BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00054574
         (319 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...    77   3e-12
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...    70   2e-10
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...    70   3e-10
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...    70   3e-10
ref|XP_004499456.1| PREDICTED: uncharacterized protein LOC101503...    69   7e-10
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]          65   1e-08
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          65   1e-08
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    65   1e-08
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...    62   6e-08
ref|XP_006491716.1| PREDICTED: uncharacterized protein LOC102619...    62   8e-08
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             57   3e-06
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    57   3e-06
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    56   4e-06

>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
 Frame = -3

Query: 317 FSEQSNPDEDTLFALQPLDSFEDNNDTSSET---DDFSPPLIQAMA*SHKPQQALLPFVN 147
           FSEQS+ DEDT+FALQ   S + ++D +S     DD   P+              LP V 
Sbjct: 546 FSEQSSADEDTIFALQDSSSDDSSSDEASSAELGDDRRFPIYSFKEIGSTLPTPSLPCVE 605

Query: 146 ASVLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKH 27
             VL +K+  P  VIAYM+TGA  +M+NP ILP +AW KH
Sbjct: 606 IHVLASKFSHPKKVIAYMDTGAQITMMNPSILPTEAWAKH 645


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
 Frame = -3

Query: 317 FSEQSNPDEDTLFALQPLDSFEDNNDTSSET-----DDFSPPLIQAMA*SHKPQQALLPF 153
           +SEQS+ DE+T+FALQ  +S  DN+ +   T     DD   P+              LP 
Sbjct: 265 YSEQSSADEETIFALQ--NSSSDNSSSDEATFAESEDDGCFPIYSFKEIGSTLPTPPLPC 322

Query: 152 VNASVLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKH 27
           V   +L +K+  P  VIAYM+TGA  +M+NP ILP +AW KH
Sbjct: 323 VEIHILASKFSHPKKVIAYMDTGAQITMMNPSILPTEAWVKH 364


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSFEDNNDTSS----ETDDFSPPLIQAMA*SHKPQQALLPFV 150
            +SEQS+ DE+T+FALQ   S   ++D +S    E D F P        S  P   L P V
Sbjct: 1051 YSEQSSADEETIFALQNSSSGNSSSDEASFAESEDDGFFPIYSFKEIGSTLPTPPL-PCV 1109

Query: 149  NASVLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKHL 24
               VL +K+  P  V AYM+TGA  +M+NP ILP +AW KH+
Sbjct: 1110 EIHVLASKFSHPKKVKAYMDTGAQITMMNPSILPTEAWVKHV 1151


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSFEDNNDTSSET-----DDFSPPLIQAMA*SHKPQQALLPF 153
            +SEQS+ DE+T+FALQ  +S  DN+ +   T     DD   P+              LP 
Sbjct: 1106 YSEQSSADEETIFALQ--NSSSDNSSSDEATFVESEDDGCFPIYSFKEIGSTLPTPPLPC 1163

Query: 152  VNASVLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKH 27
            V   +L +K+  P  +IAYM+TGA  +M+NP ILP +AW KH
Sbjct: 1164 VEIHILASKFSHPKKIIAYMDTGAQITMMNPSILPTEAWVKH 1205


>ref|XP_004499456.1| PREDICTED: uncharacterized protein LOC101503858 [Cicer arietinum]
          Length = 1109

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 39/96 (40%), Positives = 56/96 (58%)
 Frame = -3

Query: 311 EQSNPDEDTLFALQPLDSFEDNNDTSSETDDFSPPLIQAMA*SHKPQQALLPFVNASVLQ 132
           E S+ DE+T+ ALQ   SFE+N+   SE +D    +       +    + LP     +L 
Sbjct: 570 EWSSADEETIVALQS-SSFEENSPVESEKEDECFLVYSLKEVGNTLLTSPLPCAEIHILA 628

Query: 131 TKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKHL 24
           +K+  P  VIAYM+TGA R+M+NP ILP +AW KH+
Sbjct: 629 SKFSHPKKVIAYMDTGAQRTMMNPSILPLEAWIKHV 664


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/94 (36%), Positives = 52/94 (55%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSFEDNNDTSSETDDFSPPLIQAMA*SHKPQQALLPFVNASV 138
            FSEQ  P+++T+FALQ      D++D+      F   L+             +P +   +
Sbjct: 1006 FSEQDEPNDETVFALQ---QSSDDSDSDQSQVIFHQQLLSL------DTTVPIPSIKLQI 1056

Query: 137  LQTKYDKPICVIAYMNTGASRSMLNPKILPPDAW 36
            L +K+ +PI  I  ++TGA RSM+NP ILPPD+W
Sbjct: 1057 LPSKFQRPIPAIGLIDTGAQRSMINPHILPPDSW 1090


