BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00054544
         (301 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38872.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   121   9e-26
ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...   119   6e-25
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part...   119   6e-25
ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   118   7e-25
ref|XP_002511709.1| pentatricopeptide repeat-containing protein,...   117   2e-24
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   117   2e-24
gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]     115   6e-24
emb|CBI29764.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   111   9e-23
gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionem...   107   2e-21
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p...   104   1e-20
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...   104   1e-20
gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pas...   104   1e-20
gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wall...   103   2e-20
ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arab...   103   2e-20
ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20

>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  124 bits (312), Expect = 1e-26
 Identities = 62/100 (62%), Positives = 79/100 (79%), Gaps = 3/100 (3%)
 Frame = -1

Query: 292 ARFLFISQF---SHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSL 122
           AR+LF+S+     H+K  + FLWNAI+K+FSHGEDP++A ++F LML  GVC DKFSFSL
Sbjct: 68  ARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSL 127

Query: 121 VLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           VLKACSRL LIKEG+Q+  LL + E GSDVFL+N L+ +Y
Sbjct: 128 VLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLY 167


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  124 bits (312), Expect = 1e-26
 Identities = 62/100 (62%), Positives = 79/100 (79%), Gaps = 3/100 (3%)
 Frame = -1

Query: 292 ARFLFISQF---SHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSL 122
           AR+LF+S+     H+K  + FLWNAI+K+FSHGEDP++A ++F LML  GVC DKFSFSL
Sbjct: 68  ARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSL 127

Query: 121 VLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           VLKACSRL LIKEG+Q+  LL + E GSDVFL+N L+ +Y
Sbjct: 128 VLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLY 167


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  121 bits (304), Expect = 9e-26
 Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = -1

Query: 292 ARFLFISQF---SHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSL 122
           AR+LF+S+     H+K  + FLWNAI+K+FSHGEDP +A  +F LML  GVC DKFSFSL
Sbjct: 124 ARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSL 183

Query: 121 VLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           VLKACSRL LIKEG+Q+  LL   E GSDVFL+N L+ +Y
Sbjct: 184 VLKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLY 223


>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Citrus sinensis]
          Length = 634

 Score =  119 bits (297), Expect = 6e-25
 Identities = 58/97 (59%), Positives = 75/97 (77%)
 Frame = -1

Query: 292 ARFLFISQFSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLK 113
           AR++F    + ++  D FLWNAI+KT+SHG DPK+A+++F LML  GV  DKFS SLVLK
Sbjct: 68  ARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLK 127

Query: 112 ACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           ACSRL LI+EGLQ+  LL K  FGSD+FL+N LI++Y
Sbjct: 128 ACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLY 164


>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
           gi|557547533|gb|ESR58511.1| hypothetical protein
           CICLE_v10023562mg, partial [Citrus clementina]
          Length = 658

 Score =  119 bits (297), Expect = 6e-25
 Identities = 58/97 (59%), Positives = 75/97 (77%)
 Frame = -1

Query: 292 ARFLFISQFSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLK 113
           AR++F    + ++  D FLWNAI+KT+SHG DPK+A+++F LML  GV  DKFS SLVLK
Sbjct: 125 ARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLK 184

Query: 112 ACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           ACSRL LI+EGLQ+  LL K  FGSD+FL+N LI++Y
Sbjct: 185 ACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLY 221


>ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g45350, chloroplastic-like [Vitis vinifera]
          Length = 704

 Score =  118 bits (296), Expect = 7e-25
 Identities = 59/100 (59%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
 Frame = -1

Query: 292 ARFLFISQF---SHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSL 122
           AR+LF+S+     ++K  + F+WNAI+K+FSH EDP++  ++F LML  GVC DKFSFSL
Sbjct: 62  ARYLFMSRHFGRKYRKQDNSFIWNAIIKSFSHKEDPREVFVIFNLMLESGVCVDKFSFSL 121

Query: 121 VLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           VLKACSRL LIKEG+Q+  LL K E GSDVFL+N L+ +Y
Sbjct: 122 VLKACSRLGLIKEGMQIHGLLGKMEIGSDVFLQNCLMCLY 161


>ref|XP_002511709.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548889|gb|EEF50378.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 450

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/101 (57%), Positives = 76/101 (75%), Gaps = 4/101 (3%)
 Frame = -1

Query: 292 ARFLFISQFSH----KKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFS 125
           AR+ F ++ ++    ++  D FLWNA++KT SHG DPKQA+++F LML  GV  DKFS S
Sbjct: 45  ARYFFFTRHAYIIGAQEKEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVS 104

