BLASTX nr result
ID: Sinomenium22_contig00054615
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00054615
(309 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera] 65 1e-08
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi... 65 1e-08
emb|CBI18897.3| unnamed protein product [Vitis vinifera] 64 2e-08
gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii] 62 8e-08
gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Tri... 62 8e-08
dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 1e-07
ref|XP_006828885.1| hypothetical protein AMTR_s00001p00184260 [A... 61 2e-07
ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mi... 60 2e-07
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 60 3e-07
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 60 3e-07
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 60 3e-07
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|... 60 4e-07
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis] 59 5e-07
ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi... 59 5e-07
ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [S... 59 5e-07
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays] 59 7e-07
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR... 59 7e-07
ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG3... 59 7e-07
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 58 1e-06
gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indi... 58 1e-06
>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
Length = 559
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 12/66 (18%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV-------S*NSKPRITDSEE-----KV 152
P+SHPDRESVLAS+GS+NEL KCLECS+RGRKV S SK + D E+ K
Sbjct: 153 PSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKN 212
Query: 151 VIESGV 134
+++ G+
Sbjct: 213 IVQLGI 218
>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera]
Length = 503
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 7/53 (13%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV-------S*NSKPRITDSEE 158
P+SHPDRESVLAS+GS+NEL KCLECS+RGRKV S SK + D E+
Sbjct: 165 PSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDRED 217
>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
Length = 419
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
P+SHPDRESVLAS+GS+NEL KCLECS+RGRKV
Sbjct: 111 PSSHPDRESVLASVGSENELVKCLECSERGRKV 143
>gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii]
Length = 585
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKVS--*NSKPRITDSEEKVVIES 140
P++HPDRE+V AS GS+N+LAKC+ECS+RGRKV + ++ DSEE+ V+++
Sbjct: 174 PSAHPDREAVKASAGSENQLAKCVECSERGRKVPDIMGREGKLPDSEEEKVLDT 227
>gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Triticum urartu]
Length = 575
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKVS--*NSKPRITDSEEKVVIES 140
P++HPDRE+V AS GS+N+LAKC+ECS+RGRKV + ++ DSEE+ V+++
Sbjct: 174 PSAHPDREAVKASAGSENQLAKCVECSERGRKVPDIMGREGKLPDSEEEKVLDT 227
>dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 572
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/54 (53%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKVS--*NSKPRITDSEEKVVIES 140
P++HPDRE+V AS GS+N+LAKC+ECS+RGRKV + ++ DSEE V+++
Sbjct: 174 PSAHPDREAVKASAGSENQLAKCVECSERGRKVPDIMGREGKLPDSEENKVLDT 227
>ref|XP_006828885.1| hypothetical protein AMTR_s00001p00184260 [Amborella trichopoda]
gi|548833864|gb|ERM96301.1| hypothetical protein
AMTR_s00001p00184260 [Amborella trichopoda]
Length = 607
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRK---VS*NSKPRITDSEEKVVI 146
P++HPDRE+V AS+GSDNEL KC ECS+RGRK V + R+T S +KV +
Sbjct: 169 PSAHPDREAVAASLGSDNELVKCTECSERGRKVPGVMGHGDGRVTVSGDKVKV 221
>ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Brachypodium distachyon]
Length = 553
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/54 (48%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKVS--*NSKPRITDSEEKVVIES 140
P++HPDRE+V+AS+GS N+LAKC+ECS+RGRKV + ++ + EE++++++
Sbjct: 174 PSAHPDREAVMASVGSGNQLAKCVECSERGRKVPDIMGREGKVPNPEEEILLDA 227
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
PN H DRESV AS+GSDNEL KCLECS+RGRKV
Sbjct: 181 PNCHRDRESVKASLGSDNELVKCLECSERGRKV 213
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Cucumis sativus]
Length = 519
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
PN H DRESV AS+GSDNEL KCLECS+RGRKV
Sbjct: 181 PNCHRDRESVKASLGSDNELVKCLECSERGRKV 213
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
melo]
Length = 519
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
PN H DRESV AS+GSDNEL KCLECS+RGRKV
Sbjct: 181 PNCHRDRESVKASLGSDNELVKCLECSERGRKV 213
>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao]
gi|508726926|gb|EOY18823.1| Pseudouridine synthase
[Theobroma cacao]
Length = 507
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKVS*NSKPRITDSEEKVV-----IESGVT 131
P+ H DRESVLAS+GS NEL KCLECS+RGRKV+ R +++ +V +G +
Sbjct: 184 PSCHRDRESVLASLGSGNELVKCLECSERGRKVAGVMGKRSFEAKSTIVHSDVSSNNGES 243
Query: 130 GLLQNTMLMIFHYGEEKDWDSQLGVVEVTKVKLE 29
G + + E D Q EV KV +E
Sbjct: 244 GNVIKEHNLTSELEEVTDSSVQNEFTEVDKVNVE 277
>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 621
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/33 (75%), Positives = 32/33 (96%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
P+SHP+RESVLAS+GS++EL KC+ECS+RGRKV
Sbjct: 180 PSSHPNRESVLASLGSESELVKCVECSERGRKV 212
>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Setaria italica]
Length = 538
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
P++HPDRE+V+ASMGS +EL KCLECS+RGRKV
Sbjct: 173 PSAHPDREAVMASMGSGSELTKCLECSERGRKV 205
>ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [Sorghum bicolor]
gi|241934333|gb|EES07478.1| hypothetical protein
SORBIDRAFT_04g032290 [Sorghum bicolor]
Length = 567
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
P++HPDRE+V+ASMGS +EL KCLECS+RGRKV
Sbjct: 178 PSAHPDREAVMASMGSGSELTKCLECSERGRKV 210
>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
Length = 565
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
P++HPDRE+V+ASMGS +EL KCLECS+RGRK+
Sbjct: 178 PSAHPDREAVMASMGSGSELTKCLECSERGRKI 210
>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
synthase family protein [Zea mays]
Length = 562
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
P++HPDRE+V+ASMGS +EL KCLECS+RGRK+
Sbjct: 178 PSAHPDREAVMASMGSGSELTKCLECSERGRKI 210
>ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG38019.1| tRNA
pseudouridine synthase family protein [Zea mays]
Length = 561
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKV 197
P++HPDRE+V+ASMGS +EL KCLECS+RGRK+
Sbjct: 178 PSAHPDREAVMASMGSGSELTKCLECSERGRKI 210
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKVS*NSKPRITDSEEKV 152
P++HPDRE+V+AS+GS +EL KCLECS+RGRKV P + E KV
Sbjct: 175 PSAHPDREAVMASVGSGSELTKCLECSERGRKV-----PGVMGREGKV 217
>gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indica Group]
Length = 581
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -3
Query: 295 PNSHPDRESVLASMGSDNELAKCLECSDRGRKVS*NSKPRITDSEEKV 152
P++HPDRE+V+AS+GS +EL KCLECS+RGRKV P + E KV
Sbjct: 175 PSAHPDREAVMASVGSGSELTKCLECSERGRKV-----PGVMGREGKV 217