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/94 (36%), Positives = 52/94 (55%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSFEDNNDTSSETDDFSPPLIQAMA*SHKPQQALLPFVNASV 138
            FSEQ  P+++T+FALQ      D++D+      F   L+             +P +   +
Sbjct: 1104 FSEQDEPNDETVFALQ---QSSDDSDSDQSQVIFHQQLLSL------DTTVPIPSIKLQI 1154

Query: 137  LQTKYDKPICVIAYMNTGASRSMLNPKILPPDAW 36
            L +K+ +PI  I  ++TGA RSM+NP ILPPD+W
Sbjct: 1155 LPSKFQRPIPAIGLIDTGAQRSMINPHILPPDSW 1188


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/94 (36%), Positives = 52/94 (55%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSFEDNNDTSSETDDFSPPLIQAMA*SHKPQQALLPFVNASV 138
            FSEQ  P+++T+FALQ      D++D+      F   L+             +P +   +
Sbjct: 1117 FSEQDEPNDETVFALQ---QSSDDSDSDQSQVIFHQQLLSL------DTTVPIPSIKLQI 1167

Query: 137  LQTKYDKPICVIAYMNTGASRSMLNPKILPPDAW 36
            L +K+ +PI  I  ++TGA RSM+NP ILPPD+W
Sbjct: 1168 LPSKFQRPIPAIGLIDTGAQRSMINPHILPPDSW 1201


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
 Frame = -3

Query: 305 SNPDEDTLFALQPLDSFEDNNDTSSET-----DDFSPPLIQAMA*SHKPQQALLPFVNAS 141
           S  DE+T+FALQ  +S  DN+ +   T     DD   P+              LP V   
Sbjct: 186 SYADEETIFALQ--NSSSDNSSSDEATFAESKDDGCFPIYSFKEIGITLPTPPLPCVEIH 243

Query: 140 VLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKH 27
           VL +K+  P  VIAYM+TGA  +M+NP ILP +AW KH
Sbjct: 244 VLASKFSHPKKVIAYMDTGAQITMMNPNILPTEAWVKH 281


>ref|XP_006491716.1| PREDICTED: uncharacterized protein LOC102619662 [Citrus sinensis]
          Length = 870

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/94 (36%), Positives = 51/94 (54%)
 Frame = -3

Query: 317 FSEQSNPDEDTLFALQPLDSFEDNNDTSSETDDFSPPLIQAMA*SHKPQQALLPFVNASV 138
           FSEQ  P+++T+FALQ   +  D++D+      F   L+             +P +   +
Sbjct: 683 FSEQDEPNDETVFALQ---NSSDDSDSDQSQIIFHQQLLSL------DTTIPIPSIKLQI 733

Query: 137 LQTKYDKPICVIAYMNTGASRSMLNPKILPPDAW 36
           L  K+ +PI  I  ++TGA RSMLNP ILPP+ W
Sbjct: 734 LPLKFQRPIPAIGLIDTGAQRSMLNPHILPPEYW 767


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSF--EDNNDTSSETDDF-SPPLIQAMA*SHKPQQALLPFVN 147
            FS +  P EDTLF+L+  + +  E    TS E     +PPL +       PQ        
Sbjct: 1155 FSIEDEPSEDTLFSLEFYEEYAGEQYQITSYEAPKTENPPLPKIHTIVEIPQ------TE 1208

Query: 146  ASVLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKH 27
              V  +K+DKPI VIA+ +TGA+ S+++P ILP + W  H
Sbjct: 1209 VKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPH 1248


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSF--EDNNDTSSETDDF-SPPLIQAMA*SHKPQQALLPFVN 147
            FS +  P EDTLF+L+  + +  E    TS E     +PPL +       PQ        
Sbjct: 1155 FSIEDEPSEDTLFSLEFYEEYAGEQYQITSYEAPKTENPPLPKIHTIVEIPQ------TE 1208

Query: 146  ASVLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKH 27
              V  +K+DKPI VIA+ +TGA+ S+++P ILP + W  H
Sbjct: 1209 VKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPH 1248


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
 Frame = -3

Query: 317  FSEQSNPDEDTLFALQPLDSF--EDNNDTSSETDDF-SPPLIQAMA*SHKPQQALLPFVN 147
            FS +  P EDTLF+L+  + +  E    TS E     +PPL +       PQ        
Sbjct: 1154 FSIEDEPSEDTLFSLEFYEEYAGEQYQITSYEAPKTENPPLPKIHTIVEIPQ------TE 1207

Query: 146  ASVLQTKYDKPICVIAYMNTGASRSMLNPKILPPDAWKKH 27
              +  +K+DKPI VIA+ +TGA+ S+++P ILP + W  H
Sbjct: 1208 VKIYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPH 1247