BLASTX nr result

ID: Sinomenium22_contig00054693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00054693
         (264 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632807.1| PREDICTED: LOW QUALITY PROTEIN: trafficking ...    61   2e-07
ref|XP_006398098.1| hypothetical protein EUTSA_v10001067mg [Eutr...    60   2e-07
ref|XP_006302980.1| hypothetical protein CARUB_v10021128mg [Caps...    60   2e-07
ref|XP_002889290.1| predicted protein [Arabidopsis lyrata subsp....    60   2e-07
ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana] gi|56...    60   2e-07
gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]                  60   2e-07
ref|XP_006356202.1| PREDICTED: trafficking protein particle comp...    59   5e-07
ref|XP_004241702.1| PREDICTED: trafficking protein particle comp...    59   5e-07
ref|XP_004241701.1| PREDICTED: trafficking protein particle comp...    59   5e-07
ref|XP_006368498.1| hypothetical protein POPTR_0001s03500g [Popu...    59   5e-07
gb|EYU24657.1| hypothetical protein MIMGU_mgv1a0160741mg, partia...    58   1e-06
ref|XP_007033837.1| SNARE-like superfamily protein isoform 1 [Th...    58   1e-06
ref|XP_007226059.1| hypothetical protein PRUPE_ppa013209mg [Prun...    58   1e-06
ref|NP_001238587.1| uncharacterized protein LOC100527093 [Glycin...    58   1e-06
ref|XP_006442766.1| hypothetical protein CICLE_v10022803mg [Citr...    58   2e-06
ref|XP_007033838.1| SNARE-like superfamily protein isoform 2 [Th...    58   2e-06
ref|XP_004147330.1| PREDICTED: trafficking protein particle comp...    58   2e-06
gb|AFS50006.1| SNARE-like protein [Dendrobium officinale]              57   2e-06
ref|XP_001772445.1| predicted protein [Physcomitrella patens] gi...    57   2e-06
ref|XP_007137740.1| hypothetical protein PHAVU_009G152000g [Phas...    57   3e-06

>ref|XP_003632807.1| PREDICTED: LOW QUALITY PROTEIN: trafficking protein particle
           complex subunit 2-like [Vitis vinifera]
          Length = 135

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/34 (88%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNEDGIKSFFQEVHELYIKV+  PL+L
Sbjct: 80  LMLLHDSRNEDGIKSFFQEVHELYIKVLLNPLYL 113


>ref|XP_006398098.1| hypothetical protein EUTSA_v10001067mg [Eutrema salsugineum]
           gi|557099187|gb|ESQ39551.1| hypothetical protein
           EUTSA_v10001067mg [Eutrema salsugineum]
          Length = 107

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNEDGIKSFFQEVHELYIK++  PL+L
Sbjct: 52  LMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYL 85


>ref|XP_006302980.1| hypothetical protein CARUB_v10021128mg [Capsella rubella]
           gi|482571690|gb|EOA35878.1| hypothetical protein
           CARUB_v10021128mg [Capsella rubella]
          Length = 135

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNEDGIKSFFQEVHELYIK++  PL+L
Sbjct: 80  LMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYL 113


>ref|XP_002889290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335131|gb|EFH65549.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNEDGIKSFFQEVHELYIK++  PL+L
Sbjct: 89  LMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYL 122


>ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana]
           gi|567167471|ref|XP_006398099.1| hypothetical protein
           EUTSA_v10001067mg [Eutrema salsugineum]
           gi|567167474|ref|XP_006398100.1| hypothetical protein
           EUTSA_v10001067mg [Eutrema salsugineum]
           gi|332198292|gb|AEE36413.1| SNARE-like protein
           [Arabidopsis thaliana] gi|557099188|gb|ESQ39552.1|
           hypothetical protein EUTSA_v10001067mg [Eutrema
           salsugineum] gi|557099189|gb|ESQ39553.1| hypothetical
           protein EUTSA_v10001067mg [Eutrema salsugineum]
          Length = 135

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNEDGIKSFFQEVHELYIK++  PL+L
Sbjct: 80  LMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYL 113


>gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]
          Length = 135

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNEDGIKSFFQEVHELYIK++  PL+L
Sbjct: 80  LMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYL 113


>ref|XP_006356202.1| PREDICTED: trafficking protein particle complex subunit 2-like
           isoform X1 [Solanum tuberosum]
          Length = 186

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/34 (82%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK++  PL+L
Sbjct: 131 LMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYL 164


>ref|XP_004241702.1| PREDICTED: trafficking protein particle complex subunit 2-like
           isoform 2 [Solanum lycopersicum]
          Length = 115

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/34 (82%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK++  PL+L
Sbjct: 60  LMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYL 93


>ref|XP_004241701.1| PREDICTED: trafficking protein particle complex subunit 2-like
           isoform 1 [Solanum lycopersicum]
           gi|565379589|ref|XP_006356203.1| PREDICTED: trafficking
           protein particle complex subunit 2-like isoform X2
           [Solanum tuberosum]
          Length = 135