Query: 124 LVLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           LVLKACSRL L+KEG+Q+  LL K +FGSDVFL+N LI +Y
Sbjct: 105 LVLKACSRLGLVKEGMQIHGLLRKLKFGSDVFLQNCLIGLY 145


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/101 (57%), Positives = 76/101 (75%), Gaps = 4/101 (3%)
 Frame = -1

Query: 292 ARFLFISQFSH----KKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFS 125
           AR+ F ++ ++    ++  D FLWNA++KT SHG DPKQA+++F LML  GV  DKFS S
Sbjct: 69  ARYFFFTRHAYIIGAQEKEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVS 128

Query: 124 LVLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           LVLKACSRL L+KEG+Q+  LL K +FGSDVFL+N LI +Y
Sbjct: 129 LVLKACSRLGLVKEGMQIHGLLRKLKFGSDVFLQNCLIGLY 169


>gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]
          Length = 626

 Score =  115 bits (288), Expect = 6e-24
 Identities = 54/97 (55%), Positives = 74/97 (76%)
 Frame = -1

Query: 292 ARFLFISQFSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLK 113
           AR++F S+ +     D FLWNA++K++SHG DPKQA ++F +ML  GV  DKFSFSL+LK
Sbjct: 65  ARYVFFSRHAFGNEDDPFLWNAVIKSYSHGCDPKQAFVMFCMMLENGVRVDKFSFSLILK 124

Query: 112 ACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           AC RL L+KEGLQ+  LL+K E GSD++L+N L++ Y
Sbjct: 125 ACGRLGLVKEGLQIHGLLKKMEIGSDLYLQNGLVSWY 161


>emb|CBI29764.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  113 bits (283), Expect = 2e-23
 Identities = 54/87 (62%), Positives = 69/87 (79%)
 Frame = -1

Query: 262 HKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLKACSRLSLIKE 83
           ++K  + F+WNAI+K+FSH EDP++  ++F LML  GVC DKFSFSLVLKACSRL LIKE
Sbjct: 9   YRKQDNSFIWNAIIKSFSHKEDPREVFVIFNLMLESGVCVDKFSFSLVLKACSRLGLIKE 68

Query: 82  GLQVQSLLEKSEFGSDVFLRNSLINVY 2
           G+Q+  LL K E GSDVFL+N L+ +Y
Sbjct: 69  GMQIHGLLGKMEIGSDVFLQNCLMCLY 95


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323642|gb|EEE99034.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 643

 Score =  111 bits (278), Expect = 9e-23
 Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 7/104 (6%)
 Frame = -1

Query: 292 ARFLFIS----QFSHKKHV---DIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKF 134
           ARF+F      +F  K+     D FLWNAI+KT+SHG DPK+A+ L  LML  G   DKF
Sbjct: 69  ARFIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKF 128

Query: 133 SFSLVLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           + SLVLKACSR+ L+KEG+Q+  LL+K EFGSD+FL+N LI+ Y
Sbjct: 129 TLSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFY 172


>gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
          Length = 594

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/93 (53%), Positives = 69/93 (74%)
 Frame = -1

Query: 280 FISQFSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLKACSR 101
           ++  FS  +  D +LWNA++K++SHG DP++A+LLF LM+  GVC DKFS SLVLKACSR
Sbjct: 54  YLCSFSAGEGEDPYLWNAVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSR 113

Query: 100 LSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           L  +KEG+Q+   L K+   SD+FL+N LI +Y
Sbjct: 114 LEFLKEGMQIHGFLRKTGIWSDLFLQNCLIGLY 146


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score =  107 bits (266), Expect = 2e-21
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 3/100 (3%)
 Frame = -1

Query: 292 ARFLFISQ---FSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSL 122
           ARFLF S     S +   D FLWN IMK+FSHG DP +A  +F LML  GV  D++S S+
Sbjct: 68  ARFLFFSDDFCCSKRNKKDPFLWNVIMKSFSHGNDPYKAFQVFCLMLENGVFVDEYSLSI 127

Query: 121 VLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           VLKACSR+  +K G+QV  LL K  FGSDVFL+N LI++Y
Sbjct: 128 VLKACSRMGFVKRGMQVHGLLRKIGFGSDVFLQNCLISMY 167


>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508704332|gb|EOX96228.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 637

 Score =  104 bits (260), Expect = 1e-20
 Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = -1

