BLASTX nr result

ID: Sinomenium22_contig00055369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00055369
         (289 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          52   3e-06

>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 52.0 bits (123), Expect(3) = 3e-06
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +3

Query: 99  MINKILSTERMPDEWRKNILISIYKHKMNISSCENYQIYKL 221
           + N+IL +++MP EWRK+ L+ IYK+K +I SCENY+  KL
Sbjct: 96  LFNEILRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGIKL 136



 Score = 22.3 bits (46), Expect(3) = 3e-06
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 5   KTLLR*IKNAKTL*PNGIPIEVY 73
           K  L  +KN + + P+ IPIEV+
Sbjct: 60  KEALNQMKNDRAVGPDNIPIEVW 82



 Score = 21.2 bits (43), Expect(3) = 3e-06
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 227 LKLWDKVIENQVLAEIMV 280
           +KLW++VIE  +  E  V
Sbjct: 141 MKLWERVIERGLRKETQV 158


Top