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/34 (82%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK++  PL+L
Sbjct: 80  LMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYL 113


>ref|XP_006368498.1| hypothetical protein POPTR_0001s03500g [Populus trichocarpa]
           gi|550346419|gb|ERP65067.1| hypothetical protein
           POPTR_0001s03500g [Populus trichocarpa]
          Length = 135

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/34 (82%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK++  PL+L
Sbjct: 80  LMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYL 113


>gb|EYU24657.1| hypothetical protein MIMGU_mgv1a0160741mg, partial [Mimulus
           guttatus]
          Length = 58

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK +  PL+L
Sbjct: 3   LMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYL 36


>ref|XP_007033837.1| SNARE-like superfamily protein isoform 1 [Theobroma cacao]
           gi|508712866|gb|EOY04763.1| SNARE-like superfamily
           protein isoform 1 [Theobroma cacao]
          Length = 135

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/33 (84%), Positives = 31/33 (93%), Gaps = 2/33 (6%)
 Frame = -2

Query: 260 MLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           MLLHDSRN+DGIKSFFQEVHELYIKV+  PL+L
Sbjct: 81  MLLHDSRNDDGIKSFFQEVHELYIKVLLNPLYL 113


>ref|XP_007226059.1| hypothetical protein PRUPE_ppa013209mg [Prunus persica]
           gi|462422995|gb|EMJ27258.1| hypothetical protein
           PRUPE_ppa013209mg [Prunus persica]
          Length = 135

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK +  PL+L
Sbjct: 80  LMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYL 113


>ref|NP_001238587.1| uncharacterized protein LOC100527093 [Glycine max]
           gi|255631540|gb|ACU16137.1| unknown [Glycine max]
          Length = 135

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK +  PL+L
Sbjct: 80  LMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYL 113


>ref|XP_006442766.1| hypothetical protein CICLE_v10022803mg [Citrus clementina]
           gi|557545028|gb|ESR56006.1| hypothetical protein
           CICLE_v10022803mg [Citrus clementina]
          Length = 135

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 31/33 (93%), Gaps = 2/33 (6%)
 Frame = -2

Query: 260 MLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           MLLHDSRN+DGIKSFFQEVHELYIK++  PL+L
Sbjct: 81  MLLHDSRNDDGIKSFFQEVHELYIKILLNPLYL 113


>ref|XP_007033838.1| SNARE-like superfamily protein isoform 2 [Theobroma cacao]
           gi|590654923|ref|XP_007033839.1| SNARE-like superfamily
           protein isoform 2 [Theobroma cacao]
           gi|508712867|gb|EOY04764.1| SNARE-like superfamily
           protein isoform 2 [Theobroma cacao]
           gi|508712868|gb|EOY04765.1| SNARE-like superfamily
           protein isoform 2 [Theobroma cacao]
          Length = 135

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 31/33 (93%), Gaps = 2/33 (6%)
 Frame = -2

Query: 260 MLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           MLLHDSRN+DGIKSFFQEVHELYIK++  PL+L
Sbjct: 81  MLLHDSRNDDGIKSFFQEVHELYIKILLNPLYL 113


>ref|XP_004147330.1| PREDICTED: trafficking protein particle complex subunit 2-like
           [Cucumis sativus] gi|449508705|ref|XP_004163387.1|
           PREDICTED: trafficking protein particle complex subunit
           2-like [Cucumis sativus]
          Length = 135

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQEVHELYIK +  PL+L
Sbjct: 80  LMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYL 113


>gb|AFS50006.1| SNARE-like protein [Dendrobium officinale]
          Length = 135

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 31/34 (91%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNED IKSFFQEVHELY+K++  PL+L
Sbjct: 80  LMLLHDSRNEDAIKSFFQEVHELYLKILLNPLYL 113


>ref|XP_001772445.1| predicted protein [Physcomitrella patens]
           gi|162676242|gb|EDQ62727.1| predicted protein
           [Physcomitrella patens]
          Length = 135

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 32/34 (94%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRNEDGIK+FFQEVHELYIK++  PL++
Sbjct: 80  LMLLHDSRNEDGIKNFFQEVHELYIKMLLNPLYV 113


>ref|XP_007137740.1| hypothetical protein PHAVU_009G152000g [Phaseolus vulgaris]
           gi|561010827|gb|ESW09734.1| hypothetical protein
           PHAVU_009G152000g [Phaseolus vulgaris]
          Length = 135

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/34 (79%), Positives = 31/34 (91%), Gaps = 2/34 (5%)
 Frame = -2

Query: 263 LMLLHDSRNEDGIKSFFQEVHELYIKVM--PLFL 168
           LMLLHDSRN+DGIKSFFQ+VHELYIK +  PL+L
Sbjct: 80  LMLLHDSRNDDGIKSFFQDVHELYIKTLLNPLYL 113


Top