Query: 292 ARFLFISQF---SHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSL 122
           AR +F +     S ++ +D FLWNA +K++SHG D KQA ++  LML  GV  D FS SL
Sbjct: 68  ARHVFFTHHAFRSPEQEMDPFLWNAAIKSYSHGRDAKQAFVMLCLMLENGVRFDTFSLSL 127

Query: 121 VLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           VLKACSRL L+KEG+QV  LL K  FGSD+FL+N LI++Y
Sbjct: 128 VLKACSRLGLMKEGMQVHGLLRKLNFGSDLFLQNCLISLY 167


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/95 (53%), Positives = 70/95 (73%)
 Frame = -1

Query: 286 FLFISQFSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLKAC 107
           F +++  S K+  D FLWNA++K++SHG + ++A ++  LML  GV  DKFS SLVLKAC
Sbjct: 73  FTYLAFRSPKQDEDPFLWNAVIKSYSHGREAQEAFIILCLMLENGVPFDKFSLSLVLKAC 132

Query: 106 SRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           S+L L+KEG+QV  LL K  FGSD+FL+N LI+ Y
Sbjct: 133 SQLGLLKEGMQVHGLLRKLNFGSDLFLQNCLISYY 167


>gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
          Length = 617

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/82 (62%), Positives = 63/82 (76%)
 Frame = -1

Query: 247 DIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLKACSRLSLIKEGLQVQ 68
           D FLWNA++K+ SHG+DPKQA+LLF LML  GV  DKFS SLVLKACSRL  +K GLQ+ 
Sbjct: 89  DPFLWNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQIH 148

Query: 67  SLLEKSEFGSDVFLRNSLINVY 2
            +L K+   SD+FL+N LI +Y
Sbjct: 149 GILRKTGLCSDLFLQNCLIGLY 170


>gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
          Length = 617

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 64/82 (78%)
 Frame = -1

Query: 247 DIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLKACSRLSLIKEGLQVQ 68
           D +LWNA++K+ SHG DP++A+LLF LML  GV  DKFS SLVLKACSRL L+KEG+Q+ 
Sbjct: 89  DXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIH 148

Query: 67  SLLEKSEFGSDVFLRNSLINVY 2
             L+K+   SD+FL+N LI +Y
Sbjct: 149 GFLKKTGLWSDLFLQNCLIGLY 170


>ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
           lyrata] gi|297327846|gb|EFH58266.1| hypothetical protein
           ARALYDRAFT_483672 [Arabidopsis lyrata subsp. lyrata]
          Length = 606

 Score =  103 bits (258), Expect = 2e-20
 Identities = 51/92 (55%), Positives = 66/92 (71%)
 Frame = -1

Query: 277 ISQFSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSLVLKACSRL 98
           +  FS  +  D FLWNA++K+ SHG+DP+QA+LLF LML  GV  DKFS SLVLKACSRL
Sbjct: 68  VCSFSPGEMEDPFLWNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRL 127

Query: 97  SLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
             +K G+Q+   L K+   SD+FL+N LI +Y
Sbjct: 128 GFVKGGMQIHGFLRKTGLWSDLFLQNCLIGLY 159


>ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum lycopersicum]
          Length = 625

 Score =  103 bits (257), Expect = 2e-20
 Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
 Frame = -1

Query: 292 ARFLFISQ---FSHKKHVDIFLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFSFSL 122
           ARFLF S     S +   D FLWN IMK+FSHG DP +A  +F LML  GV  D++S S+
Sbjct: 68  ARFLFFSADFCCSKRNIKDPFLWNVIMKSFSHGNDPHKAFQMFCLMLENGVFVDEYSISI 127

Query: 121 VLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           VLKACS++  I  G+QV  LL K  FGSDVFL+N LI++Y
Sbjct: 128 VLKACSKMGFITRGMQVHGLLRKIGFGSDVFLQNCLISMY 167


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/103 (48%), Positives = 76/103 (73%), Gaps = 6/103 (5%)
 Frame = -1

Query: 292 ARFLFISQFS----HKKHVDI--FLWNAIMKTFSHGEDPKQAVLLFYLMLCKGVCGDKFS 131
           AR++F ++++     + H+D   FLWNA++K++SHG +P +A++LF +ML  G C DKFS
Sbjct: 68  ARYVFFTRYAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFS 127

Query: 130 FSLVLKACSRLSLIKEGLQVQSLLEKSEFGSDVFLRNSLINVY 2
           FSL+LKAC+R+ L++EG Q+  LL K E GS++FL N LI +Y
Sbjct: 128 FSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMY 170