIFPFQYFS+GASLIPFIEHNDANRALMSSNMQ
Sbjct: 492 GIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQ 551

Query: 79  RQAVPLSRSEKCIVGTGLERQAALDS 2
           RQAVPLSRSEKCIVGTGLERQAALDS
Sbjct: 552 RQAVPLSRSEKCIVGTGLERQAALDS 577