BLASTX nr result

ID: Sinomenium22_contig00055152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00055152
         (499 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    59   7e-07
ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A...    57   2e-06
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun...    56   6e-06
ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, part...    56   6e-06

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = +2

Query: 335 DKIEKGVLGGEENLLSTAGKEVLLKTVALSMPIFLMSGFKFPTTVCLSISSKLA 496
           D++ K VLG + N LS  GKE+LLK VA+++P + MS FK P T+C  I S +A
Sbjct: 770 DRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMA 823


>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 755

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 39/54 (72%)
 Frame = +2

Query: 335 DKIEKGVLGGEENLLSTAGKEVLLKTVALSMPIFLMSGFKFPTTVCLSISSKLA 496
           D I K + G ++ +LS AGKE+L+K VA S+PI+ M+ FKFP T+C  I+S LA
Sbjct: 242 DTILKKIQGWKQGILSPAGKEILIKAVAASIPIYPMACFKFPKTLCNQINSALA 295


>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
           gi|462406722|gb|EMJ12186.1| hypothetical protein
           PRUPE_ppa021345mg [Prunus persica]
          Length = 759

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/54 (50%), Positives = 40/54 (74%)
 Frame = +2

Query: 335 DKIEKGVLGGEENLLSTAGKEVLLKTVALSMPIFLMSGFKFPTTVCLSISSKLA 496
           D+I + V G  ++ LS AG+E+L+K+VAL++P + M+ FKFPTT+C  I S LA
Sbjct: 164 DRILRKVHGWNQHCLSQAGREILIKSVALAVPAYPMNIFKFPTTLCKEIDSVLA 217


>ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
           gi|462395001|gb|EMJ00800.1| hypothetical protein
           PRUPE_ppa023095mg, partial [Prunus persica]
          Length = 933

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/54 (50%), Positives = 40/54 (74%)
 Frame = +2

Query: 335 DKIEKGVLGGEENLLSTAGKEVLLKTVALSMPIFLMSGFKFPTTVCLSISSKLA 496
           D+I + V G  ++ LS AG+E+L+K+VAL++P + M+ FKFPTT+C  I S LA
Sbjct: 352 DRILRKVHGWNQHCLSQAGREILIKSVALAVPAYPMNIFKFPTTLCKEIDSVLA 405


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